Stderr output

<core_client_version>7.7.0</core_client_version>
<![CDATA[
<stderr_txt>
11:27:20 (13229): wrapper (7.7.26015): starting
11:27:20 (13229): wrapper: running run_atlas (--nthreads 8)
[2025-06-04 11:27:21] Arguments: --nthreads 8
[2025-06-04 11:27:21] Threads: 8
[2025-06-04 11:27:21] Checking for CVMFS
[2025-06-04 11:27:21] Probing /cvmfs/atlas.cern.ch... OK
[2025-06-04 11:27:21] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-06-04 11:27:21] Running cvmfs_config stat atlas.cern.ch
[2025-06-04 11:27:22] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-06-04 11:27:22] 2.11.2.0 5085 28961 298624 146786 1 63 13202671 18432001 9199 130560 0 99979020 99.477 101785573 34890 http://cvmfs-s1fnal.opensciencegrid.org:8000/cvmfs/atlas.cern.ch http://192.41.237.109:6081 1
[2025-06-04 11:27:22] CVMFS is ok
[2025-06-04 11:27:23] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-06-04 11:27:23] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2025-06-04 11:27:23] Further information can be found at the LHC@home message board.
[2025-06-04 11:27:23] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-06-04 11:27:23] Checking for apptainer binary...
[2025-06-04 11:27:23] Using apptainer found in PATH at /usr/bin/apptainer
[2025-06-04 11:27:23] Running /usr/bin/apptainer --version
[2025-06-04 11:27:23] apptainer version 1.3.2-1.el7
[2025-06-04 11:27:23] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-06-04 11:27:23] c-211-39.aglt2.org
[2025-06-04 11:27:23] apptainer works
[2025-06-04 11:27:23] Set ATHENA_PROC_NUMBER=8
[2025-06-04 11:27:23] Set ATHENA_CORE_NUMBER=8
[2025-06-04 11:27:24] Starting ATLAS job with PandaID=6678390336
[2025-06-04 11:27:24] Running command: /usr/bin/apptainer exec -B /cvmfs,/tmp/boinchome/slots/0 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-06-04 12:31:46]  *** The last 200 lines of the pilot log: ***
[2025-06-04 12:31:46]  storage_token=
[2025-06-04 12:31:46]  surl=/tmp/boinchome/slots/0/PanDA_Pilot-6678390336/log.45006595._054787.job.log.tgz.1
[2025-06-04 12:31:46]  turl=davs://dav.ndgf.org:443/atlas/disk/atlasdatadisk/rucio/mc23_13p6TeV/88/db/log.45006595._054787.job.log.tgz.1
[2025-06-04 12:31:46]  workdir=None
[2025-06-04 12:31:46] ]
[2025-06-04 12:31:46] 2025-06-04 16:31:17,302 | INFO     | transferring file log.45006595._054787.job.log.tgz.1 from /tmp/boinchome/slots/0/PanDA_Pilot-6678390336/log.45006595._054787.job.log.tgz.1 to /tmp/boinchome/slots/
[2025-06-04 12:31:46] 2025-06-04 16:31:17,302 | INFO     | executing command: /usr/bin/env mv /tmp/boinchome/slots/0/PanDA_Pilot-6678390336/log.45006595._054787.job.log.tgz.1 /tmp/boinchome/slots/0/log.45006595._054787.job
[2025-06-04 12:31:46] 2025-06-04 16:31:17,319 | INFO     | adding to output.list: log.45006595._054787.job.log.tgz.1 davs://dav.ndgf.org:443/atlas/disk/atlasdatadisk/rucio/mc23_13p6TeV/88/db/log.45006595._054787.job.log.tg
[2025-06-04 12:31:46] 2025-06-04 16:31:17,320 | INFO     | alt stage-out settings: ['pl', 'write_lan', 'w', 'default'], allow_altstageout=False, remain_files=0, has_altstorage=True
