Stderr output

<core_client_version>8.1.0</core_client_version>
<![CDATA[
<stderr_txt>
11:41:08 (23075): wrapper (7.7.26015): starting
11:41:08 (23075): wrapper: running run_atlas (--nthreads 8)
[2025-06-04 11:41:08] Arguments: --nthreads 8
[2025-06-04 11:41:08] Threads: 8
[2025-06-04 11:41:08] Checking for CVMFS
[2025-06-04 11:41:08] Probing /cvmfs/atlas.cern.ch... OK
[2025-06-04 11:41:08] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-06-04 11:41:08] Running cvmfs_config stat atlas.cern.ch
[2025-06-04 11:41:08] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-06-04 11:41:08] 2.12.6.0 8898 6 35636 146786 1 8 15992127 25181185 27 16776704 0 2388 99.002 71472 87374 http://cvmfs-s1fnal.opensciencegrid.org:8000/cvmfs/atlas.cern.ch http://192.41.231.237:6081 1
[2025-06-04 11:41:08] CVMFS is ok
[2025-06-04 11:41:08] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-06-04 11:41:08] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2025-06-04 11:41:08] Further information can be found at the LHC@home message board.
[2025-06-04 11:41:08] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-06-04 11:41:08] Checking for apptainer binary...
[2025-06-04 11:41:08] Using apptainer found in PATH at /usr/bin/apptainer
[2025-06-04 11:41:08] Running /usr/bin/apptainer --version
[2025-06-04 11:41:08] apptainer version 1.4.1-1.el9
[2025-06-04 11:41:08] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-06-04 11:41:09] c-16-38.aglt2.org
[2025-06-04 11:41:09] apptainer works
[2025-06-04 11:41:09] Set ATHENA_PROC_NUMBER=8
[2025-06-04 11:41:09] Set ATHENA_CORE_NUMBER=8
[2025-06-04 11:41:09] Starting ATLAS job with PandaID=6667883383
[2025-06-04 11:41:09] Running command: /usr/bin/apptainer exec -B /cvmfs,/tmp/boinchome/slots/1 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-06-04 13:02:38]  *** The last 200 lines of the pilot log: ***
[2025-06-04 13:02:38]  is_altstaged=None
[2025-06-04 13:02:38]  is_tar=False
[2025-06-04 13:02:38]  lfn=log.44871837._076688.job.log.tgz.1
[2025-06-04 13:02:38]  mtime=0
[2025-06-04 13:02:38]  protocol_id=None
[2025-06-04 13:02:38]  protocols=[{'endpoint': 'davs://dav.ndgf.org:443', 'flavour': 'WEBDAV', 'id': 331, 'path': '/atlas/disk/atlasdatadisk/rucio/'}]
[2025-06-04 13:02:38]  replicas=None
[2025-06-04 13:02:38]  scope=mc23_13p6TeV
[2025-06-04 13:02:38]  status=None
[2025-06-04 13:02:38]  status_code=0
[2025-06-04 13:02:38]  storage_token=
[2025-06-04 13:02:38]  surl=/tmp/boinchome/slots/1/PanDA_Pilot-6667883383/log.44871837._076688.job.log.tgz.1
[2025-06-04 13:02:38]  turl=davs://dav.ndgf.org:443/atlas/disk/atlasdatadisk/rucio/mc23_13p6TeV/d6/7b/log.44871837._076688.job.log.tgz.1
[2025-06-04 13:02:38]  workdir=None
[2025-06-04 13:02:38] ]
