Stderr output

<core_client_version>7.7.0</core_client_version>
<![CDATA[
<stderr_txt>
11:16:36 (249424): wrapper (7.7.26015): starting
11:16:36 (249424): wrapper: running run_atlas (--nthreads 9)
[2025-06-04 11:16:36] Arguments: --nthreads 9
[2025-06-04 11:16:36] Threads: 9
[2025-06-04 11:16:36] Checking for CVMFS
[2025-06-04 11:16:37] Probing /cvmfs/atlas.cern.ch... OK
[2025-06-04 11:16:37] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-06-04 11:16:37] Running cvmfs_config stat atlas.cern.ch
[2025-06-04 11:16:37] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-06-04 11:16:37] 2.11.2.0 5563 28951 238064 146783 0 71 12946181 18432001 5592 130560 0 69434772 99.454 72507573 29231 http://cvmfs-s1fnal.opensciencegrid.org:8000/cvmfs/atlas.cern.ch http://192.41.237.109:6081 1
[2025-06-04 11:16:37] CVMFS is ok
[2025-06-04 11:16:37] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-06-04 11:16:37] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2025-06-04 11:16:37] Further information can be found at the LHC@home message board.
[2025-06-04 11:16:37] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-06-04 11:16:37] Checking for apptainer binary...
[2025-06-04 11:16:37] Using apptainer found in PATH at /usr/bin/apptainer
[2025-06-04 11:16:37] Running /usr/bin/apptainer --version
[2025-06-04 11:16:37] apptainer version 1.3.2-1.el7
[2025-06-04 11:16:37] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-06-04 11:16:38] c-210-35-2.aglt2.org
[2025-06-04 11:16:38] apptainer works
[2025-06-04 11:16:38] Set ATHENA_PROC_NUMBER=9
[2025-06-04 11:16:38] Set ATHENA_CORE_NUMBER=9
[2025-06-04 11:16:38] Starting ATLAS job with PandaID=6666805768
[2025-06-04 11:16:38] Running command: /usr/bin/apptainer exec -B /cvmfs,/tmp/boinchome/slots/0 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-06-04 12:55:52]  *** The last 200 lines of the pilot log: ***
[2025-06-04 12:55:52]  filesize=324211
[2025-06-04 12:55:52]  filetype=log
[2025-06-04 12:55:52]  guid=6f03751d-0c38-4e3b-abc1-ec531ce30092
[2025-06-04 12:55:52]  inputddms=['NDGF-T1_DATADISK', 'CERN-PROD_DATADISK']
[2025-06-04 12:55:52]  is_altstaged=None
[2025-06-04 12:55:52]  is_tar=False
[2025-06-04 12:55:52]  lfn=log.44871837._063242.job.log.tgz.1
[2025-06-04 12:55:52]  mtime=0
[2025-06-04 12:55:52]  protocol_id=None
[2025-06-04 12:55:52]  protocols=[{'endpoint': 'davs://dav.ndgf.org:443', 'flavour': 'WEBDAV', 'id': 331, 'path': '/atlas/disk/atlasdatadisk/rucio/'}]
[2025-06-04 12:55:52]  replicas=None
[2025-06-04 12:55:52]  scope=mc23_13p6TeV
[2025-06-04 12:55:52]  status=None
[2025-06-04 12:55:52]  status_code=0
[2025-06-04 12:55:52]  storage_token=
[2025-06-04 12:55:52]  surl=/tmp/boinchome/slots/0/PanDA_Pilot-6666805768/log.44871837._063242.job.log.tgz.1