[2025-06-04 12:31:46] 2025-06-04 16:31:17,320 | INFO     | summary of transferred files:
[2025-06-04 12:31:46] 2025-06-04 16:31:17,320 | INFO     |  -- lfn=log.45006595._054787.job.log.tgz.1, status_code=0, status=transferred
[2025-06-04 12:31:46] 2025-06-04 16:31:17,320 | INFO     | stage-out finished correctly
[2025-06-04 12:31:46] 2025-06-04 16:31:20,524 | INFO     | finished stage-out for finished payload, adding job to finished_jobs queue
[2025-06-04 12:31:46] 2025-06-04 16:31:22,084 | WARNING  | process 33829 can no longer be monitored (due to stat problems) - aborting
[2025-06-04 12:31:46] 2025-06-04 16:31:22,084 | INFO     | using path: /tmp/boinchome/slots/0/PanDA_Pilot-6678390336/memory_monitor_summary.json (trf name=prmon)
[2025-06-04 12:31:46] 2025-06-04 16:31:22,085 | INFO     | using path: /tmp/boinchome/slots/0/PanDA_Pilot-6678390336/memory_monitor_summary.json (trf name=prmon)
[2025-06-04 12:31:46] 2025-06-04 16:31:22,086 | INFO     | payload log (log.EVNTtoHITS) within allowed size limit (2147483648 B): 3342689 B
[2025-06-04 12:31:46] 2025-06-04 16:31:22,086 | INFO     | payload log (payload.stdout) within allowed size limit (2147483648 B): 15544 B
[2025-06-04 12:31:46] 2025-06-04 16:31:22,086 | INFO     | executing command: df -mP /tmp/boinchome/slots/0
[2025-06-04 12:31:46] 2025-06-04 16:31:22,101 | INFO     | sufficient remaining disk space (76250349568 B)
[2025-06-04 12:31:46] 2025-06-04 16:31:22,101 | INFO     | work directory size check will use 2537553920 B as a max limit (10% grace limit added)
[2025-06-04 12:31:46] 2025-06-04 16:31:22,102 | INFO     | size of work directory /tmp/boinchome/slots/0/PanDA_Pilot-6678390336: 3637866 B (within 2537553920 B limit)
[2025-06-04 12:31:46] 2025-06-04 16:31:22,102 | INFO     | pfn file=/tmp/boinchome/slots/0/PanDA_Pilot-6678390336/HITS.45006595._054787.pool.root.1 does not exist (skip from workdir size calculation)
[2025-06-04 12:31:46] 2025-06-04 16:31:22,102 | INFO     | total size of present files: 0 B (workdir size: 3637866 B)
[2025-06-04 12:31:46] 2025-06-04 16:31:22,102 | INFO     | output file size check: skipping output file /tmp/boinchome/slots/0/PanDA_Pilot-6678390336/HITS.45006595._054787.pool.root.1 since it does not exist
[2025-06-04 12:31:46] 2025-06-04 16:31:22,208 | INFO     | number of running child processes to parent process 33829: 1
[2025-06-04 12:31:46] 2025-06-04 16:31:22,208 | INFO     | maximum number of monitored processes: 6
[2025-06-04 12:31:46] 2025-06-04 16:31:23,571 | INFO     | job 6678390336 has state=finished
[2025-06-04 12:31:46] 2025-06-04 16:31:23,571 | INFO     | preparing for final server update for job 6678390336 in state='finished'
[2025-06-04 12:31:46] 2025-06-04 16:31:23,572 | INFO     | this job has now completed (state=finished)
[2025-06-04 12:31:46] 2025-06-04 16:31:23,572 | INFO     | pilot will not update the server (heartbeat message will be written to file)
[2025-06-04 12:31:46] 2025-06-04 16:31:23,572 | INFO     | log transfer has been attempted: DONE
[2025-06-04 12:31:46] 2025-06-04 16:31:23,572 | INFO     | job 6678390336 has finished - writing final server update
