Stderr output

<core_client_version>7.20.2</core_client_version>
<![CDATA[
<stderr_txt>
02:05:54 (13200): wrapper (7.7.26015): starting
02:05:54 (13200): wrapper: running run_atlas (--nthreads 8)
[2025-06-05 02:05:54] Arguments: --nthreads 8
[2025-06-05 02:05:54] Threads: 8
[2025-06-05 02:05:54] Checking for CVMFS
[2025-06-05 02:05:55] Probing /cvmfs/atlas.cern.ch... OK
[2025-06-05 02:05:55] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-06-05 02:05:55] Running cvmfs_config stat atlas.cern.ch
[2025-06-05 02:05:56] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-06-05 02:05:56] 2.11.2.0 11048 33955 97684 146798 2 60 22266780 25165824 3523 130560 0 17313937 99.763 19610064 5027 http://s1cern-cvmfs.openhtc.io/cvmfs/atlas.cern.ch http://192.168.73.11:3128/ 1
[2025-06-05 02:05:56] CVMFS is ok
[2025-06-05 02:05:56] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-06-05 02:05:56] Checking for apptainer binary...
[2025-06-05 02:05:56] Using apptainer found in PATH at /usr/bin/apptainer
[2025-06-05 02:05:56] Running /usr/bin/apptainer --version
[2025-06-05 02:05:56] apptainer version 1.3.2-1.el7
[2025-06-05 02:05:56] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-06-05 02:36:32] cg-vwn330.simple-grid.lan
[2025-06-05 02:36:32] apptainer works
[2025-06-05 02:36:32] Set ATHENA_PROC_NUMBER=8
[2025-06-05 02:36:32] Set ATHENA_CORE_NUMBER=8
[2025-06-05 02:36:32] Starting ATLAS job with PandaID=6666805709
[2025-06-05 02:36:32] Running command: /usr/bin/apptainer exec -B /cvmfs,/var/lib/boinc/slots/7 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-06-05 14:36:54]  *** The last 200 lines of the pilot log: ***
[2025-06-05 14:36:54] 2025-06-05 06:04:51,407 | INFO     | extracted standard memory fields from prmon json
[2025-06-05 14:36:54] 2025-06-05 06:04:51,407 | WARNING  | GPU info not found in prmon json: 'gpu'
[2025-06-05 14:36:54] 2025-06-05 06:04:51,407 | WARNING  | format EVNTtoHITS has no such key: dbData
[2025-06-05 14:36:54] 2025-06-05 06:04:51,408 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2025-06-05 14:36:54] 2025-06-05 06:04:51,414 | INFO     | fitting pss+swap vs Time
[2025-06-05 14:36:54] 2025-06-05 06:04:51,415 | INFO     | sum of square deviations: 9508390372.0
[2025-06-05 14:36:54] 2025-06-05 06:04:51,418 | INFO     | sum of deviations: -663757226.0000076
[2025-06-05 14:36:54] 2025-06-05 06:04:51,419 | INFO     | mean x: 1749093832.0
[2025-06-05 14:36:54] 2025-06-05 06:04:51,419 | INFO     | mean y: 2495809.7635782748
[2025-06-05 14:36:54] 2025-06-05 06:04:51,419 | INFO     | -- intersect: 124595726.20798942
[2025-06-05 14:36:54] 2025-06-05 06:04:51,419 | INFO     | intersect: 124595726.20798942
[2025-06-05 14:36:54] 2025-06-05 06:04:51,419 | INFO     | chi2: 2.506664939739563
[2025-06-05 14:36:54] 2025-06-05 06:04:51,420 | INFO     | sum of square deviations: 9059954057.0
[2025-06-05 14:36:54] 2025-06-05 06:04:51,423 | INFO     | sum of deviations: 20984084271.500008
[2025-06-05 14:36:54] 2025-06-05 06:04:51,423 | INFO     | mean x: 1749093679.5
[2025-06-05 14:36:54] 2025-06-05 06:04:51,423 | INFO     | mean y: 2503075.8928571427
[2025-06-05 14:36:54] 2025-06-05 06:04:51,423 | INFO     | -- intersect: -4048635477.179391
[2025-06-05 14:36:54] 2025-06-05 06:04:51,423 | INFO     | intersect: -4048635477.179391
[2025-06-05 14:36:54] 2025-06-05 06:04:51,424 | INFO     | chi2: 1.662915696921941