[2025-06-04 12:55:52]  turl=davs://dav.ndgf.org:443/atlas/disk/atlasdatadisk/rucio/mc23_13p6TeV/1b/87/log.44871837._063242.job.log.tgz.1
[2025-06-04 12:55:52]  workdir=None
[2025-06-04 12:55:52] ]
[2025-06-04 12:55:52] 2025-06-04 16:55:26,736 | INFO     | transferring file log.44871837._063242.job.log.tgz.1 from /tmp/boinchome/slots/0/PanDA_Pilot-6666805768/log.44871837._063242.job.log.tgz.1 to /tmp/boinchome/slots/
[2025-06-04 12:55:52] 2025-06-04 16:55:26,736 | INFO     | executing command: /usr/bin/env mv /tmp/boinchome/slots/0/PanDA_Pilot-6666805768/log.44871837._063242.job.log.tgz.1 /tmp/boinchome/slots/0/log.44871837._063242.job
[2025-06-04 12:55:52] 2025-06-04 16:55:26,754 | INFO     | adding to output.list: log.44871837._063242.job.log.tgz.1 davs://dav.ndgf.org:443/atlas/disk/atlasdatadisk/rucio/mc23_13p6TeV/1b/87/log.44871837._063242.job.log.tg
[2025-06-04 12:55:52] 2025-06-04 16:55:26,755 | INFO     | alt stage-out settings: ['pl', 'write_lan', 'w', 'default'], allow_altstageout=False, remain_files=0, has_altstorage=True
[2025-06-04 12:55:52] 2025-06-04 16:55:26,755 | INFO     | summary of transferred files:
[2025-06-04 12:55:52] 2025-06-04 16:55:26,755 | INFO     |  -- lfn=log.44871837._063242.job.log.tgz.1, status_code=0, status=transferred
[2025-06-04 12:55:52] 2025-06-04 16:55:26,755 | INFO     | stage-out finished correctly
[2025-06-04 12:55:52] 2025-06-04 16:55:27,656 | INFO     | finished stage-out for finished payload, adding job to finished_jobs queue
[2025-06-04 12:55:52] 2025-06-04 16:55:27,733 | INFO     | job 6666805768 has state=finished
[2025-06-04 12:55:52] 2025-06-04 16:55:27,733 | INFO     | preparing for final server update for job 6666805768 in state='finished'
[2025-06-04 12:55:52] 2025-06-04 16:55:27,734 | INFO     | this job has now completed (state=finished)
[2025-06-04 12:55:52] 2025-06-04 16:55:27,734 | INFO     | pilot will not update the server (heartbeat message will be written to file)
[2025-06-04 12:55:52] 2025-06-04 16:55:27,734 | INFO     | log transfer has been attempted: DONE
[2025-06-04 12:55:52] 2025-06-04 16:55:27,734 | INFO     | job 6666805768 has finished - writing final server update
[2025-06-04 12:55:52] 2025-06-04 16:55:27,734 | INFO     | total number of processed events: 400 (read)
[2025-06-04 12:55:52] 2025-06-04 16:55:27,738 | INFO     | executing command: lscpu
[2025-06-04 12:55:52] 2025-06-04 16:55:27,785 | INFO     | executing command: export ATLAS_LOCAL_ROOT_BASE=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase;source ${ATLAS_LOCAL_ROOT_BASE}/user/atlasLocalSetup.sh --quiet;lsetup
[2025-06-04 12:55:52] 2025-06-04 16:55:31,550 | WARNING  | process 259519 can no longer be monitored (due to stat problems) - aborting
[2025-06-04 12:55:52] 2025-06-04 16:55:31,551 | INFO     | using path: /tmp/boinchome/slots/0/PanDA_Pilot-6666805768/memory_monitor_summary.json (trf name=prmon)
