Stderr output

<core_client_version>8.1.0</core_client_version>
<![CDATA[
<stderr_txt>
11:27:42 (502164): wrapper (7.7.26015): starting
11:27:42 (502164): wrapper: running run_atlas (--nthreads 8)
[2025-06-04 11:27:42] Arguments: --nthreads 8
[2025-06-04 11:27:42] Threads: 8
[2025-06-04 11:27:42] Checking for CVMFS
[2025-06-04 11:27:42] Probing /cvmfs/atlas.cern.ch... OK
[2025-06-04 11:27:42] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-06-04 11:27:42] Running cvmfs_config stat atlas.cern.ch
[2025-06-04 11:27:42] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-06-04 11:27:42] 2.12.6.0 3451353 23423 463944 146786 2 318 21064556 32935936 9409 16776704 0 135570380 99.722 101462972 26209 http://cvmfs-s1fnal.opensciencegrid.org:8000/cvmfs/atlas.cern.ch http://192.41.231.237:6081 1
[2025-06-04 11:27:42] CVMFS is ok
[2025-06-04 11:27:42] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-06-04 11:27:42] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2025-06-04 11:27:42] Further information can be found at the LHC@home message board.
[2025-06-04 11:27:42] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-06-04 11:27:42] Checking for apptainer binary...
[2025-06-04 11:27:42] Using apptainer found in PATH at /usr/bin/apptainer
[2025-06-04 11:27:42] Running /usr/bin/apptainer --version
[2025-06-04 11:27:42] apptainer version 1.4.1-1.el9
[2025-06-04 11:27:42] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-06-04 11:27:42] c6-12-27-2.aglt2.org
[2025-06-04 11:27:42] apptainer works
[2025-06-04 11:27:42] Set ATHENA_PROC_NUMBER=8
[2025-06-04 11:27:42] Set ATHENA_CORE_NUMBER=8
[2025-06-04 11:27:42] Starting ATLAS job with PandaID=6679517972
[2025-06-04 11:27:42] Running command: /usr/bin/apptainer exec -B /cvmfs,/tmp/boinchome/slots/1 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-06-04 12:25:55]  *** The last 200 lines of the pilot log: ***
[2025-06-04 12:25:55]  is_tar=False
[2025-06-04 12:25:55]  lfn=log.45006595._056424.job.log.tgz.1
[2025-06-04 12:25:55]  mtime=0
[2025-06-04 12:25:55]  protocol_id=None
[2025-06-04 12:25:55]  protocols=[{'endpoint': 'davs://dav.ndgf.org:443', 'flavour': 'WEBDAV', 'id': 331, 'path': '/atlas/disk/atlasdatadisk/rucio/'}]
[2025-06-04 12:25:55]  replicas=None
[2025-06-04 12:25:55]  scope=mc23_13p6TeV
[2025-06-04 12:25:55]  status=None
[2025-06-04 12:25:55]  status_code=0
[2025-06-04 12:25:55]  storage_token=
[2025-06-04 12:25:55]  surl=/tmp/boinchome/slots/1/PanDA_Pilot-6679517972/log.45006595._056424.job.log.tgz.1
[2025-06-04 12:25:55]  turl=davs://dav.ndgf.org:443/atlas/disk/atlasdatadisk/rucio/mc23_13p6TeV/88/ee/log.45006595._056424.job.log.tgz.1
[2025-06-04 12:25:55]  workdir=None
[2025-06-04 12:25:55] ]
[2025-06-04 12:25:55] 2025-06-04 16:25:28,200 | INFO     | transferring file log.45006595._056424.job.log.tgz.1 from /tmp/boinchome/slots/1/PanDA_Pilot-6679517972/log.45006595._056424.job.log.tgz.1 to /tmp/boinchome/slots/
