Stderr output

<core_client_version>8.1.0</core_client_version>
<![CDATA[
<stderr_txt>
11:11:04 (2881243): wrapper (7.7.26015): starting
11:11:04 (2881243): wrapper: running run_atlas (--nthreads 8)
[2025-06-04 11:11:04] Arguments: --nthreads 8
[2025-06-04 11:11:04] Threads: 8
[2025-06-04 11:11:04] Checking for CVMFS
[2025-06-04 11:11:04] Probing /cvmfs/atlas.cern.ch... OK
[2025-06-04 11:11:04] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-06-04 11:11:04] Running cvmfs_config stat atlas.cern.ch
[2025-06-04 11:11:04] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-06-04 11:11:04] 2.12.6.0 229055 810 73976 146783 2 187 2565404 40960001 1832 16776704 0 4702958 99.859 875536 60199 http://cvmfs-s1fnal.opensciencegrid.org:8000/cvmfs/atlas.cern.ch http://192.41.231.237:6081 1
[2025-06-04 11:11:04] CVMFS is ok
[2025-06-04 11:11:04] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-06-04 11:11:04] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2025-06-04 11:11:04] Further information can be found at the LHC@home message board.
[2025-06-04 11:11:04] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-06-04 11:11:04] Checking for apptainer binary...
[2025-06-04 11:11:04] Using apptainer found in PATH at /usr/bin/apptainer
[2025-06-04 11:11:04] Running /usr/bin/apptainer --version
[2025-06-04 11:11:04] apptainer version 1.4.1-1.el9
[2025-06-04 11:11:04] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-06-04 11:11:04] c6-5-7-4.aglt2.org
[2025-06-04 11:11:04] apptainer works
[2025-06-04 11:11:04] Set ATHENA_PROC_NUMBER=8
[2025-06-04 11:11:04] Set ATHENA_CORE_NUMBER=8
[2025-06-04 11:11:04] Starting ATLAS job with PandaID=6679814176
[2025-06-04 11:11:04] Running command: /usr/bin/apptainer exec -B /cvmfs,/tmp/boinchome/slots/0 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-06-04 12:08:25]  *** The last 200 lines of the pilot log: ***
[2025-06-04 12:08:25]  inputddms=['NDGF-T1_DATADISK', 'CERN-PROD_DATADISK']
[2025-06-04 12:08:25]  is_altstaged=None
[2025-06-04 12:08:25]  is_tar=False
[2025-06-04 12:08:25]  lfn=log.45006595._056756.job.log.tgz.1
[2025-06-04 12:08:25]  mtime=0
[2025-06-04 12:08:25]  protocol_id=None
[2025-06-04 12:08:25]  protocols=[{'endpoint': 'davs://dav.ndgf.org:443', 'flavour': 'WEBDAV', 'id': 331, 'path': '/atlas/disk/atlasdatadisk/rucio/'}]
[2025-06-04 12:08:25]  replicas=None
[2025-06-04 12:08:25]  scope=mc23_13p6TeV
[2025-06-04 12:08:25]  status=None
[2025-06-04 12:08:25]  status_code=0
[2025-06-04 12:08:25]  storage_token=
[2025-06-04 12:08:25]  surl=/tmp/boinchome/slots/0/PanDA_Pilot-6679814176/log.45006595._056756.job.log.tgz.1
[2025-06-04 12:08:25]  turl=davs://dav.ndgf.org:443/atlas/disk/atlasdatadisk/rucio/mc23_13p6TeV/92/9b/log.45006595._056756.job.log.tgz.1
[2025-06-04 12:08:25]  workdir=None
[2025-06-04 12:08:25] ]
[2025-06-04 12:08:25] 2025-06-04 16:08:01,567 | INFO     | transferring file log.45006595._056756.job.log.tgz.1 from /tmp/boinchome/slots/0/PanDA_Pilot-6679814176/log.45006595._056756.job.log.tgz.1 to /tmp/boinchome/slots/
[2025-06-04 12:08:25] 2025-06-04 16:08:01,568 | INFO     | executing command: /usr/bin/env mv /tmp/boinchome/slots/0/PanDA_Pilot-6679814176/log.45006595._056756.job.log.tgz.1 /tmp/boinchome/slots/0/log.45006595._056756.job
[2025-06-04 12:08:25] 2025-06-04 16:08:01,578 | INFO     | adding to output.list: log.45006595._056756.job.log.tgz.1 davs://dav.ndgf.org:443/atlas/disk/atlasdatadisk/rucio/mc23_13p6TeV/92/9b/log.45006595._056756.job.log.tg
[2025-06-04 12:08:25] 2025-06-04 16:08:01,579 | INFO     | alt stage-out settings: ['pl', 'write_lan', 'w', 'default'], allow_altstageout=False, remain_files=0, has_altstorage=True
[2025-06-04 12:08:25] 2025-06-04 16:08:01,579 | INFO     | summary of transferred files:
[2025-06-04 12:08:25] 2025-06-04 16:08:01,579 | INFO     |  -- lfn=log.45006595._056756.job.log.tgz.1, status_code=0, status=transferred
