Stderr output

<core_client_version>8.1.0</core_client_version>
<![CDATA[
<stderr_txt>
11:21:02 (1554971): wrapper (7.7.26015): starting
11:21:02 (1554971): wrapper: running run_atlas (--nthreads 12)
[2025-06-04 11:21:02] Arguments: --nthreads 12
[2025-06-04 11:21:02] Threads: 12
[2025-06-04 11:21:02] Checking for CVMFS
[2025-06-04 11:21:02] Probing /cvmfs/atlas.cern.ch... OK
[2025-06-04 11:21:02] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-06-04 11:21:02] Running cvmfs_config stat atlas.cern.ch
[2025-06-04 11:21:02] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-06-04 11:21:02] 2.12.6.0 504633 23434 407776 146786 3 66 32327734 32935937 9061 16776704 0 100697298 99.633 101065060 32046 http://cvmfs-s1fnal.opensciencegrid.org:8000/cvmfs/atlas.cern.ch http://192.41.231.237:6081 1
[2025-06-04 11:21:02] CVMFS is ok
[2025-06-04 11:21:02] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-06-04 11:21:02] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2025-06-04 11:21:02] Further information can be found at the LHC@home message board.
[2025-06-04 11:21:02] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-06-04 11:21:02] Checking for apptainer binary...
[2025-06-04 11:21:02] Using apptainer found in PATH at /usr/bin/apptainer
[2025-06-04 11:21:02] Running /usr/bin/apptainer --version
[2025-06-04 11:21:02] apptainer version 1.4.1-1.el9
[2025-06-04 11:21:02] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-06-04 11:21:02] c6-5-37-2.aglt2.org
[2025-06-04 11:21:02] apptainer works
[2025-06-04 11:21:02] Set ATHENA_PROC_NUMBER=12
[2025-06-04 11:21:02] Set ATHENA_CORE_NUMBER=12
[2025-06-04 11:21:02] Starting ATLAS job with PandaID=6667033703
[2025-06-04 11:21:02] Running command: /usr/bin/apptainer exec -B /cvmfs,/tmp/boinchome/slots/0 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-06-04 12:20:36]  *** The last 200 lines of the pilot log: ***
[2025-06-04 12:20:36]  replicas=None
[2025-06-04 12:20:36]  scope=mc23_13p6TeV
[2025-06-04 12:20:36]  status=None
[2025-06-04 12:20:36]  status_code=0
[2025-06-04 12:20:36]  storage_token=
[2025-06-04 12:20:36]  surl=/tmp/boinchome/slots/0/PanDA_Pilot-6667033703/log.44871837._067892.job.log.tgz.1
[2025-06-04 12:20:36]  turl=davs://dav.ndgf.org:443/atlas/disk/atlasdatadisk/rucio/mc23_13p6TeV/20/a7/log.44871837._067892.job.log.tgz.1
[2025-06-04 12:20:36]  workdir=None
[2025-06-04 12:20:36] ]
[2025-06-04 12:20:36] 2025-06-04 16:20:08,672 | INFO     | transferring file log.44871837._067892.job.log.tgz.1 from /tmp/boinchome/slots/0/PanDA_Pilot-6667033703/log.44871837._067892.job.log.tgz.1 to /tmp/boinchome/slots/
[2025-06-04 12:20:36] 2025-06-04 16:20:08,672 | INFO     | executing command: /usr/bin/env mv /tmp/boinchome/slots/0/PanDA_Pilot-6667033703/log.44871837._067892.job.log.tgz.1 /tmp/boinchome/slots/0/log.44871837._067892.job