[2025-06-04 12:55:52] 2025-06-04 16:55:31,714 | INFO     | number of running child processes to parent process 259519: 1
[2025-06-04 12:55:52] 2025-06-04 16:55:31,714 | INFO     | maximum number of monitored processes: 6
[2025-06-04 12:55:52] 2025-06-04 16:55:32,682 | INFO     | CPU arch script returned: x86-64-v4
[2025-06-04 12:55:52] 2025-06-04 16:55:32,683 | INFO     | using path: /tmp/boinchome/slots/0/PanDA_Pilot-6666805768/memory_monitor_summary.json (trf name=prmon)
[2025-06-04 12:55:52] 2025-06-04 16:55:32,683 | INFO     | extracted standard info from prmon json
[2025-06-04 12:55:52] 2025-06-04 16:55:32,683 | INFO     | extracted standard memory fields from prmon json
[2025-06-04 12:55:52] 2025-06-04 16:55:32,684 | WARNING  | GPU info not found in prmon json: 'gpu'
[2025-06-04 12:55:52] 2025-06-04 16:55:32,684 | WARNING  | format EVNTtoHITS has no such key: dbData
[2025-06-04 12:55:52] 2025-06-04 16:55:32,684 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2025-06-04 12:55:52] 2025-06-04 16:55:32,686 | INFO     | fitting pss+swap vs Time
[2025-06-04 12:55:52] 2025-06-04 16:55:32,686 | INFO     | sum of square deviations: 226022842.5
[2025-06-04 12:55:52] 2025-06-04 16:55:32,687 | INFO     | sum of deviations: -16424228711.0
[2025-06-04 12:55:52] 2025-06-04 16:55:32,687 | INFO     | mean x: 1749053255.5
[2025-06-04 12:55:52] 2025-06-04 16:55:32,687 | INFO     | mean y: 2711509.9111111113
[2025-06-04 12:55:52] 2025-06-04 16:55:32,687 | INFO     | -- intersect: 127099824254.39455
[2025-06-04 12:55:52] 2025-06-04 16:55:32,687 | INFO     | intersect: 127099824254.39455
[2025-06-04 12:55:52] 2025-06-04 16:55:32,687 | INFO     | chi2: 0.08683592843009753
[2025-06-04 12:55:52] 2025-06-04 16:55:32,687 | INFO     | -- intersect: 127099824254.39455
[2025-06-04 12:55:52] 2025-06-04 16:55:32,688 | INFO     | current memory leak: -72.67 B/s (using 90 data points, chi2=0.09)
[2025-06-04 12:55:52] 2025-06-04 16:55:32,688 | INFO     | ..............................
[2025-06-04 12:55:52] 2025-06-04 16:55:32,688 | INFO     | . Timing measurements:
[2025-06-04 12:55:52] 2025-06-04 16:55:32,688 | INFO     | . get job = 0 s
[2025-06-04 12:55:52] 2025-06-04 16:55:32,688 | INFO     | . initial setup = 2 s
[2025-06-04 12:55:52] 2025-06-04 16:55:32,688 | INFO     | . payload setup = 8 s
[2025-06-04 12:55:52] 2025-06-04 16:55:32,688 | INFO     | . stage-in = 0 s
[2025-06-04 12:55:52] 2025-06-04 16:55:32,688 | INFO     | . payload execution = 5890 s
[2025-06-04 12:55:52] 2025-06-04 16:55:32,689 | INFO     | . stage-out = 0 s
[2025-06-04 12:55:52] 2025-06-04 16:55:32,689 | INFO     | . log creation = 0 s
[2025-06-04 12:55:52] 2025-06-04 16:55:32,689 | INFO     | ..............................
