Stderr output

<core_client_version>7.7.0</core_client_version>
<![CDATA[
<stderr_txt>
11:43:00 (82786): wrapper (7.7.26015): starting
11:43:00 (82786): wrapper: running run_atlas (--nthreads 8)
[2025-06-04 11:43:00] Arguments: --nthreads 8
[2025-06-04 11:43:00] Threads: 8
[2025-06-04 11:43:00] Checking for CVMFS
[2025-06-04 11:43:00] Probing /cvmfs/atlas.cern.ch... OK
[2025-06-04 11:43:00] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-06-04 11:43:00] Running cvmfs_config stat atlas.cern.ch
[2025-06-04 11:43:00] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-06-04 11:43:00] 2.11.2.0 7082 28977 202412 146786 1 193 9269095 18432001 6203 130560 0 121735605 99.595 100234477 30872 http://cvmfs-s1fnal.opensciencegrid.org:8000/cvmfs/atlas.cern.ch http://192.41.237.109:6081 1
[2025-06-04 11:43:00] CVMFS is ok
[2025-06-04 11:43:00] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-06-04 11:43:00] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2025-06-04 11:43:00] Further information can be found at the LHC@home message board.
[2025-06-04 11:43:00] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-06-04 11:43:00] Checking for apptainer binary...
[2025-06-04 11:43:00] Using apptainer found in PATH at /usr/bin/apptainer
[2025-06-04 11:43:00] Running /usr/bin/apptainer --version
[2025-06-04 11:43:00] apptainer version 1.3.2-1.el7
[2025-06-04 11:43:00] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-06-04 11:43:01] c-211-35-3.aglt2.org
[2025-06-04 11:43:01] apptainer works
[2025-06-04 11:43:01] Set ATHENA_PROC_NUMBER=8
[2025-06-04 11:43:01] Set ATHENA_CORE_NUMBER=8
[2025-06-04 11:43:01] Starting ATLAS job with PandaID=6667033589
[2025-06-04 11:43:01] Running command: /usr/bin/apptainer exec -B /cvmfs,/tmp/boinchome/slots/3 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-06-04 13:09:52]  *** The last 200 lines of the pilot log: ***
[2025-06-04 13:09:52]  lfn=log.44871837._067778.job.log.tgz.1
[2025-06-04 13:09:52]  mtime=0
[2025-06-04 13:09:52]  protocol_id=None
[2025-06-04 13:09:52]  protocols=[{'endpoint': 'davs://dav.ndgf.org:443', 'flavour': 'WEBDAV', 'id': 331, 'path': '/atlas/disk/atlasdatadisk/rucio/'}]
[2025-06-04 13:09:52]  replicas=None
[2025-06-04 13:09:52]  scope=mc23_13p6TeV
[2025-06-04 13:09:52]  status=None
[2025-06-04 13:09:52]  status_code=0
[2025-06-04 13:09:52]  storage_token=
[2025-06-04 13:09:52]  surl=/tmp/boinchome/slots/3/PanDA_Pilot-6667033589/log.44871837._067778.job.log.tgz.1
[2025-06-04 13:09:52]  turl=davs://dav.ndgf.org:443/atlas/disk/atlasdatadisk/rucio/mc23_13p6TeV/b5/3f/log.44871837._067778.job.log.tgz.1
[2025-06-04 13:09:52]  workdir=None
[2025-06-04 13:09:52] ]
[2025-06-04 13:09:52] 2025-06-04 17:09:26,345 | INFO     | transferring file log.44871837._067778.job.log.tgz.1 from /tmp/boinchome/slots/3/PanDA_Pilot-6667033589/log.44871837._067778.job.log.tgz.1 to /tmp/boinchome/slots/