[2025-06-04 12:20:36] 2025-06-04 16:20:08,687 | INFO     | adding to output.list: log.44871837._067892.job.log.tgz.1 davs://dav.ndgf.org:443/atlas/disk/atlasdatadisk/rucio/mc23_13p6TeV/20/a7/log.44871837._067892.job.log.tg
[2025-06-04 12:20:36] 2025-06-04 16:20:08,688 | INFO     | alt stage-out settings: ['pl', 'write_lan', 'w', 'default'], allow_altstageout=False, remain_files=0, has_altstorage=True
[2025-06-04 12:20:36] 2025-06-04 16:20:08,688 | INFO     | summary of transferred files:
[2025-06-04 12:20:36] 2025-06-04 16:20:08,688 | INFO     |  -- lfn=log.44871837._067892.job.log.tgz.1, status_code=0, status=transferred
[2025-06-04 12:20:36] 2025-06-04 16:20:08,688 | INFO     | stage-out finished correctly
[2025-06-04 12:20:36] 2025-06-04 16:20:08,987 | WARNING  | process 1565265 can no longer be monitored (due to stat problems) - aborting
[2025-06-04 12:20:36] 2025-06-04 16:20:08,988 | INFO     | using path: /tmp/boinchome/slots/0/PanDA_Pilot-6667033703/memory_monitor_summary.json (trf name=prmon)
[2025-06-04 12:20:36] 2025-06-04 16:20:09,202 | INFO     | number of running child processes to parent process 1565265: 1
[2025-06-04 12:20:36] 2025-06-04 16:20:09,203 | INFO     | maximum number of monitored processes: 6
[2025-06-04 12:20:36] 2025-06-04 16:20:11,706 | INFO     | monitor loop #266: job 0:6667033703 is in state 'finished'
[2025-06-04 12:20:36] 2025-06-04 16:20:11,706 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-06-04 12:20:36] 2025-06-04 16:20:11,829 | INFO     | finished stage-out for finished payload, adding job to finished_jobs queue
[2025-06-04 12:20:36] 2025-06-04 16:20:13,198 | INFO     | 3544s have passed since pilot start - server update state is 'RUNNING'
[2025-06-04 12:20:36] 2025-06-04 16:20:13,440 | INFO     | job 6667033703 has state=finished
[2025-06-04 12:20:36] 2025-06-04 16:20:13,441 | INFO     | preparing for final server update for job 6667033703 in state='finished'
[2025-06-04 12:20:36] 2025-06-04 16:20:13,441 | INFO     | this job has now completed (state=finished)
[2025-06-04 12:20:36] 2025-06-04 16:20:13,441 | INFO     | pilot will not update the server (heartbeat message will be written to file)
[2025-06-04 12:20:36] 2025-06-04 16:20:13,441 | INFO     | log transfer has been attempted: DONE
[2025-06-04 12:20:36] 2025-06-04 16:20:13,441 | INFO     | job 6667033703 has finished - writing final server update
[2025-06-04 12:20:36] 2025-06-04 16:20:13,442 | INFO     | total number of processed events: 400 (read)
[2025-06-04 12:20:36] 2025-06-04 16:20:13,456 | INFO     | executing command: lscpu
[2025-06-04 12:20:36] 2025-06-04 16:20:13,529 | INFO     | executing command: export ATLAS_LOCAL_ROOT_BASE=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase;source ${ATLAS_LOCAL_ROOT_BASE}/user/atlasLocalSetup.sh --quiet;lsetup
[2025-06-04 12:20:36] 2025-06-04 16:20:14,209 | INFO     | monitor loop #267: job 0:6667033703 is in state 'finished'
