Stderr output

<core_client_version>7.20.2</core_client_version>
<![CDATA[
<stderr_txt>
01:35:25 (29773): wrapper (7.7.26015): starting
01:35:25 (29773): wrapper: running run_atlas (--nthreads 8)
[2025-06-05 01:35:25] Arguments: --nthreads 8
[2025-06-05 01:35:25] Threads: 8
[2025-06-05 01:35:25] Checking for CVMFS
[2025-06-05 01:35:26] Probing /cvmfs/atlas.cern.ch... OK
[2025-06-05 01:35:26] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-06-05 01:35:26] Running cvmfs_config stat atlas.cern.ch
[2025-06-05 01:35:28] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-06-05 01:35:28] 2.11.2.0 2013 33875 100560 146798 0 59 14407719 25165825 2747 130560 0 17470998 99.863 18486388 2020 http://s1cern-cvmfs.openhtc.io/cvmfs/atlas.cern.ch http://192.168.73.11:3128/ 1
[2025-06-05 01:35:28] CVMFS is ok
[2025-06-05 01:35:28] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-06-05 01:35:28] Checking for apptainer binary...
[2025-06-05 01:35:28] Using apptainer found in PATH at /usr/bin/apptainer
[2025-06-05 01:35:28] Running /usr/bin/apptainer --version
[2025-06-05 01:35:28] apptainer version 1.3.2-1.el7
[2025-06-05 01:35:28] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-06-05 02:05:52] cg-vwn303.simple-grid.lan
[2025-06-05 02:05:52] apptainer works
[2025-06-05 02:05:52] Set ATHENA_PROC_NUMBER=8
[2025-06-05 02:05:52] Set ATHENA_CORE_NUMBER=8
[2025-06-05 02:05:52] Starting ATLAS job with PandaID=6678756319
[2025-06-05 02:05:52] Running command: /usr/bin/apptainer exec -B /cvmfs,/var/lib/boinc/slots/6 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-06-05 06:11:47]  *** The last 200 lines of the pilot log: ***
[2025-06-05 06:11:47] 2025-06-05 03:51:45,873 | INFO     | extracted standard info from prmon json
[2025-06-05 06:11:47] 2025-06-05 03:51:45,873 | INFO     | extracted standard memory fields from prmon json
[2025-06-05 06:11:47] 2025-06-05 03:51:45,874 | WARNING  | GPU info not found in prmon json: 'gpu'
[2025-06-05 06:11:47] 2025-06-05 03:51:45,874 | WARNING  | format EVNTtoHITS has no such key: dbData
[2025-06-05 06:11:47] 2025-06-05 03:51:45,874 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2025-06-05 06:11:47] 2025-06-05 03:51:45,885 | INFO     | fitting pss+swap vs Time
[2025-06-05 06:11:47] 2025-06-05 03:51:45,885 | INFO     | sum of square deviations: 2871616632.5
[2025-06-05 06:11:47] 2025-06-05 03:51:45,887 | INFO     | sum of deviations: 26329415482.000015
[2025-06-05 06:11:47] 2025-06-05 03:51:45,887 | INFO     | mean x: 1749089028.5
[2025-06-05 06:11:47] 2025-06-05 03:51:45,887 | INFO     | mean y: 2464704.0857142857
[2025-06-05 06:11:47] 2025-06-05 03:51:45,888 | INFO     | -- intersect: -16034666166.789429
[2025-06-05 06:11:47] 2025-06-05 03:51:45,888 | INFO     | intersect: -16034666166.789429
[2025-06-05 06:11:47] 2025-06-05 03:51:45,888 | INFO     | chi2: 6.4613972445217644
[2025-06-05 06:11:47] 2025-06-05 03:51:45,888 | INFO     | sum of square deviations: 2671343110.0
[2025-06-05 06:11:47] 2025-06-05 03:51:45,890 | INFO     | sum of deviations: 39647382672.999985
[2025-06-05 06:11:47] 2025-06-05 03:51:45,890 | INFO     | mean x: 1749088876.0
[2025-06-05 06:11:47] 2025-06-05 03:51:45,890 | INFO     | mean y: 2474643.8536585364
[2025-06-05 06:11:47] 2025-06-05 03:51:45,890 | INFO     | -- intersect: -25957049513.213318
[2025-06-05 06:11:47] 2025-06-05 03:51:45,891 | INFO     | intersect: -25957049513.213318
[2025-06-05 06:11:47] 2025-06-05 03:51:45,891 | INFO     | chi2: 5.756018484611649