[2025-06-04 12:31:46] 2025-06-04 16:31:23,572 | INFO     | total number of processed events: 400 (read)
[2025-06-04 12:31:46] 2025-06-04 16:31:23,574 | INFO     | executing command: lscpu
[2025-06-04 12:31:46] 2025-06-04 16:31:23,601 | INFO     | executing command: export ATLAS_LOCAL_ROOT_BASE=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase;source ${ATLAS_LOCAL_ROOT_BASE}/user/atlasLocalSetup.sh --quiet;lsetup
[2025-06-04 12:31:46] 2025-06-04 16:31:24,712 | INFO     | monitor loop #292: job 0:6678390336 is in state 'finished'
[2025-06-04 12:31:46] 2025-06-04 16:31:24,712 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-06-04 12:31:46] 2025-06-04 16:31:26,707 | INFO     | CPU arch script returned: x86-64-v3
[2025-06-04 12:31:46] 2025-06-04 16:31:26,707 | INFO     | using path: /tmp/boinchome/slots/0/PanDA_Pilot-6678390336/memory_monitor_summary.json (trf name=prmon)
[2025-06-04 12:31:46] 2025-06-04 16:31:26,707 | INFO     | extracted standard info from prmon json
[2025-06-04 12:31:46] 2025-06-04 16:31:26,708 | INFO     | extracted standard memory fields from prmon json
[2025-06-04 12:31:46] 2025-06-04 16:31:26,708 | WARNING  | GPU info not found in prmon json: 'gpu'
[2025-06-04 12:31:46] 2025-06-04 16:31:26,708 | WARNING  | format EVNTtoHITS has no such key: dbData
[2025-06-04 12:31:46] 2025-06-04 16:31:26,708 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2025-06-04 12:31:46] 2025-06-04 16:31:26,709 | INFO     | fitting pss+swap vs Time
[2025-06-04 12:31:46] 2025-06-04 16:31:26,709 | INFO     | sum of square deviations: 51573670.98181818
[2025-06-04 12:31:46] 2025-06-04 16:31:26,709 | INFO     | sum of deviations: -2203454328.8
[2025-06-04 12:31:46] 2025-06-04 16:31:26,709 | INFO     | mean x: 1749052858.0181818
[2025-06-04 12:31:46] 2025-06-04 16:31:26,709 | INFO     | mean y: 2583639.8
[2025-06-04 12:31:46] 2025-06-04 16:31:26,709 | INFO     | -- intersect: 74729823681.69759
[2025-06-04 12:31:46] 2025-06-04 16:31:26,709 | INFO     | intersect: 74729823681.69759
[2025-06-04 12:31:46] 2025-06-04 16:31:26,709 | INFO     | chi2: 0.017142231945405036
[2025-06-04 12:31:46] 2025-06-04 16:31:26,709 | INFO     | -- intersect: 74729823681.69759
[2025-06-04 12:31:46] 2025-06-04 16:31:26,709 | INFO     | current memory leak: -42.72 B/s (using 55 data points, chi2=0.02)
[2025-06-04 12:31:46] 2025-06-04 16:31:26,710 | INFO     | ..............................
[2025-06-04 12:31:46] 2025-06-04 16:31:26,710 | INFO     | . Timing measurements:
[2025-06-04 12:31:46] 2025-06-04 16:31:26,710 | INFO     | . get job = 0 s
[2025-06-04 12:31:46] 2025-06-04 16:31:26,710 | INFO     | . initial setup = 2 s
[2025-06-04 12:31:46] 2025-06-04 16:31:26,710 | INFO     | . payload setup = 10 s
[2025-06-04 12:31:46] 2025-06-04 16:31:26,710 | INFO     | . stage-in = 0 s
[2025-06-04 12:31:46] 2025-06-04 16:31:26,710 | INFO     | . payload execution = 3777 s
[2025-06-04 12:31:46] 2025-06-04 16:31:26,710 | INFO     | . stage-out = 0 s
[2025-06-04 12:31:46] 2025-06-04 16:31:26,710 | INFO     | . log creation = 0 s
[2025-06-04 12:31:46] 2025-06-04 16:31:26,710 | INFO     | ..............................
