Stderr output

<core_client_version>7.20.2</core_client_version>
<![CDATA[
<stderr_txt>
01:51:36 (7673): wrapper (7.7.26015): starting
01:51:36 (7673): wrapper: running run_atlas (--nthreads 8)
[2025-06-05 01:51:36] Arguments: --nthreads 8
[2025-06-05 01:51:36] Threads: 8
[2025-06-05 01:51:36] Checking for CVMFS
[2025-06-05 01:51:37] Probing /cvmfs/atlas.cern.ch... OK
[2025-06-05 01:51:37] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-06-05 01:51:37] Running cvmfs_config stat atlas.cern.ch
[2025-06-05 01:51:38] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-06-05 01:51:38] 2.11.2.0 23867 33907 93732 146798 1 60 14147417 25165825 3136 130560 0 17634882 99.822 19073841 2046 http://s1cern-cvmfs.openhtc.io/cvmfs/atlas.cern.ch http://192.168.73.11:3128/ 1
[2025-06-05 01:51:38] CVMFS is ok
[2025-06-05 01:51:38] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-06-05 01:51:38] Checking for apptainer binary...
[2025-06-05 01:51:38] Using apptainer found in PATH at /usr/bin/apptainer
[2025-06-05 01:51:38] Running /usr/bin/apptainer --version
[2025-06-05 01:51:38] apptainer version 1.3.2-1.el7
[2025-06-05 01:51:38] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-06-05 02:22:04] cg-vwn394.simple-grid.lan
[2025-06-05 02:22:04] apptainer works
[2025-06-05 02:22:04] Set ATHENA_PROC_NUMBER=8
[2025-06-05 02:22:04] Set ATHENA_CORE_NUMBER=8
[2025-06-05 02:22:04] Starting ATLAS job with PandaID=6667931167
[2025-06-05 02:22:04] Running command: /usr/bin/apptainer exec -B /cvmfs,/var/lib/boinc/slots/7 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-06-05 08:30:44]  *** The last 200 lines of the pilot log: ***
[2025-06-05 08:30:44] 2025-06-05 05:50:31,580 | INFO     | extracted standard memory fields from prmon json
[2025-06-05 08:30:44] 2025-06-05 05:50:31,580 | WARNING  | GPU info not found in prmon json: 'gpu'
[2025-06-05 08:30:44] 2025-06-05 05:50:31,581 | WARNING  | format EVNTtoHITS has no such key: dbData
[2025-06-05 08:30:44] 2025-06-05 05:50:31,581 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2025-06-05 08:30:44] 2025-06-05 05:50:31,587 | INFO     | fitting pss+swap vs Time
[2025-06-05 08:30:44] 2025-06-05 05:50:31,588 | INFO     | sum of square deviations: 9327281860.0
[2025-06-05 08:30:44] 2025-06-05 05:50:31,591 | INFO     | sum of deviations: 101392090619.99997
[2025-06-05 08:30:44] 2025-06-05 05:50:31,592 | INFO     | mean x: 1749093073.0
[2025-06-05 08:30:44] 2025-06-05 05:50:31,592 | INFO     | mean y: 2443068.845659164
[2025-06-05 08:30:44] 2025-06-05 05:50:31,592 | INFO     | -- intersect: -19011049395.767204
[2025-06-05 08:30:44] 2025-06-05 05:50:31,592 | INFO     | intersect: -19011049395.767204
[2025-06-05 08:30:44] 2025-06-05 05:50:31,593 | INFO     | chi2: 8.824170067671384
[2025-06-05 08:30:44] 2025-06-05 05:50:31,593 | INFO     | sum of square deviations: 8884603792.5
[2025-06-05 08:30:44] 2025-06-05 05:50:31,596 | INFO     | sum of deviations: 141652184468.49997
[2025-06-05 08:30:44] 2025-06-05 05:50:31,597 | INFO     | mean x: 1749092920.5
[2025-06-05 08:30:44] 2025-06-05 05:50:31,597 | INFO     | mean y: 2456797.1209150325
[2025-06-05 08:30:44] 2025-06-05 05:50:31,597 | INFO     | -- intersect: -27884305383.131184
[2025-06-05 08:30:44] 2025-06-05 05:50:31,597 | INFO     | intersect: -27884305383.131184
[2025-06-05 08:30:44] 2025-06-05 05:50:31,597 | INFO     | chi2: 7.296296112999231
