Stderr output

<core_client_version>7.7.0</core_client_version>
<![CDATA[
<stderr_txt>
11:32:16 (232826): wrapper (7.7.26015): starting
11:32:16 (232826): wrapper: running run_atlas (--nthreads 9)
[2025-06-04 11:32:16] Arguments: --nthreads 9
[2025-06-04 11:32:16] Threads: 9
[2025-06-04 11:32:16] Checking for CVMFS
[2025-06-04 11:32:17] Probing /cvmfs/atlas.cern.ch... OK
[2025-06-04 11:32:17] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-06-04 11:32:17] Running cvmfs_config stat atlas.cern.ch
[2025-06-04 11:32:17] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-06-04 11:32:17] 2.11.2.0 6636 28967 247340 146786 0 196 17763660 18432001 6790 130560 0 69457505 99.499 67775769 29331 http://cvmfs-s1fnal.opensciencegrid.org:8000/cvmfs/atlas.cern.ch http://192.41.237.109:6081 1
[2025-06-04 11:32:17] CVMFS is ok
[2025-06-04 11:32:17] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-06-04 11:32:17] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2025-06-04 11:32:17] Further information can be found at the LHC@home message board.
[2025-06-04 11:32:17] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-06-04 11:32:17] Checking for apptainer binary...
[2025-06-04 11:32:17] Using apptainer found in PATH at /usr/bin/apptainer
[2025-06-04 11:32:17] Running /usr/bin/apptainer --version
[2025-06-04 11:32:17] apptainer version 1.3.2-1.el7
[2025-06-04 11:32:17] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-06-04 11:32:18] c-210-37-3.aglt2.org
[2025-06-04 11:32:18] apptainer works
[2025-06-04 11:32:18] Set ATHENA_PROC_NUMBER=9
[2025-06-04 11:32:18] Set ATHENA_CORE_NUMBER=9
[2025-06-04 11:32:18] Starting ATLAS job with PandaID=6668229895
[2025-06-04 11:32:18] Running command: /usr/bin/apptainer exec -B /cvmfs,/tmp/boinchome/slots/1 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-06-04 13:05:27]  *** The last 200 lines of the pilot log: ***
[2025-06-04 13:05:27]  filetype=log
[2025-06-04 13:05:27]  guid=7ba015db-f839-400d-a459-7a44d8d5158d
[2025-06-04 13:05:27]  inputddms=['NDGF-T1_DATADISK', 'CERN-PROD_DATADISK']
[2025-06-04 13:05:27]  is_altstaged=None
[2025-06-04 13:05:27]  is_tar=False
[2025-06-04 13:05:27]  lfn=log.44871837._080653.job.log.tgz.1
[2025-06-04 13:05:27]  mtime=0
[2025-06-04 13:05:27]  protocol_id=None
[2025-06-04 13:05:27]  protocols=[{'endpoint': 'davs://dav.ndgf.org:443', 'flavour': 'WEBDAV', 'id': 331, 'path': '/atlas/disk/atlasdatadisk/rucio/'}]
[2025-06-04 13:05:27]  replicas=None
[2025-06-04 13:05:27]  scope=mc23_13p6TeV
[2025-06-04 13:05:27]  status=None
[2025-06-04 13:05:27]  status_code=0
[2025-06-04 13:05:27]  storage_token=
[2025-06-04 13:05:27]  surl=/tmp/boinchome/slots/1/PanDA_Pilot-6668229895/log.44871837._080653.job.log.tgz.1
[2025-06-04 13:05:27]  turl=davs://dav.ndgf.org:443/atlas/disk/atlasdatadisk/rucio/mc23_13p6TeV/16/b0/log.44871837._080653.job.log.tgz.1
[2025-06-04 13:05:27]  workdir=None
[2025-06-04 13:05:27] ]
[2025-06-04 13:05:27] 2025-06-04 17:05:01,720 | INFO     | transferring file log.44871837._080653.job.log.tgz.1 from /tmp/boinchome/slots/1/PanDA_Pilot-6668229895/log.44871837._080653.job.log.tgz.1 to /tmp/boinchome/slots/