[2025-06-04 12:31:46] 2025-06-04 16:31:26,766 | INFO     | 
[2025-06-04 12:31:46] 2025-06-04 16:31:26,766 | INFO     | job summary report
[2025-06-04 12:31:46] 2025-06-04 16:31:26,766 | INFO     | --------------------------------------------------
[2025-06-04 12:31:46] 2025-06-04 16:31:26,766 | INFO     | PanDA job id: 6678390336
[2025-06-04 12:31:46] 2025-06-04 16:31:26,766 | INFO     | task id: 45006595
[2025-06-04 12:31:46] 2025-06-04 16:31:26,767 | INFO     | errors: (none)
[2025-06-04 12:31:46] 2025-06-04 16:31:26,767 | INFO     | status: LOG_TRANSFER = DONE 
[2025-06-04 12:31:46] 2025-06-04 16:31:26,767 | INFO     | pilot state: finished 
[2025-06-04 12:31:46] 2025-06-04 16:31:26,767 | INFO     | transexitcode: 0
[2025-06-04 12:31:46] 2025-06-04 16:31:26,767 | INFO     | exeerrorcode: 0
[2025-06-04 12:31:46] 2025-06-04 16:31:26,767 | INFO     | exeerrordiag: 
[2025-06-04 12:31:46] 2025-06-04 16:31:26,767 | INFO     | exitcode: 0
[2025-06-04 12:31:46] 2025-06-04 16:31:26,767 | INFO     | exitmsg: OK
[2025-06-04 12:31:46] 2025-06-04 16:31:26,767 | INFO     | cpuconsumptiontime: 27066 s
[2025-06-04 12:31:46] 2025-06-04 16:31:26,767 | INFO     | nevents: 400
[2025-06-04 12:31:46] 2025-06-04 16:31:26,767 | INFO     | neventsw: 0
[2025-06-04 12:31:46] 2025-06-04 16:31:26,767 | INFO     | pid: 33829
[2025-06-04 12:31:46] 2025-06-04 16:31:26,767 | INFO     | pgrp: 33829
[2025-06-04 12:31:46] 2025-06-04 16:31:26,767 | INFO     | corecount: 8
[2025-06-04 12:31:46] 2025-06-04 16:31:26,767 | INFO     | event service: False
[2025-06-04 12:31:46] 2025-06-04 16:31:26,767 | INFO     | sizes: {0: 2397171, 1: 2397370, 10: 2397576, 11: 2397604, 3791: 2432401, 3794: 2432401, 3801: 2432727}
[2025-06-04 12:31:46] 2025-06-04 16:31:26,767 | INFO     | --------------------------------------------------
[2025-06-04 12:31:46] 2025-06-04 16:31:26,767 | INFO     | 
[2025-06-04 12:31:46] 2025-06-04 16:31:26,767 | INFO     | executing command: ls -lF /tmp/boinchome/slots/0
[2025-06-04 12:31:46] 2025-06-04 16:31:26,786 | INFO     | queue jobs had 0 job(s) [purged]
[2025-06-04 12:31:46] 2025-06-04 16:31:26,786 | INFO     | queue payloads had 0 job(s) [purged]
[2025-06-04 12:31:46] 2025-06-04 16:31:26,786 | INFO     | queue data_in had 0 job(s) [purged]
[2025-06-04 12:31:46] 2025-06-04 16:31:26,786 | INFO     | queue data_out had 0 job(s) [purged]
[2025-06-04 12:31:46] 2025-06-04 16:31:26,786 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-06-04 12:31:46] 2025-06-04 16:31:26,787 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-06-04 12:31:46] 2025-06-04 16:31:26,787 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-06-04 12:31:46] 2025-06-04 16:31:26,787 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-06-04 12:31:46] 2025-06-04 16:31:26,787 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-06-04 12:31:46] 2025-06-04 16:31:26,787 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-06-04 12:31:46] 2025-06-04 16:31:26,787 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-06-04 12:31:46] 2025-06-04 16:31:26,787 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-06-04 12:31:46] 2025-06-04 16:31:26,787 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-06-04 12:31:46] 2025-06-04 16:31:26,787 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-06-04 12:31:46] 2025-06-04 16:31:26,787 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-06-04 12:31:46] 2025-06-04 16:31:26,787 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-06-04 12:31:46] 2025-06-04 16:31:26,787 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-06-04 12:31:46] 2025-06-04 16:31:26,787 | INFO     | queue completed_jobids has 1 job(s)