[2025-06-04 12:55:52] 2025-06-04 16:55:32,781 | INFO     | 
[2025-06-04 12:55:52] 2025-06-04 16:55:32,782 | INFO     | job summary report
[2025-06-04 12:55:52] 2025-06-04 16:55:32,782 | INFO     | --------------------------------------------------
[2025-06-04 12:55:52] 2025-06-04 16:55:32,782 | INFO     | PanDA job id: 6666805768
[2025-06-04 12:55:52] 2025-06-04 16:55:32,782 | INFO     | task id: 44871837
[2025-06-04 12:55:52] 2025-06-04 16:55:32,782 | INFO     | errors: (none)
[2025-06-04 12:55:52] 2025-06-04 16:55:32,782 | INFO     | status: LOG_TRANSFER = DONE 
[2025-06-04 12:55:52] 2025-06-04 16:55:32,782 | INFO     | pilot state: finished 
[2025-06-04 12:55:52] 2025-06-04 16:55:32,783 | INFO     | transexitcode: 0
[2025-06-04 12:55:52] 2025-06-04 16:55:32,783 | INFO     | exeerrorcode: 0
[2025-06-04 12:55:52] 2025-06-04 16:55:32,783 | INFO     | exeerrordiag: 
[2025-06-04 12:55:52] 2025-06-04 16:55:32,783 | INFO     | exitcode: 0
[2025-06-04 12:55:52] 2025-06-04 16:55:32,783 | INFO     | exitmsg: OK
[2025-06-04 12:55:52] 2025-06-04 16:55:32,783 | INFO     | cpuconsumptiontime: 46580 s
[2025-06-04 12:55:52] 2025-06-04 16:55:32,783 | INFO     | nevents: 400
[2025-06-04 12:55:52] 2025-06-04 16:55:32,783 | INFO     | neventsw: 0
[2025-06-04 12:55:52] 2025-06-04 16:55:32,783 | INFO     | pid: 259519
[2025-06-04 12:55:52] 2025-06-04 16:55:32,784 | INFO     | pgrp: 259519
[2025-06-04 12:55:52] 2025-06-04 16:55:32,784 | INFO     | corecount: 9
[2025-06-04 12:55:52] 2025-06-04 16:55:32,784 | INFO     | event service: False
[2025-06-04 12:55:52] 2025-06-04 16:55:32,784 | INFO     | sizes: {0: 2397170, 1: 2397369, 5: 2397575, 11: 2397631, 5902: 2424237, 5904: 2433178, 5905: 2433362, 5910: 2433532}
[2025-06-04 12:55:52] 2025-06-04 16:55:32,784 | INFO     | --------------------------------------------------
[2025-06-04 12:55:52] 2025-06-04 16:55:32,784 | INFO     | 
[2025-06-04 12:55:52] 2025-06-04 16:55:32,784 | INFO     | executing command: ls -lF /tmp/boinchome/slots/0
[2025-06-04 12:55:52] 2025-06-04 16:55:32,811 | INFO     | queue jobs had 0 job(s) [purged]
[2025-06-04 12:55:52] 2025-06-04 16:55:32,811 | INFO     | queue payloads had 0 job(s) [purged]
[2025-06-04 12:55:52] 2025-06-04 16:55:32,811 | INFO     | queue data_in had 0 job(s) [purged]
[2025-06-04 12:55:52] 2025-06-04 16:55:32,812 | INFO     | queue data_out had 0 job(s) [purged]
[2025-06-04 12:55:52] 2025-06-04 16:55:32,812 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-06-04 12:55:52] 2025-06-04 16:55:32,812 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-06-04 12:55:52] 2025-06-04 16:55:32,812 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-06-04 12:55:52] 2025-06-04 16:55:32,812 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-06-04 12:55:52] 2025-06-04 16:55:32,812 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-06-04 12:55:52] 2025-06-04 16:55:32,812 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-06-04 12:55:52] 2025-06-04 16:55:32,813 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-06-04 12:55:52] 2025-06-04 16:55:32,813 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-06-04 12:55:52] 2025-06-04 16:55:32,813 