[2025-06-05 06:11:47] 2025-06-05 03:51:45,891 | INFO     | current chi2=5.756018484611649 (change=10.916814633369967 %)
[2025-06-05 06:11:47] 2025-06-05 03:51:45,891 | INFO     | right removable region: 204
[2025-06-05 06:11:47] 2025-06-05 03:51:45,892 | INFO     | sum of square deviations: 2671343110.0
[2025-06-05 06:11:47] 2025-06-05 03:51:45,893 | INFO     | sum of deviations: -44737838651.00001
[2025-06-05 06:11:47] 2025-06-05 03:51:45,894 | INFO     | mean x: 1749089181.0
[2025-06-05 06:11:47] 2025-06-05 03:51:45,894 | INFO     | mean y: 2518750.092682927
[2025-06-05 06:11:47] 2025-06-05 03:51:45,894 | INFO     | -- intersect: 29295075469.168633
[2025-06-05 06:11:47] 2025-06-05 03:51:45,894 | INFO     | intersect: 29295075469.168633
[2025-06-05 06:11:47] 2025-06-05 03:51:45,894 | INFO     | chi2: 1.8727372979741053
[2025-06-05 06:11:47] 2025-06-05 03:51:45,894 | INFO     | current chi2=1.8727372979741053 (change=71.01652743047353 %)
[2025-06-05 06:11:47] 2025-06-05 03:51:45,895 | INFO     | sum of square deviations: 2480604650.0
[2025-06-05 06:11:47] 2025-06-05 03:51:45,896 | INFO     | sum of deviations: -70480688198.0
[2025-06-05 06:11:47] 2025-06-05 03:51:45,897 | INFO     | mean x: 1749089333.5
[2025-06-05 06:11:47] 2025-06-05 03:51:45,897 | INFO     | mean y: 2539150.25
[2025-06-05 06:11:47] 2025-06-05 03:51:45,897 | INFO     | -- intersect: 49698898441.06288
[2025-06-05 06:11:47] 2025-06-05 03:51:45,897 | INFO     | intersect: 49698898441.06288
[2025-06-05 06:11:47] 2025-06-05 03:51:45,897 | INFO     | chi2: 0.9891411549265768
[2025-06-05 06:11:47] 2025-06-05 03:51:45,898 | INFO     | current chi2=0.9891411549265768 (change=47.18206573892598 %)
[2025-06-05 06:11:47] 2025-06-05 03:51:45,898 | INFO     | sum of square deviations: 2299168690.0
[2025-06-05 06:11:47] 2025-06-05 03:51:45,908 | INFO     | sum of deviations: -66290599235.0
[2025-06-05 06:11:47] 2025-06-05 03:51:45,908 | INFO     | mean x: 1749089486.0
[2025-06-05 06:11:47] 2025-06-05 03:51:45,908 | INFO     | mean y: 2535612.312820513
[2025-06-05 06:11:47] 2025-06-05 03:51:45,908 | INFO     | -- intersect: 50433019746.37527
[2025-06-05 06:11:47] 2025-06-05 03:51:45,909 | INFO     | intersect: 50433019746.37527
[2025-06-05 06:11:47] 2025-06-05 03:51:45,909 | INFO     | chi2: 0.9875351757652493
[2025-06-05 06:11:47] 2025-06-05 03:51:45,909 | INFO     | current chi2=0.9875351757652493 (change=0.1623609687382538 %)
[2025-06-05 06:11:47] 2025-06-05 03:51:45,909 | INFO     | left removable region: 30
[2025-06-05 06:11:47] 2025-06-05 03:51:45,910 | INFO     | sum of square deviations: 1633472487.5
[2025-06-05 06:11:47] 2025-06-05 03:51:45,911 | INFO     | sum of deviations: -34408013129.0
[2025-06-05 06:11:47] 2025-06-05 03:51:45,911 | INFO     | mean x: 1749089760.5
[2025-06-05 06:11:47] 2025-06-05 03:51:45,911 | INFO     | mean y: 2531448.9310344825
[2025-06-05 06:11:47] 2025-06-05 03:51:45,911 | INFO     | -- intersect: 36845945650.043175
[2025-06-05 06:11:47] 2025-06-05 03:51:45,911 | INFO     | intersect: 36845945650.043175
[2025-06-05 06:11:47] 2025-06-05 03:51:45,912 | INFO     | chi2: 0.17876684560805556
[2025-06-05 06:11:47] 2025-06-05 03:51:45,912 | INFO     | -- intersect: 36845945650.043175
[2025-06-05 06:11:47] 2025-06-05 03:51:45,912 | INFO     | current memory leak: -21.06 B/s (using 174 data points, chi2=0.18)
[2025-06-05 06:11:47] 2025-06-05 03:51:45,913 | INFO     | ..............................