[2025-06-04 12:31:46] 2025-06-04 16:31:26,787 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-06-04 12:31:46] 2025-06-04 16:31:26,787 | INFO     | queue messages had 0 job(s) [purged]
[2025-06-04 12:31:46] 2025-06-04 16:31:26,787 | INFO     | job 6678390336 has completed (purged errors)
[2025-06-04 12:31:46] 2025-06-04 16:31:26,787 | INFO     | overall cleanup function is called
[2025-06-04 12:31:46] 2025-06-04 16:31:27,793 | INFO     | --- collectZombieJob: --- 10, [33829]
[2025-06-04 12:31:46] 2025-06-04 16:31:27,794 | INFO     | zombie collector waiting for pid 33829
[2025-06-04 12:31:46] 2025-06-04 16:31:27,794 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-06-04 12:31:46] 2025-06-04 16:31:27,794 | INFO     | collected zombie processes
[2025-06-04 12:31:46] 2025-06-04 16:31:27,794 | INFO     | will attempt to kill all subprocesses of pid=33829
[2025-06-04 12:31:46] 2025-06-04 16:31:27,906 | INFO     | process IDs to be killed: [33829] (in reverse order)
[2025-06-04 12:31:46] 2025-06-04 16:31:27,968 | WARNING  | found no corresponding commands to process id(s)
[2025-06-04 12:31:46] 2025-06-04 16:31:27,968 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-06-04 12:31:46] 2025-06-04 16:31:27,972 | INFO     | did not find any defunct processes belonging to 33829
[2025-06-04 12:31:46] 2025-06-04 16:31:27,975 | INFO     | did not find any defunct processes belonging to 33829
[2025-06-04 12:31:46] 2025-06-04 16:31:27,975 | INFO     | ready for new job
[2025-06-04 12:31:46] 2025-06-04 16:31:27,975 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-06-04 12:31:46] 2025-06-04 16:31:27,976 | INFO     | **************************************
[2025-06-04 12:31:46] 2025-06-04 16:31:27,976 | INFO     | ***  PanDA Pilot version 3.10.2.2  ***
[2025-06-04 12:31:46] 2025-06-04 16:31:27,976 | INFO     | **************************************
[2025-06-04 12:31:46] 2025-06-04 16:31:27,976 | INFO     | 
[2025-06-04 12:31:46] 2025-06-04 16:31:27,979 | INFO     | architecture information:
[2025-06-04 12:31:46] 2025-06-04 16:31:27,979 | INFO     | executing command: cat /etc/os-release
[2025-06-04 12:31:46] 2025-06-04 16:31:27,996 | INFO     | cat /etc/os-release:
[2025-06-04 12:31:46] NAME="CentOS Linux"
[2025-06-04 12:31:46] VERSION="7 (Core)"
[2025-06-04 12:31:46] ID="centos"
[2025-06-04 12:31:46] ID_LIKE="rhel fedora"
[2025-06-04 12:31:46] VERSION_ID="7"
[2025-06-04 12:31:46] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-06-04 12:31:46] ANSI_COLOR="0;31"
[2025-06-04 12:31:46] CPE_NAME="cpe:/o:centos:centos:7"
[2025-06-04 12:31:46] HOME_URL="https://www.centos.org/"
[2025-06-04 12:31:46] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-06-04 12:31:46] 
