Stderr output

<core_client_version>7.20.2</core_client_version>
<![CDATA[
<stderr_txt>
01:37:47 (1247): wrapper (7.7.26015): starting
01:37:47 (1247): wrapper: running run_atlas (--nthreads 8)
[2025-06-05 01:37:47] Arguments: --nthreads 8
[2025-06-05 01:37:47] Threads: 8
[2025-06-05 01:37:47] Checking for CVMFS
[2025-06-05 01:37:47] Probing /cvmfs/atlas.cern.ch... OK
[2025-06-05 01:37:47] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-06-05 01:37:47] Running cvmfs_config stat atlas.cern.ch
[2025-06-05 01:37:48] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-06-05 01:37:48] 2.11.2.0 13961 33900 90596 146798 1 245 13449313 25165825 3632 130560 0 17372015 99.773 20094561 2357 http://s1cern-cvmfs.openhtc.io/cvmfs/atlas.cern.ch http://192.168.73.11:3128/ 1
[2025-06-05 01:37:48] CVMFS is ok
[2025-06-05 01:37:48] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-06-05 01:37:48] Checking for apptainer binary...
[2025-06-05 01:37:48] Using apptainer found in PATH at /usr/bin/apptainer
[2025-06-05 01:37:48] Running /usr/bin/apptainer --version
[2025-06-05 01:37:48] apptainer version 1.3.2-1.el7
[2025-06-05 01:37:48] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-06-05 01:37:49] cg-vwn452.simple-grid.lan
[2025-06-05 01:37:49] apptainer works
[2025-06-05 01:37:49] Set ATHENA_PROC_NUMBER=8
[2025-06-05 01:37:49] Set ATHENA_CORE_NUMBER=8
[2025-06-05 01:37:49] Starting ATLAS job with PandaID=6678363818
[2025-06-05 01:37:49] Running command: /usr/bin/apptainer exec -B /cvmfs,/var/lib/boinc/slots/6 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-06-05 06:48:18]  *** The last 200 lines of the pilot log: ***
[2025-06-05 06:48:18] 2025-06-05 03:29:33,427 | INFO     | monitor loop #966: job 0:6678363818 is in state 'finished'
[2025-06-05 06:48:18] 2025-06-05 03:29:33,427 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-06-05 06:48:18] 2025-06-05 03:29:35,932 | INFO     | monitor loop #967: job 0:6678363818 is in state 'finished'
[2025-06-05 06:48:18] 2025-06-05 03:29:35,932 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-06-05 06:48:18] 2025-06-05 03:29:36,810 | INFO     | CPU arch script returned: x86-64-v3
[2025-06-05 06:48:18] 2025-06-05 03:29:36,810 | INFO     | using path: /var/lib/boinc/slots/6/PanDA_Pilot-6678363818/memory_monitor_summary.json (trf name=prmon)
[2025-06-05 06:48:18] 2025-06-05 03:29:36,811 | INFO     | extracted standard info from prmon json
[2025-06-05 06:48:18] 2025-06-05 03:29:36,811 | INFO     | extracted standard memory fields from prmon json
[2025-06-05 06:48:18] 2025-06-05 03:29:36,811 | WARNING  | GPU info not found in prmon json: 'gpu'
[2025-06-05 06:48:18] 2025-06-05 03:29:36,812 | WARNING  | format EVNTtoHITS has no such key: dbData
[2025-06-05 06:48:18] 2025-06-05 03:29:36,812 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2025-06-05 06:48:18] 2025-06-05 03:29:36,817 | INFO     | fitting pss+swap vs Time
[2025-06-05 06:48:18] 2025-06-05 03:29:36,818 | INFO     | sum of square deviations: 3531973200.0
[2025-06-05 06:48:18] 2025-06-05 03:29:36,819 | INFO     | sum of deviations: 3431328567.999995
[2025-06-05 06:48:18] 2025-06-05 03:29:36,820 | INFO     | mean x: 1749087188.0
[2025-06-05 06:48:18] 2025-06-05 03:29:36,820 | INFO     | mean y: 2502700.262222222
[2025-06-05 06:48:18] 2025-06-05 03:29:36,820 | INFO     | -- intersect: -1696743725.5337543
[2025-06-05 06:48:18] 2025-06-05 03:29:36,820 | INFO     | intersect: -1696743725.5337543