[2025-06-04 12:08:25] 2025-06-04 16:08:01,579 | INFO     | stage-out finished correctly
[2025-06-04 12:08:25] 2025-06-04 16:08:01,697 | INFO     | PID=2885115 has CPU usage=4.3% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i P
[2025-06-04 12:08:25] 2025-06-04 16:08:01,698 | INFO     | .. there are 5 such processes running
[2025-06-04 12:08:25] 2025-06-04 16:08:01,986 | WARNING  | process 2896303 can no longer be monitored (due to stat problems) - aborting
[2025-06-04 12:08:25] 2025-06-04 16:08:01,987 | INFO     | using path: /tmp/boinchome/slots/0/PanDA_Pilot-6679814176/memory_monitor_summary.json (trf name=prmon)
[2025-06-04 12:08:25] 2025-06-04 16:08:02,091 | INFO     | number of running child processes to parent process 2896303: 1
[2025-06-04 12:08:25] 2025-06-04 16:08:02,091 | INFO     | maximum number of monitored processes: 6
[2025-06-04 12:08:25] 2025-06-04 16:08:02,138 | INFO     | finished stage-out for finished payload, adding job to finished_jobs queue
[2025-06-04 12:08:25] 2025-06-04 16:08:02,187 | INFO     | job 6679814176 has state=finished
[2025-06-04 12:08:25] 2025-06-04 16:08:02,187 | INFO     | preparing for final server update for job 6679814176 in state='finished'
[2025-06-04 12:08:25] 2025-06-04 16:08:02,187 | INFO     | this job has now completed (state=finished)
[2025-06-04 12:08:25] 2025-06-04 16:08:02,187 | INFO     | pilot will not update the server (heartbeat message will be written to file)
[2025-06-04 12:08:25] 2025-06-04 16:08:02,188 | INFO     | log transfer has been attempted: DONE
[2025-06-04 12:08:25] 2025-06-04 16:08:02,188 | INFO     | job 6679814176 has finished - writing final server update
[2025-06-04 12:08:25] 2025-06-04 16:08:02,188 | INFO     | total number of processed events: 400 (read)
[2025-06-04 12:08:25] 2025-06-04 16:08:02,202 | INFO     | executing command: lscpu
[2025-06-04 12:08:25] 2025-06-04 16:08:02,258 | INFO     | executing command: export ATLAS_LOCAL_ROOT_BASE=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase;source ${ATLAS_LOCAL_ROOT_BASE}/user/atlasLocalSetup.sh --quiet;lsetup
[2025-06-04 12:08:25] 2025-06-04 16:08:04,426 | INFO     | CPU arch script returned: x86-64-v4
[2025-06-04 12:08:25] 2025-06-04 16:08:04,426 | INFO     | using path: /tmp/boinchome/slots/0/PanDA_Pilot-6679814176/memory_monitor_summary.json (trf name=prmon)
[2025-06-04 12:08:25] 2025-06-04 16:08:04,426 | INFO     | extracted standard info from prmon json
[2025-06-04 12:08:25] 2025-06-04 16:08:04,427 | INFO     | extracted standard memory fields from prmon json
[2025-06-04 12:08:25] 2025-06-04 16:08:04,427 | WARNING  | GPU info not found in prmon json: 'gpu'
[2025-06-04 12:08:25] 2025-06-04 16:08:04,427 | WARNING  | format EVNTtoHITS has no such key: dbData
[2025-06-04 12:08:25] 2025-06-04 16:08:04,427 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2025-06-04 12:08:25] 2025-06-04 16:08:04,428 | INFO     | fitting pss+swap vs Time
[2025-06-04 12:08:25] 2025-06-04 16:08:04,428 | INFO     | sum of square deviations: 36465800.0
[2025-06-04 12:08:25] 2025-06-04 16:08:04,428 | INFO     | sum of deviations: 128702558.0
[2025-06-04 12:08:25] 2025-06-04 16:08:04,428 | INFO     | mean x: 1749051661.0
[2025-06-04 12:08:25] 2025-06-04 16:08:04,428 | INFO     | mean y: 2187112.5918367347
[2025-06-04 12:08:25] 2025-06-04 16:08:04,428 | INFO     | -- intersect: -6170923660.923315
[2025-06-04 12:08:25] 2025-06-04 16:08:04,428 | INFO     | intersect: -6170923660.923315
[2025-06-04 12:08:25] 2025-06-04 16:08:04,428 | INFO     | chi2: 0.012577713404400004
[2025-06-04 12:08:25] 2025-06-04 16:08:04,428 | INFO     | -- intersect: -6170923660.923315
[2025-06-04 12:08:25] 2025-06-04 16:08:04,429 | INFO     | current memory leak: 3.53 B/s (using 49 data points, chi2=0.01)
[2025-06-04 12:08:25] 2025-06-04 16:08:04,429 | INFO     | ..............................
