Stderr output

<core_client_version>7.20.2</core_client_version>
<![CDATA[
<stderr_txt>
02:01:01 (32211): wrapper (7.7.26015): starting
02:01:01 (32211): wrapper: running run_atlas (--nthreads 8)
[2025-06-05 02:01:01] Arguments: --nthreads 8
[2025-06-05 02:01:01] Threads: 8
[2025-06-05 02:01:01] Checking for CVMFS
[2025-06-05 02:01:02] Probing /cvmfs/atlas.cern.ch... OK
[2025-06-05 02:01:02] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-06-05 02:01:02] Running cvmfs_config stat atlas.cern.ch
[2025-06-05 02:01:02] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-06-05 02:01:02] 2.11.2.0 31313 33889 90672 146798 1 202 19468250 25165825 4019 130560 0 18723995 99.799 19912761 2169 http://s1cern-cvmfs.openhtc.io/cvmfs/atlas.cern.ch http://192.168.73.11:3128/ 1
[2025-06-05 02:01:02] CVMFS is ok
[2025-06-05 02:01:02] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-06-05 02:01:02] Checking for apptainer binary...
[2025-06-05 02:01:02] Using apptainer found in PATH at /usr/bin/apptainer
[2025-06-05 02:01:02] Running /usr/bin/apptainer --version
[2025-06-05 02:01:02] apptainer version 1.3.2-1.el7
[2025-06-05 02:01:02] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-06-05 02:01:04] cg-vwn451.simple-grid.lan
[2025-06-05 02:01:04] apptainer works
[2025-06-05 02:01:04] Set ATHENA_PROC_NUMBER=8
[2025-06-05 02:01:04] Set ATHENA_CORE_NUMBER=8
[2025-06-05 02:01:04] Starting ATLAS job with PandaID=6667307628
[2025-06-05 02:01:04] Running command: /usr/bin/apptainer exec -B /cvmfs,/var/lib/boinc/slots/25 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-06-05 07:52:01]  *** The last 200 lines of the pilot log: ***
[2025-06-05 07:52:01] 2025-06-05 05:35:06,261 | WARNING  | format EVNTtoHITS has no such key: dbData
[2025-06-05 07:52:01] 2025-06-05 05:35:06,261 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2025-06-05 07:52:01] 2025-06-05 05:35:06,268 | INFO     | fitting pss+swap vs Time
[2025-06-05 07:52:01] 2025-06-05 05:35:06,269 | INFO     | sum of square deviations: 10743038637.5
[2025-06-05 07:52:01] 2025-06-05 05:35:06,273 | INFO     | sum of deviations: 58204313391.99999
[2025-06-05 07:52:01] 2025-06-05 05:35:06,273 | INFO     | mean x: 1749091657.5
[2025-06-05 07:52:01] 2025-06-05 05:35:06,273 | INFO     | mean y: 2481679.2576687117
[2025-06-05 07:52:01] 2025-06-05 05:35:06,273 | INFO     | -- intersect: -9473857596.773602
[2025-06-05 07:52:01] 2025-06-05 05:35:06,273 | INFO     | intersect: -9473857596.773602
[2025-06-05 07:52:01] 2025-06-05 05:35:06,274 | INFO     | chi2: 2.2310291865842027
[2025-06-05 07:52:01] 2025-06-05 05:35:06,275 | INFO     | sum of square deviations: 10256266720.0
[2025-06-05 07:52:01] 2025-06-05 05:35:06,278 | INFO     | sum of deviations: 78679637319.99998
[2025-06-05 07:52:01] 2025-06-05 05:35:06,278 | INFO     | mean x: 1749091505.0
[2025-06-05 07:52:01] 2025-06-05 05:35:06,278 | INFO     | mean y: 2488009.8224299066
[2025-06-05 07:52:01] 2025-06-05 05:35:06,278 | INFO     | -- intersect: -13415443583.603695
[2025-06-05 07:52:01] 2025-06-05 05:35:06,279 | INFO     | intersect: -13415443583.603695
[2025-06-05 07:52:01] 2025-06-05 05:35:06,279 | INFO     | chi2: 1.4614410248408656
[2025-06-05 07:52:01] 2025-06-05 05:35:06,279 | INFO     | current chi2=1.4614410248408656 (change=34.49475992385416 %)