[2025-06-05 06:48:18] 2025-06-05 03:29:36,820 | INFO     | chi2: 1.8182935374740283
[2025-06-05 06:48:18] 2025-06-05 03:29:36,821 | INFO     | sum of square deviations: 3301699115.0
[2025-06-05 06:48:18] 2025-06-05 03:29:36,822 | INFO     | sum of deviations: 3139642549.999995
[2025-06-05 06:48:18] 2025-06-05 03:29:36,823 | INFO     | mean x: 1749087035.5
[2025-06-05 06:48:18] 2025-06-05 03:29:36,823 | INFO     | mean y: 2502509.518181818
[2025-06-05 06:48:18] 2025-06-05 03:29:36,823 | INFO     | -- intersect: -1660734475.1484697
[2025-06-05 06:48:18] 2025-06-05 03:29:36,823 | INFO     | intersect: -1660734475.1484697
[2025-06-05 06:48:18] 2025-06-05 03:29:36,823 | INFO     | chi2: 1.8180433405185121
[2025-06-05 06:48:18] 2025-06-05 03:29:36,823 | INFO     | current chi2=1.8180433405185121 (change=0.013759987062582612 %)
[2025-06-05 06:48:18] 2025-06-05 03:29:36,824 | INFO     | right removable region: 219
[2025-06-05 06:48:18] 2025-06-05 03:29:36,824 | INFO     | sum of square deviations: 3301699115.0
[2025-06-05 06:48:18] 2025-06-05 03:29:36,826 | INFO     | sum of deviations: -34826864931.999985
[2025-06-05 06:48:18] 2025-06-05 03:29:36,826 | INFO     | mean x: 1749087340.5
[2025-06-05 06:48:18] 2025-06-05 03:29:36,826 | INFO     | mean y: 2527817.0545454547
[2025-06-05 06:48:18] 2025-06-05 03:29:36,826 | INFO     | -- intersect: 18452188564.492027
[2025-06-05 06:48:18] 2025-06-05 03:29:36,826 | INFO     | intersect: 18452188564.492027
[2025-06-05 06:48:18] 2025-06-05 03:29:36,827 | INFO     | chi2: 0.20164528438974244
[2025-06-05 06:48:18] 2025-06-05 03:29:36,827 | INFO     | current chi2=0.20164528438974244 (change=88.91019077866449 %)
[2025-06-05 06:48:18] 2025-06-05 03:29:36,827 | INFO     | sum of square deviations: 3081657780.0
[2025-06-05 06:48:18] 2025-06-05 03:29:36,829 | INFO     | sum of deviations: -32935072786.0
[2025-06-05 06:48:18] 2025-06-05 03:29:36,829 | INFO     | mean x: 1749087493.0
[2025-06-05 06:48:18] 2025-06-05 03:29:36,829 | INFO     | mean y: 2526468.7395348838
[2025-06-05 06:48:18] 2025-06-05 03:29:36,829 | INFO     | -- intersect: 18695816899.916897
[2025-06-05 06:48:18] 2025-06-05 03:29:36,829 | INFO     | intersect: 18695816899.916897
[2025-06-05 06:48:18] 2025-06-05 03:29:36,830 | INFO     | chi2: 0.18706581864847813
[2025-06-05 06:48:18] 2025-06-05 03:29:36,830 | INFO     | current chi2=0.18706581864847813 (change=7.230253752468095 %)
[2025-06-05 06:48:18] 2025-06-05 03:29:36,830 | INFO     | left removable region: 20
[2025-06-05 06:48:18] 2025-06-05 03:29:36,830 | INFO     | sum of square deviations: 2443580700.0
[2025-06-05 06:48:18] 2025-06-05 03:29:36,832 | INFO     | sum of deviations: -18728628272.999996
[2025-06-05 06:48:18] 2025-06-05 03:29:36,832 | INFO     | mean x: 1749087615.0
[2025-06-05 06:48:18] 2025-06-05 03:29:36,832 | INFO     | mean y: 2516233.432160804
[2025-06-05 06:48:18] 2025-06-05 03:29:36,832 | INFO     | -- intersect: 13408257962.462486
[2025-06-05 06:48:18] 2025-06-05 03:29:36,832 | INFO     | intersect: 13408257962.462486
[2025-06-05 06:48:18] 2025-06-05 03:29:36,833 | INFO     | chi2: 0.14821226941403245
[2025-06-05 06:48:18] 2025-06-05 03:29:36,833 | INFO     | -- intersect: 13408257962.462486
[2025-06-05 06:48:18] 2025-06-05 03:29:36,833 | INFO     | current memory leak: -7.66 B/s (using 199 data points, chi2=0.15)
[2025-06-05 06:48:18] 2025-06-05 03:29:36,834 | INFO     | ..............................