[2025-06-04 12:31:46] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-06-04 12:31:46] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-06-04 12:31:46] REDHAT_SUPPORT_PRODUCT="centos"
[2025-06-04 12:31:46] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-06-04 12:31:46] 
[2025-06-04 12:31:46] 2025-06-04 16:31:27,996 | INFO     | **************************************
[2025-06-04 12:31:46] 2025-06-04 16:31:28,499 | INFO     | executing command: df -mP /tmp/boinchome/slots/0
[2025-06-04 12:31:46] 2025-06-04 16:31:28,512 | INFO     | sufficient remaining disk space (76254543872 B)
[2025-06-04 12:31:46] 2025-06-04 16:31:28,513 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-06-04 12:31:46] 2025-06-04 16:31:28,513 | INFO     | current server update state: UPDATING_FINAL
[2025-06-04 12:31:46] 2025-06-04 16:31:28,513 | INFO     | update_server=False
[2025-06-04 12:31:46] 2025-06-04 16:31:28,513 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-06-04 12:31:46] 2025-06-04 16:31:28,513 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-06-04 12:31:46] 2025-06-04 16:31:28,513 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-06-04 12:31:46] 2025-06-04 16:31:28,513 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-06-04 12:31:46] 2025-06-04 16:31:28,514 | INFO     | aborting loop
[2025-06-04 12:31:46] 2025-06-04 16:31:28,718 | INFO     | all data control threads have been joined
[2025-06-04 12:31:46] 2025-06-04 16:31:29,125 | INFO     | all payload control threads have been joined
[2025-06-04 12:31:46] 2025-06-04 16:31:29,179 | INFO     | PID=20164 has CPU usage=6.5% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i PR 
[2025-06-04 12:31:46] 2025-06-04 16:31:29,179 | INFO     | .. there are 9 such processes running
[2025-06-04 12:31:46] 2025-06-04 16:31:29,180 | INFO     | found 0 job(s) in 20 queues
[2025-06-04 12:31:46] 2025-06-04 16:31:29,180 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-06-04 12:31:46] 2025-06-04 16:31:29,180 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-06-04 12:31:46] 2025-06-04 16:31:29,513 | INFO     | [job] retrieve thread has finished
[2025-06-04 12:31:46] 2025-06-04 16:31:29,519 | INFO     | [job] queue monitor thread has finished
[2025-06-04 12:31:46] 2025-06-04 16:31:29,519 | INFO     | [job] job monitor thread has finished
[2025-06-04 12:31:46] 2025-06-04 16:31:29,543 | INFO     | [job] validate thread has finished
[2025-06-04 12:31:46] 2025-06-04 16:31:29,714 | INFO     | [payload] execute_payloads thread has finished
[2025-06-04 12:31:46] 2025-06-04 16:31:29,724 | INFO     | [data] control thread has finished
[2025-06-04 12:31:46] 2025-06-04 16:31:29,934 | INFO     | [payload] validate_pre thread has finished
[2025-06-04 12:31:46] 2025-06-04 16:31:29,957 | INFO     | [payload] failed_post thread has finished
[2025-06-04 12:31:46] 2025-06-04 16:31:30,108 | INFO     | all job control threads have been joined
[2025-06-04 12:31:46] 2025-06-04 16:31:30,125 | INFO     | [payload] control thread has finished
[2025-06-04 12:31:46] 2025-06-04 16:31:30,519 | INFO     | [data] copytool_out thread has finished
[2025-06-04 12:31:46] 2025-06-04 16:31:30,591 | INFO     | [payload] validate_post thread has finished