[2025-06-05 14:36:54] 2025-06-05 06:04:51,424 | INFO     | current chi2=1.662915696921941 (change=33.66023234462623 %)
[2025-06-05 14:36:54] 2025-06-05 06:04:51,425 | INFO     | sum of square deviations: 8625843592.0
[2025-06-05 14:36:54] 2025-06-05 06:04:51,428 | INFO     | sum of deviations: 20552186672.999985
[2025-06-05 14:36:54] 2025-06-05 06:04:51,428 | INFO     | mean x: 1749093527.0
[2025-06-05 14:36:54] 2025-06-05 06:04:51,428 | INFO     | mean y: 2502924.1584158414
[2025-06-05 14:36:54] 2025-06-05 06:04:51,428 | INFO     | -- intersect: -4164938357.6171393
[2025-06-05 14:36:54] 2025-06-05 06:04:51,428 | INFO     | intersect: -4164938357.6171393
[2025-06-05 14:36:54] 2025-06-05 06:04:51,429 | INFO     | chi2: 1.6633179254781352
[2025-06-05 14:36:54] 2025-06-05 06:04:51,429 | INFO     | current chi2=1.6633179254781352 (change=-0.024188150784716977 %)
[2025-06-05 14:36:54] 2025-06-05 06:04:51,429 | INFO     | right removable region: 302
[2025-06-05 14:36:54] 2025-06-05 06:04:51,430 | INFO     | sum of square deviations: 9059954057.0
[2025-06-05 14:36:54] 2025-06-05 06:04:51,433 | INFO     | sum of deviations: -50466180779.00001
[2025-06-05 14:36:54] 2025-06-05 06:04:51,433 | INFO     | mean x: 1749093984.5
[2025-06-05 14:36:54] 2025-06-05 06:04:51,435 | INFO     | mean y: 2512633.2792207794
[2025-06-05 14:36:54] 2025-06-05 06:04:51,435 | INFO     | -- intersect: 9745397935.554924
[2025-06-05 14:36:54] 2025-06-05 06:04:51,435 | INFO     | intersect: 9745397935.554924
[2025-06-05 14:36:54] 2025-06-05 06:04:51,436 | INFO     | chi2: 1.0320909980279829
[2025-06-05 14:36:54] 2025-06-05 06:04:51,436 | INFO     | current chi2=1.0320909980279829 (change=58.826128627497575 %)
[2025-06-05 14:36:54] 2025-06-05 06:04:51,437 | INFO     | sum of square deviations: 8625843592.0
[2025-06-05 14:36:54] 2025-06-05 06:04:51,439 | INFO     | sum of deviations: -52771537614.0
[2025-06-05 14:36:54] 2025-06-05 06:04:51,440 | INFO     | mean x: 1749094137.0
[2025-06-05 14:36:54] 2025-06-05 06:04:51,440 | INFO     | mean y: 2513433.9372937293
[2025-06-05 14:36:54] 2025-06-05 06:04:51,443 | INFO     | -- intersect: 10703192858.118809
[2025-06-05 14:36:54] 2025-06-05 06:04:51,444 | INFO     | intersect: 10703192858.118809
[2025-06-05 14:36:54] 2025-06-05 06:04:51,444 | INFO     | chi2: 1.0203063104961887
[2025-06-05 14:36:54] 2025-06-05 06:04:51,444 | INFO     | current chi2=1.0203063104961887 (change=1.1418264042910162 %)
[2025-06-05 14:36:54] 2025-06-05 06:04:51,444 | INFO     | left removable region: 20
[2025-06-05 14:36:54] 2025-06-05 06:04:51,445 | INFO     | sum of square deviations: 6953769450.5
[2025-06-05 14:36:54] 2025-06-05 06:04:51,447 | INFO     | sum of deviations: -12081852515.999998
[2025-06-05 14:36:54] 2025-06-05 06:04:51,448 | INFO     | mean x: 1749094106.5
[2025-06-05 14:36:54] 2025-06-05 06:04:51,448 | INFO     | mean y: 2514078.14893617
[2025-06-05 14:36:54] 2025-06-05 06:04:51,448 | INFO     | -- intersect: 3041484119.0406876
[2025-06-05 14:36:54] 2025-06-05 06:04:51,448 | INFO     | intersect: 3041484119.0406876
[2025-06-05 14:36:54] 2025-06-05 06:04:51,449 | INFO     | chi2: 0.10720693446816623
[2025-06-05 14:36:54] 2025-06-05 06:04:51,449 | INFO     | -- intersect: 3041484119.0406876
[2025-06-05 14:36:54] 2025-06-05 06:04:51,449 | INFO     | current memory leak: -1.74 B/s (using 282 data points, chi2=0.11)
[2025-06-05 14:36:54] 2025-06-05 06:04:51,450 | INFO     | ..............................