[2025-06-04 12:20:36] 2025-06-04 16:20:14,209 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-06-04 12:20:36] 2025-06-04 16:20:16,712 | INFO     | monitor loop #268: job 0:6667033703 is in state 'finished'
[2025-06-04 12:20:36] 2025-06-04 16:20:16,713 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-06-04 12:20:36] 2025-06-04 16:20:16,931 | INFO     | CPU arch script returned: x86-64-v4
[2025-06-04 12:20:36] 2025-06-04 16:20:16,931 | INFO     | using path: /tmp/boinchome/slots/0/PanDA_Pilot-6667033703/memory_monitor_summary.json (trf name=prmon)
[2025-06-04 12:20:36] 2025-06-04 16:20:16,932 | INFO     | extracted standard info from prmon json
[2025-06-04 12:20:36] 2025-06-04 16:20:16,932 | INFO     | extracted standard memory fields from prmon json
[2025-06-04 12:20:36] 2025-06-04 16:20:16,932 | WARNING  | GPU info not found in prmon json: 'gpu'
[2025-06-04 12:20:36] 2025-06-04 16:20:16,933 | WARNING  | format EVNTtoHITS has no such key: dbData
[2025-06-04 12:20:36] 2025-06-04 16:20:16,933 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2025-06-04 12:20:36] 2025-06-04 16:20:16,934 | INFO     | fitting pss+swap vs Time
[2025-06-04 12:20:36] 2025-06-04 16:20:16,935 | INFO     | sum of square deviations: 41117050.0
[2025-06-04 12:20:36] 2025-06-04 16:20:16,935 | INFO     | sum of deviations: -2467226252.0
[2025-06-04 12:20:36] 2025-06-04 16:20:16,935 | INFO     | mean x: 1749052324.0
[2025-06-04 12:20:36] 2025-06-04 16:20:16,935 | INFO     | mean y: 2784206.4509803923
[2025-06-04 12:20:36] 2025-06-04 16:20:16,935 | INFO     | -- intersect: 104954569655.41702
[2025-06-04 12:20:36] 2025-06-04 16:20:16,935 | INFO     | intersect: 104954569655.41702
[2025-06-04 12:20:36] 2025-06-04 16:20:16,935 | INFO     | chi2: 0.08780978840508381
[2025-06-04 12:20:36] 2025-06-04 16:20:16,935 | INFO     | -- intersect: 104954569655.41702
[2025-06-04 12:20:36] 2025-06-04 16:20:16,935 | INFO     | current memory leak: -60.00 B/s (using 51 data points, chi2=0.09)
[2025-06-04 12:20:36] 2025-06-04 16:20:16,936 | INFO     | ..............................
[2025-06-04 12:20:36] 2025-06-04 16:20:16,936 | INFO     | . Timing measurements:
[2025-06-04 12:20:36] 2025-06-04 16:20:16,936 | INFO     | . get job = 0 s
[2025-06-04 12:20:36] 2025-06-04 16:20:16,936 | INFO     | . initial setup = 2 s
[2025-06-04 12:20:36] 2025-06-04 16:20:16,936 | INFO     | . payload setup = 5 s
[2025-06-04 12:20:36] 2025-06-04 16:20:16,936 | INFO     | . stage-in = 0 s
[2025-06-04 12:20:36] 2025-06-04 16:20:16,936 | INFO     | . payload execution = 3514 s
[2025-06-04 12:20:36] 2025-06-04 16:20:16,937 | INFO     | . stage-out = 0 s
[2025-06-04 12:20:36] 2025-06-04 16:20:16,937 | INFO     | . log creation = 0 s
[2025-06-04 12:20:36] 2025-06-04 16:20:16,937 | INFO     | ..............................