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-06-04 12:55:52] 2025-06-04 16:55:32,813 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-06-04 12:55:52] 2025-06-04 16:55:32,813 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-06-04 12:55:52] 2025-06-04 16:55:32,813 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-06-04 12:55:52] 2025-06-04 16:55:32,813 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-06-04 12:55:52] 2025-06-04 16:55:32,813 | INFO     | queue completed_jobids has 1 job(s)
[2025-06-04 12:55:52] 2025-06-04 16:55:32,814 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-06-04 12:55:52] 2025-06-04 16:55:32,814 | INFO     | queue messages had 0 job(s) [purged]
[2025-06-04 12:55:52] 2025-06-04 16:55:32,814 | INFO     | job 6666805768 has completed (purged errors)
[2025-06-04 12:55:52] 2025-06-04 16:55:32,814 | INFO     | overall cleanup function is called
[2025-06-04 12:55:52] 2025-06-04 16:55:33,823 | INFO     | --- collectZombieJob: --- 10, [259519]
[2025-06-04 12:55:52] 2025-06-04 16:55:33,823 | INFO     | zombie collector waiting for pid 259519
[2025-06-04 12:55:52] 2025-06-04 16:55:33,823 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-06-04 12:55:52] 2025-06-04 16:55:33,823 | INFO     | collected zombie processes
[2025-06-04 12:55:52] 2025-06-04 16:55:33,823 | INFO     | will attempt to kill all subprocesses of pid=259519
[2025-06-04 12:55:52] 2025-06-04 16:55:34,008 | INFO     | process IDs to be killed: [259519] (in reverse order)
[2025-06-04 12:55:52] 2025-06-04 16:55:34,085 | WARNING  | found no corresponding commands to process id(s)
[2025-06-04 12:55:52] 2025-06-04 16:55:34,085 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-06-04 12:55:52] 2025-06-04 16:55:34,094 | INFO     | did not find any defunct processes belonging to 259519
[2025-06-04 12:55:52] 2025-06-04 16:55:34,098 | INFO     | did not find any defunct processes belonging to 259519
[2025-06-04 12:55:52] 2025-06-04 16:55:34,098 | INFO     | ready for new job
[2025-06-04 12:55:52] 2025-06-04 16:55:34,099 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-06-04 12:55:52] 2025-06-04 16:55:34,100 | INFO     | **************************************
[2025-06-04 12:55:52] 2025-06-04 16:55:34,100 | INFO     | ***  PanDA Pilot version 3.10.2.2  ***
[2025-06-04 12:55:52] 2025-06-04 16:55:34,100 | INFO     | **************************************
[2025-06-04 12:55:52] 2025-06-04 16:55:34,100 | INFO     | 
[2025-06-04 12:55:52] 2025-06-04 16:55:34,103 | INFO     | architecture information:
[2025-06-04 12:55:52] 2025-06-04 16:55:34,103 | INFO     | executing command: cat /etc/os-release
[2025-06-04 12:55:52] 2025-06-04 16:55:34,122 | INFO     | cat /etc/os-release:
[2025-06-04 12:55:52] NAME="CentOS Linux"
[2025-06-04 12:55:52] VERSION="7 (Core)"
[2025-06-04 12:55:52] ID="centos"
[2025-06-04 12:55:52] ID_LIKE="rhel fedora"
[2025-06-04 12:55:52] VERSION_ID="7"
[2025-06-04 12:55:52] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-06-04 12:55:52] ANSI_COLOR="0;31"
[2025-06-04 12:55:52] CPE_NAME="cpe:/o:centos:centos:7"
[2025-06-04 12:55:52] HOME_URL="https://www.centos.org/"