[2025-06-05 14:36:54] 2025-06-05 06:04:51,450 | INFO     | . Timing measurements:
[2025-06-05 14:36:54] 2025-06-05 06:04:51,450 | INFO     | . get job = 0 s
[2025-06-05 14:36:54] 2025-06-05 06:04:51,450 | INFO     | . initial setup = 3 s
[2025-06-05 14:36:54] 2025-06-05 06:04:51,450 | INFO     | . payload setup = 126 s
[2025-06-05 14:36:54] 2025-06-05 06:04:51,450 | INFO     | . stage-in = 0 s
[2025-06-05 14:36:54] 2025-06-05 06:04:51,450 | INFO     | . payload execution = 19107 s
[2025-06-05 14:36:54] 2025-06-05 06:04:51,451 | INFO     | . stage-out = 3 s
[2025-06-05 14:36:54] 2025-06-05 06:04:51,451 | INFO     | . log creation = 1 s
[2025-06-05 14:36:54] 2025-06-05 06:04:51,451 | INFO     | ..............................
[2025-06-05 14:36:54] 2025-06-05 06:04:51,571 | INFO     | 
[2025-06-05 14:36:54] 2025-06-05 06:04:51,572 | INFO     | job summary report
[2025-06-05 14:36:54] 2025-06-05 06:04:51,572 | INFO     | --------------------------------------------------
[2025-06-05 14:36:54] 2025-06-05 06:04:51,572 | INFO     | PanDA job id: 6666805709
[2025-06-05 14:36:54] 2025-06-05 06:04:51,572 | INFO     | task id: 44871837
[2025-06-05 14:36:54] 2025-06-05 06:04:51,572 | INFO     | errors: (none)
[2025-06-05 14:36:54] 2025-06-05 06:04:51,572 | INFO     | status: LOG_TRANSFER = DONE 
[2025-06-05 14:36:54] 2025-06-05 06:04:51,572 | INFO     | pilot state: finished 
[2025-06-05 14:36:54] 2025-06-05 06:04:51,572 | INFO     | transexitcode: 0
[2025-06-05 14:36:54] 2025-06-05 06:04:51,572 | INFO     | exeerrorcode: 0
[2025-06-05 14:36:54] 2025-06-05 06:04:51,573 | INFO     | exeerrordiag: 
[2025-06-05 14:36:54] 2025-06-05 06:04:51,573 | INFO     | exitcode: 0
[2025-06-05 14:36:54] 2025-06-05 06:04:51,573 | INFO     | exitmsg: OK
[2025-06-05 14:36:54] 2025-06-05 06:04:51,573 | INFO     | cpuconsumptiontime: 73304 s
[2025-06-05 14:36:54] 2025-06-05 06:04:51,573 | INFO     | nevents: 400
[2025-06-05 14:36:54] 2025-06-05 06:04:51,573 | INFO     | neventsw: 0
[2025-06-05 14:36:54] 2025-06-05 06:04:51,573 | INFO     | pid: 11817
[2025-06-05 14:36:54] 2025-06-05 06:04:51,573 | INFO     | pgrp: 11817
[2025-06-05 14:36:54] 2025-06-05 06:04:51,573 | INFO     | corecount: 8
[2025-06-05 14:36:54] 2025-06-05 06:04:51,573 | INFO     | event service: False
[2025-06-05 14:36:54] 2025-06-05 06:04:51,574 | INFO     | sizes: {0: 2396564, 1: 2397420, 2: 2397448, 13: 2397448, 24: 2397504, 34: 2397532, 45: 2397688, 56: 2397716, 66: 2397744, 77: 2397772, 85: 2398034, 88: 2398342, 19
[2025-06-05 14:36:54] 2025-06-05 06:04:51,574 | INFO     | --------------------------------------------------
[2025-06-05 14:36:54] 2025-06-05 06:04:51,574 | INFO     | 
[2025-06-05 14:36:54] 2025-06-05 06:04:51,574 | INFO     | executing command: ls -lF /var/lib/boinc/slots/7
[2025-06-05 14:36:54] 2025-06-05 06:04:51,606 | INFO     | queue jobs had 0 job(s) [purged]
[2025-06-05 14:36:54] 2025-06-05 06:04:51,607 | INFO     | queue payloads had 0 job(s) [purged]
[2025-06-05 14:36:54] 2025-06-05 06:04:51,607 | INFO     | queue data_in had 0 job(s) [purged]
[2025-06-05 14:36:54] 2025-06-05 06:04:51,607 | INFO     | queue data_out had 0 job(s) [purged]