[2025-06-04 13:09:52] 2025-06-04 17:09:26,345 | INFO     | executing command: /usr/bin/env mv /tmp/boinchome/slots/3/PanDA_Pilot-6667033589/log.44871837._067778.job.log.tgz.1 /tmp/boinchome/slots/3/log.44871837._067778.job
[2025-06-04 13:09:52] 2025-06-04 17:09:26,371 | INFO     | adding to output.list: log.44871837._067778.job.log.tgz.1 davs://dav.ndgf.org:443/atlas/disk/atlasdatadisk/rucio/mc23_13p6TeV/b5/3f/log.44871837._067778.job.log.tg
[2025-06-04 13:09:52] 2025-06-04 17:09:26,372 | INFO     | alt stage-out settings: ['pl', 'write_lan', 'w', 'default'], allow_altstageout=False, remain_files=0, has_altstorage=True
[2025-06-04 13:09:52] 2025-06-04 17:09:26,372 | INFO     | summary of transferred files:
[2025-06-04 13:09:52] 2025-06-04 17:09:26,372 | INFO     |  -- lfn=log.44871837._067778.job.log.tgz.1, status_code=0, status=transferred
[2025-06-04 13:09:52] 2025-06-04 17:09:26,372 | INFO     | stage-out finished correctly
[2025-06-04 13:09:52] 2025-06-04 17:09:29,757 | INFO     | finished stage-out for finished payload, adding job to finished_jobs queue
[2025-06-04 13:09:52] 2025-06-04 17:09:30,275 | INFO     | job 6667033589 has state=finished
[2025-06-04 13:09:52] 2025-06-04 17:09:30,276 | INFO     | preparing for final server update for job 6667033589 in state='finished'
[2025-06-04 13:09:52] 2025-06-04 17:09:30,276 | INFO     | this job has now completed (state=finished)
[2025-06-04 13:09:52] 2025-06-04 17:09:30,277 | INFO     | pilot will not update the server (heartbeat message will be written to file)
[2025-06-04 13:09:52] 2025-06-04 17:09:30,277 | INFO     | log transfer has been attempted: DONE
[2025-06-04 13:09:52] 2025-06-04 17:09:30,277 | INFO     | job 6667033589 has finished - writing final server update
[2025-06-04 13:09:52] 2025-06-04 17:09:30,278 | INFO     | total number of processed events: 400 (read)
[2025-06-04 13:09:52] 2025-06-04 17:09:30,287 | INFO     | executing command: lscpu
[2025-06-04 13:09:52] 2025-06-04 17:09:30,353 | INFO     | executing command: export ATLAS_LOCAL_ROOT_BASE=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase;source ${ATLAS_LOCAL_ROOT_BASE}/user/atlasLocalSetup.sh --quiet;lsetup
[2025-06-04 13:09:52] 2025-06-04 17:09:30,469 | WARNING  | process 117449 can no longer be monitored (due to stat problems) - aborting
[2025-06-04 13:09:52] 2025-06-04 17:09:30,469 | INFO     | using path: /tmp/boinchome/slots/3/PanDA_Pilot-6667033589/memory_monitor_summary.json (trf name=prmon)
[2025-06-04 13:09:52] 2025-06-04 17:09:30,598 | INFO     | number of running child processes to parent process 117449: 1
[2025-06-04 13:09:52] 2025-06-04 17:09:30,598 | INFO     | maximum number of monitored processes: 6
[2025-06-04 13:09:52] 2025-06-04 17:09:32,244 | INFO     | PID=88898 has CPU usage=8.6% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i PR 