[2025-06-04 12:20:36] 2025-06-04 16:20:17,021 | INFO     | 
[2025-06-04 12:20:36] 2025-06-04 16:20:17,021 | INFO     | job summary report
[2025-06-04 12:20:36] 2025-06-04 16:20:17,022 | INFO     | --------------------------------------------------
[2025-06-04 12:20:36] 2025-06-04 16:20:17,022 | INFO     | PanDA job id: 6667033703
[2025-06-04 12:20:36] 2025-06-04 16:20:17,022 | INFO     | task id: 44871837
[2025-06-04 12:20:36] 2025-06-04 16:20:17,022 | INFO     | errors: (none)
[2025-06-04 12:20:36] 2025-06-04 16:20:17,022 | INFO     | status: LOG_TRANSFER = DONE 
[2025-06-04 12:20:36] 2025-06-04 16:20:17,022 | INFO     | pilot state: finished 
[2025-06-04 12:20:36] 2025-06-04 16:20:17,022 | INFO     | transexitcode: 0
[2025-06-04 12:20:36] 2025-06-04 16:20:17,022 | INFO     | exeerrorcode: 0
[2025-06-04 12:20:36] 2025-06-04 16:20:17,022 | INFO     | exeerrordiag: 
[2025-06-04 12:20:36] 2025-06-04 16:20:17,022 | INFO     | exitcode: 0
[2025-06-04 12:20:36] 2025-06-04 16:20:17,022 | INFO     | exitmsg: OK
[2025-06-04 12:20:36] 2025-06-04 16:20:17,022 | INFO     | cpuconsumptiontime: 38180 s
[2025-06-04 12:20:36] 2025-06-04 16:20:17,022 | INFO     | nevents: 400
[2025-06-04 12:20:36] 2025-06-04 16:20:17,022 | INFO     | neventsw: 0
[2025-06-04 12:20:36] 2025-06-04 16:20:17,022 | INFO     | pid: 1565265
[2025-06-04 12:20:36] 2025-06-04 16:20:17,022 | INFO     | pgrp: 1565265
[2025-06-04 12:20:36] 2025-06-04 16:20:17,022 | INFO     | corecount: 12
[2025-06-04 12:20:36] 2025-06-04 16:20:17,022 | INFO     | event service: False
[2025-06-04 12:20:36] 2025-06-04 16:20:17,022 | INFO     | sizes: {0: 2397392, 3: 2397598, 11: 2397626, 3523: 2423255, 3524: 2432196, 3527: 2432252, 3532: 2432550}
[2025-06-04 12:20:36] 2025-06-04 16:20:17,022 | INFO     | --------------------------------------------------
[2025-06-04 12:20:36] 2025-06-04 16:20:17,022 | INFO     | 
[2025-06-04 12:20:36] 2025-06-04 16:20:17,022 | INFO     | executing command: ls -lF /tmp/boinchome/slots/0
[2025-06-04 12:20:36] 2025-06-04 16:20:17,035 | INFO     | queue jobs had 0 job(s) [purged]
[2025-06-04 12:20:36] 2025-06-04 16:20:17,035 | INFO     | queue payloads had 0 job(s) [purged]
[2025-06-04 12:20:36] 2025-06-04 16:20:17,035 | INFO     | queue data_in had 0 job(s) [purged]
[2025-06-04 12:20:36] 2025-06-04 16:20:17,035 | INFO     | queue data_out had 0 job(s) [purged]
[2025-06-04 12:20:36] 2025-06-04 16:20:17,035 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-06-04 12:20:36] 2025-06-04 16:20:17,035 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-06-04 12:20:36] 2025-06-04 16:20:17,036 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-06-04 12:20:36] 2025-06-04 16:20:17,036 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-06-04 12:20:36] 2025-06-04 16:20:17,036 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-06-04 12:20:36] 2025-06-04 16:20:17,036 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-06-04 12:20:36] 2025-06-04 16:20:17,036 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-06-04 12:20:36] 2025-06-04 16:20:17,036 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-06-04 12:20:36] 2025-06-04 16:20:17,036 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-06-04 12:20:36] 2025-06-04 16:20:17,036 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-06-04 12:20:36] 2025-06-04 16:20:17,036 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-06-04 12:20:36] 2025-06-04 16:20:17,036 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-06-04 12:20:36] 2025-06-04 16:20:17,036 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-06-04 12:20:36] 2025-06-04 16:20:17,036 | INFO     | queue completed_jobids has 1 job(s)