[2025-06-04 13:02:38] 2025-06-04 17:02:21,295 | INFO     | transferring file log.44871837._076688.job.log.tgz.1 from /tmp/boinchome/slots/1/PanDA_Pilot-6667883383/log.44871837._076688.job.log.tgz.1 to /tmp/boinchome/slots/
[2025-06-04 13:02:38] 2025-06-04 17:02:21,295 | INFO     | executing command: /usr/bin/env mv /tmp/boinchome/slots/1/PanDA_Pilot-6667883383/log.44871837._076688.job.log.tgz.1 /tmp/boinchome/slots/1/log.44871837._076688.job
[2025-06-04 13:02:38] 2025-06-04 17:02:21,306 | INFO     | adding to output.list: log.44871837._076688.job.log.tgz.1 davs://dav.ndgf.org:443/atlas/disk/atlasdatadisk/rucio/mc23_13p6TeV/d6/7b/log.44871837._076688.job.log.tg
[2025-06-04 13:02:38] 2025-06-04 17:02:21,306 | INFO     | alt stage-out settings: ['pl', 'write_lan', 'w', 'default'], allow_altstageout=False, remain_files=0, has_altstorage=True
[2025-06-04 13:02:38] 2025-06-04 17:02:21,307 | INFO     | summary of transferred files:
[2025-06-04 13:02:38] 2025-06-04 17:02:21,307 | INFO     |  -- lfn=log.44871837._076688.job.log.tgz.1, status_code=0, status=transferred
[2025-06-04 13:02:38] 2025-06-04 17:02:21,307 | INFO     | stage-out finished correctly
[2025-06-04 13:02:38] 2025-06-04 17:02:21,686 | WARNING  | process 48211 can no longer be monitored (due to stat problems) - aborting
[2025-06-04 13:02:38] 2025-06-04 17:02:21,686 | INFO     | using path: /tmp/boinchome/slots/1/PanDA_Pilot-6667883383/memory_monitor_summary.json (trf name=prmon)
[2025-06-04 13:02:38] 2025-06-04 17:02:21,804 | INFO     | number of running child processes to parent process 48211: 1
[2025-06-04 13:02:38] 2025-06-04 17:02:21,804 | INFO     | maximum number of monitored processes: 6
[2025-06-04 13:02:38] 2025-06-04 17:02:22,321 | INFO     | finished stage-out for finished payload, adding job to finished_jobs queue
[2025-06-04 13:02:38] 2025-06-04 17:02:22,361 | INFO     | job 6667883383 has state=finished
[2025-06-04 13:02:38] 2025-06-04 17:02:22,361 | INFO     | preparing for final server update for job 6667883383 in state='finished'
[2025-06-04 13:02:38] 2025-06-04 17:02:22,362 | INFO     | this job has now completed (state=finished)
[2025-06-04 13:02:38] 2025-06-04 17:02:22,362 | INFO     | pilot will not update the server (heartbeat message will be written to file)
[2025-06-04 13:02:38] 2025-06-04 17:02:22,362 | INFO     | log transfer has been attempted: DONE
[2025-06-04 13:02:38] 2025-06-04 17:02:22,362 | INFO     | job 6667883383 has finished - writing final server update
[2025-06-04 13:02:38] 2025-06-04 17:02:22,362 | INFO     | total number of processed events: 400 (read)
[2025-06-04 13:02:38] 2025-06-04 17:02:22,375 | INFO     | executing command: lscpu
[2025-06-04 13:02:38] 2025-06-04 17:02:22,410 | INFO     | executing command: export ATLAS_LOCAL_ROOT_BASE=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase;source ${ATLAS_LOCAL_ROOT_BASE}/user/atlasLocalSetup.sh --quiet;lsetup