[2025-06-04 13:05:27] 2025-06-04 17:05:01,720 | INFO     | executing command: /usr/bin/env mv /tmp/boinchome/slots/1/PanDA_Pilot-6668229895/log.44871837._080653.job.log.tgz.1 /tmp/boinchome/slots/1/log.44871837._080653.job
[2025-06-04 13:05:27] 2025-06-04 17:05:01,736 | INFO     | adding to output.list: log.44871837._080653.job.log.tgz.1 davs://dav.ndgf.org:443/atlas/disk/atlasdatadisk/rucio/mc23_13p6TeV/16/b0/log.44871837._080653.job.log.tg
[2025-06-04 13:05:27] 2025-06-04 17:05:01,737 | INFO     | alt stage-out settings: ['pl', 'write_lan', 'w', 'default'], allow_altstageout=False, remain_files=0, has_altstorage=True
[2025-06-04 13:05:27] 2025-06-04 17:05:01,737 | INFO     | summary of transferred files:
[2025-06-04 13:05:27] 2025-06-04 17:05:01,737 | INFO     |  -- lfn=log.44871837._080653.job.log.tgz.1, status_code=0, status=transferred
[2025-06-04 13:05:27] 2025-06-04 17:05:01,738 | INFO     | stage-out finished correctly
[2025-06-04 13:05:27] 2025-06-04 17:05:01,984 | INFO     | finished stage-out for finished payload, adding job to finished_jobs queue
[2025-06-04 13:05:27] 2025-06-04 17:05:02,038 | INFO     | job 6668229895 has state=finished
[2025-06-04 13:05:27] 2025-06-04 17:05:02,039 | INFO     | preparing for final server update for job 6668229895 in state='finished'
[2025-06-04 13:05:27] 2025-06-04 17:05:02,039 | INFO     | this job has now completed (state=finished)
[2025-06-04 13:05:27] 2025-06-04 17:05:02,039 | INFO     | pilot will not update the server (heartbeat message will be written to file)
[2025-06-04 13:05:27] 2025-06-04 17:05:02,039 | INFO     | log transfer has been attempted: DONE
[2025-06-04 13:05:27] 2025-06-04 17:05:02,039 | INFO     | job 6668229895 has finished - writing final server update
[2025-06-04 13:05:27] 2025-06-04 17:05:02,040 | INFO     | total number of processed events: 400 (read)
[2025-06-04 13:05:27] 2025-06-04 17:05:02,043 | INFO     | executing command: lscpu
[2025-06-04 13:05:27] 2025-06-04 17:05:02,096 | INFO     | executing command: export ATLAS_LOCAL_ROOT_BASE=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase;source ${ATLAS_LOCAL_ROOT_BASE}/user/atlasLocalSetup.sh --quiet;lsetup
[2025-06-04 13:05:27] 2025-06-04 17:05:06,905 | INFO     | CPU arch script returned: x86-64-v4
[2025-06-04 13:05:27] 2025-06-04 17:05:06,905 | INFO     | using path: /tmp/boinchome/slots/1/PanDA_Pilot-6668229895/memory_monitor_summary.json (trf name=prmon)
[2025-06-04 13:05:27] 2025-06-04 17:05:06,906 | INFO     | extracted standard info from prmon json
[2025-06-04 13:05:27] 2025-06-04 17:05:06,907 | INFO     | extracted standard memory fields from prmon json
[2025-06-04 13:05:27] 2025-06-04 17:05:06,907 | WARNING  | GPU info not found in prmon json: 'gpu'
[2025-06-04 13:05:27] 2025-06-04 17:05:06,907 | WARNING  | format EVNTtoHITS has no such key: dbData
[2025-06-04 13:05:27] 2025-06-04 17:05:06,907 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2025-06-04 13:05:27] 2025-06-04 17:05:06,910 | INFO     | fitting pss+swap vs Time