[2025-06-05 14:36:54] 2025-06-05 06:04:51,607 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-06-05 14:36:54] 2025-06-05 06:04:51,607 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-06-05 14:36:54] 2025-06-05 06:04:51,607 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-06-05 14:36:54] 2025-06-05 06:04:51,607 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-06-05 14:36:54] 2025-06-05 06:04:51,607 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-06-05 14:36:54] 2025-06-05 06:04:51,608 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-06-05 14:36:54] 2025-06-05 06:04:51,608 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-06-05 14:36:54] 2025-06-05 06:04:51,608 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-06-05 14:36:54] 2025-06-05 06:04:51,608 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-06-05 14:36:54] 2025-06-05 06:04:51,608 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-06-05 14:36:54] 2025-06-05 06:04:51,608 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-06-05 14:36:54] 2025-06-05 06:04:51,608 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-06-05 14:36:54] 2025-06-05 06:04:51,608 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-06-05 14:36:54] 2025-06-05 06:04:51,608 | INFO     | queue completed_jobids has 1 job(s)
[2025-06-05 14:36:54] 2025-06-05 06:04:51,608 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-06-05 14:36:54] 2025-06-05 06:04:51,608 | INFO     | queue messages had 0 job(s) [purged]
[2025-06-05 14:36:54] 2025-06-05 06:04:51,609 | INFO     | job 6666805709 has completed (purged errors)
[2025-06-05 14:36:54] 2025-06-05 06:04:51,609 | INFO     | overall cleanup function is called
[2025-06-05 14:36:54] 2025-06-05 06:04:52,620 | INFO     | --- collectZombieJob: --- 10, [11817]
[2025-06-05 14:36:54] 2025-06-05 06:04:52,620 | INFO     | zombie collector waiting for pid 11817
[2025-06-05 14:36:54] 2025-06-05 06:04:52,621 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-06-05 14:36:54] 2025-06-05 06:04:52,621 | INFO     | collected zombie processes
[2025-06-05 14:36:54] 2025-06-05 06:04:52,621 | INFO     | will attempt to kill all subprocesses of pid=11817
[2025-06-05 14:36:54] 2025-06-05 06:04:52,756 | INFO     | process IDs to be killed: [11817] (in reverse order)
[2025-06-05 14:36:54] 2025-06-05 06:04:53,780 | WARNING  | found no corresponding commands to process id(s)
[2025-06-05 14:36:54] 2025-06-05 06:04:53,780 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-06-05 14:36:54] 2025-06-05 06:04:53,784 | INFO     | did not find any defunct processes belonging to 11817
[2025-06-05 14:36:54] 2025-06-05 06:04:53,791 | INFO     | did not find any defunct processes belonging to 11817
[2025-06-05 14:36:54] 2025-06-05 06:04:53,791 | INFO     | ready for new job
[2025-06-05 14:36:54] 2025-06-05 06:04:53,791 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-06-05 14:36:54] 2025-06-05 06:04:53,794 | INFO     | **************************************
[2025-06-05 14:36:54] 2025-06-05 06:04:53,794 | INFO     | ***  PanDA Pilot version 3.10.2.2  ***
[2025-06-05 14:36:54] 2025-06-05 06:04:53,794 | INFO     | **************************************
[2025-06-05 14:36:54] 2025-06-05 06:04:53,794 | INFO     | 
[2025-06-05 14:36:54] 2025-06-05 06:04:53,795 | INFO     | pilot is running in a VM
[2025-06-05 14:36:54] 2025-06-05 06:04:53,795 | INFO     | architecture information:
[2025-06-05 14:36:54] 2025-06-05 06:04:53,796 | INFO     | executing command: cat /etc/os-release