[2025-06-04 13:02:38] 2025-06-04 17:02:24,307 | INFO     | monitor loop #365: job 0:6667883383 is in state 'finished'
[2025-06-04 13:02:38] 2025-06-04 17:02:24,307 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-06-04 13:02:38] 2025-06-04 17:02:24,694 | INFO     | CPU arch script returned: x86-64-v3
[2025-06-04 13:02:38] 2025-06-04 17:02:24,694 | INFO     | using path: /tmp/boinchome/slots/1/PanDA_Pilot-6667883383/memory_monitor_summary.json (trf name=prmon)
[2025-06-04 13:02:38] 2025-06-04 17:02:24,695 | INFO     | extracted standard info from prmon json
[2025-06-04 13:02:38] 2025-06-04 17:02:24,695 | INFO     | extracted standard memory fields from prmon json
[2025-06-04 13:02:38] 2025-06-04 17:02:24,695 | WARNING  | GPU info not found in prmon json: 'gpu'
[2025-06-04 13:02:38] 2025-06-04 17:02:24,695 | WARNING  | format EVNTtoHITS has no such key: dbData
[2025-06-04 13:02:38] 2025-06-04 17:02:24,695 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2025-06-04 13:02:38] 2025-06-04 17:02:24,696 | INFO     | fitting pss+swap vs Time
[2025-06-04 13:02:38] 2025-06-04 17:02:24,697 | INFO     | sum of square deviations: 120605052.0
[2025-06-04 13:02:38] 2025-06-04 17:02:24,697 | INFO     | sum of deviations: -5589918183.0
[2025-06-04 13:02:38] 2025-06-04 17:02:24,697 | INFO     | mean x: 1749054201.0
[2025-06-04 13:02:38] 2025-06-04 17:02:24,697 | INFO     | mean y: 2191101.342465753
[2025-06-04 13:02:38] 2025-06-04 17:02:24,697 | INFO     | -- intersect: 81069026354.83116
[2025-06-04 13:02:38] 2025-06-04 17:02:24,697 | INFO     | intersect: 81069026354.83116
[2025-06-04 13:02:38] 2025-06-04 17:02:24,697 | INFO     | chi2: 0.09746094117875875
[2025-06-04 13:02:38] 2025-06-04 17:02:24,697 | INFO     | -- intersect: 81069026354.83116
[2025-06-04 13:02:38] 2025-06-04 17:02:24,697 | INFO     | current memory leak: -46.35 B/s (using 73 data points, chi2=0.10)
[2025-06-04 13:02:38] 2025-06-04 17:02:24,698 | INFO     | ..............................
[2025-06-04 13:02:38] 2025-06-04 17:02:24,698 | INFO     | . Timing measurements:
[2025-06-04 13:02:38] 2025-06-04 17:02:24,698 | INFO     | . get job = 0 s
[2025-06-04 13:02:38] 2025-06-04 17:02:24,698 | INFO     | . initial setup = 2 s
[2025-06-04 13:02:38] 2025-06-04 17:02:24,698 | INFO     | . payload setup = 7 s
[2025-06-04 13:02:38] 2025-06-04 17:02:24,698 | INFO     | . stage-in = 0 s
[2025-06-04 13:02:38] 2025-06-04 17:02:24,698 | INFO     | . payload execution = 4840 s
[2025-06-04 13:02:38] 2025-06-04 17:02:24,698 | INFO     | . stage-out = 0 s
[2025-06-04 13:02:38] 2025-06-04 17:02:24,698 | INFO     | . log creation = 0 s
[2025-06-04 13:02:38] 2025-06-04 17:02:24,698 | INFO     | ..............................