[2025-06-04 13:05:27] 2025-06-04 17:05:06,910 | INFO     | sum of square deviations: 183761585.0
[2025-06-04 13:05:27] 2025-06-04 17:05:06,910 | INFO     | sum of deviations: -5383867960.500001
[2025-06-04 13:05:27] 2025-06-04 17:05:06,911 | INFO     | mean x: 1749054023.5
[2025-06-04 13:05:27] 2025-06-04 17:05:06,911 | INFO     | mean y: 2601046.8928571427
[2025-06-04 13:05:27] 2025-06-04 17:05:06,911 | INFO     | -- intersect: 51246586117.57706
[2025-06-04 13:05:27] 2025-06-04 17:05:06,911 | INFO     | intersect: 51246586117.57706
[2025-06-04 13:05:27] 2025-06-04 17:05:06,911 | INFO     | chi2: 0.02032898298028923
[2025-06-04 13:05:27] 2025-06-04 17:05:06,911 | INFO     | -- intersect: 51246586117.57706
[2025-06-04 13:05:27] 2025-06-04 17:05:06,911 | INFO     | current memory leak: -29.30 B/s (using 84 data points, chi2=0.02)
[2025-06-04 13:05:27] 2025-06-04 17:05:06,912 | INFO     | ..............................
[2025-06-04 13:05:27] 2025-06-04 17:05:06,912 | INFO     | . Timing measurements:
[2025-06-04 13:05:27] 2025-06-04 17:05:06,912 | INFO     | . get job = 0 s
[2025-06-04 13:05:27] 2025-06-04 17:05:06,912 | INFO     | . initial setup = 2 s
[2025-06-04 13:05:27] 2025-06-04 17:05:06,912 | INFO     | . payload setup = 11 s
[2025-06-04 13:05:27] 2025-06-04 17:05:06,912 | INFO     | . stage-in = 0 s
[2025-06-04 13:05:27] 2025-06-04 17:05:06,912 | INFO     | . payload execution = 5516 s
[2025-06-04 13:05:27] 2025-06-04 17:05:06,913 | INFO     | . stage-out = 0 s
[2025-06-04 13:05:27] 2025-06-04 17:05:06,913 | INFO     | . log creation = 0 s
[2025-06-04 13:05:27] 2025-06-04 17:05:06,913 | INFO     | ..............................
[2025-06-04 13:05:27] 2025-06-04 17:05:06,963 | INFO     | 
[2025-06-04 13:05:27] 2025-06-04 17:05:06,963 | INFO     | job summary report
[2025-06-04 13:05:27] 2025-06-04 17:05:06,963 | INFO     | --------------------------------------------------
[2025-06-04 13:05:27] 2025-06-04 17:05:06,963 | INFO     | PanDA job id: 6668229895
[2025-06-04 13:05:27] 2025-06-04 17:05:06,963 | INFO     | task id: 44871837
[2025-06-04 13:05:27] 2025-06-04 17:05:06,964 | INFO     | errors: (none)
[2025-06-04 13:05:27] 2025-06-04 17:05:06,964 | INFO     | status: LOG_TRANSFER = DONE 
[2025-06-04 13:05:27] 2025-06-04 17:05:06,964 | INFO     | pilot state: finished 
[2025-06-04 13:05:27] 2025-06-04 17:05:06,964 | INFO     | transexitcode: 0
[2025-06-04 13:05:27] 2025-06-04 17:05:06,964 | INFO     | exeerrorcode: 0
[2025-06-04 13:05:27] 2025-06-04 17:05:06,964 | INFO     | exeerrordiag: 
[2025-06-04 13:05:27] 2025-06-04 17:05:06,964 | INFO     | exitcode: 0
[2025-06-04 13:05:27] 2025-06-04 17:05:06,964 | INFO     | exitmsg: OK
[2025-06-04 13:05:27] 2025-06-04 17:05:06,964 | INFO     | cpuconsumptiontime: 44952 s
[2025-06-04 13:05:27] 2025-06-04 17:05:06,965 | INFO     | nevents: 400
[2025-06-04 13:05:27] 2025-06-04 17:05:06,965 | INFO     | neventsw: 0
[2025-06-04 13:05:27] 2025-06-04 17:05:06,965 | INFO     | pid: 246891
