Stderr output

<core_client_version>8.1.0</core_client_version>
<![CDATA[
<stderr_txt>
11:21:55 (3691007): wrapper (7.7.26015): starting
11:21:55 (3691007): wrapper: running run_atlas (--nthreads 8)
[2025-06-04 11:21:55] Arguments: --nthreads 8
[2025-06-04 11:21:55] Threads: 8
[2025-06-04 11:21:55] Checking for CVMFS
[2025-06-04 11:21:55] Probing /cvmfs/atlas.cern.ch... OK
[2025-06-04 11:21:55] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-06-04 11:21:55] Running cvmfs_config stat atlas.cern.ch
[2025-06-04 11:21:55] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-06-04 11:21:55] 2.12.6.0 54733 37350 531468 146786 3 472 22939219 32935937 31383 16776704 1 498544527 99.712 353799202 21629 http://cvmfs-s1fnal.opensciencegrid.org:8000/cvmfs/atlas.cern.ch http://192.41.231.237:6081 1
[2025-06-04 11:21:55] CVMFS is ok
[2025-06-04 11:21:55] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-06-04 11:21:55] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2025-06-04 11:21:55] Further information can be found at the LHC@home message board.
[2025-06-04 11:21:55] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-06-04 11:21:55] Checking for apptainer binary...
[2025-06-04 11:21:55] Using apptainer found in PATH at /usr/bin/apptainer
[2025-06-04 11:21:55] Running /usr/bin/apptainer --version
[2025-06-04 11:21:55] apptainer version 1.4.1-1.el9
[2025-06-04 11:21:55] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-06-04 11:21:56] c7-2-10.aglt2.org
[2025-06-04 11:21:56] apptainer works
[2025-06-04 11:21:56] Set ATHENA_PROC_NUMBER=8
[2025-06-04 11:21:56] Set ATHENA_CORE_NUMBER=8
[2025-06-04 11:21:56] Starting ATLAS job with PandaID=6679719889
[2025-06-04 11:21:56] Running command: /usr/bin/apptainer exec -B /cvmfs,/tmp/boinchome/slots/1 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-06-04 12:17:11]  *** The last 200 lines of the pilot log: ***
[2025-06-04 12:17:11]  guid=9319c626-cb3a-4977-a3c0-a2af5b2df0f0
[2025-06-04 12:17:11]  inputddms=['NDGF-T1_DATADISK', 'CERN-PROD_DATADISK']
[2025-06-04 12:17:11]  is_altstaged=None
[2025-06-04 12:17:11]  is_tar=False
[2025-06-04 12:17:11]  lfn=log.45006595._056655.job.log.tgz.1
[2025-06-04 12:17:11]  mtime=0
[2025-06-04 12:17:11]  protocol_id=None
[2025-06-04 12:17:11]  protocols=[{'endpoint': 'davs://dav.ndgf.org:443', 'flavour': 'WEBDAV', 'id': 331, 'path': '/atlas/disk/atlasdatadisk/rucio/'}]
[2025-06-04 12:17:11]  replicas=None
[2025-06-04 12:17:11]  scope=mc23_13p6TeV
[2025-06-04 12:17:11]  status=None
[2025-06-04 12:17:11]  status_code=0
[2025-06-04 12:17:11]  storage_token=
[2025-06-04 12:17:11]  surl=/tmp/boinchome/slots/1/PanDA_Pilot-6679719889/log.45006595._056655.job.log.tgz.1
[2025-06-04 12:17:11]  turl=davs://dav.ndgf.org:443/atlas/disk/atlasdatadisk/rucio/mc23_13p6TeV/e4/c5/log.45006595._056655.job.log.tgz.1