[2025-06-04 13:09:52] 2025-06-04 17:09:32,244 | INFO     | .. there are 14 such processes running
[2025-06-04 13:09:52] 2025-06-04 17:09:33,099 | INFO     | monitor loop #387: job 0:6667033589 is in state 'finished'
[2025-06-04 13:09:52] 2025-06-04 17:09:33,100 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-06-04 13:09:52] 2025-06-04 17:09:33,377 | INFO     | CPU arch script returned: x86-64-v4
[2025-06-04 13:09:52] 2025-06-04 17:09:33,377 | INFO     | using path: /tmp/boinchome/slots/3/PanDA_Pilot-6667033589/memory_monitor_summary.json (trf name=prmon)
[2025-06-04 13:09:52] 2025-06-04 17:09:33,378 | INFO     | extracted standard info from prmon json
[2025-06-04 13:09:52] 2025-06-04 17:09:33,378 | INFO     | extracted standard memory fields from prmon json
[2025-06-04 13:09:52] 2025-06-04 17:09:33,378 | WARNING  | GPU info not found in prmon json: 'gpu'
[2025-06-04 13:09:52] 2025-06-04 17:09:33,379 | WARNING  | format EVNTtoHITS has no such key: dbData
[2025-06-04 13:09:52] 2025-06-04 17:09:33,379 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2025-06-04 13:09:52] 2025-06-04 17:09:33,381 | INFO     | fitting pss+swap vs Time
[2025-06-04 13:09:52] 2025-06-04 17:09:33,382 | INFO     | sum of square deviations: 147126479.5
[2025-06-04 13:09:52] 2025-06-04 17:09:33,382 | INFO     | sum of deviations: -416508488.0000002
[2025-06-04 13:09:52] 2025-06-04 17:09:33,382 | INFO     | mean x: 1749054463.5
[2025-06-04 13:09:52] 2025-06-04 17:09:33,383 | INFO     | mean y: 2503525.512820513
[2025-06-04 13:09:52] 2025-06-04 17:09:33,383 | INFO     | -- intersect: 4953998541.894535
[2025-06-04 13:09:52] 2025-06-04 17:09:33,383 | INFO     | intersect: 4953998541.894535
[2025-06-04 13:09:52] 2025-06-04 17:09:33,383 | INFO     | chi2: 0.002564635244120642
[2025-06-04 13:09:52] 2025-06-04 17:09:33,383 | INFO     | -- intersect: 4953998541.894535
[2025-06-04 13:09:52] 2025-06-04 17:09:33,383 | INFO     | current memory leak: -2.83 B/s (using 78 data points, chi2=0.00)
[2025-06-04 13:09:52] 2025-06-04 17:09:33,384 | INFO     | ..............................
[2025-06-04 13:09:52] 2025-06-04 17:09:33,384 | INFO     | . Timing measurements:
[2025-06-04 13:09:52] 2025-06-04 17:09:33,384 | INFO     | . get job = 0 s
[2025-06-04 13:09:52] 2025-06-04 17:09:33,384 | INFO     | . initial setup = 2 s
[2025-06-04 13:09:52] 2025-06-04 17:09:33,384 | INFO     | . payload setup = 4 s
[2025-06-04 13:09:52] 2025-06-04 17:09:33,384 | INFO     | . stage-in = 0 s
[2025-06-04 13:09:52] 2025-06-04 17:09:33,384 | INFO     | . payload execution = 5154 s
[2025-06-04 13:09:52] 2025-06-04 17:09:33,385 | INFO     | . stage-out = 0 s
[2025-06-04 13:09:52] 2025-06-04 17:09:33,385 | INFO     | . log creation = 0 s
[2025-06-04 13:09:52] 2025-06-04 17:09:33,385 | INFO     | ..............................