[2025-06-05 06:48:18] 2025-06-05 03:29:36,834 | INFO     | . Timing measurements:
[2025-06-05 06:48:18] 2025-06-05 03:29:36,834 | INFO     | . get job = 0 s
[2025-06-05 06:48:18] 2025-06-05 03:29:36,834 | INFO     | . initial setup = 2 s
[2025-06-05 06:48:18] 2025-06-05 03:29:36,834 | INFO     | . payload setup = 16 s
[2025-06-05 06:48:18] 2025-06-05 03:29:36,834 | INFO     | . stage-in = 0 s
[2025-06-05 06:48:18] 2025-06-05 03:29:36,834 | INFO     | . payload execution = 13744 s
[2025-06-05 06:48:18] 2025-06-05 03:29:36,835 | INFO     | . stage-out = 3 s
[2025-06-05 06:48:18] 2025-06-05 03:29:36,835 | INFO     | . log creation = 0 s
[2025-06-05 06:48:18] 2025-06-05 03:29:36,835 | INFO     | ..............................
[2025-06-05 06:48:18] 2025-06-05 03:29:36,988 | INFO     | 
[2025-06-05 06:48:18] 2025-06-05 03:29:36,989 | INFO     | job summary report
[2025-06-05 06:48:18] 2025-06-05 03:29:36,989 | INFO     | --------------------------------------------------
[2025-06-05 06:48:18] 2025-06-05 03:29:36,989 | INFO     | PanDA job id: 6678363818
[2025-06-05 06:48:18] 2025-06-05 03:29:36,989 | INFO     | task id: 45006595
[2025-06-05 06:48:18] 2025-06-05 03:29:36,989 | INFO     | errors: (none)
[2025-06-05 06:48:18] 2025-06-05 03:29:36,989 | INFO     | status: LOG_TRANSFER = DONE 
[2025-06-05 06:48:18] 2025-06-05 03:29:36,989 | INFO     | pilot state: finished 
[2025-06-05 06:48:18] 2025-06-05 03:29:36,989 | INFO     | transexitcode: 0
[2025-06-05 06:48:18] 2025-06-05 03:29:36,989 | INFO     | exeerrorcode: 0
[2025-06-05 06:48:18] 2025-06-05 03:29:36,989 | INFO     | exeerrordiag: 
[2025-06-05 06:48:18] 2025-06-05 03:29:36,990 | INFO     | exitcode: 0
[2025-06-05 06:48:18] 2025-06-05 03:29:36,990 | INFO     | exitmsg: OK
[2025-06-05 06:48:18] 2025-06-05 03:29:36,990 | INFO     | cpuconsumptiontime: 51307 s
[2025-06-05 06:48:18] 2025-06-05 03:29:36,990 | INFO     | nevents: 400
[2025-06-05 06:48:18] 2025-06-05 03:29:36,990 | INFO     | neventsw: 0
[2025-06-05 06:48:18] 2025-06-05 03:29:36,990 | INFO     | pid: 13454
[2025-06-05 06:48:18] 2025-06-05 03:29:36,990 | INFO     | pgrp: 13454
[2025-06-05 06:48:18] 2025-06-05 03:29:36,990 | INFO     | corecount: 8
[2025-06-05 06:48:18] 2025-06-05 03:29:36,990 | INFO     | event service: False
[2025-06-05 06:48:18] 2025-06-05 03:29:36,990 | INFO     | sizes: {0: 2397171, 1: 2397370, 10: 2397576, 12: 2397604, 13765: 2427359, 13770: 2436300, 13773: 2436484, 13866: 2436654}
[2025-06-05 06:48:18] 2025-06-05 03:29:36,990 | INFO     | --------------------------------------------------
[2025-06-05 06:48:18] 2025-06-05 03:29:36,990 | INFO     | 
[2025-06-05 06:48:18] 2025-06-05 03:29:36,991 | INFO     | executing command: ls -lF /var/lib/boinc/slots/6
[2025-06-05 06:48:18] 2025-06-05 03:29:37,572 | INFO     | queue jobs had 0 job(s) [purged]
[2025-06-05 06:48:18] 2025-06-05 03:29:37,572 | INFO     | queue payloads had 0 job(s) [purged]
[2025-06-05 06:48:18] 2025-06-05 03:29:37,572 | INFO     | queue data_in had 0 job(s) [purged]
[2025-06-05 06:48:18] 2025-06-05 03:29:37,572 | INFO     | queue data_out had 0 job(s) [purged]