[2025-06-04 12:17:11]  workdir=None
[2025-06-04 12:17:11] ]
[2025-06-04 12:17:11] 2025-06-04 16:16:42,405 | INFO     | transferring file log.45006595._056655.job.log.tgz.1 from /tmp/boinchome/slots/1/PanDA_Pilot-6679719889/log.45006595._056655.job.log.tgz.1 to /tmp/boinchome/slots/
[2025-06-04 12:17:11] 2025-06-04 16:16:42,406 | INFO     | executing command: /usr/bin/env mv /tmp/boinchome/slots/1/PanDA_Pilot-6679719889/log.45006595._056655.job.log.tgz.1 /tmp/boinchome/slots/1/log.45006595._056655.job
[2025-06-04 12:17:11] 2025-06-04 16:16:42,422 | INFO     | adding to output.list: log.45006595._056655.job.log.tgz.1 davs://dav.ndgf.org:443/atlas/disk/atlasdatadisk/rucio/mc23_13p6TeV/e4/c5/log.45006595._056655.job.log.tg
[2025-06-04 12:17:11] 2025-06-04 16:16:42,423 | INFO     | alt stage-out settings: ['pl', 'write_lan', 'w', 'default'], allow_altstageout=False, remain_files=0, has_altstorage=True
[2025-06-04 12:17:11] 2025-06-04 16:16:42,423 | INFO     | summary of transferred files:
[2025-06-04 12:17:11] 2025-06-04 16:16:42,423 | INFO     |  -- lfn=log.45006595._056655.job.log.tgz.1, status_code=0, status=transferred
[2025-06-04 12:17:11] 2025-06-04 16:16:42,423 | INFO     | stage-out finished correctly
[2025-06-04 12:17:11] 2025-06-04 16:16:43,087 | INFO     | finished stage-out for finished payload, adding job to finished_jobs queue
[2025-06-04 12:17:11] 2025-06-04 16:16:45,479 | WARNING  | process 3731642 can no longer be monitored (due to stat problems) - aborting
[2025-06-04 12:17:11] 2025-06-04 16:16:45,479 | INFO     | using path: /tmp/boinchome/slots/1/PanDA_Pilot-6679719889/memory_monitor_summary.json (trf name=prmon)
[2025-06-04 12:17:11] 2025-06-04 16:16:45,904 | INFO     | number of running child processes to parent process 3731642: 1
[2025-06-04 12:17:11] 2025-06-04 16:16:45,904 | INFO     | maximum number of monitored processes: 6
[2025-06-04 12:17:11] 2025-06-04 16:16:46,054 | INFO     | job 6679719889 has state=finished
[2025-06-04 12:17:11] 2025-06-04 16:16:46,055 | INFO     | preparing for final server update for job 6679719889 in state='finished'
[2025-06-04 12:17:11] 2025-06-04 16:16:46,056 | INFO     | this job has now completed (state=finished)
[2025-06-04 12:17:11] 2025-06-04 16:16:46,056 | INFO     | pilot will not update the server (heartbeat message will be written to file)
[2025-06-04 12:17:11] 2025-06-04 16:16:46,056 | INFO     | log transfer has been attempted: DONE
[2025-06-04 12:17:11] 2025-06-04 16:16:46,056 | INFO     | job 6679719889 has finished - writing final server update
[2025-06-04 12:17:11] 2025-06-04 16:16:46,056 | INFO     | total number of processed events: 400 (read)
[2025-06-04 12:17:11] 2025-06-04 16:16:46,074 | INFO     | executing command: lscpu