[2025-06-04 12:25:55] 2025-06-04 16:25:28,200 | INFO     | executing command: /usr/bin/env mv /tmp/boinchome/slots/1/PanDA_Pilot-6679517972/log.45006595._056424.job.log.tgz.1 /tmp/boinchome/slots/1/log.45006595._056424.job
[2025-06-04 12:25:55] 2025-06-04 16:25:28,215 | INFO     | adding to output.list: log.45006595._056424.job.log.tgz.1 davs://dav.ndgf.org:443/atlas/disk/atlasdatadisk/rucio/mc23_13p6TeV/88/ee/log.45006595._056424.job.log.tg
[2025-06-04 12:25:55] 2025-06-04 16:25:28,216 | INFO     | alt stage-out settings: ['pl', 'write_lan', 'w', 'default'], allow_altstageout=False, remain_files=0, has_altstorage=True
[2025-06-04 12:25:55] 2025-06-04 16:25:28,216 | INFO     | summary of transferred files:
[2025-06-04 12:25:55] 2025-06-04 16:25:28,216 | INFO     |  -- lfn=log.45006595._056424.job.log.tgz.1, status_code=0, status=transferred
[2025-06-04 12:25:55] 2025-06-04 16:25:28,216 | INFO     | stage-out finished correctly
[2025-06-04 12:25:55] 2025-06-04 16:25:29,009 | INFO     | monitor loop #259: job 0:6679517972 is in state 'finished'
[2025-06-04 12:25:55] 2025-06-04 16:25:29,009 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-06-04 12:25:55] 2025-06-04 16:25:30,517 | INFO     | finished stage-out for finished payload, adding job to finished_jobs queue
[2025-06-04 12:25:55] 2025-06-04 16:25:31,512 | INFO     | monitor loop #260: job 0:6679517972 is in state 'finished'
[2025-06-04 12:25:55] 2025-06-04 16:25:31,513 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-06-04 12:25:55] 2025-06-04 16:25:32,679 | INFO     | PID=508605 has CPU usage=10.9% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i P
[2025-06-04 12:25:55] 2025-06-04 16:25:32,679 | INFO     | .. there are 13 such processes running
[2025-06-04 12:25:55] 2025-06-04 16:25:33,178 | INFO     | job 6679517972 has state=finished
[2025-06-04 12:25:55] 2025-06-04 16:25:33,179 | INFO     | preparing for final server update for job 6679517972 in state='finished'
[2025-06-04 12:25:55] 2025-06-04 16:25:33,237 | INFO     | sent prmon JSON dictionary to logstash server (urllib method)
[2025-06-04 12:25:55] 2025-06-04 16:25:33,237 | INFO     | this job has now completed (state=finished)
[2025-06-04 12:25:55] 2025-06-04 16:25:33,237 | INFO     | pilot will not update the server (heartbeat message will be written to file)
[2025-06-04 12:25:55] 2025-06-04 16:25:33,237 | INFO     | log transfer has been attempted: DONE
[2025-06-04 12:25:55] 2025-06-04 16:25:33,237 | INFO     | job 6679517972 has finished - writing final server update
[2025-06-04 12:25:55] 2025-06-04 16:25:33,238 | INFO     | total number of processed events: 400 (read)
[2025-06-04 12:25:55] 2025-06-04 16:25:33,253 | INFO     | executing command: lscpu