[2025-06-04 12:31:46] 2025-06-04 16:31:30,700 | INFO     | [job] create_data_payload thread has finished
[2025-06-04 12:31:46] 2025-06-04 16:31:30,878 | INFO     | [data] copytool_in thread has finished
[2025-06-04 12:31:46] 2025-06-04 16:31:31,079 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-06-04 12:31:46] 2025-06-04 16:31:31,114 | INFO     | [job] control thread has finished
[2025-06-04 12:31:46] 2025-06-04 16:31:35,085 | INFO     | [data] queue_monitor thread has finished
[2025-06-04 12:31:46] 2025-06-04 16:31:38,775 | INFO     | job.realtimelogging is not enabled
[2025-06-04 12:31:46] 2025-06-04 16:31:39,781 | INFO     | [payload] run_realtimelog thread has finished
[2025-06-04 12:31:46] 2025-06-04 16:31:41,521 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 139675314063168)>', '<ExcThread(monitor, started 139674878207744)>']
[2025-06-04 12:31:46] 2025-06-04 16:31:42,223 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-06-04 12:31:46] 2025-06-04 16:31:42,223 | INFO     | [monitor] control thread has ended
[2025-06-04 12:31:46] 2025-06-04 16:31:46,545 | INFO     | all workflow threads have been joined
[2025-06-04 12:31:46] 2025-06-04 16:31:46,546 | INFO     | end of generic workflow (traces error code: 0)
[2025-06-04 12:31:46] 2025-06-04 16:31:46,546 | INFO     | traces error code: 0
[2025-06-04 12:31:46] 2025-06-04 16:31:46,546 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-06-04 12:31:46] 2025-06-04 16:31:46,624 [wrapper] ==== pilot stdout END ====
[2025-06-04 12:31:46] 2025-06-04 16:31:46,626 [wrapper] ==== wrapper stdout RESUME ====
[2025-06-04 12:31:46] 2025-06-04 16:31:46,628 [wrapper] pilotpid: 20164
[2025-06-04 12:31:46] 2025-06-04 16:31:46,630 [wrapper] Pilot exit status: 0
[2025-06-04 12:31:46] 2025-06-04 16:31:46,637 [wrapper] pandaids: 6678390336
[2025-06-04 12:31:46] 2025-06-04 16:31:46,682 [wrapper] cleanup supervisor_pilot  2761 20166
[2025-06-04 12:31:46] 2025-06-04 16:31:46,685 [wrapper] Test setup, not cleaning
[2025-06-04 12:31:46] 2025-06-04 16:31:46,687 [wrapper] apfmon messages muted
[2025-06-04 12:31:46] 2025-06-04 16:31:46,689 [wrapper] ==== wrapper stdout END ====
[2025-06-04 12:31:46] 2025-06-04 16:31:46,691 [wrapper] ==== wrapper stderr END ====
[2025-06-04 12:31:46]  *** Error codes and diagnostics ***
[2025-06-04 12:31:46]     "exeErrorCode": 0,
[2025-06-04 12:31:46]     "exeErrorDiag": "",
[2025-06-04 12:31:46]     "pilotErrorCode": 0,
[2025-06-04 12:31:46]     "pilotErrorDiag": "",
[2025-06-04 12:31:46]  *** Listing of results directory ***
[2025-06-04 12:31:46] total 397200
[2025-06-04 12:31:46] -rw-r--r-- 1 boincer umatlas    495897 Jun  4 03:04 pilot3.tar.gz
[2025-06-04 12:31:46] -rwx------ 1 boincer umatlas     37140 Jun  4 03:27 runpilot2-wrapper.sh
[2025-06-04 12:31:46] -rw-r--r-- 1 boincer umatlas      5111 Jun  4 03:27 queuedata.json
[2025-06-04 12:31:46] -rw-r--r-- 1 boincer umatlas       100 Jun  4 11:27 wrapper_26015_x86_64-pc-linux-gnu
[2025-06-04 12:31:46] -rwxr-xr-x 1 boincer umatlas      7986 Jun  4 11:27 run_atlas
[2025-06-04 12:31:46] -rw-r--r-- 1 boincer umatlas       105 Jun  4 11:27 job.xml
[2025-06-04 12:31:46] -rw-r--r-- 2 boincer umatlas 218450694 Jun  4 11:27 EVNT.45006593._002192.pool.root.1