[2025-06-04 12:17:11] 2025-06-04 16:16:46,164 | INFO     | executing command: export ATLAS_LOCAL_ROOT_BASE=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase;source ${ATLAS_LOCAL_ROOT_BASE}/user/atlasLocalSetup.sh --quiet;lsetup
[2025-06-04 12:17:11] 2025-06-04 16:16:48,406 | INFO     | monitor loop #238: job 0:6679719889 is in state 'finished'
[2025-06-04 12:17:11] 2025-06-04 16:16:48,406 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-06-04 12:17:11] 2025-06-04 16:16:50,247 | INFO     | CPU arch script returned: x86-64-v3
[2025-06-04 12:17:11] 2025-06-04 16:16:50,247 | INFO     | using path: /tmp/boinchome/slots/1/PanDA_Pilot-6679719889/memory_monitor_summary.json (trf name=prmon)
[2025-06-04 12:17:11] 2025-06-04 16:16:50,248 | INFO     | extracted standard info from prmon json
[2025-06-04 12:17:11] 2025-06-04 16:16:50,248 | INFO     | extracted standard memory fields from prmon json
[2025-06-04 12:17:11] 2025-06-04 16:16:50,248 | WARNING  | GPU info not found in prmon json: 'gpu'
[2025-06-04 12:17:11] 2025-06-04 16:16:50,248 | WARNING  | format EVNTtoHITS has no such key: dbData
[2025-06-04 12:17:11] 2025-06-04 16:16:50,248 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2025-06-04 12:17:11] 2025-06-04 16:16:50,249 | INFO     | fitting pss+swap vs Time
[2025-06-04 12:17:11] 2025-06-04 16:16:50,249 | INFO     | sum of square deviations: 32179208.0
[2025-06-04 12:17:11] 2025-06-04 16:16:50,250 | INFO     | sum of deviations: -765064684.0
[2025-06-04 12:17:11] 2025-06-04 16:16:50,250 | INFO     | mean x: 1749052259.0
[2025-06-04 12:17:11] 2025-06-04 16:16:50,250 | INFO     | mean y: 2391161.234042553
[2025-06-04 12:17:11] 2025-06-04 16:16:50,250 | INFO     | -- intersect: 41586326782.99705
[2025-06-04 12:17:11] 2025-06-04 16:16:50,250 | INFO     | intersect: 41586326782.99705
[2025-06-04 12:17:11] 2025-06-04 16:16:50,250 | INFO     | chi2: 0.0366621810149584
[2025-06-04 12:17:11] 2025-06-04 16:16:50,250 | INFO     | -- intersect: 41586326782.99705
[2025-06-04 12:17:11] 2025-06-04 16:16:50,250 | INFO     | current memory leak: -23.78 B/s (using 47 data points, chi2=0.04)
[2025-06-04 12:17:11] 2025-06-04 16:16:50,250 | INFO     | ..............................
[2025-06-04 12:17:11] 2025-06-04 16:16:50,250 | INFO     | . Timing measurements:
[2025-06-04 12:17:11] 2025-06-04 16:16:50,250 | INFO     | . get job = 0 s
[2025-06-04 12:17:11] 2025-06-04 16:16:50,250 | INFO     | . initial setup = 2 s
[2025-06-04 12:17:11] 2025-06-04 16:16:50,250 | INFO     | . payload setup = 6 s
[2025-06-04 12:17:11] 2025-06-04 16:16:50,250 | INFO     | . stage-in = 0 s
[2025-06-04 12:17:11] 2025-06-04 16:16:50,250 | INFO     | . payload execution = 3250 s
[2025-06-04 12:17:11] 2025-06-04 16:16:50,250 | INFO     | . stage-out = 0 s
[2025-06-04 12:17:11] 2025-06-04 16:16:50,251 | INFO     | . log creation = 0 s
[2025-06-04 12:17:11] 2025-06-04 16:16:50,251 | INFO     | ..............................