[2025-06-05 06:11:47] 2025-06-05 03:51:45,913 | INFO     | . Timing measurements:
[2025-06-05 06:11:47] 2025-06-05 03:51:45,913 | INFO     | . get job = 0 s
[2025-06-05 06:11:47] 2025-06-05 03:51:45,913 | INFO     | . initial setup = 3 s
[2025-06-05 06:11:47] 2025-06-05 03:51:45,913 | INFO     | . payload setup = 174 s
[2025-06-05 06:11:47] 2025-06-05 03:51:45,914 | INFO     | . stage-in = 0 s
[2025-06-05 06:11:47] 2025-06-05 03:51:45,914 | INFO     | . payload execution = 12908 s
[2025-06-05 06:11:47] 2025-06-05 03:51:45,914 | INFO     | . stage-out = 3 s
[2025-06-05 06:11:47] 2025-06-05 03:51:45,914 | INFO     | . log creation = 1 s
[2025-06-05 06:11:47] 2025-06-05 03:51:45,914 | INFO     | ..............................
[2025-06-05 06:11:47] 2025-06-05 03:51:46,442 | INFO     | 
[2025-06-05 06:11:47] 2025-06-05 03:51:46,442 | INFO     | job summary report
[2025-06-05 06:11:47] 2025-06-05 03:51:46,442 | INFO     | --------------------------------------------------
[2025-06-05 06:11:47] 2025-06-05 03:51:46,442 | INFO     | PanDA job id: 6678756319
[2025-06-05 06:11:47] 2025-06-05 03:51:46,443 | INFO     | task id: 45006595
[2025-06-05 06:11:47] 2025-06-05 03:51:46,443 | INFO     | errors: (none)
[2025-06-05 06:11:47] 2025-06-05 03:51:46,443 | INFO     | status: LOG_TRANSFER = DONE 
[2025-06-05 06:11:47] 2025-06-05 03:51:46,443 | INFO     | pilot state: finished 
[2025-06-05 06:11:47] 2025-06-05 03:51:46,443 | INFO     | transexitcode: 0
[2025-06-05 06:11:47] 2025-06-05 03:51:46,443 | INFO     | exeerrorcode: 0
[2025-06-05 06:11:47] 2025-06-05 03:51:46,443 | INFO     | exeerrordiag: 
[2025-06-05 06:11:47] 2025-06-05 03:51:46,443 | INFO     | exitcode: 0
[2025-06-05 06:11:47] 2025-06-05 03:51:46,443 | INFO     | exitmsg: OK
[2025-06-05 06:11:47] 2025-06-05 03:51:46,443 | INFO     | cpuconsumptiontime: 48157 s
[2025-06-05 06:11:47] 2025-06-05 03:51:46,443 | INFO     | nevents: 400
[2025-06-05 06:11:47] 2025-06-05 03:51:46,443 | INFO     | neventsw: 0
[2025-06-05 06:11:47] 2025-06-05 03:51:46,443 | INFO     | pid: 27739
[2025-06-05 06:11:47] 2025-06-05 03:51:46,444 | INFO     | pgrp: 27739
[2025-06-05 06:11:47] 2025-06-05 03:51:46,444 | INFO     | corecount: 8
[2025-06-05 06:11:47] 2025-06-05 03:51:46,444 | INFO     | event service: False
[2025-06-05 06:11:47] 2025-06-05 03:51:46,444 | INFO     | sizes: {0: 2397290, 1: 2397290, 12: 2397318, 22: 2397346, 33: 2397374, 44: 2397430, 54: 2397586, 65: 2397614, 76: 2397642, 86: 2397904, 87: 2397932, 13087: 2427422
[2025-06-05 06:11:47] 2025-06-05 03:51:46,444 | INFO     | --------------------------------------------------
[2025-06-05 06:11:47] 2025-06-05 03:51:46,444 | INFO     | 
[2025-06-05 06:11:47] 2025-06-05 03:51:46,444 | INFO     | executing command: ls -lF /var/lib/boinc/slots/6
[2025-06-05 06:11:47] 2025-06-05 03:51:46,958 | INFO     | queue jobs had 0 job(s) [purged]
[2025-06-05 06:11:47] 2025-06-05 03:51:46,958 | INFO     | queue payloads had 0 job(s) [purged]
[2025-06-05 06:11:47] 2025-06-05 03:51:46,958 | INFO     | queue data_in had 0 job(s) [purged]
[2025-06-05 06:11:47] 2025-06-05 03:51:46,958 | INFO     | queue data_out had 0 job(s) [purged]