[2025-06-04 13:09:52] 2025-06-04 17:09:33,474 | INFO     | 
[2025-06-04 13:09:52] 2025-06-04 17:09:33,474 | INFO     | job summary report
[2025-06-04 13:09:52] 2025-06-04 17:09:33,475 | INFO     | --------------------------------------------------
[2025-06-04 13:09:52] 2025-06-04 17:09:33,475 | INFO     | PanDA job id: 6667033589
[2025-06-04 13:09:52] 2025-06-04 17:09:33,475 | INFO     | task id: 44871837
[2025-06-04 13:09:52] 2025-06-04 17:09:33,475 | INFO     | errors: (none)
[2025-06-04 13:09:52] 2025-06-04 17:09:33,475 | INFO     | status: LOG_TRANSFER = DONE 
[2025-06-04 13:09:52] 2025-06-04 17:09:33,475 | INFO     | pilot state: finished 
[2025-06-04 13:09:52] 2025-06-04 17:09:33,475 | INFO     | transexitcode: 0
[2025-06-04 13:09:52] 2025-06-04 17:09:33,475 | INFO     | exeerrorcode: 0
[2025-06-04 13:09:52] 2025-06-04 17:09:33,475 | INFO     | exeerrordiag: 
[2025-06-04 13:09:52] 2025-06-04 17:09:33,475 | INFO     | exitcode: 0
[2025-06-04 13:09:52] 2025-06-04 17:09:33,476 | INFO     | exitmsg: OK
[2025-06-04 13:09:52] 2025-06-04 17:09:33,476 | INFO     | cpuconsumptiontime: 39648 s
[2025-06-04 13:09:52] 2025-06-04 17:09:33,476 | INFO     | nevents: 400
[2025-06-04 13:09:52] 2025-06-04 17:09:33,476 | INFO     | neventsw: 0
[2025-06-04 13:09:52] 2025-06-04 17:09:33,476 | INFO     | pid: 117449
[2025-06-04 13:09:52] 2025-06-04 17:09:33,476 | INFO     | pgrp: 117449
[2025-06-04 13:09:52] 2025-06-04 17:09:33,476 | INFO     | corecount: 8
[2025-06-04 13:09:52] 2025-06-04 17:09:33,476 | INFO     | event service: False
[2025-06-04 13:09:52] 2025-06-04 17:09:33,476 | INFO     | sizes: {0: 2397165, 1: 2397420, 4: 2397626, 12: 2397654, 5162: 2423975, 5163: 2423974, 5164: 2433099, 5167: 2433155, 5171: 2433325}
[2025-06-04 13:09:52] 2025-06-04 17:09:33,476 | INFO     | --------------------------------------------------
[2025-06-04 13:09:52] 2025-06-04 17:09:33,477 | INFO     | 
[2025-06-04 13:09:52] 2025-06-04 17:09:33,477 | INFO     | executing command: ls -lF /tmp/boinchome/slots/3
[2025-06-04 13:09:52] 2025-06-04 17:09:33,502 | INFO     | queue jobs had 0 job(s) [purged]
[2025-06-04 13:09:52] 2025-06-04 17:09:33,502 | INFO     | queue payloads had 0 job(s) [purged]
[2025-06-04 13:09:52] 2025-06-04 17:09:33,502 | INFO     | queue data_in had 0 job(s) [purged]
[2025-06-04 13:09:52] 2025-06-04 17:09:33,502 | INFO     | queue data_out had 0 job(s) [purged]
[2025-06-04 13:09:52] 2025-06-04 17:09:33,502 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-06-04 13:09:52] 2025-06-04 17:09:33,502 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-06-04 13:09:52] 2025-06-04 17:09:33,502 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-06-04 13:09:52] 2025-06-04 17:09:33,502 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-06-04 13:09:52] 2025-06-04 17:09:33,503 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-06-04 13:09:52] 2025-06-04 17:09:33,503 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-06-04 13:09:52] 2025-06-04 17:09:33,503 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-06-04 13:09:52] 2025-06-04 17:09:33,503 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-06-04 13:09:52] 2025-06-04 17:09:33,503 