[2025-06-04 13:02:38] 2025-06-04 17:02:24,743 | INFO     | 
[2025-06-04 13:02:38] 2025-06-04 17:02:24,743 | INFO     | job summary report
[2025-06-04 13:02:38] 2025-06-04 17:02:24,743 | INFO     | --------------------------------------------------
[2025-06-04 13:02:38] 2025-06-04 17:02:24,743 | INFO     | PanDA job id: 6667883383
[2025-06-04 13:02:38] 2025-06-04 17:02:24,743 | INFO     | task id: 44871837
[2025-06-04 13:02:38] 2025-06-04 17:02:24,744 | INFO     | errors: (none)
[2025-06-04 13:02:38] 2025-06-04 17:02:24,744 | INFO     | status: LOG_TRANSFER = DONE 
[2025-06-04 13:02:38] 2025-06-04 17:02:24,744 | INFO     | pilot state: finished 
[2025-06-04 13:02:38] 2025-06-04 17:02:24,744 | INFO     | transexitcode: 0
[2025-06-04 13:02:38] 2025-06-04 17:02:24,744 | INFO     | exeerrorcode: 0
[2025-06-04 13:02:38] 2025-06-04 17:02:24,744 | INFO     | exeerrordiag: 
[2025-06-04 13:02:38] 2025-06-04 17:02:24,744 | INFO     | exitcode: 0
[2025-06-04 13:02:38] 2025-06-04 17:02:24,744 | INFO     | exitmsg: OK
[2025-06-04 13:02:38] 2025-06-04 17:02:24,744 | INFO     | cpuconsumptiontime: 36290 s
[2025-06-04 13:02:38] 2025-06-04 17:02:24,744 | INFO     | nevents: 400
[2025-06-04 13:02:38] 2025-06-04 17:02:24,744 | INFO     | neventsw: 0
[2025-06-04 13:02:38] 2025-06-04 17:02:24,744 | INFO     | pid: 48211
[2025-06-04 13:02:38] 2025-06-04 17:02:24,744 | INFO     | pgrp: 48211
[2025-06-04 13:02:38] 2025-06-04 17:02:24,744 | INFO     | corecount: 8
[2025-06-04 13:02:38] 2025-06-04 17:02:24,744 | INFO     | event service: False
[2025-06-04 13:02:38] 2025-06-04 17:02:24,744 | INFO     | sizes: {0: 2397392, 3: 2397598, 11: 2397626, 4851: 2432619, 4852: 2432619, 4855: 2432789}
[2025-06-04 13:02:38] 2025-06-04 17:02:24,744 | INFO     | --------------------------------------------------
[2025-06-04 13:02:38] 2025-06-04 17:02:24,744 | INFO     | 
[2025-06-04 13:02:38] 2025-06-04 17:02:24,744 | INFO     | executing command: ls -lF /tmp/boinchome/slots/1
[2025-06-04 13:02:38] 2025-06-04 17:02:24,755 | INFO     | queue jobs had 0 job(s) [purged]
[2025-06-04 13:02:38] 2025-06-04 17:02:24,756 | INFO     | queue payloads had 0 job(s) [purged]
[2025-06-04 13:02:38] 2025-06-04 17:02:24,756 | INFO     | queue data_in had 0 job(s) [purged]
[2025-06-04 13:02:38] 2025-06-04 17:02:24,756 | INFO     | queue data_out had 0 job(s) [purged]
[2025-06-04 13:02:38] 2025-06-04 17:02:24,756 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-06-04 13:02:38] 2025-06-04 17:02:24,756 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-06-04 13:02:38] 2025-06-04 17:02:24,756 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-06-04 13:02:38] 2025-06-04 17:02:24,756 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-06-04 13:02:38] 2025-06-04 17:02:24,756 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-06-04 13:02:38] 2025-06-04 17:02:24,756 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-06-04 13:02:38] 2025-06-04 17:02:24,756 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-06-04 13:02:38] 2025-06-04 17:02:24,756 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-06-04 13:02:38] 2025-06-04 17:02:24,756 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-06-04 13:02:38] 2025-06-04 17:02:24,756 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-06-04 13:02:38] 2025-06-04 17:02:24,756 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-06-04 13:02:38] 2025-06-04 17:02:24,756 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-06-04 13:02:38] 2025-06-04 17:02:24,756 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-06-04 13:02:38] 2025-06-04 17:02:24,757 | INFO     | queue completed_jobids has 1 job(s)