[2025-06-04 12:25:55] 2025-06-04 16:25:33,327 | INFO     | executing command: export ATLAS_LOCAL_ROOT_BASE=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase;source ${ATLAS_LOCAL_ROOT_BASE}/user/atlasLocalSetup.sh --quiet;lsetup
[2025-06-04 12:25:55] 2025-06-04 16:25:34,016 | INFO     | monitor loop #261: job 0:6679517972 is in state 'finished'
[2025-06-04 12:25:55] 2025-06-04 16:25:34,016 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-06-04 12:25:55] 2025-06-04 16:25:36,137 | INFO     | CPU arch script returned: x86-64-v4
[2025-06-04 12:25:55] 2025-06-04 16:25:36,137 | INFO     | using path: /tmp/boinchome/slots/1/PanDA_Pilot-6679517972/memory_monitor_summary.json (trf name=prmon)
[2025-06-04 12:25:55] 2025-06-04 16:25:36,138 | INFO     | extracted standard info from prmon json
[2025-06-04 12:25:55] 2025-06-04 16:25:36,139 | INFO     | extracted standard memory fields from prmon json
[2025-06-04 12:25:55] 2025-06-04 16:25:36,139 | WARNING  | GPU info not found in prmon json: 'gpu'
[2025-06-04 12:25:55] 2025-06-04 16:25:36,139 | WARNING  | format EVNTtoHITS has no such key: dbData
[2025-06-04 12:25:55] 2025-06-04 16:25:36,139 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2025-06-04 12:25:55] 2025-06-04 16:25:36,141 | INFO     | fitting pss+swap vs Time
[2025-06-04 12:25:55] 2025-06-04 16:25:36,141 | INFO     | sum of square deviations: 38744912.5
[2025-06-04 12:25:55] 2025-06-04 16:25:36,141 | INFO     | sum of deviations: -2431107603.0
[2025-06-04 12:25:55] 2025-06-04 16:25:36,141 | INFO     | mean x: 1749052690.5
[2025-06-04 12:25:55] 2025-06-04 16:25:36,141 | INFO     | mean y: 2360488.72
[2025-06-04 12:25:55] 2025-06-04 16:25:36,142 | INFO     | -- intersect: 109749292913.00038
[2025-06-04 12:25:55] 2025-06-04 16:25:36,142 | INFO     | intersect: 109749292913.00038
[2025-06-04 12:25:55] 2025-06-04 16:25:36,142 | INFO     | chi2: 0.043299723653479255
[2025-06-04 12:25:55] 2025-06-04 16:25:36,142 | INFO     | -- intersect: 109749292913.00038
[2025-06-04 12:25:55] 2025-06-04 16:25:36,142 | INFO     | current memory leak: -62.75 B/s (using 50 data points, chi2=0.04)
[2025-06-04 12:25:55] 2025-06-04 16:25:36,142 | INFO     | ..............................
[2025-06-04 12:25:55] 2025-06-04 16:25:36,143 | INFO     | . Timing measurements:
[2025-06-04 12:25:55] 2025-06-04 16:25:36,143 | INFO     | . get job = 0 s
[2025-06-04 12:25:55] 2025-06-04 16:25:36,143 | INFO     | . initial setup = 2 s
[2025-06-04 12:25:55] 2025-06-04 16:25:36,143 | INFO     | . payload setup = 3 s
[2025-06-04 12:25:55] 2025-06-04 16:25:36,143 | INFO     | . stage-in = 0 s
[2025-06-04 12:25:55] 2025-06-04 16:25:36,143 | INFO     | . payload execution = 3436 s
[2025-06-04 12:25:55] 2025-06-04 16:25:36,143 | INFO     | . stage-out = 0 s
[2025-06-04 12:25:55] 2025-06-04 16:25:36,143 | INFO     | . log creation = 0 s
[2025-06-04 12:25:55] 2025-06-04 16:25:36,143 | INFO     | ..............................