[2025-06-04 12:55:52] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-06-04 12:55:52] 
[2025-06-04 12:55:52] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-06-04 12:55:52] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-06-04 12:55:52] REDHAT_SUPPORT_PRODUCT="centos"
[2025-06-04 12:55:52] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-06-04 12:55:52] 
[2025-06-04 12:55:52] 2025-06-04 16:55:34,122 | INFO     | **************************************
[2025-06-04 12:55:52] 2025-06-04 16:55:34,625 | INFO     | executing command: df -mP /tmp/boinchome/slots/0
[2025-06-04 12:55:52] 2025-06-04 16:55:34,649 | INFO     | sufficient remaining disk space (56459526144 B)
[2025-06-04 12:55:52] 2025-06-04 16:55:34,650 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-06-04 12:55:52] 2025-06-04 16:55:34,650 | INFO     | current server update state: UPDATING_FINAL
[2025-06-04 12:55:52] 2025-06-04 16:55:34,650 | INFO     | update_server=False
[2025-06-04 12:55:52] 2025-06-04 16:55:34,650 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-06-04 12:55:52] 2025-06-04 16:55:34,650 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-06-04 12:55:52] 2025-06-04 16:55:34,651 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-06-04 12:55:52] 2025-06-04 16:55:34,814 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-06-04 12:55:52] 2025-06-04 16:55:34,851 | INFO     | found 0 job(s) in 20 queues
[2025-06-04 12:55:52] 2025-06-04 16:55:34,851 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-06-04 12:55:52] 2025-06-04 16:55:34,852 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-06-04 12:55:52] 2025-06-04 16:55:35,081 | INFO     | all data control threads have been joined
[2025-06-04 12:55:52] 2025-06-04 16:55:35,228 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-06-04 12:55:52] 2025-06-04 16:55:35,228 | INFO     | aborting loop
[2025-06-04 12:55:52] 2025-06-04 16:55:35,655 | INFO     | [job] retrieve thread has finished
[2025-06-04 12:55:52] 2025-06-04 16:55:35,656 | INFO     | [job] queue monitor thread has finished
[2025-06-04 12:55:52] 2025-06-04 16:55:35,760 | INFO     | [job] validate thread has finished
[2025-06-04 12:55:52] 2025-06-04 16:55:36,003 | INFO     | [job] create_data_payload thread has finished
[2025-06-04 12:55:52] 2025-06-04 16:55:36,022 | INFO     | all payload control threads have been joined
[2025-06-04 12:55:52] 2025-06-04 16:55:36,028 | INFO     | [payload] validate_post thread has finished
[2025-06-04 12:55:52] 2025-06-04 16:55:36,041 | INFO     | [payload] validate_pre thread has finished
[2025-06-04 12:55:52] 2025-06-04 16:55:36,086 | INFO     | [data] control thread has finished
[2025-06-04 12:55:52] 2025-06-04 16:55:36,098 | INFO     | all job control threads have been joined
[2025-06-04 12:55:52] 2025-06-04 16:55:36,128 | INFO     | [payload] failed_post thread has finished
[2025-06-04 12:55:52] 2025-06-04 16:55:36,233 | INFO     | [job] job monitor thread has finished
[2025-06-04 12:55:52] 2025-06-04 16:55:36,815 | INFO     | [data] copytool_out thread has finished
[2025-06-04 12:55:52] 2025-06-04 16:55:36,863 | INFO     | [payload] execute_payloads thread has finished