[2025-06-04 13:02:38] 2025-06-04 17:02:24,757 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-06-04 13:02:38] 2025-06-04 17:02:24,757 | INFO     | queue messages had 0 job(s) [purged]
[2025-06-04 13:02:38] 2025-06-04 17:02:24,757 | INFO     | job 6667883383 has completed (purged errors)
[2025-06-04 13:02:38] 2025-06-04 17:02:24,757 | INFO     | overall cleanup function is called
[2025-06-04 13:02:38] 2025-06-04 17:02:25,763 | INFO     | --- collectZombieJob: --- 10, [48211]
[2025-06-04 13:02:38] 2025-06-04 17:02:25,763 | INFO     | zombie collector waiting for pid 48211
[2025-06-04 13:02:38] 2025-06-04 17:02:25,764 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-06-04 13:02:38] 2025-06-04 17:02:25,764 | INFO     | collected zombie processes
[2025-06-04 13:02:38] 2025-06-04 17:02:25,764 | INFO     | will attempt to kill all subprocesses of pid=48211
[2025-06-04 13:02:38] 2025-06-04 17:02:25,891 | INFO     | process IDs to be killed: [48211] (in reverse order)
[2025-06-04 13:02:38] 2025-06-04 17:02:25,924 | WARNING  | found no corresponding commands to process id(s)
[2025-06-04 13:02:38] 2025-06-04 17:02:25,925 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-06-04 13:02:38] 2025-06-04 17:02:25,928 | INFO     | did not find any defunct processes belonging to 48211
[2025-06-04 13:02:38] 2025-06-04 17:02:25,931 | INFO     | did not find any defunct processes belonging to 48211
[2025-06-04 13:02:38] 2025-06-04 17:02:25,931 | INFO     | ready for new job
[2025-06-04 13:02:38] 2025-06-04 17:02:25,931 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-06-04 13:02:38] 2025-06-04 17:02:25,932 | INFO     | **************************************
[2025-06-04 13:02:38] 2025-06-04 17:02:25,932 | INFO     | ***  PanDA Pilot version 3.10.2.2  ***
[2025-06-04 13:02:38] 2025-06-04 17:02:25,932 | INFO     | **************************************
[2025-06-04 13:02:38] 2025-06-04 17:02:25,932 | INFO     | 
[2025-06-04 13:02:38] 2025-06-04 17:02:25,945 | INFO     | architecture information:
[2025-06-04 13:02:38] 2025-06-04 17:02:25,945 | INFO     | executing command: cat /etc/os-release
[2025-06-04 13:02:38] 2025-06-04 17:02:25,952 | INFO     | cat /etc/os-release:
[2025-06-04 13:02:38] NAME="CentOS Linux"
[2025-06-04 13:02:38] VERSION="7 (Core)"
[2025-06-04 13:02:38] ID="centos"
[2025-06-04 13:02:38] ID_LIKE="rhel fedora"
[2025-06-04 13:02:38] VERSION_ID="7"
[2025-06-04 13:02:38] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-06-04 13:02:38] ANSI_COLOR="0;31"
[2025-06-04 13:02:38] CPE_NAME="cpe:/o:centos:centos:7"
[2025-06-04 13:02:38] HOME_URL="https://www.centos.org/"
[2025-06-04 13:02:38] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-06-04 13:02:38] 