[2025-06-04 13:05:27] 2025-06-04 17:05:06,965 | INFO     | pgrp: 246891
[2025-06-04 13:05:27] 2025-06-04 17:05:06,965 | INFO     | corecount: 9
[2025-06-04 13:05:27] 2025-06-04 17:05:06,965 | INFO     | event service: False
[2025-06-04 13:05:27] 2025-06-04 17:05:06,965 | INFO     | sizes: {0: 2397215, 1: 2397414, 6: 2397620, 11: 2397648, 5530: 2424139, 5531: 2433264, 5536: 2433378}
[2025-06-04 13:05:27] 2025-06-04 17:05:06,965 | INFO     | --------------------------------------------------
[2025-06-04 13:05:27] 2025-06-04 17:05:06,966 | INFO     | 
[2025-06-04 13:05:27] 2025-06-04 17:05:06,966 | INFO     | executing command: ls -lF /tmp/boinchome/slots/1
[2025-06-04 13:05:27] 2025-06-04 17:05:06,990 | INFO     | queue jobs had 0 job(s) [purged]
[2025-06-04 13:05:27] 2025-06-04 17:05:06,990 | INFO     | queue payloads had 0 job(s) [purged]
[2025-06-04 13:05:27] 2025-06-04 17:05:06,990 | INFO     | queue data_in had 0 job(s) [purged]
[2025-06-04 13:05:27] 2025-06-04 17:05:06,990 | INFO     | queue data_out had 0 job(s) [purged]
[2025-06-04 13:05:27] 2025-06-04 17:05:06,990 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-06-04 13:05:27] 2025-06-04 17:05:06,991 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-06-04 13:05:27] 2025-06-04 17:05:06,991 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-06-04 13:05:27] 2025-06-04 17:05:06,991 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-06-04 13:05:27] 2025-06-04 17:05:06,991 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-06-04 13:05:27] 2025-06-04 17:05:06,991 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-06-04 13:05:27] 2025-06-04 17:05:06,991 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-06-04 13:05:27] 2025-06-04 17:05:06,991 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-06-04 13:05:27] 2025-06-04 17:05:06,991 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-06-04 13:05:27] 2025-06-04 17:05:06,991 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-06-04 13:05:27] 2025-06-04 17:05:06,991 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-06-04 13:05:27] 2025-06-04 17:05:06,991 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-06-04 13:05:27] 2025-06-04 17:05:06,991 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-06-04 13:05:27] 2025-06-04 17:05:06,991 | INFO     | queue completed_jobids has 1 job(s)
[2025-06-04 13:05:27] 2025-06-04 17:05:06,992 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-06-04 13:05:27] 2025-06-04 17:05:06,992 | INFO     | queue messages had 0 job(s) [purged]
[2025-06-04 13:05:27] 2025-06-04 17:05:06,992 | INFO     | job 6668229895 has completed (purged errors)
[2025-06-04 13:05:27] 2025-06-04 17:05:06,992 | INFO     | overall cleanup function is called
[2025-06-04 13:05:27] 2025-06-04 17:05:07,706 | WARNING  | process 246891 can no longer be monitored (due to stat problems) - aborting
[2025-06-04 13:05:27] 2025-06-04 17:05:07,816 | INFO     | using path: /tmp/boinchome/slots/1/memory_monitor_summary.json (trf name=prmon)