[2025-06-05 08:30:44] 2025-06-05 05:50:31,597 | INFO     | current chi2=7.296296112999231 (change=17.31464764340545 %)
[2025-06-05 08:30:44] 2025-06-05 05:50:31,597 | INFO     | right removable region: 305
[2025-06-05 08:30:44] 2025-06-05 05:50:31,598 | INFO     | sum of square deviations: 8884603792.5
[2025-06-05 08:30:44] 2025-06-05 05:50:31,601 | INFO     | sum of deviations: -7613242524.499981
[2025-06-05 08:30:44] 2025-06-05 05:50:31,601 | INFO     | mean x: 1749093225.5
[2025-06-05 08:30:44] 2025-06-05 05:50:31,601 | INFO     | mean y: 2480601.5130718956
[2025-06-05 08:30:44] 2025-06-05 05:50:31,601 | INFO     | -- intersect: 1501283613.4079251
[2025-06-05 08:30:44] 2025-06-05 05:50:31,602 | INFO     | intersect: 1501283613.4079251
[2025-06-05 08:30:44] 2025-06-05 05:50:31,602 | INFO     | chi2: 3.9464218866125
[2025-06-05 08:30:44] 2025-06-05 05:50:31,602 | INFO     | current chi2=3.9464218866125 (change=55.277132508236846 %)
[2025-06-05 08:30:44] 2025-06-05 05:50:31,603 | INFO     | sum of square deviations: 8456158550.0
[2025-06-05 08:30:44] 2025-06-05 05:50:31,605 | INFO     | sum of deviations: -75908275255.0
[2025-06-05 08:30:44] 2025-06-05 05:50:31,606 | INFO     | mean x: 1749093378.0
[2025-06-05 08:30:44] 2025-06-05 05:50:31,606 | INFO     | mean y: 2504837.6611295682
[2025-06-05 08:30:44] 2025-06-05 05:50:31,606 | INFO     | -- intersect: 15703565880.789486
[2025-06-05 08:30:44] 2025-06-05 05:50:31,606 | INFO     | intersect: 15703565880.789486
[2025-06-05 08:30:44] 2025-06-05 05:50:31,607 | INFO     | chi2: 1.9185890480686107
[2025-06-05 08:30:44] 2025-06-05 05:50:31,607 | INFO     | current chi2=1.9185890480686107 (change=51.38408656770665 %)
[2025-06-05 08:30:44] 2025-06-05 05:50:31,607 | INFO     | sum of square deviations: 8041713570.0
[2025-06-05 08:30:44] 2025-06-05 05:50:31,610 | INFO     | sum of deviations: -82214576553.50003
[2025-06-05 08:30:44] 2025-06-05 05:50:31,610 | INFO     | mean x: 1749093530.5
[2025-06-05 08:30:44] 2025-06-05 05:50:31,610 | INFO     | mean y: 2507128.1655405406
[2025-06-05 08:30:44] 2025-06-05 05:50:31,611 | INFO     | -- intersect: 17884390474.394184
[2025-06-05 08:30:44] 2025-06-05 05:50:31,611 | INFO     | intersect: 17884390474.394184
[2025-06-05 08:30:44] 2025-06-05 05:50:31,611 | INFO     | chi2: 1.8608258162200941
[2025-06-05 08:30:44] 2025-06-05 05:50:31,611 | INFO     | current chi2=1.8608258162200941 (change=3.0107141446817507 %)
[2025-06-05 08:30:44] 2025-06-05 05:50:31,611 | INFO     | left removable region: 30
[2025-06-05 08:30:44] 2025-06-05 05:50:31,612 | INFO     | sum of square deviations: 6448679050.0
[2025-06-05 08:30:44] 2025-06-05 05:50:31,614 | INFO     | sum of deviations: -12329559425.00001
[2025-06-05 08:30:44] 2025-06-05 05:50:31,614 | INFO     | mean x: 1749093805.0
[2025-06-05 08:30:44] 2025-06-05 05:50:31,615 | INFO     | mean y: 2510924.749090909
[2025-06-05 08:30:44] 2025-06-05 05:50:31,615 | INFO     | -- intersect: 3346692863.6295624
[2025-06-05 08:30:44] 2025-06-05 05:50:31,615 | INFO     | intersect: 3346692863.6295624
[2025-06-05 08:30:44] 2025-06-05 05:50:31,615 | INFO     | chi2: 0.10940127469825091
[2025-06-05 08:30:44] 2025-06-05 05:50:31,615 | INFO     | -- intersect: 3346692863.6295624
[2025-06-05 08:30:44] 2025-06-05 05:50:31,616 | INFO     | current memory leak: -1.91 B/s (using 275 data points, chi2=0.11)
[2025-06-05 08:30:44] 2025-06-05 05:50:31,617 | INFO     | ..............................