[2025-06-04 12:17:11] 2025-06-04 16:16:50,419 | INFO     | 
[2025-06-04 12:17:11] 2025-06-04 16:16:50,419 | INFO     | job summary report
[2025-06-04 12:17:11] 2025-06-04 16:16:50,420 | INFO     | --------------------------------------------------
[2025-06-04 12:17:11] 2025-06-04 16:16:50,420 | INFO     | PanDA job id: 6679719889
[2025-06-04 12:17:11] 2025-06-04 16:16:50,420 | INFO     | task id: 45006595
[2025-06-04 12:17:11] 2025-06-04 16:16:50,420 | INFO     | errors: (none)
[2025-06-04 12:17:11] 2025-06-04 16:16:50,420 | INFO     | status: LOG_TRANSFER = DONE 
[2025-06-04 12:17:11] 2025-06-04 16:16:50,420 | INFO     | pilot state: finished 
[2025-06-04 12:17:11] 2025-06-04 16:16:50,420 | INFO     | transexitcode: 0
[2025-06-04 12:17:11] 2025-06-04 16:16:50,420 | INFO     | exeerrorcode: 0
[2025-06-04 12:17:11] 2025-06-04 16:16:50,420 | INFO     | exeerrordiag: 
[2025-06-04 12:17:11] 2025-06-04 16:16:50,420 | INFO     | exitcode: 0
[2025-06-04 12:17:11] 2025-06-04 16:16:50,420 | INFO     | exitmsg: OK
[2025-06-04 12:17:11] 2025-06-04 16:16:50,420 | INFO     | cpuconsumptiontime: 24062 s
[2025-06-04 12:17:11] 2025-06-04 16:16:50,420 | INFO     | nevents: 400
[2025-06-04 12:17:11] 2025-06-04 16:16:50,420 | INFO     | neventsw: 0
[2025-06-04 12:17:11] 2025-06-04 16:16:50,420 | INFO     | pid: 3731642
[2025-06-04 12:17:11] 2025-06-04 16:16:50,420 | INFO     | pgrp: 3731642
[2025-06-04 12:17:11] 2025-06-04 16:16:50,420 | INFO     | corecount: 8
[2025-06-04 12:17:11] 2025-06-04 16:16:50,421 | INFO     | event service: False
[2025-06-04 12:17:11] 2025-06-04 16:16:50,421 | INFO     | sizes: {0: 2397291, 5: 2397497, 11: 2397553, 3260: 2422951, 3261: 2431892, 3262: 2431948, 3269: 2432246}
[2025-06-04 12:17:11] 2025-06-04 16:16:50,421 | INFO     | --------------------------------------------------
[2025-06-04 12:17:11] 2025-06-04 16:16:50,421 | INFO     | 
[2025-06-04 12:17:11] 2025-06-04 16:16:50,421 | INFO     | executing command: ls -lF /tmp/boinchome/slots/1
[2025-06-04 12:17:11] 2025-06-04 16:16:50,439 | INFO     | queue jobs had 0 job(s) [purged]
[2025-06-04 12:17:11] 2025-06-04 16:16:50,440 | INFO     | queue payloads had 0 job(s) [purged]
[2025-06-04 12:17:11] 2025-06-04 16:16:50,440 | INFO     | queue data_in had 0 job(s) [purged]
[2025-06-04 12:17:11] 2025-06-04 16:16:50,440 | INFO     | queue data_out had 0 job(s) [purged]
[2025-06-04 12:17:11] 2025-06-04 16:16:50,440 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-06-04 12:17:11] 2025-06-04 16:16:50,440 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-06-04 12:17:11] 2025-06-04 16:16:50,440 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-06-04 12:17:11] 2025-06-04 16:16:50,440 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-06-04 12:17:11] 2025-06-04 16:16:50,440 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-06-04 12:17:11] 2025-06-04 16:16:50,440 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-06-04 12:17:11] 2025-06-04 16:16:50,440 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-06-04 12:17:11] 2025-06-04 16:16:50,441 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-06-04 12:17:11] 2025-06-04 16:16:50,441 