[2025-06-04 13:05:27] 2025-06-04 17:05:07,959 | INFO     | number of running child processes to parent process 246891: 1
[2025-06-04 13:05:27] 2025-06-04 17:05:07,959 | INFO     | maximum number of monitored processes: 6
[2025-06-04 13:05:27] 2025-06-04 17:05:07,959 | INFO     | aborting job monitoring since job object (job id=6668229895) has expired
[2025-06-04 13:05:27] 2025-06-04 17:05:07,999 | INFO     | --- collectZombieJob: --- 10, [246891]
[2025-06-04 13:05:27] 2025-06-04 17:05:07,999 | INFO     | zombie collector waiting for pid 246891
[2025-06-04 13:05:27] 2025-06-04 17:05:07,999 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-06-04 13:05:27] 2025-06-04 17:05:07,999 | INFO     | collected zombie processes
[2025-06-04 13:05:27] 2025-06-04 17:05:07,999 | INFO     | will attempt to kill all subprocesses of pid=246891
[2025-06-04 13:05:27] 2025-06-04 17:05:08,105 | INFO     | process IDs to be killed: [246891] (in reverse order)
[2025-06-04 13:05:27] 2025-06-04 17:05:08,178 | WARNING  | found no corresponding commands to process id(s)
[2025-06-04 13:05:27] 2025-06-04 17:05:08,179 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-06-04 13:05:27] 2025-06-04 17:05:08,187 | INFO     | did not find any defunct processes belonging to 246891
[2025-06-04 13:05:27] 2025-06-04 17:05:08,192 | INFO     | did not find any defunct processes belonging to 246891
[2025-06-04 13:05:27] 2025-06-04 17:05:08,193 | INFO     | ready for new job
[2025-06-04 13:05:27] 2025-06-04 17:05:08,193 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-06-04 13:05:27] 2025-06-04 17:05:08,194 | INFO     | **************************************
[2025-06-04 13:05:27] 2025-06-04 17:05:08,194 | INFO     | ***  PanDA Pilot version 3.10.2.2  ***
[2025-06-04 13:05:27] 2025-06-04 17:05:08,194 | INFO     | **************************************
[2025-06-04 13:05:27] 2025-06-04 17:05:08,194 | INFO     | 
[2025-06-04 13:05:27] 2025-06-04 17:05:08,197 | INFO     | architecture information:
[2025-06-04 13:05:27] 2025-06-04 17:05:08,197 | INFO     | executing command: cat /etc/os-release
[2025-06-04 13:05:27] 2025-06-04 17:05:08,212 | INFO     | cat /etc/os-release:
[2025-06-04 13:05:27] NAME="CentOS Linux"
[2025-06-04 13:05:27] VERSION="7 (Core)"
[2025-06-04 13:05:27] ID="centos"
[2025-06-04 13:05:27] ID_LIKE="rhel fedora"
[2025-06-04 13:05:27] VERSION_ID="7"
[2025-06-04 13:05:27] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-06-04 13:05:27] ANSI_COLOR="0;31"
[2025-06-04 13:05:27] CPE_NAME="cpe:/o:centos:centos:7"
[2025-06-04 13:05:27] HOME_URL="https://www.centos.org/"
[2025-06-04 13:05:27] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-06-04 13:05:27] 
[2025-06-04 13:05:27] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-06-04 13:05:27] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-06-04 13:05:27] REDHAT_SUPPORT_PRODUCT="centos"
[2025-06-04 13:05:27] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-06-04 13:05:27] 
[2025-06-04 13:05:27] 2025-06-04 17:05:08,213 | INFO     | **************************************