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-06-04 13:09:52] 2025-06-04 17:09:33,503 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-06-04 13:09:52] 2025-06-04 17:09:33,503 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-06-04 13:09:52] 2025-06-04 17:09:33,503 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-06-04 13:09:52] 2025-06-04 17:09:33,503 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-06-04 13:09:52] 2025-06-04 17:09:33,503 | INFO     | queue completed_jobids has 1 job(s)
[2025-06-04 13:09:52] 2025-06-04 17:09:33,503 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-06-04 13:09:52] 2025-06-04 17:09:33,503 | INFO     | queue messages had 0 job(s) [purged]
[2025-06-04 13:09:52] 2025-06-04 17:09:33,504 | INFO     | job 6667033589 has completed (purged errors)
[2025-06-04 13:09:52] 2025-06-04 17:09:33,504 | INFO     | overall cleanup function is called
[2025-06-04 13:09:52] 2025-06-04 17:09:34,511 | INFO     | --- collectZombieJob: --- 10, [117449]
[2025-06-04 13:09:52] 2025-06-04 17:09:34,512 | INFO     | zombie collector waiting for pid 117449
[2025-06-04 13:09:52] 2025-06-04 17:09:34,512 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-06-04 13:09:52] 2025-06-04 17:09:34,512 | INFO     | collected zombie processes
[2025-06-04 13:09:52] 2025-06-04 17:09:34,512 | INFO     | will attempt to kill all subprocesses of pid=117449
[2025-06-04 13:09:52] 2025-06-04 17:09:34,664 | INFO     | process IDs to be killed: [117449] (in reverse order)
[2025-06-04 13:09:52] 2025-06-04 17:09:34,728 | WARNING  | found no corresponding commands to process id(s)
[2025-06-04 13:09:52] 2025-06-04 17:09:34,728 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-06-04 13:09:52] 2025-06-04 17:09:34,733 | INFO     | did not find any defunct processes belonging to 117449
[2025-06-04 13:09:52] 2025-06-04 17:09:34,737 | INFO     | did not find any defunct processes belonging to 117449
[2025-06-04 13:09:52] 2025-06-04 17:09:34,737 | INFO     | ready for new job
[2025-06-04 13:09:52] 2025-06-04 17:09:34,737 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-06-04 13:09:52] 2025-06-04 17:09:34,738 | INFO     | **************************************
[2025-06-04 13:09:52] 2025-06-04 17:09:34,738 | INFO     | ***  PanDA Pilot version 3.10.2.2  ***
[2025-06-04 13:09:52] 2025-06-04 17:09:34,738 | INFO     | **************************************
[2025-06-04 13:09:52] 2025-06-04 17:09:34,738 | INFO     | 
[2025-06-04 13:09:52] 2025-06-04 17:09:34,740 | INFO     | architecture information:
[2025-06-04 13:09:52] 2025-06-04 17:09:34,741 | INFO     | executing command: cat /etc/os-release
[2025-06-04 13:09:52] 2025-06-04 17:09:34,762 | INFO     | cat /etc/os-release:
[2025-06-04 13:09:52] NAME="CentOS Linux"
[2025-06-04 13:09:52] VERSION="7 (Core)"
[2025-06-04 13:09:52] ID="centos"
[2025-06-04 13:09:52] ID_LIKE="rhel fedora"
[2025-06-04 13:09:52] VERSION_ID="7"
[2025-06-04 13:09:52] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-06-04 13:09:52] ANSI_COLOR="0;31"
[2025-06-04 13:09:52] CPE_NAME="cpe:/o:centos:centos:7"
[2025-06-04 13:09:52] HOME_URL="https://www.centos.org/"
[2025-06-04 13:09:52] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-06-04 13:09:52] 