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-06-04 12:17:11] 2025-06-04 16:16:50,441 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-06-04 12:17:11] 2025-06-04 16:16:50,441 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-06-04 12:17:11] 2025-06-04 16:16:50,441 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-06-04 12:17:11] 2025-06-04 16:16:50,441 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-06-04 12:17:11] 2025-06-04 16:16:50,441 | INFO     | queue completed_jobids has 1 job(s)
[2025-06-04 12:17:11] 2025-06-04 16:16:50,441 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-06-04 12:17:11] 2025-06-04 16:16:50,441 | INFO     | queue messages had 0 job(s) [purged]
[2025-06-04 12:17:11] 2025-06-04 16:16:50,441 | INFO     | job 6679719889 has completed (purged errors)
[2025-06-04 12:17:11] 2025-06-04 16:16:50,441 | INFO     | overall cleanup function is called
[2025-06-04 12:17:11] 2025-06-04 16:16:51,446 | INFO     | --- collectZombieJob: --- 10, [3731642]
[2025-06-04 12:17:11] 2025-06-04 16:16:51,446 | INFO     | zombie collector waiting for pid 3731642
[2025-06-04 12:17:11] 2025-06-04 16:16:51,447 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-06-04 12:17:11] 2025-06-04 16:16:51,447 | INFO     | collected zombie processes
[2025-06-04 12:17:11] 2025-06-04 16:16:51,447 | INFO     | will attempt to kill all subprocesses of pid=3731642
[2025-06-04 12:17:11] 2025-06-04 16:16:51,919 | INFO     | process IDs to be killed: [3731642] (in reverse order)
[2025-06-04 12:17:11] 2025-06-04 16:16:52,075 | WARNING  | found no corresponding commands to process id(s)
[2025-06-04 12:17:11] 2025-06-04 16:16:52,076 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-06-04 12:17:11] 2025-06-04 16:16:52,097 | INFO     | did not find any defunct processes belonging to 3731642
[2025-06-04 12:17:11] 2025-06-04 16:16:52,124 | INFO     | did not find any defunct processes belonging to 3731642
[2025-06-04 12:17:11] 2025-06-04 16:16:52,125 | INFO     | ready for new job
[2025-06-04 12:17:11] 2025-06-04 16:16:52,126 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-06-04 12:17:11] 2025-06-04 16:16:52,129 | INFO     | **************************************
[2025-06-04 12:17:11] 2025-06-04 16:16:52,129 | INFO     | ***  PanDA Pilot version 3.10.2.2  ***
[2025-06-04 12:17:11] 2025-06-04 16:16:52,129 | INFO     | **************************************
[2025-06-04 12:17:11] 2025-06-04 16:16:52,129 | INFO     | 
[2025-06-04 12:17:11] 2025-06-04 16:16:52,146 | INFO     | architecture information:
[2025-06-04 12:17:11] 2025-06-04 16:16:52,147 | INFO     | executing command: cat /etc/os-release
[2025-06-04 12:17:11] 2025-06-04 16:16:52,166 | INFO     | cat /etc/os-release:
[2025-06-04 12:17:11] NAME="CentOS Linux"
[2025-06-04 12:17:11] VERSION="7 (Core)"
[2025-06-04 12:17:11] ID="centos"
[2025-06-04 12:17:11] ID_LIKE="rhel fedora"
[2025-06-04 12:17:11] VERSION_ID="7"
[2025-06-04 12:17:11] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-06-04 12:17:11] ANSI_COLOR="0;31"
[2025-06-04 12:17:11] CPE_NAME="cpe:/o:centos:centos:7"
[2025-06-04 12:17:11] HOME_URL="https://www.centos.org/"