[2025-06-05 06:11:48] 2025-06-05 03:51:46,958 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-06-05 06:11:48] 2025-06-05 03:51:46,958 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-06-05 06:11:48] 2025-06-05 03:51:46,959 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-06-05 06:11:48] 2025-06-05 03:51:46,959 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-06-05 06:11:48] 2025-06-05 03:51:46,959 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-06-05 06:11:48] 2025-06-05 03:51:46,959 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-06-05 06:11:48] 2025-06-05 03:51:46,959 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-06-05 06:11:48] 2025-06-05 03:51:46,959 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-06-05 06:11:48] 2025-06-05 03:51:46,959 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-06-05 06:11:48] 2025-06-05 03:51:46,959 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-06-05 06:11:48] 2025-06-05 03:51:46,959 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-06-05 06:11:48] 2025-06-05 03:51:46,960 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-06-05 06:11:48] 2025-06-05 03:51:46,960 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-06-05 06:11:48] 2025-06-05 03:51:46,960 | INFO     | queue completed_jobids has 1 job(s)
[2025-06-05 06:11:48] 2025-06-05 03:51:46,960 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-06-05 06:11:48] 2025-06-05 03:51:46,960 | INFO     | queue messages had 0 job(s) [purged]
[2025-06-05 06:11:48] 2025-06-05 03:51:46,960 | INFO     | job 6678756319 has completed (purged errors)
[2025-06-05 06:11:48] 2025-06-05 03:51:46,960 | INFO     | overall cleanup function is called
[2025-06-05 06:11:48] 2025-06-05 03:51:47,970 | INFO     | --- collectZombieJob: --- 10, [27739]
[2025-06-05 06:11:48] 2025-06-05 03:51:47,970 | INFO     | zombie collector waiting for pid 27739
[2025-06-05 06:11:48] 2025-06-05 03:51:47,970 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-06-05 06:11:48] 2025-06-05 03:51:47,970 | INFO     | collected zombie processes
[2025-06-05 06:11:48] 2025-06-05 03:51:47,971 | INFO     | will attempt to kill all subprocesses of pid=27739
[2025-06-05 06:11:48] 2025-06-05 03:51:48,096 | INFO     | process IDs to be killed: [27739] (in reverse order)
[2025-06-05 06:11:48] 2025-06-05 03:51:49,033 | WARNING  | found no corresponding commands to process id(s)
[2025-06-05 06:11:48] 2025-06-05 03:51:49,034 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-06-05 06:11:48] 2025-06-05 03:51:49,037 | INFO     | did not find any defunct processes belonging to 27739
[2025-06-05 06:11:48] 2025-06-05 03:51:49,041 | INFO     | did not find any defunct processes belonging to 27739
[2025-06-05 06:11:48] 2025-06-05 03:51:49,041 | INFO     | ready for new job
[2025-06-05 06:11:48] 2025-06-05 03:51:49,041 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-06-05 06:11:48] 2025-06-05 03:51:49,043 | INFO     | **************************************
[2025-06-05 06:11:48] 2025-06-05 03:51:49,044 | INFO     | ***  PanDA Pilot version 3.10.2.2  ***
[2025-06-05 06:11:48] 2025-06-05 03:51:49,044 | INFO     | **************************************
[2025-06-05 06:11:48] 2025-06-05 03:51:49,044 | INFO     | 
[2025-06-05 06:11:48] 2025-06-05 03:51:49,044 | INFO     | pilot is running in a VM
[2025-06-05 06:11:48] 2025-06-05 03:51:49,045 | INFO     | architecture information:
[2025-06-05 06:11:48] 2025-06-05 03:51:49,046 | INFO     | executing command: cat /etc/os-release