[2025-06-04 12:25:55] 2025-06-04 16:25:36,683 | INFO     | 
[2025-06-04 12:25:55] 2025-06-04 16:25:36,684 | INFO     | job summary report
[2025-06-04 12:25:55] 2025-06-04 16:25:36,684 | INFO     | --------------------------------------------------
[2025-06-04 12:25:55] 2025-06-04 16:25:36,684 | INFO     | PanDA job id: 6679517972
[2025-06-04 12:25:55] 2025-06-04 16:25:36,684 | INFO     | task id: 45006595
[2025-06-04 12:25:55] 2025-06-04 16:25:36,684 | INFO     | errors: (none)
[2025-06-04 12:25:55] 2025-06-04 16:25:36,684 | INFO     | status: LOG_TRANSFER = DONE 
[2025-06-04 12:25:55] 2025-06-04 16:25:36,684 | INFO     | pilot state: finished 
[2025-06-04 12:25:55] 2025-06-04 16:25:36,684 | INFO     | transexitcode: 0
[2025-06-04 12:25:55] 2025-06-04 16:25:36,684 | INFO     | exeerrorcode: 0
[2025-06-04 12:25:55] 2025-06-04 16:25:36,684 | INFO     | exeerrordiag: 
[2025-06-04 12:25:55] 2025-06-04 16:25:36,684 | INFO     | exitcode: 0
[2025-06-04 12:25:55] 2025-06-04 16:25:36,685 | INFO     | exitmsg: OK
[2025-06-04 12:25:55] 2025-06-04 16:25:36,685 | INFO     | cpuconsumptiontime: 25531 s
[2025-06-04 12:25:55] 2025-06-04 16:25:36,685 | INFO     | nevents: 400
[2025-06-04 12:25:55] 2025-06-04 16:25:36,685 | INFO     | neventsw: 0
[2025-06-04 12:25:55] 2025-06-04 16:25:36,685 | INFO     | pid: 521774
[2025-06-04 12:25:55] 2025-06-04 16:25:36,685 | INFO     | pgrp: 521774
[2025-06-04 12:25:55] 2025-06-04 16:25:36,685 | INFO     | corecount: 8
[2025-06-04 12:25:55] 2025-06-04 16:25:36,685 | INFO     | event service: False
[2025-06-04 12:25:55] 2025-06-04 16:25:36,685 | INFO     | sizes: {0: 2397292, 3: 2397498, 11: 2397526, 3443: 2423126, 3444: 2432067, 3447: 2432123, 3452: 2432421}
[2025-06-04 12:25:55] 2025-06-04 16:25:36,685 | INFO     | --------------------------------------------------
[2025-06-04 12:25:55] 2025-06-04 16:25:36,685 | INFO     | 
[2025-06-04 12:25:55] 2025-06-04 16:25:36,685 | INFO     | executing command: ls -lF /tmp/boinchome/slots/1
[2025-06-04 12:25:55] 2025-06-04 16:25:36,703 | INFO     | queue jobs had 0 job(s) [purged]
[2025-06-04 12:25:55] 2025-06-04 16:25:36,703 | INFO     | queue payloads had 0 job(s) [purged]
[2025-06-04 12:25:55] 2025-06-04 16:25:36,703 | INFO     | queue data_in had 0 job(s) [purged]
[2025-06-04 12:25:55] 2025-06-04 16:25:36,703 | INFO     | queue data_out had 0 job(s) [purged]
[2025-06-04 12:25:55] 2025-06-04 16:25:36,703 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-06-04 12:25:55] 2025-06-04 16:25:36,703 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-06-04 12:25:55] 2025-06-04 16:25:36,703 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-06-04 12:25:55] 2025-06-04 16:25:36,703 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-06-04 12:25:55] 2025-06-04 16:25:36,704 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-06-04 12:25:55] 2025-06-04 16:25:36,704 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-06-04 12:25:55] 2025-06-04 16:25:36,704 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-06-04 12:25:55] 2025-06-04 16:25:36,704 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-06-04 12:25:55] 2025-06-04 16:25:36,704 