[2025-06-04 13:02:38] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-06-04 13:02:38] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-06-04 13:02:38] REDHAT_SUPPORT_PRODUCT="centos"
[2025-06-04 13:02:38] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-06-04 13:02:38] 
[2025-06-04 13:02:38] 2025-06-04 17:02:25,952 | INFO     | **************************************
[2025-06-04 13:02:38] 2025-06-04 17:02:26,455 | INFO     | executing command: df -mP /tmp/boinchome/slots/1
[2025-06-04 13:02:38] 2025-06-04 17:02:26,461 | INFO     | sufficient remaining disk space (63893929984 B)
[2025-06-04 13:02:38] 2025-06-04 17:02:26,461 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-06-04 13:02:38] 2025-06-04 17:02:26,462 | INFO     | current server update state: UPDATING_FINAL
[2025-06-04 13:02:38] 2025-06-04 17:02:26,462 | INFO     | update_server=False
[2025-06-04 13:02:38] 2025-06-04 17:02:26,462 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-06-04 13:02:38] 2025-06-04 17:02:26,462 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-06-04 13:02:38] 2025-06-04 17:02:26,810 | WARNING  | job monitor detected an abort_job request (signal=args.signal)
[2025-06-04 13:02:38] 2025-06-04 17:02:26,810 | WARNING  | cannot recover job monitoring - aborting pilot
[2025-06-04 13:02:38] 2025-06-04 17:02:26,810 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-06-04 13:02:38] 2025-06-04 17:02:26,810 | INFO     | will abort loop
[2025-06-04 13:02:38] 2025-06-04 17:02:26,857 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-06-04 13:02:38] 2025-06-04 17:02:27,035 | INFO     | all data control threads have been joined
[2025-06-04 13:02:38] 2025-06-04 17:02:27,040 | INFO     | job.realtimelogging is not enabled
[2025-06-04 13:02:38] 2025-06-04 17:02:27,214 | INFO     | found 0 job(s) in 20 queues
[2025-06-04 13:02:38] 2025-06-04 17:02:27,215 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-06-04 13:02:38] 2025-06-04 17:02:27,215 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-06-04 13:02:38] 2025-06-04 17:02:27,466 | INFO     | [job] retrieve thread has finished
[2025-06-04 13:02:38] 2025-06-04 17:02:27,467 | INFO     | [job] queue monitor thread has finished
[2025-06-04 13:02:38] 2025-06-04 17:02:27,656 | INFO     | all job control threads have been joined
[2025-06-04 13:02:38] 2025-06-04 17:02:27,771 | INFO     | all payload control threads have been joined
[2025-06-04 13:02:38] 2025-06-04 17:02:27,816 | INFO     | [job] job monitor thread has finished
[2025-06-04 13:02:38] 2025-06-04 17:02:27,827 | INFO     | [payload] failed_post thread has finished
[2025-06-04 13:02:38] 2025-06-04 17:02:27,872 | INFO     | [payload] execute_payloads thread has finished
[2025-06-04 13:02:38] 2025-06-04 17:02:28,040 | INFO     | [data] control thread has finished
[2025-06-04 13:02:38] 2025-06-04 17:02:28,046 | INFO     | [payload] run_realtimelog thread has finished
[2025-06-04 13:02:38] 2025-06-04 17:02:28,257 | INFO     | [data] copytool_in thread has finished
[2025-06-04 13:02:38] 2025-06-04 17:02:28,323 | INFO     | [payload] validate_post thread has finished
[2025-06-04 13:02:38] 2025-06-04 17:02:28,358 | INFO     | [job] validate thread has finished