[2025-06-05 08:30:44] 2025-06-05 05:50:31,617 | INFO     | . Timing measurements:
[2025-06-05 08:30:44] 2025-06-05 05:50:31,617 | INFO     | . get job = 0 s
[2025-06-05 08:30:44] 2025-06-05 05:50:31,617 | INFO     | . initial setup = 10 s
[2025-06-05 08:30:44] 2025-06-05 05:50:31,617 | INFO     | . payload setup = 159 s
[2025-06-05 08:30:44] 2025-06-05 05:50:31,617 | INFO     | . stage-in = 0 s
[2025-06-05 08:30:44] 2025-06-05 05:50:31,617 | INFO     | . payload execution = 19066 s
[2025-06-05 08:30:44] 2025-06-05 05:50:31,617 | INFO     | . stage-out = 4 s
[2025-06-05 08:30:44] 2025-06-05 05:50:31,617 | INFO     | . log creation = 1 s
[2025-06-05 08:30:44] 2025-06-05 05:50:31,617 | INFO     | ..............................
[2025-06-05 08:30:44] 2025-06-05 05:50:31,741 | INFO     | 
[2025-06-05 08:30:44] 2025-06-05 05:50:31,742 | INFO     | job summary report
[2025-06-05 08:30:44] 2025-06-05 05:50:31,742 | INFO     | --------------------------------------------------
[2025-06-05 08:30:44] 2025-06-05 05:50:31,742 | INFO     | PanDA job id: 6667931167
[2025-06-05 08:30:44] 2025-06-05 05:50:31,742 | INFO     | task id: 44871837
[2025-06-05 08:30:44] 2025-06-05 05:50:31,742 | INFO     | errors: (none)
[2025-06-05 08:30:44] 2025-06-05 05:50:31,742 | INFO     | status: LOG_TRANSFER = DONE 
[2025-06-05 08:30:44] 2025-06-05 05:50:31,742 | INFO     | pilot state: finished 
[2025-06-05 08:30:44] 2025-06-05 05:50:31,742 | INFO     | transexitcode: 0
[2025-06-05 08:30:44] 2025-06-05 05:50:31,743 | INFO     | exeerrorcode: 0
[2025-06-05 08:30:44] 2025-06-05 05:50:31,743 | INFO     | exeerrordiag: 
[2025-06-05 08:30:44] 2025-06-05 05:50:31,743 | INFO     | exitcode: 0
[2025-06-05 08:30:44] 2025-06-05 05:50:31,743 | INFO     | exitmsg: OK
[2025-06-05 08:30:44] 2025-06-05 05:50:31,743 | INFO     | cpuconsumptiontime: 69994 s
[2025-06-05 08:30:44] 2025-06-05 05:50:31,743 | INFO     | nevents: 400
[2025-06-05 08:30:44] 2025-06-05 05:50:31,743 | INFO     | neventsw: 0
[2025-06-05 08:30:44] 2025-06-05 05:50:31,743 | INFO     | pid: 4737
[2025-06-05 08:30:44] 2025-06-05 05:50:31,743 | INFO     | pgrp: 4737
[2025-06-05 08:30:44] 2025-06-05 05:50:31,743 | INFO     | corecount: 8
[2025-06-05 08:30:44] 2025-06-05 05:50:31,743 | INFO     | event service: False
[2025-06-05 08:30:44] 2025-06-05 05:50:31,744 | INFO     | sizes: {0: 2397165, 1: 2397420, 12: 2397420, 23: 2397448, 33: 2397476, 44: 2397532, 55: 2397688, 66: 2397716, 77: 2397744, 87: 2397800, 91: 2398034, 98: 2398342, 1
[2025-06-05 08:30:44] 2025-06-05 05:50:31,744 | INFO     | --------------------------------------------------
[2025-06-05 08:30:44] 2025-06-05 05:50:31,744 | INFO     | 
[2025-06-05 08:30:44] 2025-06-05 05:50:31,744 | INFO     | executing command: ls -lF /var/lib/boinc/slots/7
[2025-06-05 08:30:44] 2025-06-05 05:50:31,773 | INFO     | queue jobs had 0 job(s) [purged]
[2025-06-05 08:30:44] 2025-06-05 05:50:31,774 | INFO     | queue payloads had 0 job(s) [purged]
[2025-06-05 08:30:44] 2025-06-05 05:50:31,774 | INFO     | queue data_in had 0 job(s) [purged]
[2025-06-05 08:30:44] 2025-06-05 05:50:31,774 | INFO     | queue data_out had 0 job(s) [purged]