[2025-06-05 07:52:01] 2025-06-05 05:35:06,280 | INFO     | sum of square deviations: 9784425315.0
[2025-06-05 07:52:01] 2025-06-05 05:35:06,283 | INFO     | sum of deviations: 77215581779.50003
[2025-06-05 07:52:01] 2025-06-05 05:35:06,284 | INFO     | mean x: 1749091352.5
[2025-06-05 07:52:01] 2025-06-05 05:35:06,284 | INFO     | mean y: 2487536.5981012657
[2025-06-05 07:52:01] 2025-06-05 05:35:06,284 | INFO     | -- intersect: -13800786750.930157
[2025-06-05 07:52:01] 2025-06-05 05:35:06,284 | INFO     | intersect: -13800786750.930157
[2025-06-05 07:52:01] 2025-06-05 05:35:06,284 | INFO     | chi2: 1.4613346912824978
[2025-06-05 07:52:01] 2025-06-05 05:35:06,285 | INFO     | current chi2=1.4613346912824978 (change=0.007275939060170659 %)
[2025-06-05 07:52:01] 2025-06-05 05:35:06,285 | INFO     | right removable region: 315
[2025-06-05 07:52:01] 2025-06-05 05:35:06,285 | INFO     | sum of square deviations: 10256266720.0
[2025-06-05 07:52:01] 2025-06-05 05:35:06,289 | INFO     | sum of deviations: 5790655031.0
[2025-06-05 07:52:01] 2025-06-05 05:35:06,289 | INFO     | mean x: 1749091810.0
[2025-06-05 07:52:01] 2025-06-05 05:35:06,289 | INFO     | mean y: 2497997.2679127725
[2025-06-05 07:52:01] 2025-06-05 05:35:06,289 | INFO     | -- intersect: -985033583.7416533
[2025-06-05 07:52:01] 2025-06-05 05:35:06,289 | INFO     | intersect: -985033583.7416533
[2025-06-05 07:52:01] 2025-06-05 05:35:06,290 | INFO     | chi2: 0.7966431366341491
[2025-06-05 07:52:01] 2025-06-05 05:35:06,290 | INFO     | current chi2=0.7966431366341491 (change=64.29257217141823 %)
[2025-06-05 07:52:01] 2025-06-05 05:35:06,290 | INFO     | sum of square deviations: 9784425315.0
[2025-06-05 07:52:01] 2025-06-05 05:35:06,294 | INFO     | sum of deviations: 2054470606.0
[2025-06-05 07:52:01] 2025-06-05 05:35:06,294 | INFO     | mean x: 1749091962.5
[2025-06-05 07:52:01] 2025-06-05 05:35:06,294 | INFO     | mean y: 2499204.4493670887
[2025-06-05 07:52:01] 2025-06-05 05:35:06,294 | INFO     | -- intersect: -364763859.9064064
[2025-06-05 07:52:01] 2025-06-05 05:35:06,295 | INFO     | intersect: -364763859.9064064
[2025-06-05 07:52:01] 2025-06-05 05:35:06,295 | INFO     | chi2: 0.79370470901678
[2025-06-05 07:52:01] 2025-06-05 05:35:06,295 | INFO     | current chi2=0.79370470901678 (change=0.36885118094207736 %)
[2025-06-05 07:52:01] 2025-06-05 05:35:06,295 | INFO     | left removable region: 20
[2025-06-05 07:52:01] 2025-06-05 05:35:06,296 | INFO     | sum of square deviations: 7960484140.0
[2025-06-05 07:52:01] 2025-06-05 05:35:06,299 | INFO     | sum of deviations: 16772449651.0
[2025-06-05 07:52:01] 2025-06-05 05:35:06,299 | INFO     | mean x: 1749091932.0
[2025-06-05 07:52:01] 2025-06-05 05:35:06,299 | INFO     | mean y: 2507728.8542372882
[2025-06-05 07:52:01] 2025-06-05 05:35:06,299 | INFO     | -- intersect: -3682765157.631322
[2025-06-05 07:52:01] 2025-06-05 05:35:06,299 | INFO     | intersect: -3682765157.631322
[2025-06-05 07:52:01] 2025-06-05 05:35:06,300 | INFO     | chi2: 0.002051938465139936
[2025-06-05 07:52:01] 2025-06-05 05:35:06,300 | INFO     | -- intersect: -3682765157.631322
[2025-06-05 07:52:01] 2025-06-05 05:35:06,300 | INFO     | current memory leak: 2.11 B/s (using 295 data points, chi2=0.00)
[2025-06-05 07:52:01] 2025-06-05 05:35:06,301 | INFO     | ..............................