[2025-06-04 13:02:38] 2025-06-04 17:02:28,367 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-06-04 13:02:38] 2025-06-04 17:02:28,465 | INFO     | [job] create_data_payload thread has finished
[2025-06-04 13:02:38] 2025-06-04 17:02:28,569 | INFO     | [payload] validate_pre thread has finished
[2025-06-04 13:02:38] 2025-06-04 17:02:28,662 | INFO     | [job] control thread has finished
[2025-06-04 13:02:38] 2025-06-04 17:02:28,776 | INFO     | [payload] control thread has finished
[2025-06-04 13:02:38] 2025-06-04 17:02:28,862 | INFO     | [data] copytool_out thread has finished
[2025-06-04 13:02:38] 2025-06-04 17:02:32,373 | INFO     | [data] queue_monitor thread has finished
[2025-06-04 13:02:38] 2025-06-04 17:02:33,509 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 139974945187648)>', '<ExcThread(monitor, started 139974183741184)>']
[2025-06-04 13:02:38] 2025-06-04 17:02:34,250 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-06-04 13:02:38] 2025-06-04 17:02:34,250 | INFO     | [monitor] control thread has ended
[2025-06-04 13:02:38] 2025-06-04 17:02:38,534 | INFO     | all workflow threads have been joined
[2025-06-04 13:02:38] 2025-06-04 17:02:38,534 | INFO     | end of generic workflow (traces error code: 0)
[2025-06-04 13:02:38] 2025-06-04 17:02:38,534 | INFO     | traces error code: 0
[2025-06-04 13:02:38] 2025-06-04 17:02:38,535 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-06-04 13:02:38] 2025-06-04 17:02:38,602 [wrapper] ==== pilot stdout END ====
[2025-06-04 13:02:38] 2025-06-04 17:02:38,604 [wrapper] ==== wrapper stdout RESUME ====
[2025-06-04 13:02:38] 2025-06-04 17:02:38,606 [wrapper] pilotpid: 29391
[2025-06-04 13:02:38] 2025-06-04 17:02:38,607 [wrapper] Pilot exit status: 0
[2025-06-04 13:02:38] 2025-06-04 17:02:38,612 [wrapper] pandaids: 6667883383
[2025-06-04 13:02:38] 2025-06-04 17:02:38,636 [wrapper] cleanup supervisor_pilot  190572 29392
[2025-06-04 13:02:38] 2025-06-04 17:02:38,638 [wrapper] Test setup, not cleaning
[2025-06-04 13:02:38] 2025-06-04 17:02:38,640 [wrapper] apfmon messages muted
[2025-06-04 13:02:38] 2025-06-04 17:02:38,641 [wrapper] ==== wrapper stdout END ====
[2025-06-04 13:02:38] 2025-06-04 17:02:38,643 [wrapper] ==== wrapper stderr END ====
[2025-06-04 13:02:38]  *** Error codes and diagnostics ***
[2025-06-04 13:02:38]     "exeErrorCode": 0,
[2025-06-04 13:02:38]     "exeErrorDiag": "",
[2025-06-04 13:02:38]     "pilotErrorCode": 0,
[2025-06-04 13:02:38]     "pilotErrorDiag": "",
[2025-06-04 13:02:38]  *** Listing of results directory ***
[2025-06-04 13:02:38] total 419236
[2025-06-04 13:02:38] -rw-r--r--. 1 boincer umatlas      5111 May 27 21:30 queuedata.json
[2025-06-04 13:02:38] -rw-r--r--. 1 boincer umatlas    495897 May 27 21:31 pilot3.tar.gz
[2025-06-04 13:02:38] -rwx------. 1 boincer umatlas     37140 May 27 21:35 runpilot2-wrapper.sh
[2025-06-04 13:02:38] -rw-r--r--. 1 boincer umatlas       100 Jun  4 11:41 wrapper_26015_x86_64-pc-linux-gnu
[2025-06-04 13:02:38] -rwxr-xr-x. 1 boincer umatlas      7986 Jun  4 11:41 run_atlas
[2025-06-04 13:02:38] -rw-r--r--. 1 boincer umatlas       105 Jun  4 11:41 job.xml
[2025-06-04 13:02:38] -rw-r--r--. 2 boincer umatlas 222992522 Jun  4 11:41 EVNT.44871834._003000.pool.root.1