[2025-06-04 13:09:52] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-06-04 13:09:52] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-06-04 13:09:52] REDHAT_SUPPORT_PRODUCT="centos"
[2025-06-04 13:09:52] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-06-04 13:09:52] 
[2025-06-04 13:09:52] 2025-06-04 17:09:34,762 | INFO     | **************************************
[2025-06-04 13:09:52] 2025-06-04 17:09:35,265 | INFO     | executing command: df -mP /tmp/boinchome/slots/3
[2025-06-04 13:09:52] 2025-06-04 17:09:35,289 | INFO     | sufficient remaining disk space (105911418880 B)
[2025-06-04 13:09:52] 2025-06-04 17:09:35,289 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-06-04 13:09:52] 2025-06-04 17:09:35,289 | INFO     | current server update state: UPDATING_FINAL
[2025-06-04 13:09:52] 2025-06-04 17:09:35,290 | INFO     | update_server=False
[2025-06-04 13:09:52] 2025-06-04 17:09:35,290 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-06-04 13:09:52] 2025-06-04 17:09:35,290 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-06-04 13:09:52] 2025-06-04 17:09:35,290 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-06-04 13:09:52] 2025-06-04 17:09:35,303 | INFO     | all data control threads have been joined
[2025-06-04 13:09:52] 2025-06-04 17:09:35,496 | INFO     | all job control threads have been joined
[2025-06-04 13:09:52] 2025-06-04 17:09:35,603 | WARNING  | job monitor detected an abort_job request (signal=args.signal)
[2025-06-04 13:09:52] 2025-06-04 17:09:35,604 | WARNING  | cannot recover job monitoring - aborting pilot
[2025-06-04 13:09:52] 2025-06-04 17:09:35,604 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-06-04 13:09:52] 2025-06-04 17:09:35,604 | INFO     | will abort loop
[2025-06-04 13:09:52] 2025-06-04 17:09:35,805 | INFO     | all payload control threads have been joined
[2025-06-04 13:09:52] 2025-06-04 17:09:35,858 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-06-04 13:09:52] 2025-06-04 17:09:36,257 | INFO     | found 0 job(s) in 20 queues
[2025-06-04 13:09:52] 2025-06-04 17:09:36,257 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-06-04 13:09:52] 2025-06-04 17:09:36,257 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-06-04 13:09:52] 2025-06-04 17:09:36,293 | INFO     | [job] queue monitor thread has finished
[2025-06-04 13:09:52] 2025-06-04 17:09:36,295 | INFO     | [job] retrieve thread has finished
[2025-06-04 13:09:52] 2025-06-04 17:09:36,309 | INFO     | [data] control thread has finished
[2025-06-04 13:09:52] 2025-06-04 17:09:36,465 | INFO     | [payload] execute_payloads thread has finished
[2025-06-04 13:09:52] 2025-06-04 17:09:36,500 | INFO     | [job] control thread has finished
[2025-06-04 13:09:52] 2025-06-04 17:09:36,516 | INFO     | [data] copytool_in thread has finished
[2025-06-04 13:09:52] 2025-06-04 17:09:36,609 | INFO     | [job] job monitor thread has finished
[2025-06-04 13:09:52] 2025-06-04 17:09:36,811 | INFO     | [payload] control thread has finished
[2025-06-04 13:09:52] 2025-06-04 17:09:36,963 | INFO     | [job] validate thread has finished
[2025-06-04 13:09:52] 2025-06-04 17:09:37,275 | INFO     | [job] create_data_payload thread has finished