[2025-06-05 14:36:54] 2025-06-05 06:04:54,037 | INFO     | cat /etc/os-release:
[2025-06-05 14:36:54] NAME="CentOS Linux"
[2025-06-05 14:36:54] VERSION="7 (Core)"
[2025-06-05 14:36:54] ID="centos"
[2025-06-05 14:36:54] ID_LIKE="rhel fedora"
[2025-06-05 14:36:54] VERSION_ID="7"
[2025-06-05 14:36:54] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-06-05 14:36:54] ANSI_COLOR="0;31"
[2025-06-05 14:36:54] CPE_NAME="cpe:/o:centos:centos:7"
[2025-06-05 14:36:54] HOME_URL="https://www.centos.org/"
[2025-06-05 14:36:54] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-06-05 14:36:54] 
[2025-06-05 14:36:54] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-06-05 14:36:54] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-06-05 14:36:54] REDHAT_SUPPORT_PRODUCT="centos"
[2025-06-05 14:36:54] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-06-05 14:36:54] 
[2025-06-05 14:36:54] 2025-06-05 06:04:54,037 | INFO     | **************************************
[2025-06-05 14:36:54] 2025-06-05 06:04:54,539 | INFO     | executing command: df -mP /var/lib/boinc/slots/7
[2025-06-05 14:36:54] 2025-06-05 06:04:54,793 | INFO     | sufficient remaining disk space (497208524800 B)
[2025-06-05 14:36:54] 2025-06-05 06:04:54,794 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-06-05 14:36:54] 2025-06-05 06:04:54,794 | INFO     | current server update state: UPDATING_FINAL
[2025-06-05 14:36:54] 2025-06-05 06:04:54,794 | INFO     | update_server=False
[2025-06-05 14:36:54] 2025-06-05 06:04:54,794 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-06-05 14:36:54] 2025-06-05 06:04:54,798 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-06-05 14:36:54] 2025-06-05 06:04:54,824 | WARNING  | job monitor detected an abort_job request (signal=args.signal)
[2025-06-05 14:36:54] 2025-06-05 06:04:54,825 | WARNING  | cannot recover job monitoring - aborting pilot
[2025-06-05 14:36:54] 2025-06-05 06:04:54,825 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-06-05 14:36:54] 2025-06-05 06:04:54,825 | INFO     | will abort loop
[2025-06-05 14:36:54] 2025-06-05 06:04:54,921 | INFO     | found 0 job(s) in 20 queues
[2025-06-05 14:36:54] 2025-06-05 06:04:54,922 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-06-05 14:36:54] 2025-06-05 06:04:54,922 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-06-05 14:36:54] 2025-06-05 06:04:55,032 | INFO     | all data control threads have been joined
[2025-06-05 14:36:54] 2025-06-05 06:04:55,320 | INFO     | all job control threads have been joined
[2025-06-05 14:36:54] 2025-06-05 06:04:55,367 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-06-05 14:36:54] 2025-06-05 06:04:55,676 | INFO     | all payload control threads have been joined
[2025-06-05 14:36:54] 2025-06-05 06:04:55,800 | INFO     | [job] retrieve thread has finished
[2025-06-05 14:36:54] 2025-06-05 06:04:55,830 | INFO     | [job] job monitor thread has finished
[2025-06-05 14:36:54] 2025-06-05 06:04:56,038 | INFO     | [data] control thread has finished
[2025-06-05 14:36:54] 2025-06-05 06:04:56,204 | INFO     | [job] validate thread has finished
[2025-06-05 14:36:54] 2025-06-05 06:04:56,326 | INFO     | [job] control thread has finished
[2025-06-05 14:36:54] 2025-06-05 06:04:56,600 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-06-05 14:36:54] 2025-06-05 06:04:56,682 | INFO     | [payload] control thread has finished