[2025-06-04 13:05:27] 2025-06-04 17:05:08,714 | INFO     | executing command: df -mP /tmp/boinchome/slots/1
[2025-06-04 13:05:27] 2025-06-04 17:05:08,739 | INFO     | sufficient remaining disk space (57585696768 B)
[2025-06-04 13:05:27] 2025-06-04 17:05:08,739 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-06-04 13:05:27] 2025-06-04 17:05:08,740 | INFO     | current server update state: UPDATING_FINAL
[2025-06-04 13:05:27] 2025-06-04 17:05:08,740 | INFO     | update_server=False
[2025-06-04 13:05:27] 2025-06-04 17:05:08,740 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-06-04 13:05:27] 2025-06-04 17:05:08,740 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-06-04 13:05:27] 2025-06-04 17:05:08,741 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-06-04 13:05:27] 2025-06-04 17:05:08,741 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-06-04 13:05:27] 2025-06-04 17:05:08,741 | INFO     | will abort loop
[2025-06-04 13:05:27] 2025-06-04 17:05:08,808 | INFO     | found 0 job(s) in 20 queues
[2025-06-04 13:05:27] 2025-06-04 17:05:08,808 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-06-04 13:05:27] 2025-06-04 17:05:08,808 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-06-04 13:05:27] 2025-06-04 17:05:08,965 | INFO     | all job control threads have been joined
[2025-06-04 13:05:27] 2025-06-04 17:05:08,971 | INFO     | all data control threads have been joined
[2025-06-04 13:05:27] 2025-06-04 17:05:09,072 | INFO     | all payload control threads have been joined
[2025-06-04 13:05:27] 2025-06-04 17:05:09,745 | INFO     | [job] retrieve thread has finished
[2025-06-04 13:05:27] 2025-06-04 17:05:09,746 | INFO     | [job] queue monitor thread has finished
[2025-06-04 13:05:27] 2025-06-04 17:05:09,747 | INFO     | [job] job monitor thread has finished
[2025-06-04 13:05:27] 2025-06-04 17:05:09,795 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-06-04 13:05:27] 2025-06-04 17:05:09,968 | INFO     | [job] control thread has finished
[2025-06-04 13:05:27] 2025-06-04 17:05:09,976 | INFO     | [data] control thread has finished
[2025-06-04 13:05:27] 2025-06-04 17:05:10,078 | INFO     | [payload] control thread has finished
[2025-06-04 13:05:27] 2025-06-04 17:05:10,154 | INFO     | [payload] validate_post thread has finished
[2025-06-04 13:05:27] 2025-06-04 17:05:10,662 | INFO     | [payload] failed_post thread has finished
[2025-06-04 13:05:27] 2025-06-04 17:05:10,692 | INFO     | [data] copytool_in thread has finished
[2025-06-04 13:05:27] 2025-06-04 17:05:10,741 | INFO     | [job] create_data_payload thread has finished
[2025-06-04 13:05:27] 2025-06-04 17:05:10,841 | INFO     | [job] validate thread has finished
[2025-06-04 13:05:27] 2025-06-04 17:05:11,019 | INFO     | [payload] execute_payloads thread has finished
[2025-06-04 13:05:27] 2025-06-04 17:05:11,027 | INFO     | [payload] validate_pre thread has finished
[2025-06-04 13:05:27] 2025-06-04 17:05:11,801 | INFO     | [data] copytool_out thread has finished