[2025-06-04 12:20:36] 2025-06-04 16:20:17,036 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-06-04 12:20:36] 2025-06-04 16:20:17,036 | INFO     | queue messages had 0 job(s) [purged]
[2025-06-04 12:20:36] 2025-06-04 16:20:17,037 | INFO     | job 6667033703 has completed (purged errors)
[2025-06-04 12:20:36] 2025-06-04 16:20:17,037 | INFO     | overall cleanup function is called
[2025-06-04 12:20:36] 2025-06-04 16:20:18,045 | INFO     | --- collectZombieJob: --- 10, [1565265]
[2025-06-04 12:20:36] 2025-06-04 16:20:18,045 | INFO     | zombie collector waiting for pid 1565265
[2025-06-04 12:20:36] 2025-06-04 16:20:18,045 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-06-04 12:20:36] 2025-06-04 16:20:18,046 | INFO     | collected zombie processes
[2025-06-04 12:20:36] 2025-06-04 16:20:18,046 | INFO     | will attempt to kill all subprocesses of pid=1565265
[2025-06-04 12:20:36] 2025-06-04 16:20:18,222 | INFO     | process IDs to be killed: [1565265] (in reverse order)
[2025-06-04 12:20:36] 2025-06-04 16:20:18,278 | WARNING  | found no corresponding commands to process id(s)
[2025-06-04 12:20:36] 2025-06-04 16:20:18,279 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-06-04 12:20:36] 2025-06-04 16:20:18,288 | INFO     | did not find any defunct processes belonging to 1565265
[2025-06-04 12:20:36] 2025-06-04 16:20:18,297 | INFO     | did not find any defunct processes belonging to 1565265
[2025-06-04 12:20:36] 2025-06-04 16:20:18,297 | INFO     | ready for new job
[2025-06-04 12:20:36] 2025-06-04 16:20:18,297 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-06-04 12:20:36] 2025-06-04 16:20:18,298 | INFO     | **************************************
[2025-06-04 12:20:36] 2025-06-04 16:20:18,299 | INFO     | ***  PanDA Pilot version 3.10.2.2  ***
[2025-06-04 12:20:36] 2025-06-04 16:20:18,299 | INFO     | **************************************
[2025-06-04 12:20:36] 2025-06-04 16:20:18,299 | INFO     | 
[2025-06-04 12:20:36] 2025-06-04 16:20:18,313 | INFO     | architecture information:
[2025-06-04 12:20:36] 2025-06-04 16:20:18,313 | INFO     | executing command: cat /etc/os-release
[2025-06-04 12:20:36] 2025-06-04 16:20:18,325 | INFO     | cat /etc/os-release:
[2025-06-04 12:20:36] NAME="CentOS Linux"
[2025-06-04 12:20:36] VERSION="7 (Core)"
[2025-06-04 12:20:36] ID="centos"
[2025-06-04 12:20:36] ID_LIKE="rhel fedora"
[2025-06-04 12:20:36] VERSION_ID="7"
[2025-06-04 12:20:36] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-06-04 12:20:36] ANSI_COLOR="0;31"
[2025-06-04 12:20:36] CPE_NAME="cpe:/o:centos:centos:7"
[2025-06-04 12:20:36] HOME_URL="https://www.centos.org/"
[2025-06-04 12:20:36] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-06-04 12:20:36] 
[2025-06-04 12:20:36] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-06-04 12:20:36] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-06-04 12:20:36] REDHAT_SUPPORT_PRODUCT="centos"