[2025-06-05 07:52:01] 2025-06-05 05:35:06,302 | INFO     | . Timing measurements:
[2025-06-05 07:52:01] 2025-06-05 05:35:06,302 | INFO     | . get job = 0 s
[2025-06-05 07:52:01] 2025-06-05 05:35:06,302 | INFO     | . initial setup = 2 s
[2025-06-05 07:52:01] 2025-06-05 05:35:06,302 | INFO     | . payload setup = 14 s
[2025-06-05 07:52:01] 2025-06-05 05:35:06,302 | INFO     | . stage-in = 0 s
[2025-06-05 07:52:01] 2025-06-05 05:35:06,302 | INFO     | . payload execution = 19888 s
[2025-06-05 07:52:01] 2025-06-05 05:35:06,302 | INFO     | . stage-out = 3 s
[2025-06-05 07:52:01] 2025-06-05 05:35:06,302 | INFO     | . log creation = 1 s
[2025-06-05 07:52:01] 2025-06-05 05:35:06,302 | INFO     | ..............................
[2025-06-05 07:52:01] 2025-06-05 05:35:06,434 | INFO     | 
[2025-06-05 07:52:01] 2025-06-05 05:35:06,434 | INFO     | job summary report
[2025-06-05 07:52:01] 2025-06-05 05:35:06,435 | INFO     | --------------------------------------------------
[2025-06-05 07:52:01] 2025-06-05 05:35:06,435 | INFO     | PanDA job id: 6667307628
[2025-06-05 07:52:01] 2025-06-05 05:35:06,435 | INFO     | task id: 44871837
[2025-06-05 07:52:01] 2025-06-05 05:35:06,435 | INFO     | errors: (none)
[2025-06-05 07:52:01] 2025-06-05 05:35:06,435 | INFO     | status: LOG_TRANSFER = DONE 
[2025-06-05 07:52:01] 2025-06-05 05:35:06,435 | INFO     | pilot state: finished 
[2025-06-05 07:52:01] 2025-06-05 05:35:06,435 | INFO     | transexitcode: 0
[2025-06-05 07:52:01] 2025-06-05 05:35:06,435 | INFO     | exeerrorcode: 0
[2025-06-05 07:52:01] 2025-06-05 05:35:06,435 | INFO     | exeerrordiag: 
[2025-06-05 07:52:01] 2025-06-05 05:35:06,435 | INFO     | exitcode: 0
[2025-06-05 07:52:01] 2025-06-05 05:35:06,435 | INFO     | exitmsg: OK
[2025-06-05 07:52:01] 2025-06-05 05:35:06,435 | INFO     | cpuconsumptiontime: 74148 s
[2025-06-05 07:52:01] 2025-06-05 05:35:06,436 | INFO     | nevents: 400
[2025-06-05 07:52:01] 2025-06-05 05:35:06,436 | INFO     | neventsw: 0
[2025-06-05 07:52:01] 2025-06-05 05:35:06,436 | INFO     | pid: 12072
[2025-06-05 07:52:01] 2025-06-05 05:35:06,436 | INFO     | pgrp: 12072
[2025-06-05 07:52:01] 2025-06-05 05:35:06,436 | INFO     | corecount: 8
[2025-06-05 07:52:01] 2025-06-05 05:35:06,436 | INFO     | event service: False
[2025-06-05 07:52:01] 2025-06-05 05:35:06,436 | INFO     | sizes: {0: 2397393, 1: 2397393, 11: 2397627, 12: 2397655, 19907: 2429791, 19911: 2438734, 19914: 2438918, 19998: 2439088}
[2025-06-05 07:52:01] 2025-06-05 05:35:06,436 | INFO     | --------------------------------------------------
[2025-06-05 07:52:01] 2025-06-05 05:35:06,436 | INFO     | 
[2025-06-05 07:52:01] 2025-06-05 05:35:06,437 | INFO     | executing command: ls -lF /var/lib/boinc/slots/25
[2025-06-05 07:52:01] 2025-06-05 05:35:06,470 | INFO     | queue jobs had 0 job(s) [purged]
[2025-06-05 07:52:01] 2025-06-05 05:35:06,470 | INFO     | queue payloads had 0 job(s) [purged]
[2025-06-05 07:52:01] 2025-06-05 05:35:06,470 | INFO     | queue data_in had 0 job(s) [purged]
[2025-06-05 07:52:01] 2025-06-05 05:35:06,470 | INFO     | queue data_out had 0 job(s) [purged]