[2025-06-05 06:11:48] 2025-06-05 03:51:49,216 | INFO     | cat /etc/os-release:
[2025-06-05 06:11:48] NAME="CentOS Linux"
[2025-06-05 06:11:48] VERSION="7 (Core)"
[2025-06-05 06:11:48] ID="centos"
[2025-06-05 06:11:48] ID_LIKE="rhel fedora"
[2025-06-05 06:11:48] VERSION_ID="7"
[2025-06-05 06:11:48] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-06-05 06:11:48] ANSI_COLOR="0;31"
[2025-06-05 06:11:48] CPE_NAME="cpe:/o:centos:centos:7"
[2025-06-05 06:11:48] HOME_URL="https://www.centos.org/"
[2025-06-05 06:11:48] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-06-05 06:11:48] 
[2025-06-05 06:11:48] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-06-05 06:11:48] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-06-05 06:11:48] REDHAT_SUPPORT_PRODUCT="centos"
[2025-06-05 06:11:48] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-06-05 06:11:48] 
[2025-06-05 06:11:48] 2025-06-05 03:51:49,217 | INFO     | **************************************
[2025-06-05 06:11:48] 2025-06-05 03:51:49,720 | INFO     | executing command: df -mP /var/lib/boinc/slots/6
[2025-06-05 06:11:48] 2025-06-05 03:51:50,004 | INFO     | sufficient remaining disk space (497426628608 B)
[2025-06-05 06:11:48] 2025-06-05 03:51:50,005 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-06-05 06:11:48] 2025-06-05 03:51:50,005 | INFO     | current server update state: UPDATING_FINAL
[2025-06-05 06:11:48] 2025-06-05 03:51:50,005 | INFO     | update_server=False
[2025-06-05 06:11:48] 2025-06-05 03:51:50,005 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-06-05 06:11:48] 2025-06-05 03:51:50,006 | WARNING  | aborting monitor loop since graceful_stop has been set (timing out remaining threads)
[2025-06-05 06:11:48] 2025-06-05 03:51:50,006 | INFO     | found 0 job(s) in 20 queues
[2025-06-05 06:11:48] 2025-06-05 03:51:50,006 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-06-05 06:11:48] 2025-06-05 03:51:50,006 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-06-05 06:11:48] 2025-06-05 03:51:50,013 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-06-05 06:11:48] 2025-06-05 03:51:50,069 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-06-05 06:11:48] 2025-06-05 03:51:50,069 | INFO     | aborting loop
[2025-06-05 06:11:48] 2025-06-05 03:51:50,254 | INFO     | all job control threads have been joined
[2025-06-05 06:11:48] 2025-06-05 03:51:50,753 | INFO     | all payload control threads have been joined
[2025-06-05 06:11:48] 2025-06-05 03:51:50,915 | INFO     | all data control threads have been joined
[2025-06-05 06:11:48] 2025-06-05 03:51:51,012 | INFO     | [job] retrieve thread has finished
[2025-06-05 06:11:48] 2025-06-05 03:51:51,024 | INFO     | [payload] execute_payloads thread has finished
[2025-06-05 06:11:48] 2025-06-05 03:51:51,074 | INFO     | [job] job monitor thread has finished
[2025-06-05 06:11:48] 2025-06-05 03:51:51,081 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-06-05 06:11:48] 2025-06-05 03:51:51,141 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-06-05 06:11:48] 2025-06-05 03:51:51,260 | INFO     | [job] control thread has finished
[2025-06-05 06:11:48] 2025-06-05 03:51:51,274 | INFO     | [payload] validate_post thread has finished
[2025-06-05 06:11:48] 2025-06-05 03:51:51,435 | INFO     | [payload] failed_post thread has finished