[2025-06-05 06:48:18] 2025-06-05 03:29:37,572 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-06-05 06:48:18] 2025-06-05 03:29:37,573 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-06-05 06:48:18] 2025-06-05 03:29:37,573 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-06-05 06:48:18] 2025-06-05 03:29:37,573 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-06-05 06:48:18] 2025-06-05 03:29:37,573 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-06-05 06:48:18] 2025-06-05 03:29:37,573 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-06-05 06:48:18] 2025-06-05 03:29:37,573 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-06-05 06:48:18] 2025-06-05 03:29:37,573 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-06-05 06:48:18] 2025-06-05 03:29:37,573 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-06-05 06:48:18] 2025-06-05 03:29:37,573 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-06-05 06:48:18] 2025-06-05 03:29:37,573 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-06-05 06:48:18] 2025-06-05 03:29:37,573 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-06-05 06:48:18] 2025-06-05 03:29:37,574 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-06-05 06:48:18] 2025-06-05 03:29:37,574 | INFO     | queue completed_jobids has 1 job(s)
[2025-06-05 06:48:18] 2025-06-05 03:29:37,574 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-06-05 06:48:18] 2025-06-05 03:29:37,574 | INFO     | queue messages had 0 job(s) [purged]
[2025-06-05 06:48:18] 2025-06-05 03:29:37,574 | INFO     | job 6678363818 has completed (purged errors)
[2025-06-05 06:48:18] 2025-06-05 03:29:37,574 | INFO     | overall cleanup function is called
[2025-06-05 06:48:18] 2025-06-05 03:29:37,583 | INFO     | PID=4922 has CPU usage=1.8% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i PR -
[2025-06-05 06:48:18] 2025-06-05 03:29:37,583 | INFO     | .. there are 9 such processes running
[2025-06-05 06:48:18] 2025-06-05 03:29:38,597 | INFO     | --- collectZombieJob: --- 10, [13454]
[2025-06-05 06:48:18] 2025-06-05 03:29:38,597 | INFO     | zombie collector waiting for pid 13454
[2025-06-05 06:48:18] 2025-06-05 03:29:38,597 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-06-05 06:48:18] 2025-06-05 03:29:38,597 | INFO     | collected zombie processes
[2025-06-05 06:48:18] 2025-06-05 03:29:38,598 | INFO     | will attempt to kill all subprocesses of pid=13454
[2025-06-05 06:48:18] 2025-06-05 03:29:38,695 | INFO     | process IDs to be killed: [13454] (in reverse order)
[2025-06-05 06:48:18] 2025-06-05 03:29:39,308 | WARNING  | found no corresponding commands to process id(s)
[2025-06-05 06:48:18] 2025-06-05 03:29:39,308 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-06-05 06:48:18] 2025-06-05 03:29:39,312 | INFO     | did not find any defunct processes belonging to 13454
[2025-06-05 06:48:18] 2025-06-05 03:29:39,316 | INFO     | did not find any defunct processes belonging to 13454
[2025-06-05 06:48:18] 2025-06-05 03:29:39,317 | INFO     | ready for new job
[2025-06-05 06:48:18] 2025-06-05 03:29:39,317 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-06-05 06:48:18] 2025-06-05 03:29:39,319 | INFO     | **************************************
[2025-06-05 06:48:18] 2025-06-05 03:29:39,319 | INFO     | ***  PanDA Pilot version 3.10.2.2  ***
[2025-06-05 06:48:18] 2025-06-05 03:29:39,319 | INFO     | **************************************
[2025-06-05 06:48:18] 2025-06-05 03:29:39,320 | INFO     | 
[2025-06-05 06:48:18] 2025-06-05 03:29:39,320 | INFO     | pilot is running in a VM
[2025-06-05 06:48:18] 2025-06-05 03:29:39,320 | INFO     | architecture information:
[2025-06-05 06:48:18] 2025-06-05 03:29:39,323 | INFO     | executing command: cat /etc/os-release
[2025-06-05 06:48:18] 2025-06-05 03:29:39,533 | INFO     | cat /etc/os-release:
[2025-06-05 06:48:18] NAME="CentOS Linux"
[2025-06-05 06:48:18] VERSION="7 (Core)"
[2025-06-05 06:48:18] ID="centos"
[2025-06-05 06:48:18] ID_LIKE="rhel fedora"
[2025-06-05 06:48:18] VERSION_ID="7"
[2025-06-05 06:48:18] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-06-05 06:48:18] ANSI_COLOR="0;31"
[2025-06-05 06:48:18] CPE_NAME="cpe:/o:centos:centos:7"
[2025-06-05 06:48:18] HOME_URL="https://www.centos.org/"
[2025-06-05 06:48:18] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-06-05 06:48:18] 
[2025-06-05 06:48:18] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-06-05 06:48:18] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-06-05 06:48:18] REDHAT_SUPPORT_PRODUCT="centos"
[2025-06-05 06:48:18] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-06-05 06:48:18] 
[2025-06-05 06:48:18] 2025-06-05 03:29:39,533 | INFO     | **************************************
[2025-06-05 06:48:18] 2025-06-05 03:29:40,037 | INFO     | executing command: df -mP /var/lib/boinc/slots/6
[2025-06-05 06:48:18] 2025-06-05 03:29:40,265 | INFO     | sufficient remaining disk space (497109958656 B)
[2025-06-05 06:48:18] 2025-06-05 03:29:40,266 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-06-05 06:48:18] 2025-06-05 03:29:40,266 | INFO     | current server update state: UPDATING_FINAL
[2025-06-05 06:48:18] 2025-06-05 03:29:40,266 | INFO     | update_server=False
[2025-06-05 06:48:18] 2025-06-05 03:29:40,266 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-06-05 06:48:18] 2025-06-05 03:29:40,267 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-06-05 06:48:18] 2025-06-05 03:29:40,268 | INFO     | aborting loop
[2025-06-05 06:48:18] 2025-06-05 03:29:40,272 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-06-05 06:48:18] 2025-06-05 03:29:40,272 | WARNING  | aborting monitor loop since graceful_stop has been set (timing out remaining threads)
[2025-06-05 06:48:18] 2025-06-05 03:29:40,273 | INFO     | found 0 job(s) in 20 queues
[2025-06-05 06:48:18] 2025-06-05 03:29:40,273 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-06-05 06:48:18] 2025-06-05 03:29:40,273 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-06-05 06:48:18] 2025-06-05 03:29:40,322 | INFO     | all data control threads have been joined
[2025-06-05 06:48:18] 2025-06-05 03:29:40,393 | INFO     | all job control threads have been joined
[2025-06-05 06:48:18] 2025-06-05 03:29:40,766 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-06-05 06:48:18] 2025-06-05 03:29:41,272 | INFO     | [job] retrieve thread has finished
[2025-06-05 06:48:18] 2025-06-05 03:29:41,279 | INFO     | [job] job monitor thread has finished
[2025-06-05 06:48:18] 2025-06-05 03:29:41,328 | INFO     | [data] control thread has finished
[2025-06-05 06:48:18] 2025-06-05 03:29:41,329 | INFO     | [payload] execute_payloads thread has finished
[2025-06-05 06:48:18] 2025-06-05 03:29:41,398 | INFO     | [job] control thread has finished
[2025-06-05 06:48:18] 2025-06-05 03:29:41,542 | INFO     | [payload] failed_post thread has finished
[2025-06-05 06:48:18] 2025-06-05 03:29:41,699 | INFO     | all payload control threads have been joined