[2025-06-04 12:55:52] 2025-06-04 16:55:36,992 | INFO     | [data] copytool_in thread has finished
[2025-06-04 12:55:52] 2025-06-04 16:55:37,027 | INFO     | [payload] control thread has finished
[2025-06-04 12:55:52] 2025-06-04 16:55:37,104 | INFO     | [job] control thread has finished
[2025-06-04 12:55:52] 2025-06-04 16:55:38,657 | INFO     | [data] queue_monitor thread has finished
[2025-06-04 12:55:52] 2025-06-04 16:55:45,045 | INFO     | job.realtimelogging is not enabled
[2025-06-04 12:55:52] 2025-06-04 16:55:46,050 | INFO     | [payload] run_realtimelog thread has finished
[2025-06-04 12:55:52] 2025-06-04 16:55:46,847 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140197677344576)>', '<ExcThread(monitor, started 140197245212416)>']
[2025-06-04 12:55:52] 2025-06-04 16:55:46,906 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-06-04 12:55:52] 2025-06-04 16:55:46,907 | INFO     | [monitor] control thread has ended
[2025-06-04 12:55:52] 2025-06-04 16:55:51,872 | INFO     | all workflow threads have been joined
[2025-06-04 12:55:52] 2025-06-04 16:55:51,872 | INFO     | end of generic workflow (traces error code: 0)
[2025-06-04 12:55:52] 2025-06-04 16:55:51,873 | INFO     | traces error code: 0
[2025-06-04 12:55:52] 2025-06-04 16:55:51,873 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-06-04 12:55:52] 2025-06-04 16:55:51,973 [wrapper] ==== pilot stdout END ====
[2025-06-04 12:55:52] 2025-06-04 16:55:51,976 [wrapper] ==== wrapper stdout RESUME ====
[2025-06-04 12:55:52] 2025-06-04 16:55:51,979 [wrapper] pilotpid: 253010
[2025-06-04 12:55:52] 2025-06-04 16:55:51,982 [wrapper] Pilot exit status: 0
[2025-06-04 12:55:52] 2025-06-04 16:55:51,993 [wrapper] pandaids: 6666805768
[2025-06-04 12:55:52] 2025-06-04 16:55:52,040 [wrapper] cleanup supervisor_pilot  88218 253011
[2025-06-04 12:55:52] 2025-06-04 16:55:52,043 [wrapper] Test setup, not cleaning
[2025-06-04 12:55:52] 2025-06-04 16:55:52,047 [wrapper] apfmon messages muted
[2025-06-04 12:55:52] 2025-06-04 16:55:52,050 [wrapper] ==== wrapper stdout END ====
[2025-06-04 12:55:52] 2025-06-04 16:55:52,053 [wrapper] ==== wrapper stderr END ====
[2025-06-04 12:55:52]  *** Error codes and diagnostics ***
[2025-06-04 12:55:52]     "exeErrorCode": 0,
[2025-06-04 12:55:52]     "exeErrorDiag": "",
[2025-06-04 12:55:52]     "pilotErrorCode": 0,
[2025-06-04 12:55:52]     "pilotErrorDiag": "",
[2025-06-04 12:55:52]  *** Listing of results directory ***
[2025-06-04 12:55:52] total 419660
[2025-06-04 12:55:52] -rw-r--r-- 1 boincer umatlas    495897 May 27 02:07 pilot3.tar.gz
[2025-06-04 12:55:52] -rwx------ 1 boincer umatlas     37140 May 27 02:13 runpilot2-wrapper.sh
[2025-06-04 12:55:52] -rw-r--r-- 1 boincer umatlas      5111 May 27 02:13 queuedata.json
[2025-06-04 12:55:52] -rw-r--r-- 1 boincer umatlas       100 Jun  4 11:16 wrapper_26015_x86_64-pc-linux-gnu
[2025-06-04 12:55:52] -rwxr-xr-x 1 boincer umatlas      7986 Jun  4 11:16 run_atlas
[2025-06-04 12:55:52] -rw-r--r-- 1 boincer umatlas       105 Jun  4 11:16 job.xml
[2025-06-04 12:55:52] -rw-r--r-- 2 boincer umatlas 224319107 Jun  4 11:16 EVNT.44871834._002494.pool.root.1
[2025-06-04 12:55:52] -rw-r--r-- 2 boincer umatlas     15093 Jun  4 11:16 start_atlas.sh