[2025-06-04 12:17:11] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-06-04 12:17:11] 
[2025-06-04 12:17:11] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-06-04 12:17:11] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-06-04 12:17:11] REDHAT_SUPPORT_PRODUCT="centos"
[2025-06-04 12:17:11] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-06-04 12:17:11] 
[2025-06-04 12:17:11] 2025-06-04 16:16:52,166 | INFO     | **************************************
[2025-06-04 12:17:11] 2025-06-04 16:16:52,669 | INFO     | executing command: df -mP /tmp/boinchome/slots/1
[2025-06-04 12:17:11] 2025-06-04 16:16:52,687 | INFO     | sufficient remaining disk space (76251398144 B)
[2025-06-04 12:17:11] 2025-06-04 16:16:52,687 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-06-04 12:17:11] 2025-06-04 16:16:52,687 | INFO     | current server update state: UPDATING_FINAL
[2025-06-04 12:17:11] 2025-06-04 16:16:52,687 | INFO     | update_server=False
[2025-06-04 12:17:11] 2025-06-04 16:16:52,687 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-06-04 12:17:11] 2025-06-04 16:16:52,687 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-06-04 12:17:11] 2025-06-04 16:16:52,688 | INFO     | aborting loop
[2025-06-04 12:17:11] 2025-06-04 16:16:52,712 | INFO     | all job control threads have been joined
[2025-06-04 12:17:11] 2025-06-04 16:16:53,006 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-06-04 12:17:11] 2025-06-04 16:16:53,339 | INFO     | all data control threads have been joined
[2025-06-04 12:17:11] 2025-06-04 16:16:53,601 | INFO     | found 0 job(s) in 20 queues
[2025-06-04 12:17:11] 2025-06-04 16:16:53,601 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-06-04 12:17:11] 2025-06-04 16:16:53,601 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-06-04 12:17:11] 2025-06-04 16:16:53,655 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-06-04 12:17:11] 2025-06-04 16:16:53,693 | INFO     | [job] retrieve thread has finished
[2025-06-04 12:17:11] 2025-06-04 16:16:53,693 | INFO     | [job] job monitor thread has finished
[2025-06-04 12:17:11] 2025-06-04 16:16:53,717 | INFO     | [job] control thread has finished
[2025-06-04 12:17:11] 2025-06-04 16:16:53,949 | INFO     | [payload] execute_payloads thread has finished
[2025-06-04 12:17:11] 2025-06-04 16:16:54,187 | INFO     | all payload control threads have been joined
[2025-06-04 12:17:11] 2025-06-04 16:16:54,344 | INFO     | [data] control thread has finished
[2025-06-04 12:17:11] 2025-06-04 16:16:54,451 | INFO     | [job] validate thread has finished
[2025-06-04 12:17:11] 2025-06-04 16:16:54,456 | INFO     | [data] copytool_in thread has finished
[2025-06-04 12:17:11] 2025-06-04 16:16:54,586 | INFO     | [job] create_data_payload thread has finished
[2025-06-04 12:17:11] 2025-06-04 16:16:54,653 | INFO     | [payload] validate_pre thread has finished
[2025-06-04 12:17:11] 2025-06-04 16:16:54,828 | INFO     | [payload] validate_post thread has finished
[2025-06-04 12:17:11] 2025-06-04 16:16:54,844 | INFO     | [payload] failed_post thread has finished
[2025-06-04 12:17:11] 2025-06-04 16:16:55,011 | INFO     | [data] copytool_out thread has finished