[2025-06-05 06:48:18] 2025-06-05 03:29:41,737 | INFO     | [job] validate thread has finished
[2025-06-05 06:48:18] 2025-06-05 03:29:41,861 | INFO     | [data] copytool_in thread has finished
[2025-06-05 06:48:18] 2025-06-05 03:29:41,876 | INFO     | [payload] run_realtimelog thread has finished
[2025-06-05 06:48:18] 2025-06-05 03:29:41,879 | INFO     | [payload] validate_pre thread has finished
[2025-06-05 06:48:18] 2025-06-05 03:29:41,882 | INFO     | [job] create_data_payload thread has finished
[2025-06-05 06:48:18] 2025-06-05 03:29:42,003 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-06-05 06:48:18] 2025-06-05 03:29:42,115 | INFO     | [payload] validate_post thread has finished
[2025-06-05 06:48:18] 2025-06-05 03:29:42,282 | INFO     | [data] copytool_out thread has finished
[2025-06-05 06:48:18] 2025-06-05 03:29:42,705 | INFO     | [payload] control thread has finished
[2025-06-05 06:48:18] 2025-06-05 03:29:43,009 | INFO     | [job] queue monitor thread has finished
[2025-06-05 06:48:18] 2025-06-05 03:29:44,775 | INFO     | [data] queue_monitor thread has finished
[2025-06-05 06:48:18] 2025-06-05 03:29:45,924 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140394964301632)>', '<ExcThread(monitor, started 140394218120960)>']
[2025-06-05 06:48:18] 2025-06-05 03:29:46,309 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-06-05 06:48:18] 2025-06-05 03:29:46,309 | INFO     | [monitor] control thread has ended
[2025-06-05 06:48:18] 2025-06-05 03:29:50,951 | INFO     | all workflow threads have been joined
[2025-06-05 06:48:18] 2025-06-05 03:29:50,951 | INFO     | end of generic workflow (traces error code: 0)
[2025-06-05 06:48:18] 2025-06-05 03:29:50,952 | INFO     | traces error code: 0
[2025-06-05 06:48:18] 2025-06-05 03:29:50,952 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-06-05 06:48:18] 2025-06-05 03:29:51,393 [wrapper] ==== pilot stdout END ====
[2025-06-05 06:48:18] 2025-06-05 03:29:51,492 [wrapper] ==== wrapper stdout RESUME ====
[2025-06-05 06:48:18] 2025-06-05 03:29:51,580 [wrapper] pilotpid: 4922
[2025-06-05 06:48:18] 2025-06-05 03:29:51,655 [wrapper] Pilot exit status: 0
[2025-06-05 06:48:18] 2025-06-05 03:29:52,145 [wrapper] pandaids: 6678363818
[2025-06-05 06:48:18] 2025-06-05 03:29:52,909 [wrapper] cleanup supervisor_pilot  2695 4923
[2025-06-05 06:48:18] 2025-06-05 03:29:53,008 [wrapper] Test setup, not cleaning
[2025-06-05 06:48:18] 2025-06-05 03:29:53,070 [wrapper] apfmon messages muted
[2025-06-05 06:48:18] 2025-06-05 03:29:53,570 [wrapper] ==== wrapper stdout END ====
[2025-06-05 06:48:18] 2025-06-05 03:29:53,649 [wrapper] ==== wrapper stderr END ====
[2025-06-05 06:48:18]  *** Error codes and diagnostics ***
[2025-06-05 06:48:18]     "exeErrorCode": 0,
[2025-06-05 06:48:18]     "exeErrorDiag": "",
[2025-06-05 06:48:18]     "pilotErrorCode": 0,
[2025-06-05 06:48:18]     "pilotErrorDiag": "",
[2025-06-05 06:48:18]  *** Listing of results directory ***
[2025-06-05 06:48:18] total 395252
[2025-06-05 06:48:18] -rw-r--r--. 1 boinc boinc    495897 Jun  4 06:58 pilot3.tar.gz
[2025-06-05 06:48:18] -rwx------. 1 boinc boinc     37140 Jun  4 07:55 runpilot2-wrapper.sh
[2025-06-05 06:48:18] -rw-r--r--. 1 boinc boinc      5111 Jun  4 07:55 queuedata.json
[2025-06-05 06:48:18] -rw-r--r--. 1 boinc boinc       100 Jun  5 01:37 wrapper_26015_x86_64-pc-linux-gnu