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-06-04 12:25:55] 2025-06-04 16:25:36,704 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-06-04 12:25:55] 2025-06-04 16:25:36,704 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-06-04 12:25:55] 2025-06-04 16:25:36,704 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-06-04 12:25:55] 2025-06-04 16:25:36,704 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-06-04 12:25:55] 2025-06-04 16:25:36,704 | INFO     | queue completed_jobids has 1 job(s)
[2025-06-04 12:25:55] 2025-06-04 16:25:36,704 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-06-04 12:25:55] 2025-06-04 16:25:36,704 | INFO     | queue messages had 0 job(s) [purged]
[2025-06-04 12:25:55] 2025-06-04 16:25:36,705 | INFO     | job 6679517972 has completed (purged errors)
[2025-06-04 12:25:55] 2025-06-04 16:25:36,705 | INFO     | overall cleanup function is called
[2025-06-04 12:25:55] 2025-06-04 16:25:37,713 | INFO     | --- collectZombieJob: --- 10, [521774]
[2025-06-04 12:25:55] 2025-06-04 16:25:37,713 | INFO     | zombie collector waiting for pid 521774
[2025-06-04 12:25:55] 2025-06-04 16:25:37,713 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-06-04 12:25:55] 2025-06-04 16:25:37,713 | INFO     | collected zombie processes
[2025-06-04 12:25:55] 2025-06-04 16:25:37,713 | INFO     | will attempt to kill all subprocesses of pid=521774
[2025-06-04 12:25:55] 2025-06-04 16:25:37,879 | INFO     | process IDs to be killed: [521774] (in reverse order)
[2025-06-04 12:25:55] 2025-06-04 16:25:37,935 | WARNING  | found no corresponding commands to process id(s)
[2025-06-04 12:25:55] 2025-06-04 16:25:37,935 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-06-04 12:25:55] 2025-06-04 16:25:37,949 | INFO     | did not find any defunct processes belonging to 521774
[2025-06-04 12:25:55] 2025-06-04 16:25:37,963 | INFO     | did not find any defunct processes belonging to 521774
[2025-06-04 12:25:55] 2025-06-04 16:25:37,963 | INFO     | ready for new job
[2025-06-04 12:25:55] 2025-06-04 16:25:37,964 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-06-04 12:25:55] 2025-06-04 16:25:37,965 | INFO     | **************************************
[2025-06-04 12:25:55] 2025-06-04 16:25:37,965 | INFO     | ***  PanDA Pilot version 3.10.2.2  ***
[2025-06-04 12:25:55] 2025-06-04 16:25:37,965 | INFO     | **************************************
[2025-06-04 12:25:55] 2025-06-04 16:25:37,965 | INFO     | 
[2025-06-04 12:25:55] 2025-06-04 16:25:37,982 | INFO     | architecture information:
[2025-06-04 12:25:55] 2025-06-04 16:25:37,982 | INFO     | executing command: cat /etc/os-release
[2025-06-04 12:25:55] 2025-06-04 16:25:37,994 | INFO     | cat /etc/os-release:
[2025-06-04 12:25:55] NAME="CentOS Linux"
[2025-06-04 12:25:55] VERSION="7 (Core)"
[2025-06-04 12:25:55] ID="centos"
[2025-06-04 12:25:55] ID_LIKE="rhel fedora"
[2025-06-04 12:25:55] VERSION_ID="7"
[2025-06-04 12:25:55] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-06-04 12:25:55] ANSI_COLOR="0;31"
[2025-06-04 12:25:55] CPE_NAME="cpe:/o:centos:centos:7"
[2025-06-04 12:25:55] HOME_URL="https://www.centos.org/"