[2025-06-05 08:30:44] 2025-06-05 05:50:31,774 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-06-05 08:30:44] 2025-06-05 05:50:31,774 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-06-05 08:30:44] 2025-06-05 05:50:31,774 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-06-05 08:30:44] 2025-06-05 05:50:31,774 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-06-05 08:30:44] 2025-06-05 05:50:31,774 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-06-05 08:30:44] 2025-06-05 05:50:31,774 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-06-05 08:30:44] 2025-06-05 05:50:31,774 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-06-05 08:30:44] 2025-06-05 05:50:31,774 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-06-05 08:30:44] 2025-06-05 05:50:31,775 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-06-05 08:30:44] 2025-06-05 05:50:31,775 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-06-05 08:30:44] 2025-06-05 05:50:31,775 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-06-05 08:30:44] 2025-06-05 05:50:31,775 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-06-05 08:30:44] 2025-06-05 05:50:31,775 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-06-05 08:30:44] 2025-06-05 05:50:31,775 | INFO     | queue completed_jobids has 1 job(s)
[2025-06-05 08:30:44] 2025-06-05 05:50:31,775 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-06-05 08:30:44] 2025-06-05 05:50:31,775 | INFO     | queue messages had 0 job(s) [purged]
[2025-06-05 08:30:44] 2025-06-05 05:50:31,775 | INFO     | job 6667931167 has completed (purged errors)
[2025-06-05 08:30:44] 2025-06-05 05:50:31,776 | INFO     | overall cleanup function is called
[2025-06-05 08:30:44] 2025-06-05 05:50:32,785 | INFO     | --- collectZombieJob: --- 10, [4737]
[2025-06-05 08:30:44] 2025-06-05 05:50:32,786 | INFO     | zombie collector waiting for pid 4737
[2025-06-05 08:30:44] 2025-06-05 05:50:32,786 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-06-05 08:30:44] 2025-06-05 05:50:32,786 | INFO     | collected zombie processes
[2025-06-05 08:30:44] 2025-06-05 05:50:32,786 | INFO     | will attempt to kill all subprocesses of pid=4737
[2025-06-05 08:30:44] 2025-06-05 05:50:32,891 | INFO     | process IDs to be killed: [4737] (in reverse order)
[2025-06-05 08:30:44] 2025-06-05 05:50:32,978 | WARNING  | found no corresponding commands to process id(s)
[2025-06-05 08:30:44] 2025-06-05 05:50:32,978 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-06-05 08:30:44] 2025-06-05 05:50:32,982 | INFO     | did not find any defunct processes belonging to 4737
[2025-06-05 08:30:44] 2025-06-05 05:50:32,986 | INFO     | did not find any defunct processes belonging to 4737
[2025-06-05 08:30:44] 2025-06-05 05:50:32,987 | INFO     | ready for new job
[2025-06-05 08:30:44] 2025-06-05 05:50:32,987 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-06-05 08:30:44] 2025-06-05 05:50:32,989 | INFO     | **************************************
[2025-06-05 08:30:44] 2025-06-05 05:50:32,989 | INFO     | ***  PanDA Pilot version 3.10.2.2  ***
[2025-06-05 08:30:44] 2025-06-05 05:50:32,989 | INFO     | **************************************
[2025-06-05 08:30:44] 2025-06-05 05:50:32,990 | INFO     | 
[2025-06-05 08:30:44] 2025-06-05 05:50:32,990 | INFO     | pilot is running in a VM
[2025-06-05 08:30:44] 2025-06-05 05:50:32,990 | INFO     | architecture information:
[2025-06-05 08:30:44] 2025-06-05 05:50:32,991 | INFO     | executing command: cat /etc/os-release