[2025-06-04 12:17:11] 2025-06-04 16:16:55,192 | INFO     | [payload] control thread has finished
[2025-06-04 12:17:11] 2025-06-04 16:16:55,302 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-06-04 12:17:11] 2025-06-04 16:16:56,307 | INFO     | [job] queue monitor thread has finished
[2025-06-04 12:17:11] 2025-06-04 16:16:57,660 | INFO     | [data] queue_monitor thread has finished
[2025-06-04 12:17:11] 2025-06-04 16:17:03,563 | INFO     | job.realtimelogging is not enabled
[2025-06-04 12:17:11] 2025-06-04 16:17:04,568 | INFO     | [payload] run_realtimelog thread has finished
[2025-06-04 12:17:11] 2025-06-04 16:17:05,698 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140540841871168)>', '<ExcThread(monitor, started 140540339263232)>']
[2025-06-04 12:17:11] 2025-06-04 16:17:06,665 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-06-04 12:17:11] 2025-06-04 16:17:06,665 | INFO     | [monitor] control thread has ended
[2025-06-04 12:17:11] 2025-06-04 16:17:10,723 | INFO     | all workflow threads have been joined
[2025-06-04 12:17:11] 2025-06-04 16:17:10,723 | INFO     | end of generic workflow (traces error code: 0)
[2025-06-04 12:17:11] 2025-06-04 16:17:10,724 | INFO     | traces error code: 0
[2025-06-04 12:17:11] 2025-06-04 16:17:10,724 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-06-04 12:17:11] 2025-06-04 16:17:10,869 [wrapper] ==== pilot stdout END ====
[2025-06-04 12:17:11] 2025-06-04 16:17:10,872 [wrapper] ==== wrapper stdout RESUME ====
[2025-06-04 12:17:11] 2025-06-04 16:17:10,875 [wrapper] pilotpid: 3698947
[2025-06-04 12:17:11] 2025-06-04 16:17:10,877 [wrapper] Pilot exit status: 0
[2025-06-04 12:17:11] 2025-06-04 16:17:10,887 [wrapper] pandaids: 6679719889
[2025-06-04 12:17:11] 2025-06-04 16:17:10,996 [wrapper] cleanup supervisor_pilot  154672 3698948
[2025-06-04 12:17:11] 2025-06-04 16:17:10,998 [wrapper] Test setup, not cleaning
[2025-06-04 12:17:11] 2025-06-04 16:17:11,001 [wrapper] apfmon messages muted
[2025-06-04 12:17:11] 2025-06-04 16:17:11,004 [wrapper] ==== wrapper stdout END ====
[2025-06-04 12:17:11] 2025-06-04 16:17:11,006 [wrapper] ==== wrapper stderr END ====
[2025-06-04 12:17:11]  *** Error codes and diagnostics ***
[2025-06-04 12:17:11]     "exeErrorCode": 0,
[2025-06-04 12:17:11]     "exeErrorDiag": "",
[2025-06-04 12:17:11]     "pilotErrorCode": 0,
[2025-06-04 12:17:11]     "pilotErrorDiag": "",
[2025-06-04 12:17:11]  *** Listing of results directory ***
[2025-06-04 12:17:11] total 391308
[2025-06-04 12:17:11] -rw-r--r--. 1 boincer umatlas      5111 Jun  4 09:10 queuedata.json
[2025-06-04 12:17:11] -rw-r--r--. 1 boincer umatlas    495897 Jun  4 09:10 pilot3.tar.gz
[2025-06-04 12:17:11] -rwx------. 1 boincer umatlas     37140 Jun  4 09:14 runpilot2-wrapper.sh
[2025-06-04 12:17:11] -rw-r--r--. 1 boincer umatlas       100 Jun  4 11:21 wrapper_26015_x86_64-pc-linux-gnu
[2025-06-04 12:17:11] -rwxr-xr-x. 1 boincer umatlas      7986 Jun  4 11:21 run_atlas
[2025-06-04 12:17:11] -rw-r--r--. 1 boincer umatlas       105 Jun  4 11:21 job.xml
[2025-06-04 12:17:11] -rw-r--r--. 2 boincer umatlas 217124254 Jun  4 11:21 EVNT.45006593._002109.pool.root.1
[2025-06-04 12:17:11] -rw-r--r--. 2 boincer umatlas     15093 Jun  4 11:21 start_atlas.sh