[2025-06-05 06:48:18] -rwxr-xr-x. 1 boinc boinc      7986 Jun  5 01:37 run_atlas
[2025-06-05 06:48:18] -rw-r--r--. 1 boinc boinc       105 Jun  5 01:37 job.xml
[2025-06-05 06:48:18] -rw-r--r--. 2 boinc boinc 214829038 Jun  5 01:37 EVNT.45006593._002149.pool.root.1
[2025-06-05 06:48:18] -rw-r--r--. 1 boinc boinc      6390 Jun  5 01:37 init_data.xml
[2025-06-05 06:48:18] -rw-r--r--. 2 boinc boinc     15093 Jun  5 01:37 start_atlas.sh
[2025-06-05 06:48:18] drwxrwx--x. 2 boinc boinc        68 Jun  5 01:37 shared
[2025-06-05 06:48:18] -rw-r--r--. 2 boinc boinc    508878 Jun  5 01:37 input.tar.gz
[2025-06-05 06:48:18] -rw-r--r--. 1 boinc boinc         0 Jun  5 01:37 boinc_lockfile
[2025-06-05 06:48:18] -rw-r--r--. 1 boinc boinc      2525 Jun  5 01:37 pandaJob.out
[2025-06-05 06:48:18] -rw-------. 1 boinc boinc    987117 Jun  5 01:38 agis_schedconf.cvmfs.json
[2025-06-05 06:48:18] drwx------. 4 boinc boinc      4096 Jun  5 01:38 pilot3
[2025-06-05 06:48:18] -rw-------. 1 boinc boinc 182938274 Jun  5 05:26 HITS.45006595._053693.pool.root.1
[2025-06-05 06:48:18] -rw-r--r--. 1 boinc boinc       531 Jun  5 05:27 boinc_task_state.xml
[2025-06-05 06:48:18] -rw-------. 1 boinc boinc      1017 Jun  5 05:27 memory_monitor_summary.json
[2025-06-05 06:48:18] -rw-------. 1 boinc boinc   1598969 Jun  5 05:27 agis_ddmendpoints.agis.ALL.json
[2025-06-05 06:48:18] -rw-------. 1 boinc boinc    380642 Jun  5 05:28 log.45006595._053693.job.log.tgz.1
[2025-06-05 06:48:18] -rw-------. 1 boinc boinc      7686 Jun  5 05:29 heartbeat.json
[2025-06-05 06:48:18] -rw-------. 1 boinc boinc        95 Jun  5 05:29 pilot_heartbeat.json
[2025-06-05 06:48:18] -rw-------. 1 boinc boinc      4539 Jun  5 05:29 pilotlog.txt
[2025-06-05 06:48:18] -rw-------. 1 boinc boinc   1196497 Jun  5 05:29 log.45006595._053693.job.log.1
[2025-06-05 06:48:18] -rw-------. 1 boinc boinc       357 Jun  5 05:29 output.list
[2025-06-05 06:48:18] -rw-r--r--. 1 boinc boinc       620 Jun  5 05:29 runtime_log
[2025-06-05 06:48:18] -rw-------. 1 boinc boinc   1597440 Jun  5 05:29 result.tar.gz
[2025-06-05 06:48:18] -rw-r--r--. 1 boinc boinc      8659 Jun  5 05:29 runtime_log.err
[2025-06-05 06:48:18] -rw-------. 1 boinc boinc       656 Jun  5 05:29 l4oKDmiGwg7n9Rq4apOajLDm4fhM0noT9bVof3QYDmUoaKDmfftKTo.diag
[2025-06-05 06:48:18] -rw-r--r--. 1 boinc boinc      8192 Jun  5 06:48 boinc_mmap_file
[2025-06-05 06:48:18] -rw-r--r--. 1 boinc boinc        28 Jun  5 06:48 wrapper_checkpoint.txt
[2025-06-05 06:48:18] -rw-r--r--. 1 boinc boinc     20832 Jun  5 06:48 stderr.txt
[2025-06-05 06:48:18] HITS file was successfully produced:
[2025-06-05 06:48:18] -rw-------. 1 boinc boinc 182938274 Jun  5 05:26 shared/HITS.pool.root.1
[2025-06-05 06:48:18]  *** Contents of shared directory: ***
[2025-06-05 06:48:18] total 390524
[2025-06-05 06:48:18] -rw-r--r--. 2 boinc boinc 214829038 Jun  5 01:37 ATLAS.root_0
[2025-06-05 06:48:18] -rw-r--r--. 2 boinc boinc     15093 Jun  5 01:37 start_atlas.sh
[2025-06-05 06:48:18] -rw-r--r--. 2 boinc boinc    508878 Jun  5 01:37 input.tar.gz
[2025-06-05 06:48:18] -rw-------. 1 boinc boinc 182938274 Jun  5 05:26 HITS.pool.root.1
[2025-06-05 06:48:18] -rw-------. 1 boinc boinc   1597440 Jun  5 05:29 result.tar.gz
06:48:20 (1247): run_atlas exited; CPU time 51485.530232
06:48:20 (1247): called boinc_finish(0)

</stderr_txt>
]]>

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