[2025-06-05 08:30:44] 2025-06-05 05:50:33,020 | INFO     | cat /etc/os-release:
[2025-06-05 08:30:44] NAME="CentOS Linux"
[2025-06-05 08:30:44] VERSION="7 (Core)"
[2025-06-05 08:30:44] ID="centos"
[2025-06-05 08:30:44] ID_LIKE="rhel fedora"
[2025-06-05 08:30:44] VERSION_ID="7"
[2025-06-05 08:30:44] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-06-05 08:30:44] ANSI_COLOR="0;31"
[2025-06-05 08:30:44] CPE_NAME="cpe:/o:centos:centos:7"
[2025-06-05 08:30:44] HOME_URL="https://www.centos.org/"
[2025-06-05 08:30:44] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-06-05 08:30:44] 
[2025-06-05 08:30:44] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-06-05 08:30:44] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-06-05 08:30:44] REDHAT_SUPPORT_PRODUCT="centos"
[2025-06-05 08:30:44] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-06-05 08:30:44] 
[2025-06-05 08:30:44] 2025-06-05 05:50:33,020 | INFO     | **************************************
[2025-06-05 08:30:44] 2025-06-05 05:50:33,524 | INFO     | executing command: df -mP /var/lib/boinc/slots/7
[2025-06-05 08:30:44] 2025-06-05 05:50:33,710 | INFO     | sufficient remaining disk space (497228447744 B)
[2025-06-05 08:30:44] 2025-06-05 05:50:33,711 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-06-05 08:30:44] 2025-06-05 05:50:33,711 | INFO     | current server update state: UPDATING_FINAL
[2025-06-05 08:30:44] 2025-06-05 05:50:33,711 | INFO     | update_server=False
[2025-06-05 08:30:44] 2025-06-05 05:50:33,711 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-06-05 08:30:44] 2025-06-05 05:50:33,711 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-06-05 08:30:44] 2025-06-05 05:50:33,714 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-06-05 08:30:44] 2025-06-05 05:50:34,070 | WARNING  | job monitor detected an abort_job request (signal=args.signal)
[2025-06-05 08:30:44] 2025-06-05 05:50:34,071 | WARNING  | cannot recover job monitoring - aborting pilot
[2025-06-05 08:30:44] 2025-06-05 05:50:34,071 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-06-05 08:30:44] 2025-06-05 05:50:34,071 | INFO     | will abort loop
[2025-06-05 08:30:44] 2025-06-05 05:50:34,128 | INFO     | all data control threads have been joined
[2025-06-05 08:30:44] 2025-06-05 05:50:34,289 | INFO     | found 0 job(s) in 20 queues
[2025-06-05 08:30:44] 2025-06-05 05:50:34,290 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-06-05 08:30:44] 2025-06-05 05:50:34,290 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-06-05 08:30:44] 2025-06-05 05:50:34,627 | INFO     | all payload control threads have been joined
[2025-06-05 08:30:44] 2025-06-05 05:50:34,717 | INFO     | [job] queue monitor thread has finished
[2025-06-05 08:30:44] 2025-06-05 05:50:34,718 | INFO     | [job] retrieve thread has finished
[2025-06-05 08:30:44] 2025-06-05 05:50:34,725 | INFO     | [payload] run_realtimelog thread has finished
[2025-06-05 08:30:44] 2025-06-05 05:50:34,934 | INFO     | [payload] failed_post thread has finished
[2025-06-05 08:30:44] 2025-06-05 05:50:34,950 | INFO     | all job control threads have been joined
[2025-06-05 08:30:44] 2025-06-05 05:50:35,077 | INFO     | [job] job monitor thread has finished
[2025-06-05 08:30:44] 2025-06-05 05:50:35,135 | INFO     | [data] control thread has finished
[2025-06-05 08:30:44] 2025-06-05 05:50:35,159 | INFO     | [job] validate thread has finished