[2025-06-04 12:20:36] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-06-04 12:20:36] 
[2025-06-04 12:20:36] 2025-06-04 16:20:18,325 | INFO     | **************************************
[2025-06-04 12:20:36] 2025-06-04 16:20:18,826 | INFO     | executing command: df -mP /tmp/boinchome/slots/0
[2025-06-04 12:20:36] 2025-06-04 16:20:18,841 | INFO     | sufficient remaining disk space (76228329472 B)
[2025-06-04 12:20:36] 2025-06-04 16:20:18,841 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-06-04 12:20:36] 2025-06-04 16:20:18,842 | INFO     | current server update state: UPDATING_FINAL
[2025-06-04 12:20:36] 2025-06-04 16:20:18,842 | INFO     | update_server=False
[2025-06-04 12:20:36] 2025-06-04 16:20:18,842 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-06-04 12:20:36] 2025-06-04 16:20:18,842 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-06-04 12:20:36] 2025-06-04 16:20:18,842 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-06-04 12:20:36] 2025-06-04 16:20:18,842 | WARNING  | aborting monitor loop since graceful_stop has been set (timing out remaining threads)
[2025-06-04 12:20:36] 2025-06-04 16:20:18,843 | INFO     | found 0 job(s) in 20 queues
[2025-06-04 12:20:36] 2025-06-04 16:20:18,843 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-06-04 12:20:36] 2025-06-04 16:20:18,843 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-06-04 12:20:36] 2025-06-04 16:20:18,886 | INFO     | all job control threads have been joined
[2025-06-04 12:20:36] 2025-06-04 16:20:19,216 | WARNING  | job monitor detected an abort_job request (signal=args.signal)
[2025-06-04 12:20:36] 2025-06-04 16:20:19,216 | WARNING  | cannot recover job monitoring - aborting pilot
[2025-06-04 12:20:36] 2025-06-04 16:20:19,216 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-06-04 12:20:36] 2025-06-04 16:20:19,216 | INFO     | will abort loop
[2025-06-04 12:20:36] 2025-06-04 16:20:19,290 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-06-04 12:20:36] 2025-06-04 16:20:19,708 | INFO     | all data control threads have been joined
[2025-06-04 12:20:36] 2025-06-04 16:20:19,747 | INFO     | all payload control threads have been joined
[2025-06-04 12:20:36] 2025-06-04 16:20:19,847 | INFO     | [job] retrieve thread has finished
[2025-06-04 12:20:36] 2025-06-04 16:20:19,847 | INFO     | [job] queue monitor thread has finished
[2025-06-04 12:20:36] 2025-06-04 16:20:19,861 | INFO     | [payload] failed_post thread has finished
[2025-06-04 12:20:36] 2025-06-04 16:20:19,892 | INFO     | [job] control thread has finished
[2025-06-04 12:20:36] 2025-06-04 16:20:20,222 | INFO     | [job] job monitor thread has finished
[2025-06-04 12:20:36] 2025-06-04 16:20:20,385 | INFO     | [job] validate thread has finished
[2025-06-04 12:20:36] 2025-06-04 16:20:20,400 | INFO     | [payload] validate_post thread has finished
[2025-06-04 12:20:36] 2025-06-04 16:20:20,587 | INFO     | [job] create_data_payload thread has finished
[2025-06-04 12:20:36] 2025-06-04 16:20:20,710 | INFO     | [data] control thread has finished
[2025-06-04 12:20:36] 2025-06-04 16:20:20,751 | INFO     | [payload] control thread has finished