[2025-06-05 14:36:54] 2025-06-05 06:04:56,885 | INFO     | [payload] validate_post thread has finished
[2025-06-05 14:36:54] 2025-06-05 06:04:56,896 | INFO     | [payload] validate_pre thread has finished
[2025-06-05 14:36:54] 2025-06-05 06:04:56,918 | INFO     | [payload] run_realtimelog thread has finished
[2025-06-05 14:36:54] 2025-06-05 06:04:56,959 | INFO     | [payload] execute_payloads thread has finished
[2025-06-05 14:36:54] 2025-06-05 06:04:57,135 | INFO     | [job] create_data_payload thread has finished
[2025-06-05 14:36:54] 2025-06-05 06:04:57,238 | INFO     | [data] copytool_in thread has finished
[2025-06-05 14:36:54] 2025-06-05 06:04:57,374 | INFO     | [data] copytool_out thread has finished
[2025-06-05 14:36:54] 2025-06-05 06:04:57,384 | INFO     | [payload] failed_post thread has finished
[2025-06-05 14:36:54] 2025-06-05 06:04:57,606 | INFO     | [job] queue monitor thread has finished
[2025-06-05 14:36:54] 2025-06-05 06:04:58,807 | INFO     | [data] queue_monitor thread has finished
[2025-06-05 14:36:54] 2025-06-05 06:04:59,882 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140686836430656)>', '<ExcThread(monitor, started 140686393329408)>']
[2025-06-05 14:36:54] 2025-06-05 06:04:59,952 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-06-05 14:36:54] 2025-06-05 06:04:59,952 | INFO     | [monitor] control thread has ended
[2025-06-05 14:36:54] 2025-06-05 06:05:04,908 | INFO     | all workflow threads have been joined
[2025-06-05 14:36:54] 2025-06-05 06:05:04,909 | INFO     | end of generic workflow (traces error code: 0)
[2025-06-05 14:36:54] 2025-06-05 06:05:04,909 | INFO     | traces error code: 0
[2025-06-05 14:36:54] 2025-06-05 06:05:04,909 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-06-05 14:36:54] 2025-06-05 06:05:05,441 [wrapper] ==== pilot stdout END ====
[2025-06-05 14:36:54] 2025-06-05 06:05:05,553 [wrapper] ==== wrapper stdout RESUME ====
[2025-06-05 14:36:54] 2025-06-05 06:05:05,621 [wrapper] pilotpid: 3177
[2025-06-05 14:36:54] 2025-06-05 06:05:05,762 [wrapper] Pilot exit status: 0
[2025-06-05 14:36:54] 2025-06-05 06:05:06,230 [wrapper] pandaids: 6666805709
[2025-06-05 14:36:54] 2025-06-05 06:05:07,165 [wrapper] cleanup supervisor_pilot 28293 3178
[2025-06-05 14:36:54] 2025-06-05 06:05:07,259 [wrapper] Test setup, not cleaning
[2025-06-05 14:36:54] 2025-06-05 06:05:07,366 [wrapper] apfmon messages muted
[2025-06-05 14:36:54] 2025-06-05 06:05:07,500 [wrapper] ==== wrapper stdout END ====
[2025-06-05 14:36:54] 2025-06-05 06:05:07,580 [wrapper] ==== wrapper stderr END ====
[2025-06-05 14:36:54]  *** Error codes and diagnostics ***
[2025-06-05 14:36:54]     "exeErrorCode": 0,
[2025-06-05 14:36:54]     "exeErrorDiag": "",
[2025-06-05 14:36:54]     "pilotErrorCode": 0,
[2025-06-05 14:36:54]     "pilotErrorDiag": "",
[2025-06-05 14:36:54]  *** Listing of results directory ***
[2025-06-05 14:36:54] total 420688
[2025-06-05 14:36:54] -rw-r--r--. 1 boinc boinc    495897 May 27 08:07 pilot3.tar.gz
[2025-06-05 14:36:54] -rwx------. 1 boinc boinc     37140 May 27 08:12 runpilot2-wrapper.sh
[2025-06-05 14:36:54] -rw-r--r--. 1 boinc boinc      5111 May 27 08:12 queuedata.json
[2025-06-05 14:36:54] -rw-r--r--. 1 boinc boinc       100 Jun  5 02:05 wrapper_26015_x86_64-pc-linux-gnu
[2025-06-05 14:36:54] -rwxr-xr-x. 1 boinc boinc      7986 Jun  5 02:05 run_atlas