[2025-06-04 13:05:27] 2025-06-04 17:05:12,748 | INFO     | [data] queue_monitor thread has finished
[2025-06-04 13:05:27] 2025-06-04 17:05:19,259 | INFO     | job.realtimelogging is not enabled
[2025-06-04 13:05:27] 2025-06-04 17:05:20,264 | INFO     | [payload] run_realtimelog thread has finished
[2025-06-04 13:05:27] 2025-06-04 17:05:21,632 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140718217615168)>', '<ExcThread(monitor, started 140717909317376)>']
[2025-06-04 13:05:27] 2025-06-04 17:05:21,865 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-06-04 13:05:27] 2025-06-04 17:05:21,865 | INFO     | [monitor] control thread has ended
[2025-06-04 13:05:27] 2025-06-04 17:05:26,657 | INFO     | all workflow threads have been joined
[2025-06-04 13:05:27] 2025-06-04 17:05:26,657 | INFO     | end of generic workflow (traces error code: 0)
[2025-06-04 13:05:27] 2025-06-04 17:05:26,658 | INFO     | traces error code: 0
[2025-06-04 13:05:27] 2025-06-04 17:05:26,658 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-06-04 13:05:27] 2025-06-04 17:05:26,778 [wrapper] ==== pilot stdout END ====
[2025-06-04 13:05:27] 2025-06-04 17:05:26,783 [wrapper] ==== wrapper stdout RESUME ====
[2025-06-04 13:05:27] 2025-06-04 17:05:26,786 [wrapper] pilotpid: 236414
[2025-06-04 13:05:27] 2025-06-04 17:05:26,790 [wrapper] Pilot exit status: 0
[2025-06-04 13:05:27] 2025-06-04 17:05:26,804 [wrapper] pandaids: 6668229895
[2025-06-04 13:05:27] 2025-06-04 17:05:26,859 [wrapper] cleanup supervisor_pilot  70751 236415
[2025-06-04 13:05:27] 2025-06-04 17:05:26,863 [wrapper] Test setup, not cleaning
[2025-06-04 13:05:27] 2025-06-04 17:05:26,868 [wrapper] apfmon messages muted
[2025-06-04 13:05:27] 2025-06-04 17:05:26,871 [wrapper] ==== wrapper stdout END ====
[2025-06-04 13:05:27] 2025-06-04 17:05:26,875 [wrapper] ==== wrapper stderr END ====
[2025-06-04 13:05:27]  *** Error codes and diagnostics ***
[2025-06-04 13:05:27]     "exeErrorCode": 0,
[2025-06-04 13:05:27]     "exeErrorDiag": "",
[2025-06-04 13:05:27]     "pilotErrorCode": 0,
[2025-06-04 13:05:27]     "pilotErrorDiag": "",
[2025-06-04 13:05:27]  *** Listing of results directory ***
[2025-06-04 13:05:27] total 420900
[2025-06-04 13:05:27] -rwx------ 1 boincer umatlas     37140 May 28 03:31 runpilot2-wrapper.sh
[2025-06-04 13:05:27] -rw-r--r-- 1 boincer umatlas      5111 May 28 03:31 queuedata.json
[2025-06-04 13:05:27] -rw-r--r-- 1 boincer umatlas    495897 May 28 03:31 pilot3.tar.gz
[2025-06-04 13:05:27] -rw-r--r-- 1 boincer umatlas       100 Jun  4 11:32 wrapper_26015_x86_64-pc-linux-gnu
[2025-06-04 13:05:27] -rwxr-xr-x 1 boincer umatlas      7986 Jun  4 11:32 run_atlas
[2025-06-04 13:05:27] -rw-r--r-- 1 boincer umatlas       105 Jun  4 11:32 job.xml
[2025-06-04 13:05:27] -rw-r--r-- 2 boincer umatlas 224211663 Jun  4 11:32 EVNT.44871834._003149.pool.root.1
[2025-06-04 13:05:27] -rw-r--r-- 2 boincer umatlas     15093 Jun  4 11:32 start_atlas.sh
[2025-06-04 13:05:27] drwxrwx--x 2 boincer umatlas      4096 Jun  4 11:32 shared