[2025-06-05 08:30:44] 2025-06-05 05:50:35,478 | INFO     | [payload] execute_payloads thread has finished
[2025-06-05 08:30:44] 2025-06-05 05:50:35,530 | INFO     | [payload] validate_post thread has finished
[2025-06-05 08:30:44] 2025-06-05 05:50:35,633 | INFO     | [payload] control thread has finished
[2025-06-05 08:30:44] 2025-06-05 05:50:35,721 | INFO     | [data] copytool_out thread has finished
[2025-06-05 08:30:44] 2025-06-05 05:50:35,955 | INFO     | [job] control thread has finished
[2025-06-05 08:30:44] 2025-06-05 05:50:36,162 | INFO     | [data] copytool_in thread has finished
[2025-06-05 08:30:44] 2025-06-05 05:50:36,171 | INFO     | [job] create_data_payload thread has finished
[2025-06-05 08:30:44] 2025-06-05 05:50:36,202 | INFO     | [payload] validate_pre thread has finished
[2025-06-05 08:30:44] 2025-06-05 05:50:36,412 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-06-05 08:30:44] 2025-06-05 05:50:40,421 | INFO     | [data] queue_monitor thread has finished
[2025-06-05 08:30:44] 2025-06-05 05:50:40,678 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 139827655976768)>', '<ExcThread(monitor, started 139827064325888)>']
[2025-06-05 08:30:44] 2025-06-05 05:50:41,332 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-06-05 08:30:44] 2025-06-05 05:50:41,333 | INFO     | [monitor] control thread has ended
[2025-06-05 08:30:44] 2025-06-05 05:50:45,704 | INFO     | all workflow threads have been joined
[2025-06-05 08:30:44] 2025-06-05 05:50:45,705 | INFO     | end of generic workflow (traces error code: 0)
[2025-06-05 08:30:44] 2025-06-05 05:50:45,705 | INFO     | traces error code: 0
[2025-06-05 08:30:44] 2025-06-05 05:50:45,705 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-06-05 08:30:44] 2025-06-05 05:50:45,988 [wrapper] ==== pilot stdout END ====
[2025-06-05 08:30:44] 2025-06-05 05:50:45,998 [wrapper] ==== wrapper stdout RESUME ====
[2025-06-05 08:30:44] 2025-06-05 05:50:46,009 [wrapper] pilotpid: 28525
[2025-06-05 08:30:44] 2025-06-05 05:50:46,031 [wrapper] Pilot exit status: 0
[2025-06-05 08:30:44] 2025-06-05 05:50:46,053 [wrapper] pandaids: 6667931167
[2025-06-05 08:30:44] 2025-06-05 05:50:46,114 [wrapper] cleanup supervisor_pilot 17198 28526
[2025-06-05 08:30:44] 2025-06-05 05:50:46,120 [wrapper] Test setup, not cleaning
[2025-06-05 08:30:44] 2025-06-05 05:50:46,124 [wrapper] apfmon messages muted
[2025-06-05 08:30:44] 2025-06-05 05:50:46,128 [wrapper] ==== wrapper stdout END ====
[2025-06-05 08:30:44] 2025-06-05 05:50:46,131 [wrapper] ==== wrapper stderr END ====
[2025-06-05 08:30:44]  *** Error codes and diagnostics ***
[2025-06-05 08:30:44]     "exeErrorCode": 0,
[2025-06-05 08:30:44]     "exeErrorDiag": "",
[2025-06-05 08:30:44]     "pilotErrorCode": 0,
[2025-06-05 08:30:44]     "pilotErrorDiag": "",
[2025-06-05 08:30:44]  *** Listing of results directory ***
[2025-06-05 08:30:45] total 416332
[2025-06-05 08:30:45] -rw-r--r--. 1 boinc boinc    495897 May 28 06:31 pilot3.tar.gz
[2025-06-05 08:30:45] -rwx------. 1 boinc boinc     37140 May 28 06:50 runpilot2-wrapper.sh
[2025-06-05 08:30:45] -rw-r--r--. 1 boinc boinc      5111 May 28 06:50 queuedata.json
[2025-06-05 08:30:45] -rw-r--r--. 1 boinc boinc       100 Jun  5 01:51 wrapper_26015_x86_64-pc-linux-gnu
[2025-06-05 08:30:45] -rwxr-xr-x. 1 boinc boinc      7986 Jun  5 01:51 run_atlas