[2025-06-04 12:20:36] 2025-06-04 16:20:20,808 | INFO     | [data] copytool_in thread has finished
[2025-06-04 12:20:36] 2025-06-04 16:20:20,919 | INFO     | [payload] execute_payloads thread has finished
[2025-06-04 12:20:36] 2025-06-04 16:20:21,002 | INFO     | [payload] validate_pre thread has finished
[2025-06-04 12:20:36] 2025-06-04 16:20:21,296 | INFO     | [data] copytool_out thread has finished
[2025-06-04 12:20:36] 2025-06-04 16:20:22,847 | INFO     | [data] queue_monitor thread has finished
[2025-06-04 12:20:36] 2025-06-04 16:20:29,178 | INFO     | job.realtimelogging is not enabled
[2025-06-04 12:20:36] 2025-06-04 16:20:30,183 | INFO     | [payload] run_realtimelog thread has finished
[2025-06-04 12:20:36] 2025-06-04 16:20:31,362 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 139858764617536)>', '<ExcThread(monitor, started 139858253162240)>']
[2025-06-04 12:20:36] 2025-06-04 16:20:31,909 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-06-04 12:20:36] 2025-06-04 16:20:31,909 | INFO     | [monitor] control thread has ended
[2025-06-04 12:20:36] 2025-06-04 16:20:36,368 | INFO     | all workflow threads have been joined
[2025-06-04 12:20:36] 2025-06-04 16:20:36,369 | INFO     | end of generic workflow (traces error code: 0)
[2025-06-04 12:20:36] 2025-06-04 16:20:36,369 | INFO     | traces error code: 0
[2025-06-04 12:20:36] 2025-06-04 16:20:36,369 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-06-04 12:20:36] 2025-06-04 16:20:36,504 [wrapper] ==== pilot stdout END ====
[2025-06-04 12:20:36] 2025-06-04 16:20:36,507 [wrapper] ==== wrapper stdout RESUME ====
[2025-06-04 12:20:36] 2025-06-04 16:20:36,509 [wrapper] pilotpid: 1558612
[2025-06-04 12:20:36] 2025-06-04 16:20:36,510 [wrapper] Pilot exit status: 0
[2025-06-04 12:20:36] 2025-06-04 16:20:36,518 [wrapper] pandaids: 6667033703
[2025-06-04 12:20:36] 2025-06-04 16:20:36,568 [wrapper] cleanup supervisor_pilot 1663707 1558613
[2025-06-04 12:20:36] 2025-06-04 16:20:36,571 [wrapper] Test setup, not cleaning
[2025-06-04 12:20:36] 2025-06-04 16:20:36,574 [wrapper] apfmon messages muted
[2025-06-04 12:20:36] 2025-06-04 16:20:36,577 [wrapper] ==== wrapper stdout END ====
[2025-06-04 12:20:36] 2025-06-04 16:20:36,580 [wrapper] ==== wrapper stderr END ====
[2025-06-04 12:20:36]  *** Error codes and diagnostics ***
[2025-06-04 12:20:36]     "exeErrorCode": 0,
[2025-06-04 12:20:36]     "exeErrorDiag": "",
[2025-06-04 12:20:36]     "pilotErrorCode": 0,
[2025-06-04 12:20:36]     "pilotErrorDiag": "",
[2025-06-04 12:20:36]  *** Listing of results directory ***
[2025-06-04 12:20:36] total 418276
[2025-06-04 12:20:36] -rw-r--r--. 1 boincer umatlas    495897 May 27 08:18 pilot3.tar.gz
[2025-06-04 12:20:36] -rwx------. 1 boincer umatlas     37140 May 27 09:18 runpilot2-wrapper.sh
[2025-06-04 12:20:36] -rw-r--r--. 1 boincer umatlas      5111 May 27 09:18 queuedata.json
[2025-06-04 12:20:36] -rw-r--r--. 1 boincer umatlas       100 Jun  4 11:21 wrapper_26015_x86_64-pc-linux-gnu
[2025-06-04 12:20:36] -rwxr-xr-x. 1 boincer umatlas      7986 Jun  4 11:21 run_atlas
[2025-06-04 12:20:36] -rw-r--r--. 1 boincer umatlas       105 Jun  4 11:21 job.xml
[2025-06-04 12:20:36] -rw-r--r--. 2 boincer umatlas 226497498 Jun  4 11:21 EVNT.44871834._002671.pool.root.1