[2025-06-04 12:55:52] drwxrwx--x 2 boincer umatlas      4096 Jun  4 11:16 shared
[2025-06-04 12:55:52] -rw-r--r-- 2 boincer umatlas    508875 Jun  4 11:16 input.tar.gz
[2025-06-04 12:55:52] -rw-r--r-- 1 boincer umatlas         0 Jun  4 11:16 boinc_lockfile
[2025-06-04 12:55:52] -rw-r--r-- 1 boincer umatlas      2558 Jun  4 11:16 pandaJob.out
[2025-06-04 12:55:52] -rw------- 1 boincer umatlas    987207 Jun  4 11:16 agis_schedconf.cvmfs.json
[2025-06-04 12:55:52] -rw------- 1 boincer umatlas   1598969 Jun  4 11:16 agis_ddmendpoints.agis.ALL.json
[2025-06-04 12:55:52] drwx------ 4 boincer umatlas      4096 Jun  4 11:16 pilot3
[2025-06-04 12:55:52] -rw------- 1 boincer umatlas        95 Jun  4 12:54 pilot_heartbeat.json
[2025-06-04 12:55:52] -rw------- 1 boincer umatlas 199770547 Jun  4 12:54 HITS.44871837._063242.pool.root.1
[2025-06-04 12:55:52] -rw-r--r-- 1 boincer umatlas       530 Jun  4 12:55 boinc_task_state.xml
[2025-06-04 12:55:52] -rw-r--r-- 1 boincer umatlas      6266 Jun  4 12:55 init_data.xml
[2025-06-04 12:55:52] -rw------- 1 boincer umatlas      1048 Jun  4 12:55 memory_monitor_summary.json
[2025-06-04 12:55:52] -rw------- 1 boincer umatlas    324211 Jun  4 12:55 log.44871837._063242.job.log.tgz.1
[2025-06-04 12:55:52] -rw------- 1 boincer umatlas      7747 Jun  4 12:55 heartbeat.json
[2025-06-04 12:55:52] -rw-r--r-- 1 boincer umatlas        27 Jun  4 12:55 wrapper_checkpoint.txt
[2025-06-04 12:55:52] -rw-r--r-- 1 boincer umatlas      8192 Jun  4 12:55 boinc_mmap_file
[2025-06-04 12:55:52] -rw------- 1 boincer umatlas      4425 Jun  4 12:55 pilotlog.txt
[2025-06-04 12:55:52] -rw------- 1 boincer umatlas    577097 Jun  4 12:55 log.44871837._063242.job.log.1
[2025-06-04 12:55:52] -rw------- 1 boincer umatlas       357 Jun  4 12:55 output.list
[2025-06-04 12:55:52] -rw-r--r-- 1 boincer umatlas       620 Jun  4 12:55 runtime_log
[2025-06-04 12:55:52] -rw------- 1 boincer umatlas    921600 Jun  4 12:55 result.tar.gz
[2025-06-04 12:55:52] -rw-r--r-- 1 boincer umatlas      8669 Jun  4 12:55 runtime_log.err
[2025-06-04 12:55:52] -rw------- 1 boincer umatlas       660 Jun  4 12:55 NwgMDm6j2d7n9Rq4apOajLDm4fhM0noT9bVof3QYDmlQRKDmah6iwm.diag
[2025-06-04 12:55:52] -rw-r--r-- 1 boincer umatlas     21101 Jun  4 12:55 stderr.txt
[2025-06-04 12:55:52] HITS file was successfully produced:
[2025-06-04 12:55:52] -rw------- 1 boincer umatlas 199770547 Jun  4 12:54 shared/HITS.pool.root.1
[2025-06-04 12:55:52]  *** Contents of shared directory: ***
[2025-06-04 12:55:52] total 415580
[2025-06-04 12:55:52] -rw-r--r-- 2 boincer umatlas 224319107 Jun  4 11:16 ATLAS.root_0
[2025-06-04 12:55:52] -rw-r--r-- 2 boincer umatlas     15093 Jun  4 11:16 start_atlas.sh
[2025-06-04 12:55:52] -rw-r--r-- 2 boincer umatlas    508875 Jun  4 11:16 input.tar.gz
[2025-06-04 12:55:52] -rw------- 1 boincer umatlas 199770547 Jun  4 12:54 HITS.pool.root.1
[2025-06-04 12:55:52] -rw------- 1 boincer umatlas    921600 Jun  4 12:55 result.tar.gz
12:55:53 (249424): run_atlas exited; CPU time 46573.835590
12:55:53 (249424): called boinc_finish(0)

</stderr_txt>
]]>

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