[2025-06-05 06:11:48] 2025-06-05 03:51:51,507 | INFO     | [data] copytool_in thread has finished
[2025-06-05 06:11:48] 2025-06-05 03:51:51,759 | INFO     | [payload] control thread has finished
[2025-06-05 06:11:48] 2025-06-05 03:51:51,922 | INFO     | [data] control thread has finished
[2025-06-05 06:11:48] 2025-06-05 03:51:52,014 | INFO     | [payload] run_realtimelog thread has finished
[2025-06-05 06:11:48] 2025-06-05 03:51:52,020 | INFO     | [data] copytool_out thread has finished
[2025-06-05 06:11:48] 2025-06-05 03:51:52,029 | INFO     | [job] create_data_payload thread has finished
[2025-06-05 06:11:48] 2025-06-05 03:51:52,087 | INFO     | [job] queue monitor thread has finished
[2025-06-05 06:11:48] 2025-06-05 03:51:52,281 | INFO     | [job] validate thread has finished
[2025-06-05 06:11:48] 2025-06-05 03:51:52,391 | INFO     | [payload] validate_pre thread has finished
[2025-06-05 06:11:48] 2025-06-05 03:51:55,150 | INFO     | [data] queue_monitor thread has finished
[2025-06-05 06:11:48] 2025-06-05 03:51:55,881 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140121823188800)>', '<ExcThread(monitor, started 140121160546048)>']
[2025-06-05 06:11:48] 2025-06-05 03:51:56,041 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-06-05 06:11:48] 2025-06-05 03:51:56,041 | INFO     | [monitor] control thread has ended
[2025-06-05 06:11:48] 2025-06-05 03:52:00,907 | INFO     | all workflow threads have been joined
[2025-06-05 06:11:48] 2025-06-05 03:52:00,907 | INFO     | end of generic workflow (traces error code: 0)
[2025-06-05 06:11:48] 2025-06-05 03:52:00,907 | INFO     | traces error code: 0
[2025-06-05 06:11:48] 2025-06-05 03:52:00,908 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-06-05 06:11:48] 2025-06-05 03:52:01,495 [wrapper] ==== pilot stdout END ====
[2025-06-05 06:11:48] 2025-06-05 03:52:01,522 [wrapper] ==== wrapper stdout RESUME ====
[2025-06-05 06:11:48] 2025-06-05 03:52:01,620 [wrapper] pilotpid: 18456
[2025-06-05 06:11:48] 2025-06-05 03:52:01,687 [wrapper] Pilot exit status: 0
[2025-06-05 06:11:48] 2025-06-05 03:52:02,252 [wrapper] pandaids: 6678756319
[2025-06-05 06:11:48] 2025-06-05 03:52:03,277 [wrapper] cleanup supervisor_pilot 25694 18457
[2025-06-05 06:11:48] 2025-06-05 03:52:03,322 [wrapper] Test setup, not cleaning
[2025-06-05 06:11:48] 2025-06-05 03:52:03,464 [wrapper] apfmon messages muted
[2025-06-05 06:11:48] 2025-06-05 03:52:03,588 [wrapper] ==== wrapper stdout END ====
[2025-06-05 06:11:48] 2025-06-05 03:52:03,645 [wrapper] ==== wrapper stderr END ====
[2025-06-05 06:11:48]  *** Error codes and diagnostics ***
[2025-06-05 06:11:48]     "exeErrorCode": 0,
[2025-06-05 06:11:48]     "exeErrorDiag": "",
[2025-06-05 06:11:48]     "pilotErrorCode": 0,
[2025-06-05 06:11:48]     "pilotErrorDiag": "",
[2025-06-05 06:11:48]  *** Listing of results directory ***
[2025-06-05 06:11:48] total 389380
[2025-06-05 06:11:48] -rw-r--r--. 1 boinc boinc    495897 Jun  4 09:34 pilot3.tar.gz
[2025-06-05 06:11:48] -rw-r--r--. 1 boinc boinc      5111 Jun  4 09:51 queuedata.json
[2025-06-05 06:11:48] -rwx------. 1 boinc boinc     37140 Jun  4 09:53 runpilot2-wrapper.sh
[2025-06-05 06:11:48] -rw-r--r--. 1 boinc boinc       100 Jun  5 01:35 wrapper_26015_x86_64-pc-linux-gnu
[2025-06-05 06:11:48] -rwxr-xr-x. 1 boinc boinc      7986 Jun  5 01:35 run_atlas