[2025-06-05 07:52:01] 2025-06-05 05:35:06,471 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-06-05 07:52:01] 2025-06-05 05:35:06,471 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-06-05 07:52:01] 2025-06-05 05:35:06,471 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-06-05 07:52:01] 2025-06-05 05:35:06,471 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-06-05 07:52:01] 2025-06-05 05:35:06,471 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-06-05 07:52:01] 2025-06-05 05:35:06,471 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-06-05 07:52:01] 2025-06-05 05:35:06,471 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-06-05 07:52:01] 2025-06-05 05:35:06,471 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-06-05 07:52:01] 2025-06-05 05:35:06,471 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-06-05 07:52:01] 2025-06-05 05:35:06,471 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-06-05 07:52:01] 2025-06-05 05:35:06,471 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-06-05 07:52:01] 2025-06-05 05:35:06,472 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-06-05 07:52:01] 2025-06-05 05:35:06,472 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-06-05 07:52:01] 2025-06-05 05:35:06,472 | INFO     | queue completed_jobids has 1 job(s)
[2025-06-05 07:52:01] 2025-06-05 05:35:06,472 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-06-05 07:52:01] 2025-06-05 05:35:06,472 | INFO     | queue messages had 0 job(s) [purged]
[2025-06-05 07:52:01] 2025-06-05 05:35:06,472 | INFO     | job 6667307628 has completed (purged errors)
[2025-06-05 07:52:01] 2025-06-05 05:35:06,473 | INFO     | overall cleanup function is called
[2025-06-05 07:52:01] 2025-06-05 05:35:07,482 | INFO     | --- collectZombieJob: --- 10, [12072]
[2025-06-05 07:52:01] 2025-06-05 05:35:07,482 | INFO     | zombie collector waiting for pid 12072
[2025-06-05 07:52:01] 2025-06-05 05:35:07,483 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-06-05 07:52:01] 2025-06-05 05:35:07,483 | INFO     | collected zombie processes
[2025-06-05 07:52:01] 2025-06-05 05:35:07,483 | INFO     | will attempt to kill all subprocesses of pid=12072
[2025-06-05 07:52:01] 2025-06-05 05:35:07,591 | INFO     | process IDs to be killed: [12072] (in reverse order)
[2025-06-05 07:52:01] 2025-06-05 05:35:08,365 | WARNING  | found no corresponding commands to process id(s)
[2025-06-05 07:52:01] 2025-06-05 05:35:08,366 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-06-05 07:52:01] 2025-06-05 05:35:08,370 | INFO     | did not find any defunct processes belonging to 12072
[2025-06-05 07:52:01] 2025-06-05 05:35:08,375 | INFO     | did not find any defunct processes belonging to 12072
[2025-06-05 07:52:01] 2025-06-05 05:35:08,375 | INFO     | ready for new job
[2025-06-05 07:52:01] 2025-06-05 05:35:08,375 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-06-05 07:52:01] 2025-06-05 05:35:08,386 | INFO     | **************************************
[2025-06-05 07:52:01] 2025-06-05 05:35:08,387 | INFO     | ***  PanDA Pilot version 3.10.2.2  ***
[2025-06-05 07:52:01] 2025-06-05 05:35:08,387 | INFO     | **************************************
[2025-06-05 07:52:01] 2025-06-05 05:35:08,387 | INFO     | 
[2025-06-05 07:52:01] 2025-06-05 05:35:08,388 | INFO     | pilot is running in a VM
[2025-06-05 07:52:01] 2025-06-05 05:35:08,388 | INFO     | architecture information:
[2025-06-05 07:52:01] 2025-06-05 05:35:08,402 | INFO     | executing command: cat /etc/os-release
[2025-06-05 07:52:01] 2025-06-05 05:35:08,680 | INFO     | PID=3479 has CPU usage=2.7% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i PR -