[2025-06-04 12:25:55] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-06-04 12:25:55] 
[2025-06-04 12:25:55] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-06-04 12:25:55] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-06-04 12:25:55] REDHAT_SUPPORT_PRODUCT="centos"
[2025-06-04 12:25:55] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-06-04 12:25:55] 
[2025-06-04 12:25:55] 2025-06-04 16:25:37,994 | INFO     | **************************************
[2025-06-04 12:25:55] 2025-06-04 16:25:38,497 | INFO     | executing command: df -mP /tmp/boinchome/slots/1
[2025-06-04 12:25:55] 2025-06-04 16:25:38,514 | INFO     | sufficient remaining disk space (96646201344 B)
[2025-06-04 12:25:55] 2025-06-04 16:25:38,514 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-06-04 12:25:55] 2025-06-04 16:25:38,514 | INFO     | current server update state: UPDATING_FINAL
[2025-06-04 12:25:55] 2025-06-04 16:25:38,514 | INFO     | update_server=False
[2025-06-04 12:25:55] 2025-06-04 16:25:38,514 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-06-04 12:25:55] 2025-06-04 16:25:38,515 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-06-04 12:25:55] 2025-06-04 16:25:38,515 | INFO     | aborting loop
[2025-06-04 12:25:55] 2025-06-04 16:25:38,616 | INFO     | all data control threads have been joined
[2025-06-04 12:25:55] 2025-06-04 16:25:38,696 | INFO     | found 0 job(s) in 20 queues
[2025-06-04 12:25:55] 2025-06-04 16:25:38,697 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-06-04 12:25:55] 2025-06-04 16:25:38,697 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-06-04 12:25:55] 2025-06-04 16:25:38,822 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-06-04 12:25:55] 2025-06-04 16:25:38,947 | INFO     | all payload control threads have been joined
[2025-06-04 12:25:55] 2025-06-04 16:25:39,520 | INFO     | [job] retrieve thread has finished
[2025-06-04 12:25:55] 2025-06-04 16:25:39,520 | INFO     | [job] job monitor thread has finished
[2025-06-04 12:25:55] 2025-06-04 16:25:39,523 | INFO     | [payload] validate_post thread has finished
[2025-06-04 12:25:55] 2025-06-04 16:25:39,524 | INFO     | [payload] validate_pre thread has finished
[2025-06-04 12:25:55] 2025-06-04 16:25:39,618 | INFO     | [data] control thread has finished
[2025-06-04 12:25:55] 2025-06-04 16:25:39,723 | INFO     | [payload] failed_post thread has finished
[2025-06-04 12:25:55] 2025-06-04 16:25:39,831 | INFO     | all job control threads have been joined
[2025-06-04 12:25:55] 2025-06-04 16:25:39,953 | INFO     | [payload] control thread has finished
[2025-06-04 12:25:55] 2025-06-04 16:25:40,255 | INFO     | [payload] execute_payloads thread has finished
[2025-06-04 12:25:55] 2025-06-04 16:25:40,707 | INFO     | [job] validate thread has finished
[2025-06-04 12:25:55] 2025-06-04 16:25:40,828 | INFO     | [data] copytool_out thread has finished
[2025-06-04 12:25:55] 2025-06-04 16:25:40,834 | INFO     | [data] copytool_in thread has finished
[2025-06-04 12:25:55] 2025-06-04 16:25:40,836 | INFO     | [job] control thread has finished
[2025-06-04 12:25:55] 2025-06-04 16:25:41,010 | INFO     | [job] create_data_payload thread has finished