[2025-06-05 08:30:45] -rw-r--r--. 1 boinc boinc       105 Jun  5 01:51 job.xml
[2025-06-05 08:30:45] -rw-r--r--. 1 boinc boinc      6392 Jun  5 01:51 init_data.xml
[2025-06-05 08:30:45] -rw-r--r--. 2 boinc boinc 222373228 Jun  5 01:51 EVNT.44871834._003083.pool.root.1
[2025-06-05 08:30:45] -rw-r--r--. 2 boinc boinc     15093 Jun  5 01:51 start_atlas.sh
[2025-06-05 08:30:45] drwxrwx--x. 2 boinc boinc        68 Jun  5 01:51 shared
[2025-06-05 08:30:45] -rw-r--r--. 2 boinc boinc    508881 Jun  5 01:51 input.tar.gz
[2025-06-05 08:30:45] -rw-r--r--. 1 boinc boinc         0 Jun  5 01:51 boinc_lockfile
[2025-06-05 08:30:45] -rw-r--r--. 1 boinc boinc      2559 Jun  5 02:22 pandaJob.out
[2025-06-05 08:30:45] -rw-------. 1 boinc boinc    987117 Jun  5 02:25 agis_schedconf.cvmfs.json
[2025-06-05 08:30:45] drwx------. 4 boinc boinc      4096 Jun  5 02:25 pilot3
[2025-06-05 08:30:45] -rw-------. 1 boinc boinc 195946026 Jun  5 07:47 HITS.44871837._078860.pool.root.1
[2025-06-05 08:30:45] -rw-r--r--. 1 boinc boinc       531 Jun  5 07:48 boinc_task_state.xml
[2025-06-05 08:30:45] -rw-------. 1 boinc boinc      1020 Jun  5 07:48 memory_monitor_summary.json
[2025-06-05 08:30:45] -rw-------. 1 boinc boinc   1598969 Jun  5 07:49 agis_ddmendpoints.agis.ALL.json
[2025-06-05 08:30:45] -rw-------. 1 boinc boinc    439666 Jun  5 07:49 log.44871837._078860.job.log.tgz.1
[2025-06-05 08:30:45] -rw-------. 1 boinc boinc        95 Jun  5 07:49 pilot_heartbeat.json
[2025-06-05 08:30:45] -rw-------. 1 boinc boinc      7695 Jun  5 07:50 heartbeat.json
[2025-06-05 08:30:45] -rw-------. 1 boinc boinc      4602 Jun  5 07:50 pilotlog.txt
[2025-06-05 08:30:45] -rw-------. 1 boinc boinc   1653524 Jun  5 07:50 log.44871837._078860.job.log.1
[2025-06-05 08:30:45] -rw-------. 1 boinc boinc       357 Jun  5 07:50 output.list
[2025-06-05 08:30:45] -rw-r--r--. 1 boinc boinc       620 Jun  5 07:50 runtime_log
[2025-06-05 08:30:45] -rw-------. 1 boinc boinc   2109440 Jun  5 07:50 result.tar.gz
[2025-06-05 08:30:45] -rw-r--r--. 1 boinc boinc      8659 Jun  5 07:50 runtime_log.err
[2025-06-05 08:30:45] -rw-------. 1 boinc boinc       657 Jun  5 07:50 M28NDmqvNe7nsSi4ap6QjLDmwznN0nGgGQJmUXzaDmtIbKDmwuI6Xn.diag
[2025-06-05 08:30:45] -rw-r--r--. 1 boinc boinc      8192 Jun  5 08:30 boinc_mmap_file
[2025-06-05 08:30:45] -rw-r--r--. 1 boinc boinc        28 Jun  5 08:30 wrapper_checkpoint.txt
[2025-06-05 08:30:45] -rw-r--r--. 1 boinc boinc     20497 Jun  5 08:30 stderr.txt
[2025-06-05 08:30:45] HITS file was successfully produced:
[2025-06-05 08:30:45] -rw-------. 1 boinc boinc 195946026 Jun  5 07:47 shared/HITS.pool.root.1
[2025-06-05 08:30:45]  *** Contents of shared directory: ***
[2025-06-05 08:30:45] total 411096
[2025-06-05 08:30:45] -rw-r--r--. 2 boinc boinc 222373228 Jun  5 01:51 ATLAS.root_0
[2025-06-05 08:30:45] -rw-r--r--. 2 boinc boinc     15093 Jun  5 01:51 start_atlas.sh
[2025-06-05 08:30:45] -rw-r--r--. 2 boinc boinc    508881 Jun  5 01:51 input.tar.gz
[2025-06-05 08:30:45] -rw-------. 1 boinc boinc 195946026 Jun  5 07:47 HITS.pool.root.1
[2025-06-05 08:30:45] -rw-------. 1 boinc boinc   2109440 Jun  5 07:50 result.tar.gz
08:30:46 (7673): run_atlas exited; CPU time 70260.431874
08:30:46 (7673): called boinc_finish(0)

</stderr_txt>
]]>

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