[2025-06-05 07:52:01] 2025-06-05 05:35:08,680 | INFO     | .. there are 9 such processes running
[2025-06-05 07:52:01] 2025-06-05 05:35:08,683 | INFO     | cat /etc/os-release:
[2025-06-05 07:52:01] NAME="CentOS Linux"
[2025-06-05 07:52:01] VERSION="7 (Core)"
[2025-06-05 07:52:01] ID="centos"
[2025-06-05 07:52:01] ID_LIKE="rhel fedora"
[2025-06-05 07:52:01] VERSION_ID="7"
[2025-06-05 07:52:01] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-06-05 07:52:01] ANSI_COLOR="0;31"
[2025-06-05 07:52:01] CPE_NAME="cpe:/o:centos:centos:7"
[2025-06-05 07:52:01] HOME_URL="https://www.centos.org/"
[2025-06-05 07:52:01] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-06-05 07:52:01] 
[2025-06-05 07:52:01] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-06-05 07:52:01] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-06-05 07:52:01] REDHAT_SUPPORT_PRODUCT="centos"
[2025-06-05 07:52:01] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-06-05 07:52:01] 
[2025-06-05 07:52:01] 2025-06-05 05:35:08,683 | INFO     | **************************************
[2025-06-05 07:52:01] 2025-06-05 05:35:09,186 | INFO     | executing command: df -mP /var/lib/boinc/slots/25
[2025-06-05 07:52:01] 2025-06-05 05:35:09,336 | INFO     | sufficient remaining disk space (496777560064 B)
[2025-06-05 07:52:01] 2025-06-05 05:35:09,336 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-06-05 07:52:01] 2025-06-05 05:35:09,337 | INFO     | current server update state: UPDATING_FINAL
[2025-06-05 07:52:01] 2025-06-05 05:35:09,337 | INFO     | update_server=False
[2025-06-05 07:52:01] 2025-06-05 05:35:09,337 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-06-05 07:52:01] 2025-06-05 05:35:09,337 | WARNING  | aborting monitor loop since graceful_stop has been set (timing out remaining threads)
[2025-06-05 07:52:01] 2025-06-05 05:35:09,337 | INFO     | found 0 job(s) in 20 queues
[2025-06-05 07:52:01] 2025-06-05 05:35:09,337 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-06-05 07:52:01] 2025-06-05 05:35:09,338 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-06-05 07:52:01] 2025-06-05 05:35:09,344 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-06-05 07:52:01] 2025-06-05 05:35:09,604 | INFO     | all data control threads have been joined
[2025-06-05 07:52:01] 2025-06-05 05:35:09,617 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-06-05 07:52:01] 2025-06-05 05:35:09,618 | INFO     | aborting loop
[2025-06-05 07:52:01] 2025-06-05 05:35:09,621 | INFO     | all job control threads have been joined
[2025-06-05 07:52:01] 2025-06-05 05:35:10,164 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-06-05 07:52:01] 2025-06-05 05:35:10,342 | INFO     | [job] retrieve thread has finished
[2025-06-05 07:52:01] 2025-06-05 05:35:10,394 | INFO     | all payload control threads have been joined
[2025-06-05 07:52:01] 2025-06-05 05:35:10,610 | INFO     | [data] control thread has finished
[2025-06-05 07:52:01] 2025-06-05 05:35:10,618 | INFO     | [payload] execute_payloads thread has finished
[2025-06-05 07:52:01] 2025-06-05 05:35:10,619 | INFO     | [job] create_data_payload thread has finished
[2025-06-05 07:52:01] 2025-06-05 05:35:10,619 | INFO     | [data] copytool_in thread has finished
[2025-06-05 07:52:01] 2025-06-05 05:35:10,622 | INFO     | [payload] failed_post thread has finished
[2025-06-05 07:52:01] 2025-06-05 05:35:10,623 | INFO     | [job] job monitor thread has finished