[2025-06-05 06:11:48] -rw-r--r--. 1 boinc boinc       105 Jun  5 01:35 job.xml
[2025-06-05 06:11:48] -rw-r--r--. 1 boinc boinc      6391 Jun  5 01:35 init_data.xml
[2025-06-05 06:11:48] -rw-r--r--. 2 boinc boinc 217898559 Jun  5 01:35 EVNT.45006593._000697.pool.root.1
[2025-06-05 06:11:48] -rw-r--r--. 2 boinc boinc     15093 Jun  5 01:35 start_atlas.sh
[2025-06-05 06:11:48] drwxrwx--x. 2 boinc boinc        68 Jun  5 01:35 shared
[2025-06-05 06:11:48] -rw-r--r--. 2 boinc boinc    508889 Jun  5 01:35 input.tar.gz
[2025-06-05 06:11:48] -rw-r--r--. 1 boinc boinc         0 Jun  5 01:35 boinc_lockfile
[2025-06-05 06:11:48] -rw-r--r--. 1 boinc boinc      2524 Jun  5 02:05 pandaJob.out
[2025-06-05 06:11:48] -rw-------. 1 boinc boinc    987117 Jun  5 02:09 agis_schedconf.cvmfs.json
[2025-06-05 06:11:48] drwx------. 4 boinc boinc      4096 Jun  5 02:09 pilot3
[2025-06-05 06:11:48] -rw-------. 1 boinc boinc 173960685 Jun  5 05:48 HITS.45006595._055540.pool.root.1
[2025-06-05 06:11:48] -rw-r--r--. 1 boinc boinc       531 Jun  5 05:49 boinc_task_state.xml
[2025-06-05 06:11:48] -rw-------. 1 boinc boinc      1014 Jun  5 05:50 memory_monitor_summary.json
[2025-06-05 06:11:48] -rw-------. 1 boinc boinc   1598969 Jun  5 05:50 agis_ddmendpoints.agis.ALL.json
[2025-06-05 06:11:48] -rw-------. 1 boinc boinc    379060 Jun  5 05:50 log.45006595._055540.job.log.tgz.1
[2025-06-05 06:11:48] -rw-------. 1 boinc boinc        95 Jun  5 05:51 pilot_heartbeat.json
[2025-06-05 06:11:48] -rw-------. 1 boinc boinc      7693 Jun  5 05:51 heartbeat.json
[2025-06-05 06:11:48] -rw-------. 1 boinc boinc      4539 Jun  5 05:52 pilotlog.txt
[2025-06-05 06:11:48] -rw-------. 1 boinc boinc   1145524 Jun  5 05:52 log.45006595._055540.job.log.1
[2025-06-05 06:11:48] -rw-------. 1 boinc boinc       357 Jun  5 05:52 output.list
[2025-06-05 06:11:48] -rw-r--r--. 1 boinc boinc       620 Jun  5 05:52 runtime_log
[2025-06-05 06:11:48] -rw-------. 1 boinc boinc   1546240 Jun  5 05:52 result.tar.gz
[2025-06-05 06:11:48] -rw-r--r--. 1 boinc boinc      8659 Jun  5 05:52 runtime_log.err
[2025-06-05 06:11:48] -rw-------. 1 boinc boinc       657 Jun  5 05:52 HeIODm76xg7nsSi4ap6QjLDmwznN0nGgGQJmUXzaDmPlnKDm5HP36n.diag
[2025-06-05 06:11:48] -rw-r--r--. 1 boinc boinc      8192 Jun  5 06:11 boinc_mmap_file
[2025-06-05 06:11:48] -rw-r--r--. 1 boinc boinc        28 Jun  5 06:11 wrapper_checkpoint.txt
[2025-06-05 06:11:48] -rw-r--r--. 1 boinc boinc     20508 Jun  5 06:11 stderr.txt
[2025-06-05 06:11:48] HITS file was successfully produced:
[2025-06-05 06:11:48] -rw-------. 1 boinc boinc 173960685 Jun  5 05:48 shared/HITS.pool.root.1
[2025-06-05 06:11:48]  *** Contents of shared directory: ***
[2025-06-05 06:11:48] total 384704
[2025-06-05 06:11:48] -rw-r--r--. 2 boinc boinc 217898559 Jun  5 01:35 ATLAS.root_0
[2025-06-05 06:11:48] -rw-r--r--. 2 boinc boinc     15093 Jun  5 01:35 start_atlas.sh
[2025-06-05 06:11:48] -rw-r--r--. 2 boinc boinc    508889 Jun  5 01:35 input.tar.gz
[2025-06-05 06:11:48] -rw-------. 1 boinc boinc 173960685 Jun  5 05:48 HITS.pool.root.1
[2025-06-05 06:11:48] -rw-------. 1 boinc boinc   1546240 Jun  5 05:52 result.tar.gz
06:11:49 (29773): run_atlas exited; CPU time 48339.133145
06:11:49 (29773): called boinc_finish(0)

</stderr_txt>
]]>

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