[2025-06-05 14:36:54] -rw-r--r--. 1 boinc boinc       105 Jun  5 02:05 job.xml
[2025-06-05 14:36:54] -rw-r--r--. 2 boinc boinc 223263433 Jun  5 02:05 EVNT.44871834._002491.pool.root.1
[2025-06-05 14:36:54] -rw-r--r--. 2 boinc boinc     15093 Jun  5 02:05 start_atlas.sh
[2025-06-05 14:36:54] drwxrwx--x. 2 boinc boinc        68 Jun  5 02:05 shared
[2025-06-05 14:36:54] -rw-r--r--. 2 boinc boinc    508882 Jun  5 02:05 input.tar.gz
[2025-06-05 14:36:54] -rw-r--r--. 1 boinc boinc      6390 Jun  5 02:05 init_data.xml
[2025-06-05 14:36:54] -rw-r--r--. 1 boinc boinc         0 Jun  5 02:05 boinc_lockfile
[2025-06-05 14:36:54] -rw-r--r--. 1 boinc boinc      2559 Jun  5 02:36 pandaJob.out
[2025-06-05 14:36:54] -rw-------. 1 boinc boinc    987117 Jun  5 02:39 agis_schedconf.cvmfs.json
[2025-06-05 14:36:54] drwx------. 4 boinc boinc      4096 Jun  5 02:39 pilot3
[2025-06-05 14:36:54] -rw-------. 1 boinc boinc 199494102 Jun  5 08:02 HITS.44871837._063183.pool.root.1
[2025-06-05 14:36:54] -rw-r--r--. 1 boinc boinc       531 Jun  5 08:02 boinc_task_state.xml
[2025-06-05 14:36:54] -rw-------. 1 boinc boinc      1014 Jun  5 08:03 memory_monitor_summary.json
[2025-06-05 14:36:54] -rw-------. 1 boinc boinc   1598969 Jun  5 08:03 agis_ddmendpoints.agis.ALL.json
[2025-06-05 14:36:54] -rw-------. 1 boinc boinc    445180 Jun  5 08:03 log.44871837._063183.job.log.tgz.1
[2025-06-05 14:36:54] -rw-------. 1 boinc boinc        95 Jun  5 08:04 pilot_heartbeat.json
[2025-06-05 14:36:54] -rw-------. 1 boinc boinc      7688 Jun  5 08:04 heartbeat.json
[2025-06-05 14:36:54] -rw-------. 1 boinc boinc      4602 Jun  5 08:05 pilotlog.txt
[2025-06-05 14:36:54] -rw-------. 1 boinc boinc   1659352 Jun  5 08:05 log.44871837._063183.job.log.1
[2025-06-05 14:36:54] -rw-------. 1 boinc boinc       357 Jun  5 08:05 output.list
[2025-06-05 14:36:54] -rw-r--r--. 1 boinc boinc       620 Jun  5 08:05 runtime_log
[2025-06-05 14:36:54] -rw-------. 1 boinc boinc   2119680 Jun  5 08:05 result.tar.gz
[2025-06-05 14:36:54] -rw-r--r--. 1 boinc boinc      8659 Jun  5 08:05 runtime_log.err
[2025-06-05 14:36:54] -rw-------. 1 boinc boinc       657 Jun  5 08:05 pXpNDmsi2d7n9Rq4apOajLDm4fhM0noT9bVof3QYDmfQRKDm16clYn.diag
[2025-06-05 14:36:54] -rw-r--r--. 1 boinc boinc      8192 Jun  5 14:36 boinc_mmap_file
[2025-06-05 14:36:54] -rw-r--r--. 1 boinc boinc        28 Jun  5 14:36 wrapper_checkpoint.txt
[2025-06-05 14:36:54] -rw-r--r--. 1 boinc boinc     20511 Jun  5 14:36 stderr.txt
[2025-06-05 14:36:54] HITS file was successfully produced:
[2025-06-05 14:36:54] -rw-------. 1 boinc boinc 199494102 Jun  5 08:02 shared/HITS.pool.root.1
[2025-06-05 14:36:54]  *** Contents of shared directory: ***
[2025-06-05 14:36:54] total 415440
[2025-06-05 14:36:54] -rw-r--r--. 2 boinc boinc 223263433 Jun  5 02:05 ATLAS.root_0
[2025-06-05 14:36:54] -rw-r--r--. 2 boinc boinc     15093 Jun  5 02:05 start_atlas.sh
[2025-06-05 14:36:54] -rw-r--r--. 2 boinc boinc    508882 Jun  5 02:05 input.tar.gz
[2025-06-05 14:36:54] -rw-------. 1 boinc boinc 199494102 Jun  5 08:02 HITS.pool.root.1
[2025-06-05 14:36:54] -rw-------. 1 boinc boinc   2119680 Jun  5 08:05 result.tar.gz
14:36:56 (13200): run_atlas exited; CPU time 73570.105386
14:36:56 (13200): called boinc_finish(0)

</stderr_txt>
]]>

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