[2025-06-05 07:52:01] 2025-06-05 05:35:10,627 | INFO     | [job] control thread has finished
[2025-06-05 07:52:01] 2025-06-05 05:35:11,193 | INFO     | [payload] validate_post thread has finished
[2025-06-05 07:52:01] 2025-06-05 05:35:11,194 | INFO     | [job] validate thread has finished
[2025-06-05 07:52:01] 2025-06-05 05:35:11,400 | INFO     | [payload] control thread has finished
[2025-06-05 07:52:01] 2025-06-05 05:35:11,478 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-06-05 07:52:01] 2025-06-05 05:35:11,772 | INFO     | [payload] validate_pre thread has finished
[2025-06-05 07:52:01] 2025-06-05 05:35:12,171 | INFO     | [data] copytool_out thread has finished
[2025-06-05 07:52:01] 2025-06-05 05:35:12,484 | INFO     | [job] queue monitor thread has finished
[2025-06-05 07:52:01] 2025-06-05 05:35:13,354 | INFO     | [data] queue_monitor thread has finished
[2025-06-05 07:52:01] 2025-06-05 05:35:19,488 | INFO     | job.realtimelogging is not enabled
[2025-06-05 07:52:01] 2025-06-05 05:35:20,493 | INFO     | [payload] run_realtimelog thread has finished
[2025-06-05 07:52:01] 2025-06-05 05:35:20,559 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 139859807524672)>', '<ExcThread(monitor, started 139859217864448)>']
[2025-06-05 07:52:01] 2025-06-05 05:35:21,409 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-06-05 07:52:01] 2025-06-05 05:35:21,409 | INFO     | [monitor] control thread has ended
[2025-06-05 07:52:01] 2025-06-05 05:35:25,584 | INFO     | all workflow threads have been joined
[2025-06-05 07:52:01] 2025-06-05 05:35:25,585 | INFO     | end of generic workflow (traces error code: 0)
[2025-06-05 07:52:01] 2025-06-05 05:35:25,585 | INFO     | traces error code: 0
[2025-06-05 07:52:01] 2025-06-05 05:35:25,585 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-06-05 07:52:01] 2025-06-05 05:35:26,074 [wrapper] ==== pilot stdout END ====
[2025-06-05 07:52:01] 2025-06-05 05:35:26,129 [wrapper] ==== wrapper stdout RESUME ====
[2025-06-05 07:52:01] 2025-06-05 05:35:26,208 [wrapper] pilotpid: 3479
[2025-06-05 07:52:01] 2025-06-05 05:35:26,251 [wrapper] Pilot exit status: 0
[2025-06-05 07:52:01] 2025-06-05 05:35:26,665 [wrapper] pandaids: 6667307628
[2025-06-05 07:52:01] 2025-06-05 05:35:27,253 [wrapper] cleanup supervisor_pilot  8384 3480
[2025-06-05 07:52:01] 2025-06-05 05:35:27,333 [wrapper] Test setup, not cleaning
[2025-06-05 07:52:01] 2025-06-05 05:35:27,375 [wrapper] apfmon messages muted
[2025-06-05 07:52:01] 2025-06-05 05:35:27,422 [wrapper] ==== wrapper stdout END ====
[2025-06-05 07:52:01] 2025-06-05 05:35:27,495 [wrapper] ==== wrapper stderr END ====
[2025-06-05 07:52:01]  *** Error codes and diagnostics ***
[2025-06-05 07:52:01]     "exeErrorCode": 0,
[2025-06-05 07:52:01]     "exeErrorDiag": "",
[2025-06-05 07:52:01]     "pilotErrorCode": 0,
[2025-06-05 07:52:01]     "pilotErrorDiag": "",
[2025-06-05 07:52:01]  *** Listing of results directory ***
[2025-06-05 07:52:01] total 422860
[2025-06-05 07:52:01] -rw-r--r--. 1 boinc boinc    495897 May 27 18:39 pilot3.tar.gz
[2025-06-05 07:52:01] -rw-r--r--. 1 boinc boinc      5111 May 27 18:50 queuedata.json
[2025-06-05 07:52:01] -rwx------. 1 boinc boinc     37140 May 27 18:52 runpilot2-wrapper.sh
[2025-06-05 07:52:01] -rw-r--r--. 1 boinc boinc       100 Jun  5 02:01 wrapper_26015_x86_64-pc-linux-gnu