[2025-06-04 12:20:36] -rw-r--r--. 2 boincer umatlas     15093 Jun  4 11:21 start_atlas.sh
[2025-06-04 12:20:36] drwxrwx--x. 2 boincer umatlas      4096 Jun  4 11:21 shared
[2025-06-04 12:20:36] -rw-r--r--. 2 boincer umatlas    508879 Jun  4 11:21 input.tar.gz
[2025-06-04 12:20:36] -rw-r--r--. 1 boincer umatlas         0 Jun  4 11:21 boinc_lockfile
[2025-06-04 12:20:36] -rw-r--r--. 1 boincer umatlas      2559 Jun  4 11:21 pandaJob.out
[2025-06-04 12:20:36] -rw-------. 1 boincer umatlas    990989 Jun  4 11:21 agis_schedconf.cvmfs.json
[2025-06-04 12:20:36] -rw-------. 1 boincer umatlas   1598969 Jun  4 11:21 agis_ddmendpoints.agis.ALL.json
[2025-06-04 12:20:36] drwx------. 4 boincer umatlas      4096 Jun  4 11:21 pilot3
[2025-06-04 12:20:36] -rw-------. 1 boincer umatlas 196545129 Jun  4 12:19 HITS.44871837._067892.pool.root.1
[2025-06-04 12:20:36] -rw-r--r--. 1 boincer umatlas       529 Jun  4 12:19 boinc_task_state.xml
[2025-06-04 12:20:36] -rw-------. 1 boincer umatlas      1026 Jun  4 12:20 memory_monitor_summary.json
[2025-06-04 12:20:36] -rw-------. 1 boincer umatlas    359932 Jun  4 12:20 log.44871837._067892.job.log.tgz.1
[2025-06-04 12:20:36] -rw-------. 1 boincer umatlas        95 Jun  4 12:20 pilot_heartbeat.json
[2025-06-04 12:20:36] -rw-------. 1 boincer umatlas      7705 Jun  4 12:20 heartbeat.json
[2025-06-04 12:20:36] -rw-r--r--. 1 boincer umatlas      6842 Jun  4 12:20 init_data.xml
[2025-06-04 12:20:36] -rw-r--r--. 1 boincer umatlas      8192 Jun  4 12:20 boinc_mmap_file
[2025-06-04 12:20:36] -rw-r--r--. 1 boincer umatlas        27 Jun  4 12:20 wrapper_checkpoint.txt
[2025-06-04 12:20:36] -rw-------. 1 boincer umatlas      4734 Jun  4 12:20 pilotlog.txt
[2025-06-04 12:20:36] -rw-------. 1 boincer umatlas    362008 Jun  4 12:20 log.44871837._067892.job.log.1
[2025-06-04 12:20:36] -rw-------. 1 boincer umatlas       357 Jun  4 12:20 output.list
[2025-06-04 12:20:36] -rw-r--r--. 1 boincer umatlas       620 Jun  4 12:20 runtime_log
[2025-06-04 12:20:36] -rw-------. 1 boincer umatlas    737280 Jun  4 12:20 result.tar.gz
[2025-06-04 12:20:36] -rw-r--r--. 1 boincer umatlas      8666 Jun  4 12:20 runtime_log.err
[2025-06-04 12:20:36] -rw-------. 1 boincer umatlas       653 Jun  4 12:20 PR3NDm4M9d7nsSi4ap6QjLDmwznN0nGgGQJmUXzaDmwVZKDmUUbaTm.diag
[2025-06-04 12:20:36] -rw-r--r--. 1 boincer umatlas     21812 Jun  4 12:20 stderr.txt
[2025-06-04 12:20:36] HITS file was successfully produced:
[2025-06-04 12:20:36] -rw-------. 1 boincer umatlas 196545129 Jun  4 12:19 shared/HITS.pool.root.1
[2025-06-04 12:20:36]  *** Contents of shared directory: ***
[2025-06-04 12:20:36] total 414372
[2025-06-04 12:20:36] -rw-r--r--. 2 boincer umatlas 226497498 Jun  4 11:21 ATLAS.root_0
[2025-06-04 12:20:36] -rw-r--r--. 2 boincer umatlas     15093 Jun  4 11:21 start_atlas.sh
[2025-06-04 12:20:36] -rw-r--r--. 2 boincer umatlas    508879 Jun  4 11:21 input.tar.gz
[2025-06-04 12:20:36] -rw-------. 1 boincer umatlas 196545129 Jun  4 12:19 HITS.pool.root.1
[2025-06-04 12:20:36] -rw-------. 1 boincer umatlas    737280 Jun  4 12:20 result.tar.gz
12:20:38 (1554971): run_atlas exited; CPU time 38241.698694
12:20:38 (1554971): called boinc_finish(0)

</stderr_txt>
]]>

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