[2025-06-04 13:05:27] -rw-r--r-- 2 boincer umatlas    508874 Jun  4 11:32 input.tar.gz
[2025-06-04 13:05:27] -rw-r--r-- 1 boincer umatlas         0 Jun  4 11:32 boinc_lockfile
[2025-06-04 13:05:27] -rw-r--r-- 1 boincer umatlas      2556 Jun  4 11:32 pandaJob.out
[2025-06-04 13:05:27] -rw------- 1 boincer umatlas    990989 Jun  4 11:32 agis_schedconf.cvmfs.json
[2025-06-04 13:05:27] -rw------- 1 boincer umatlas   1598969 Jun  4 11:32 agis_ddmendpoints.agis.ALL.json
[2025-06-04 13:05:27] drwx------ 4 boincer umatlas      4096 Jun  4 11:32 pilot3
[2025-06-04 13:05:27] -rw-r--r-- 1 boincer umatlas      6354 Jun  4 13:00 init_data.xml
[2025-06-04 13:05:27] -rw------- 1 boincer umatlas 201237584 Jun  4 13:04 HITS.44871837._080653.pool.root.1
[2025-06-04 13:05:27] -rw-r--r-- 1 boincer umatlas       529 Jun  4 13:04 boinc_task_state.xml
[2025-06-04 13:05:27] -rw------- 1 boincer umatlas        95 Jun  4 13:04 pilot_heartbeat.json
[2025-06-04 13:05:27] -rw------- 1 boincer umatlas      1051 Jun  4 13:04 memory_monitor_summary.json
[2025-06-04 13:05:27] -rw------- 1 boincer umatlas    313439 Jun  4 13:05 log.44871837._080653.job.log.tgz.1
[2025-06-04 13:05:27] -rw------- 1 boincer umatlas      7740 Jun  4 13:05 heartbeat.json
[2025-06-04 13:05:27] -rw-r--r-- 1 boincer umatlas      8192 Jun  4 13:05 boinc_mmap_file
[2025-06-04 13:05:27] -rw-r--r-- 1 boincer umatlas        27 Jun  4 13:05 wrapper_checkpoint.txt
[2025-06-04 13:05:27] -rw------- 1 boincer umatlas      4427 Jun  4 13:05 pilotlog.txt
[2025-06-04 13:05:27] -rw------- 1 boincer umatlas    542974 Jun  4 13:05 log.44871837._080653.job.log.1
[2025-06-04 13:05:27] -rw------- 1 boincer umatlas       357 Jun  4 13:05 output.list
[2025-06-04 13:05:27] -rw-r--r-- 1 boincer umatlas       620 Jun  4 13:05 runtime_log
[2025-06-04 13:05:27] -rw------- 1 boincer umatlas    880640 Jun  4 13:05 result.tar.gz
[2025-06-04 13:05:27] -rw-r--r-- 1 boincer umatlas      8669 Jun  4 13:05 runtime_log.err
[2025-06-04 13:05:27] -rw------- 1 boincer umatlas       658 Jun  4 13:05 eqwKDmtQQe7n9Rq4apOajLDm4fhM0noT9bVof3QYDmY9SKDmdQRVFn.diag
[2025-06-04 13:05:27] -rw-r--r-- 1 boincer umatlas     21161 Jun  4 13:05 stderr.txt
[2025-06-04 13:05:27] HITS file was successfully produced:
[2025-06-04 13:05:27] -rw------- 1 boincer umatlas 201237584 Jun  4 13:04 shared/HITS.pool.root.1
[2025-06-04 13:05:27]  *** Contents of shared directory: ***
[2025-06-04 13:05:27] total 416864
[2025-06-04 13:05:27] -rw-r--r-- 2 boincer umatlas 224211663 Jun  4 11:32 ATLAS.root_0
[2025-06-04 13:05:27] -rw-r--r-- 2 boincer umatlas     15093 Jun  4 11:32 start_atlas.sh
[2025-06-04 13:05:27] -rw-r--r-- 2 boincer umatlas    508874 Jun  4 11:32 input.tar.gz
[2025-06-04 13:05:27] -rw------- 1 boincer umatlas 201237584 Jun  4 13:04 HITS.pool.root.1
[2025-06-04 13:05:27] -rw------- 1 boincer umatlas    880640 Jun  4 13:05 result.tar.gz
13:05:28 (232826): run_atlas exited; CPU time 44987.627984
13:05:28 (232826): called boinc_finish(0)

</stderr_txt>
]]>

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