[2025-06-04 13:09:52] 2025-06-04 17:09:37,300 | INFO     | [data] copytool_out thread has finished
[2025-06-04 13:09:52] 2025-06-04 17:09:37,403 | INFO     | [payload] failed_post thread has finished
[2025-06-04 13:09:52] 2025-06-04 17:09:37,783 | INFO     | [payload] validate_pre thread has finished
[2025-06-04 13:09:52] 2025-06-04 17:09:37,786 | INFO     | [payload] validate_post thread has finished
[2025-06-04 13:09:52] 2025-06-04 17:09:39,864 | INFO     | [data] queue_monitor thread has finished
[2025-06-04 13:09:52] 2025-06-04 17:09:45,811 | INFO     | job.realtimelogging is not enabled
[2025-06-04 13:09:52] 2025-06-04 17:09:46,817 | INFO     | [payload] run_realtimelog thread has finished
[2025-06-04 13:09:52] 2025-06-04 17:09:47,007 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140091373016896)>', '<ExcThread(monitor, started 140090944771840)>']
[2025-06-04 13:09:52] 2025-06-04 17:09:47,310 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-06-04 13:09:52] 2025-06-04 17:09:47,310 | INFO     | [monitor] control thread has ended
[2025-06-04 13:09:52] 2025-06-04 17:09:52,030 | INFO     | all workflow threads have been joined
[2025-06-04 13:09:52] 2025-06-04 17:09:52,030 | INFO     | end of generic workflow (traces error code: 0)
[2025-06-04 13:09:52] 2025-06-04 17:09:52,031 | INFO     | traces error code: 0
[2025-06-04 13:09:52] 2025-06-04 17:09:52,031 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-06-04 13:09:52] 2025-06-04 17:09:52,157 [wrapper] ==== pilot stdout END ====
[2025-06-04 13:09:52] 2025-06-04 17:09:52,161 [wrapper] ==== wrapper stdout RESUME ====
[2025-06-04 13:09:52] 2025-06-04 17:09:52,165 [wrapper] pilotpid: 88898
[2025-06-04 13:09:52] 2025-06-04 17:09:52,169 [wrapper] Pilot exit status: 0
[2025-06-04 13:09:52] 2025-06-04 17:09:52,181 [wrapper] pandaids: 6667033589
[2025-06-04 13:09:52] 2025-06-04 17:09:52,247 [wrapper] cleanup supervisor_pilot 278769 88899
[2025-06-04 13:09:52] 2025-06-04 17:09:52,251 [wrapper] Test setup, not cleaning
[2025-06-04 13:09:52] 2025-06-04 17:09:52,255 [wrapper] apfmon messages muted
[2025-06-04 13:09:52] 2025-06-04 17:09:52,257 [wrapper] ==== wrapper stdout END ====
[2025-06-04 13:09:52] 2025-06-04 17:09:52,260 [wrapper] ==== wrapper stderr END ====
[2025-06-04 13:09:52]  *** Error codes and diagnostics ***
[2025-06-04 13:09:52]     "exeErrorCode": 0,
[2025-06-04 13:09:52]     "exeErrorDiag": "",
[2025-06-04 13:09:52]     "pilotErrorCode": 0,
[2025-06-04 13:09:52]     "pilotErrorDiag": "",
[2025-06-04 13:09:52]  *** Listing of results directory ***
[2025-06-04 13:09:52] total 420728
[2025-06-04 13:09:52] -rw-r--r-- 1 boincer umatlas    495897 May 27 08:18 pilot3.tar.gz
[2025-06-04 13:09:52] -rw-r--r-- 1 boincer umatlas      5111 May 27 09:03 queuedata.json
[2025-06-04 13:09:52] -rwx------ 1 boincer umatlas     37140 May 27 09:04 runpilot2-wrapper.sh
[2025-06-04 13:09:52] -rw-r--r-- 1 boincer umatlas       100 Jun  4 11:42 wrapper_26015_x86_64-pc-linux-gnu
[2025-06-04 13:09:52] -rwxr-xr-x 1 boincer umatlas      7986 Jun  4 11:42 run_atlas
[2025-06-04 13:09:52] -rw-r--r-- 1 boincer umatlas       105 Jun  4 11:42 job.xml
[2025-06-04 13:09:52] -rw-r--r-- 2 boincer umatlas 227322494 Jun  4 11:43 EVNT.44871834._002667.pool.root.1