[2025-06-04 12:31:46] -rw-r--r-- 2 boincer umatlas     15093 Jun  4 11:27 start_atlas.sh
[2025-06-04 12:31:46] drwxrwx--x 2 boincer umatlas      4096 Jun  4 11:27 shared
[2025-06-04 12:31:46] -rw-r--r-- 2 boincer umatlas    508880 Jun  4 11:27 input.tar.gz
[2025-06-04 12:31:46] -rw-r--r-- 1 boincer umatlas         0 Jun  4 11:27 boinc_lockfile
[2025-06-04 12:31:46] -rw-r--r-- 1 boincer umatlas      2525 Jun  4 11:27 pandaJob.out
[2025-06-04 12:31:46] -rw------- 1 boincer umatlas    990989 Jun  4 11:27 agis_schedconf.cvmfs.json
[2025-06-04 12:31:46] -rw------- 1 boincer umatlas   1598969 Jun  4 11:27 agis_ddmendpoints.agis.ALL.json
[2025-06-04 12:31:46] drwx------ 4 boincer umatlas      4096 Jun  4 11:27 pilot3
[2025-06-04 12:31:46] -rw------- 1 boincer umatlas 183064752 Jun  4 12:30 HITS.45006595._054787.pool.root.1
[2025-06-04 12:31:46] -rw-r--r-- 1 boincer umatlas       529 Jun  4 12:30 boinc_task_state.xml
[2025-06-04 12:31:46] -rw-r--r-- 1 boincer umatlas      6335 Jun  4 12:31 init_data.xml
[2025-06-04 12:31:46] -rw------- 1 boincer umatlas      1064 Jun  4 12:31 memory_monitor_summary.json
[2025-06-04 12:31:46] -rw------- 1 boincer umatlas    299162 Jun  4 12:31 log.45006595._054787.job.log.tgz.1
[2025-06-04 12:31:46] -rw------- 1 boincer umatlas        95 Jun  4 12:31 pilot_heartbeat.json
[2025-06-04 12:31:46] -rw------- 1 boincer umatlas      7741 Jun  4 12:31 heartbeat.json
[2025-06-04 12:31:46] -rw-r--r-- 1 boincer umatlas      8192 Jun  4 12:31 boinc_mmap_file
[2025-06-04 12:31:46] -rw-r--r-- 1 boincer umatlas        27 Jun  4 12:31 wrapper_checkpoint.txt
[2025-06-04 12:31:46] -rw------- 1 boincer umatlas      4817 Jun  4 12:31 pilotlog.txt
[2025-06-04 12:31:46] -rw------- 1 boincer umatlas    390529 Jun  4 12:31 log.45006595._054787.job.log.1
[2025-06-04 12:31:46] -rw------- 1 boincer umatlas       357 Jun  4 12:31 output.list
[2025-06-04 12:31:46] -rw-r--r-- 1 boincer umatlas       620 Jun  4 12:31 runtime_log
[2025-06-04 12:31:46] -rw------- 1 boincer umatlas    706560 Jun  4 12:31 result.tar.gz
[2025-06-04 12:31:46] -rw------- 1 boincer umatlas       659 Jun  4 12:31 yvLMDmKixg7n9Rq4apOajLDm4fhM0noT9bVof3QYDmHuaKDmmMiiEo.diag
[2025-06-04 12:31:46] -rw-r--r-- 1 boincer umatlas      8659 Jun  4 12:31 runtime_log.err
[2025-06-04 12:31:46] -rw-r--r-- 1 boincer umatlas     22415 Jun  4 12:31 stderr.txt
[2025-06-04 12:31:46] HITS file was successfully produced:
[2025-06-04 12:31:46] -rw------- 1 boincer umatlas 183064752 Jun  4 12:30 shared/HITS.pool.root.1
[2025-06-04 12:31:46]  *** Contents of shared directory: ***
[2025-06-04 12:31:46] total 393324
[2025-06-04 12:31:46] -rw-r--r-- 2 boincer umatlas 218450694 Jun  4 11:27 ATLAS.root_0
[2025-06-04 12:31:46] -rw-r--r-- 2 boincer umatlas     15093 Jun  4 11:27 start_atlas.sh
[2025-06-04 12:31:46] -rw-r--r-- 2 boincer umatlas    508880 Jun  4 11:27 input.tar.gz
[2025-06-04 12:31:46] -rw------- 1 boincer umatlas 183064752 Jun  4 12:30 HITS.pool.root.1
[2025-06-04 12:31:46] -rw------- 1 boincer umatlas    706560 Jun  4 12:31 result.tar.gz
12:31:48 (13229): run_atlas exited; CPU time 26851.863419
12:31:48 (13229): called boinc_finish(0)

</stderr_txt>
]]>

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