[2025-06-04 12:25:55] 2025-06-04 16:25:41,106 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-06-04 12:25:55] 2025-06-04 16:25:41,247 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-06-04 12:25:55] 2025-06-04 16:25:42,253 | INFO     | [job] queue monitor thread has finished
[2025-06-04 12:25:55] 2025-06-04 16:25:45,112 | INFO     | [data] queue_monitor thread has finished
[2025-06-04 12:25:55] 2025-06-04 16:25:48,612 | INFO     | job.realtimelogging is not enabled
[2025-06-04 12:25:55] 2025-06-04 16:25:49,618 | INFO     | [payload] run_realtimelog thread has finished
[2025-06-04 12:25:55] 2025-06-04 16:25:49,881 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140088912766784)>', '<ExcThread(monitor, started 140088193308416)>']
[2025-06-04 12:25:55] 2025-06-04 16:25:50,756 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-06-04 12:25:55] 2025-06-04 16:25:50,756 | INFO     | [monitor] control thread has ended
[2025-06-04 12:25:55] 2025-06-04 16:25:54,907 | INFO     | all workflow threads have been joined
[2025-06-04 12:25:55] 2025-06-04 16:25:54,907 | INFO     | end of generic workflow (traces error code: 0)
[2025-06-04 12:25:55] 2025-06-04 16:25:54,908 | INFO     | traces error code: 0
[2025-06-04 12:25:55] 2025-06-04 16:25:54,908 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-06-04 12:25:55] 2025-06-04 16:25:55,109 [wrapper] ==== pilot stdout END ====
[2025-06-04 12:25:55] 2025-06-04 16:25:55,111 [wrapper] ==== wrapper stdout RESUME ====
[2025-06-04 12:25:55] 2025-06-04 16:25:55,112 [wrapper] pilotpid: 508605
[2025-06-04 12:25:55] 2025-06-04 16:25:55,114 [wrapper] Pilot exit status: 0
[2025-06-04 12:25:55] 2025-06-04 16:25:55,120 [wrapper] pandaids: 6679517972
[2025-06-04 12:25:55] 2025-06-04 16:25:55,159 [wrapper] cleanup supervisor_pilot  679456 508607
[2025-06-04 12:25:55] 2025-06-04 16:25:55,160 [wrapper] Test setup, not cleaning
[2025-06-04 12:25:55] 2025-06-04 16:25:55,162 [wrapper] apfmon messages muted
[2025-06-04 12:25:55] 2025-06-04 16:25:55,164 [wrapper] ==== wrapper stdout END ====
[2025-06-04 12:25:55] 2025-06-04 16:25:55,165 [wrapper] ==== wrapper stderr END ====
[2025-06-04 12:25:55]  *** Error codes and diagnostics ***
[2025-06-04 12:25:55]     "exeErrorCode": 0,
[2025-06-04 12:25:55]     "exeErrorDiag": "",
[2025-06-04 12:25:55]     "pilotErrorCode": 0,
[2025-06-04 12:25:55]     "pilotErrorDiag": "",
[2025-06-04 12:25:55]  *** Listing of results directory ***
[2025-06-04 12:25:55] total 388800
[2025-06-04 12:25:55] -rw-r--r--. 1 boincer umatlas    495897 Jun  4 05:04 pilot3.tar.gz
[2025-06-04 12:25:55] -rw-r--r--. 1 boincer umatlas      5111 Jun  4 05:08 queuedata.json
[2025-06-04 12:25:55] -rwx------. 1 boincer umatlas     37140 Jun  4 05:08 runpilot2-wrapper.sh
[2025-06-04 12:25:55] -rw-r--r--. 1 boincer umatlas       100 Jun  4 11:27 wrapper_26015_x86_64-pc-linux-gnu
[2025-06-04 12:25:55] -rwxr-xr-x. 1 boincer umatlas      7986 Jun  4 11:27 run_atlas
[2025-06-04 12:25:55] -rw-r--r--. 1 boincer umatlas       105 Jun  4 11:27 job.xml
[2025-06-04 12:25:55] -rw-r--r--. 2 boincer umatlas 214477052 Jun  4 11:27 EVNT.45006593._001829.pool.root.1
[2025-06-04 12:25:55] -rw-r--r--. 2 boincer umatlas     15093 Jun  4 11:27 start_atlas.sh