[2025-06-04 13:09:52] -rw-r--r-- 2 boincer umatlas     15093 Jun  4 11:43 start_atlas.sh
[2025-06-04 13:09:52] drwxrwx--x 2 boincer umatlas      4096 Jun  4 11:43 shared
[2025-06-04 13:09:52] -rw-r--r-- 2 boincer umatlas    508881 Jun  4 11:43 input.tar.gz
[2025-06-04 13:09:52] -rw-r--r-- 1 boincer umatlas         0 Jun  4 11:43 boinc_lockfile
[2025-06-04 13:09:52] -rw-r--r-- 1 boincer umatlas      2559 Jun  4 11:43 pandaJob.out
[2025-06-04 13:09:52] -rw------- 1 boincer umatlas    990989 Jun  4 11:43 agis_schedconf.cvmfs.json
[2025-06-04 13:09:52] -rw------- 1 boincer umatlas   1598969 Jun  4 11:43 agis_ddmendpoints.agis.ALL.json
[2025-06-04 13:09:52] drwx------ 4 boincer umatlas      4096 Jun  4 11:43 pilot3
[2025-06-04 13:09:52] -rw------- 1 boincer umatlas 198062132 Jun  4 13:09 HITS.44871837._067778.pool.root.1
[2025-06-04 13:09:52] -rw-r--r-- 1 boincer umatlas       529 Jun  4 13:09 boinc_task_state.xml
[2025-06-04 13:09:52] -rw-r--r-- 1 boincer umatlas      6299 Jun  4 13:09 init_data.xml
[2025-06-04 13:09:52] -rw------- 1 boincer umatlas      1049 Jun  4 13:09 memory_monitor_summary.json
[2025-06-04 13:09:52] -rw------- 1 boincer umatlas    298876 Jun  4 13:09 log.44871837._067778.job.log.tgz.1
[2025-06-04 13:09:52] -rw------- 1 boincer umatlas        95 Jun  4 13:09 pilot_heartbeat.json
[2025-06-04 13:09:52] -rw------- 1 boincer umatlas      7740 Jun  4 13:09 heartbeat.json
[2025-06-04 13:09:52] -rw-r--r-- 1 boincer umatlas        27 Jun  4 13:09 wrapper_checkpoint.txt
[2025-06-04 13:09:52] -rw-r--r-- 1 boincer umatlas      8192 Jun  4 13:09 boinc_mmap_file
[2025-06-04 13:09:52] -rw------- 1 boincer umatlas      4612 Jun  4 13:09 pilotlog.txt
[2025-06-04 13:09:52] -rw------- 1 boincer umatlas    504202 Jun  4 13:09 log.44871837._067778.job.log.1
[2025-06-04 13:09:52] -rw------- 1 boincer umatlas       357 Jun  4 13:09 output.list
[2025-06-04 13:09:52] -rw-r--r-- 1 boincer umatlas       620 Jun  4 13:09 runtime_log
[2025-06-04 13:09:52] -rw------- 1 boincer umatlas    819200 Jun  4 13:09 result.tar.gz
[2025-06-04 13:09:52] -rw-r--r-- 1 boincer umatlas      8669 Jun  4 13:09 runtime_log.err
[2025-06-04 13:09:52] -rw------- 1 boincer umatlas       658 Jun  4 13:09 QimNDm298d7nsSi4ap6QjLDmwznN0nGgGQJmUXzaDmNUZKDmF3B1Gm.diag
[2025-06-04 13:09:52] -rw-r--r-- 1 boincer umatlas     21630 Jun  4 13:09 stderr.txt
[2025-06-04 13:09:52] HITS file was successfully produced:
[2025-06-04 13:09:52] -rw------- 1 boincer umatlas 198062132 Jun  4 13:09 shared/HITS.pool.root.1
[2025-06-04 13:09:52]  *** Contents of shared directory: ***
[2025-06-04 13:09:52] total 416744
[2025-06-04 13:09:52] -rw-r--r-- 2 boincer umatlas 227322494 Jun  4 11:43 ATLAS.root_0
[2025-06-04 13:09:52] -rw-r--r-- 2 boincer umatlas     15093 Jun  4 11:43 start_atlas.sh
[2025-06-04 13:09:52] -rw-r--r-- 2 boincer umatlas    508881 Jun  4 11:43 input.tar.gz
[2025-06-04 13:09:52] -rw------- 1 boincer umatlas 198062132 Jun  4 13:09 HITS.pool.root.1
[2025-06-04 13:09:52] -rw------- 1 boincer umatlas    819200 Jun  4 13:09 result.tar.gz
13:09:53 (82786): run_atlas exited; CPU time 39767.746589
13:09:53 (82786): called boinc_finish(0)

</stderr_txt>
]]>

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