[2025-06-04 12:17:11] drwxrwx--x. 2 boincer umatlas      4096 Jun  4 11:21 shared
[2025-06-04 12:17:11] -rw-r--r--. 2 boincer umatlas    508888 Jun  4 11:21 input.tar.gz
[2025-06-04 12:17:11] -rw-r--r--. 1 boincer umatlas         0 Jun  4 11:21 boinc_lockfile
[2025-06-04 12:17:11] -rw-r--r--. 1 boincer umatlas      2524 Jun  4 11:21 pandaJob.out
[2025-06-04 12:17:11] -rw-------. 1 boincer umatlas    990989 Jun  4 11:22 agis_schedconf.cvmfs.json
[2025-06-04 12:17:11] -rw-------. 1 boincer umatlas   1598969 Jun  4 11:22 agis_ddmendpoints.agis.ALL.json
[2025-06-04 12:17:11] drwx------. 4 boincer umatlas      4096 Jun  4 11:22 pilot3
[2025-06-04 12:17:11] -rw-r--r--. 1 boincer umatlas      6932 Jun  4 12:10 init_data.xml
[2025-06-04 12:17:11] -rw-------. 1 boincer umatlas 178473194 Jun  4 12:16 HITS.45006595._056655.pool.root.1
[2025-06-04 12:17:11] -rw-r--r--. 1 boincer umatlas       529 Jun  4 12:16 boinc_task_state.xml
[2025-06-04 12:17:11] -rw-------. 1 boincer umatlas      1035 Jun  4 12:16 memory_monitor_summary.json
[2025-06-04 12:17:11] -rw-------. 1 boincer umatlas    295974 Jun  4 12:16 log.45006595._056655.job.log.tgz.1
[2025-06-04 12:17:11] -rw-------. 1 boincer umatlas        95 Jun  4 12:16 pilot_heartbeat.json
[2025-06-04 12:17:11] -rw-------. 1 boincer umatlas      7688 Jun  4 12:16 heartbeat.json
[2025-06-04 12:17:11] -rw-r--r--. 1 boincer umatlas        27 Jun  4 12:17 wrapper_checkpoint.txt
[2025-06-04 12:17:11] -rw-r--r--. 1 boincer umatlas      8192 Jun  4 12:17 boinc_mmap_file
[2025-06-04 12:17:11] -rw-------. 1 boincer umatlas      4425 Jun  4 12:17 pilotlog.txt
[2025-06-04 12:17:11] -rw-------. 1 boincer umatlas    337940 Jun  4 12:17 log.45006595._056655.job.log.1
[2025-06-04 12:17:11] -rw-------. 1 boincer umatlas       357 Jun  4 12:17 output.list
[2025-06-04 12:17:11] -rw-r--r--. 1 boincer umatlas       620 Jun  4 12:17 runtime_log
[2025-06-04 12:17:11] -rw-------. 1 boincer umatlas    655360 Jun  4 12:17 result.tar.gz
[2025-06-04 12:17:11] -rw-------. 1 boincer umatlas       650 Jun  4 12:17 tJsKDmY72g7nsSi4ap6QjLDmwznN0nGgGQJmUXzaDmCznKDm0GP1Wn.diag
[2025-06-04 12:17:11] -rw-r--r--. 1 boincer umatlas      8654 Jun  4 12:17 runtime_log.err
[2025-06-04 12:17:11] -rw-r--r--. 1 boincer umatlas     21282 Jun  4 12:17 stderr.txt
[2025-06-04 12:17:11] HITS file was successfully produced:
[2025-06-04 12:17:11] -rw-------. 1 boincer umatlas 178473194 Jun  4 12:16 shared/HITS.pool.root.1
[2025-06-04 12:17:11]  *** Contents of shared directory: ***
[2025-06-04 12:17:11] total 387488
[2025-06-04 12:17:11] -rw-r--r--. 2 boincer umatlas 217124254 Jun  4 11:21 ATLAS.root_0
[2025-06-04 12:17:11] -rw-r--r--. 2 boincer umatlas     15093 Jun  4 11:21 start_atlas.sh
[2025-06-04 12:17:11] -rw-r--r--. 2 boincer umatlas    508888 Jun  4 11:21 input.tar.gz
[2025-06-04 12:17:11] -rw-------. 1 boincer umatlas 178473194 Jun  4 12:16 HITS.pool.root.1
[2025-06-04 12:17:11] -rw-------. 1 boincer umatlas    655360 Jun  4 12:17 result.tar.gz
12:17:12 (3691007): run_atlas exited; CPU time 24181.697882
12:17:12 (3691007): called boinc_finish(0)

</stderr_txt>
]]>

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