[2025-06-04 12:25:55] drwxrwx--x. 2 boincer umatlas      4096 Jun  4 11:27 shared
[2025-06-04 12:25:55] -rw-r--r--. 2 boincer umatlas    508882 Jun  4 11:27 input.tar.gz
[2025-06-04 12:25:55] -rw-r--r--. 1 boincer umatlas         0 Jun  4 11:27 boinc_lockfile
[2025-06-04 12:25:55] -rw-r--r--. 1 boincer umatlas      2525 Jun  4 11:27 pandaJob.out
[2025-06-04 12:25:55] -rw-------. 1 boincer umatlas    990989 Jun  4 11:27 agis_schedconf.cvmfs.json
[2025-06-04 12:25:55] -rw-------. 1 boincer umatlas   1598969 Jun  4 11:27 agis_ddmendpoints.agis.ALL.json
[2025-06-04 12:25:55] drwx------. 4 boincer umatlas      4096 Jun  4 11:27 pilot3
[2025-06-04 12:25:55] -rw-r--r--. 1 boincer umatlas      6860 Jun  4 12:18 init_data.xml
[2025-06-04 12:25:55] -rw-r--r--. 1 boincer umatlas       529 Jun  4 12:25 boinc_task_state.xml
[2025-06-04 12:25:55] -rw-------. 1 boincer umatlas 178547612 Jun  4 12:25 HITS.45006595._056424.pool.root.1
[2025-06-04 12:25:55] -rw-------. 1 boincer umatlas        95 Jun  4 12:25 pilot_heartbeat.json
[2025-06-04 12:25:55] -rw-------. 1 boincer umatlas      1040 Jun  4 12:25 memory_monitor_summary.json
[2025-06-04 12:25:55] -rw-------. 1 boincer umatlas    283292 Jun  4 12:25 log.45006595._056424.job.log.tgz.1
[2025-06-04 12:25:55] -rw-r--r--. 1 boincer umatlas      8192 Jun  4 12:25 boinc_mmap_file
[2025-06-04 12:25:55] -rw-r--r--. 1 boincer umatlas        27 Jun  4 12:25 wrapper_checkpoint.txt
[2025-06-04 12:25:55] -rw-------. 1 boincer umatlas      7723 Jun  4 12:25 heartbeat.json
[2025-06-04 12:25:55] -rw-------. 1 boincer umatlas      4425 Jun  4 12:25 pilotlog.txt
[2025-06-04 12:25:55] -rw-------. 1 boincer umatlas    352413 Jun  4 12:25 log.45006595._056424.job.log.1
[2025-06-04 12:25:55] -rw-------. 1 boincer umatlas       357 Jun  4 12:25 output.list
[2025-06-04 12:25:55] -rw-r--r--. 1 boincer umatlas       620 Jun  4 12:25 runtime_log
[2025-06-04 12:25:55] -rw-------. 1 boincer umatlas    655360 Jun  4 12:25 result.tar.gz
[2025-06-04 12:25:55] -rw-r--r--. 1 boincer umatlas      8669 Jun  4 12:25 runtime_log.err
[2025-06-04 12:25:55] -rw-------. 1 boincer umatlas       653 Jun  4 12:25 HvfNDm7Hzg7nsSi4ap6QjLDmwznN0nGgGQJmUXzaDmQwnKDmdVU6Xm.diag
[2025-06-04 12:25:55] -rw-r--r--. 1 boincer umatlas     21527 Jun  4 12:25 stderr.txt
[2025-06-04 12:25:55] HITS file was successfully produced:
[2025-06-04 12:25:55] -rw-------. 1 boincer umatlas 178547612 Jun  4 12:25 shared/HITS.pool.root.1
[2025-06-04 12:25:55]  *** Contents of shared directory: ***
[2025-06-04 12:25:55] total 384976
[2025-06-04 12:25:55] -rw-r--r--. 2 boincer umatlas 214477052 Jun  4 11:27 ATLAS.root_0
[2025-06-04 12:25:55] -rw-r--r--. 2 boincer umatlas     15093 Jun  4 11:27 start_atlas.sh
[2025-06-04 12:25:55] -rw-r--r--. 2 boincer umatlas    508882 Jun  4 11:27 input.tar.gz
[2025-06-04 12:25:55] -rw-------. 1 boincer umatlas 178547612 Jun  4 12:25 HITS.pool.root.1
[2025-06-04 12:25:55] -rw-------. 1 boincer umatlas    655360 Jun  4 12:25 result.tar.gz
12:25:56 (502164): run_atlas exited; CPU time 25630.004978
12:25:56 (502164): called boinc_finish(0)

</stderr_txt>
]]>

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