[2025-06-05 07:52:01] -rwxr-xr-x. 1 boinc boinc      7986 Jun  5 02:01 run_atlas
[2025-06-05 07:52:01] -rw-r--r--. 1 boinc boinc       105 Jun  5 02:01 job.xml
[2025-06-05 07:52:01] -rw-r--r--. 2 boinc boinc 223317567 Jun  5 02:01 EVNT.44871834._002773.pool.root.1
[2025-06-05 07:52:01] drwxrwx--x. 2 boinc boinc        68 Jun  5 02:01 shared
[2025-06-05 07:52:01] -rw-r--r--. 2 boinc boinc    508877 Jun  5 02:01 input.tar.gz
[2025-06-05 07:52:01] -rw-r--r--. 1 boinc boinc      6393 Jun  5 02:01 init_data.xml
[2025-06-05 07:52:01] -rw-r--r--. 2 boinc boinc     15093 Jun  5 02:01 start_atlas.sh
[2025-06-05 07:52:01] -rw-r--r--. 1 boinc boinc         0 Jun  5 02:01 boinc_lockfile
[2025-06-05 07:52:01] -rw-r--r--. 1 boinc boinc      2559 Jun  5 02:01 pandaJob.out
[2025-06-05 07:52:01] -rw-------. 1 boinc boinc    987117 Jun  5 02:01 agis_schedconf.cvmfs.json
[2025-06-05 07:52:01] drwx------. 4 boinc boinc      4096 Jun  5 02:01 pilot3
[2025-06-05 07:52:01] -rw-------. 1 boinc boinc 201601823 Jun  5 07:32 HITS.44871837._070544.pool.root.1
[2025-06-05 07:52:01] -rw-r--r--. 1 boinc boinc       531 Jun  5 07:32 boinc_task_state.xml
[2025-06-05 07:52:01] -rw-------. 1 boinc boinc      1019 Jun  5 07:33 memory_monitor_summary.json
[2025-06-05 07:52:01] -rw-------. 1 boinc boinc   1598969 Jun  5 07:33 agis_ddmendpoints.agis.ALL.json
[2025-06-05 07:52:01] -rw-------. 1 boinc boinc    427229 Jun  5 07:33 log.44871837._070544.job.log.tgz.1
[2025-06-05 07:52:01] -rw-------. 1 boinc boinc        95 Jun  5 07:34 pilot_heartbeat.json
[2025-06-05 07:52:01] -rw-------. 1 boinc boinc      7688 Jun  5 07:35 heartbeat.json
[2025-06-05 07:52:01] -rw-------. 1 boinc boinc      5003 Jun  5 07:35 pilotlog.txt
[2025-06-05 07:52:01] -rw-------. 1 boinc boinc   1708819 Jun  5 07:35 log.44871837._070544.job.log.1
[2025-06-05 07:52:01] -rw-------. 1 boinc boinc       357 Jun  5 07:35 output.list
[2025-06-05 07:52:01] -rw-r--r--. 1 boinc boinc       620 Jun  5 07:35 runtime_log
[2025-06-05 07:52:01] -rw-------. 1 boinc boinc   2150400 Jun  5 07:35 result.tar.gz
[2025-06-05 07:52:01] -rw-r--r--. 1 boinc boinc      8673 Jun  5 07:35 runtime_log.err
[2025-06-05 07:52:01] -rw-------. 1 boinc boinc       658 Jun  5 07:35 leJODmViCe7nsSi4ap6QjLDmwznN0nGgGQJmUXzaDmIvZKDmrATfxm.diag
[2025-06-05 07:52:01] -rw-r--r--. 1 boinc boinc      8192 Jun  5 07:52 boinc_mmap_file
[2025-06-05 07:52:01] -rw-r--r--. 1 boinc boinc        28 Jun  5 07:52 wrapper_checkpoint.txt
[2025-06-05 07:52:01] -rw-r--r--. 1 boinc boinc     20584 Jun  5 07:52 stderr.txt
[2025-06-05 07:52:01] HITS file was successfully produced:
[2025-06-05 07:52:01] -rw-------. 1 boinc boinc 201601823 Jun  5 07:32 shared/HITS.pool.root.1
[2025-06-05 07:52:01]  *** Contents of shared directory: ***
[2025-06-05 07:52:01] total 417580
[2025-06-05 07:52:01] -rw-r--r--. 2 boinc boinc 223317567 Jun  5 02:01 ATLAS.root_0
[2025-06-05 07:52:01] -rw-r--r--. 2 boinc boinc    508877 Jun  5 02:01 input.tar.gz
[2025-06-05 07:52:01] -rw-r--r--. 2 boinc boinc     15093 Jun  5 02:01 start_atlas.sh
[2025-06-05 07:52:01] -rw-------. 1 boinc boinc 201601823 Jun  5 07:32 HITS.pool.root.1
[2025-06-05 07:52:01] -rw-------. 1 boinc boinc   2150400 Jun  5 07:35 result.tar.gz
07:52:03 (32211): run_atlas exited; CPU time 74404.729133
07:52:03 (32211): called boinc_finish(0)

</stderr_txt>
]]>

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