[2025-06-04 13:02:38] -rw-r--r--. 2 boincer umatlas     15093 Jun  4 11:41 start_atlas.sh
[2025-06-04 13:02:38] drwxrwx--x. 2 boincer umatlas      4096 Jun  4 11:41 shared
[2025-06-04 13:02:38] -rw-r--r--. 2 boincer umatlas    508881 Jun  4 11:41 input.tar.gz
[2025-06-04 13:02:38] -rw-r--r--. 1 boincer umatlas         0 Jun  4 11:41 boinc_lockfile
[2025-06-04 13:02:38] -rw-r--r--. 1 boincer umatlas      2559 Jun  4 11:41 pandaJob.out
[2025-06-04 13:02:38] -rw-------. 1 boincer umatlas    990989 Jun  4 11:41 agis_schedconf.cvmfs.json
[2025-06-04 13:02:38] -rw-------. 1 boincer umatlas   1598969 Jun  4 11:41 agis_ddmendpoints.agis.ALL.json
[2025-06-04 13:02:38] drwx------. 4 boincer umatlas      4096 Jun  4 11:41 pilot3
[2025-06-04 13:02:38] -rw-r--r--. 1 boincer umatlas      6610 Jun  4 13:00 init_data.xml
[2025-06-04 13:02:38] -rw-------. 1 boincer umatlas        95 Jun  4 13:01 pilot_heartbeat.json
[2025-06-04 13:02:38] -rw-r--r--. 1 boincer umatlas       529 Jun  4 13:01 boinc_task_state.xml
[2025-06-04 13:02:38] -rw-------. 1 boincer umatlas 200912586 Jun  4 13:01 HITS.44871837._076688.pool.root.1
[2025-06-04 13:02:38] -rw-------. 1 boincer umatlas      1028 Jun  4 13:02 memory_monitor_summary.json
[2025-06-04 13:02:38] -rw-------. 1 boincer umatlas    300197 Jun  4 13:02 log.44871837._076688.job.log.tgz.1
[2025-06-04 13:02:38] -rw-------. 1 boincer umatlas      7707 Jun  4 13:02 heartbeat.json
[2025-06-04 13:02:38] -rw-r--r--. 1 boincer umatlas      8192 Jun  4 13:02 boinc_mmap_file
[2025-06-04 13:02:38] -rw-r--r--. 1 boincer umatlas        27 Jun  4 13:02 wrapper_checkpoint.txt
[2025-06-04 13:02:38] -rw-------. 1 boincer umatlas      4611 Jun  4 13:02 pilotlog.txt
[2025-06-04 13:02:38] -rw-------. 1 boincer umatlas    476861 Jun  4 13:02 log.44871837._076688.job.log.1
[2025-06-04 13:02:38] -rw-------. 1 boincer umatlas       357 Jun  4 13:02 output.list
[2025-06-04 13:02:38] -rw-r--r--. 1 boincer umatlas       620 Jun  4 13:02 runtime_log
[2025-06-04 13:02:38] -rw-------. 1 boincer umatlas    798720 Jun  4 13:02 result.tar.gz
[2025-06-04 13:02:38] -rw-------. 1 boincer umatlas       649 Jun  4 13:02 zbjLDmUsKe7nsSi4ap6QjLDmwznN0nGgGQJmUXzaDm1uaKDmKB7Ufm.diag
[2025-06-04 13:02:38] -rw-r--r--. 1 boincer umatlas      8654 Jun  4 13:02 runtime_log.err
[2025-06-04 13:02:38] -rw-r--r--. 1 boincer umatlas     21311 Jun  4 13:02 stderr.txt
[2025-06-04 13:02:38] HITS file was successfully produced:
[2025-06-04 13:02:38] -rw-------. 1 boincer umatlas 200912586 Jun  4 13:01 shared/HITS.pool.root.1
[2025-06-04 13:02:38]  *** Contents of shared directory: ***
[2025-06-04 13:02:38] total 415276
[2025-06-04 13:02:38] -rw-r--r--. 2 boincer umatlas 222992522 Jun  4 11:41 ATLAS.root_0
[2025-06-04 13:02:38] -rw-r--r--. 2 boincer umatlas     15093 Jun  4 11:41 start_atlas.sh
[2025-06-04 13:02:38] -rw-r--r--. 2 boincer umatlas    508881 Jun  4 11:41 input.tar.gz
[2025-06-04 13:02:38] -rw-------. 1 boincer umatlas 200912586 Jun  4 13:01 HITS.pool.root.1
[2025-06-04 13:02:38] -rw-------. 1 boincer umatlas    798720 Jun  4 13:02 result.tar.gz
13:02:40 (23075): run_atlas exited; CPU time 36424.394164
13:02:40 (23075): called boinc_finish(0)

</stderr_txt>
]]>

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