[2025-06-04 12:08:25] 2025-06-04 16:08:04,429 | INFO     | . Timing measurements:
[2025-06-04 12:08:25] 2025-06-04 16:08:04,429 | INFO     | . get job = 0 s
[2025-06-04 12:08:25] 2025-06-04 16:08:04,429 | INFO     | . initial setup = 2 s
[2025-06-04 12:08:25] 2025-06-04 16:08:04,429 | INFO     | . payload setup = 4 s
[2025-06-04 12:08:25] 2025-06-04 16:08:04,429 | INFO     | . stage-in = 0 s
[2025-06-04 12:08:25] 2025-06-04 16:08:04,429 | INFO     | . payload execution = 3388 s
[2025-06-04 12:08:25] 2025-06-04 16:08:04,429 | INFO     | . stage-out = 0 s
[2025-06-04 12:08:25] 2025-06-04 16:08:04,429 | INFO     | . log creation = 0 s
[2025-06-04 12:08:25] 2025-06-04 16:08:04,429 | INFO     | ..............................
[2025-06-04 12:08:25] 2025-06-04 16:08:04,475 | INFO     | 
[2025-06-04 12:08:25] 2025-06-04 16:08:04,476 | INFO     | job summary report
[2025-06-04 12:08:25] 2025-06-04 16:08:04,476 | INFO     | --------------------------------------------------
[2025-06-04 12:08:25] 2025-06-04 16:08:04,476 | INFO     | PanDA job id: 6679814176
[2025-06-04 12:08:25] 2025-06-04 16:08:04,476 | INFO     | task id: 45006595
[2025-06-04 12:08:25] 2025-06-04 16:08:04,476 | INFO     | errors: (none)
[2025-06-04 12:08:25] 2025-06-04 16:08:04,476 | INFO     | status: LOG_TRANSFER = DONE 
[2025-06-04 12:08:25] 2025-06-04 16:08:04,476 | INFO     | pilot state: finished 
[2025-06-04 12:08:25] 2025-06-04 16:08:04,476 | INFO     | transexitcode: 0
[2025-06-04 12:08:25] 2025-06-04 16:08:04,476 | INFO     | exeerrorcode: 0
[2025-06-04 12:08:25] 2025-06-04 16:08:04,476 | INFO     | exeerrordiag: 
[2025-06-04 12:08:25] 2025-06-04 16:08:04,476 | INFO     | exitcode: 0
[2025-06-04 12:08:25] 2025-06-04 16:08:04,476 | INFO     | exitmsg: OK
[2025-06-04 12:08:25] 2025-06-04 16:08:04,476 | INFO     | cpuconsumptiontime: 25451 s
[2025-06-04 12:08:25] 2025-06-04 16:08:04,476 | INFO     | nevents: 400
[2025-06-04 12:08:25] 2025-06-04 16:08:04,476 | INFO     | neventsw: 0
[2025-06-04 12:08:25] 2025-06-04 16:08:04,476 | INFO     | pid: 2896303
[2025-06-04 12:08:25] 2025-06-04 16:08:04,476 | INFO     | pgrp: 2896303
[2025-06-04 12:08:25] 2025-06-04 16:08:04,476 | INFO     | corecount: 8
[2025-06-04 12:08:25] 2025-06-04 16:08:04,476 | INFO     | event service: False
[2025-06-04 12:08:25] 2025-06-04 16:08:04,476 | INFO     | sizes: {0: 2396463, 1: 2397319, 3: 2397525, 11: 2397553, 3396: 2423142, 3397: 2432267, 3399: 2432381}
[2025-06-04 12:08:25] 2025-06-04 16:08:04,476 | INFO     | --------------------------------------------------
[2025-06-04 12:08:25] 2025-06-04 16:08:04,476 | INFO     | 
[2025-06-04 12:08:25] 2025-06-04 16:08:04,476 | INFO     | executing command: ls -lF /tmp/boinchome/slots/0
[2025-06-04 12:08:25] 2025-06-04 16:08:04,488 | INFO     | queue jobs had 0 job(s) [purged]
[2025-06-04 12:08:25] 2025-06-04 16:08:04,488 | INFO     | queue payloads had 0 job(s) [purged]
[2025-06-04 12:08:25] 2025-06-04 16:08:04,488 | INFO     | queue data_in had 0 job(s) [purged]
[2025-06-04 12:08:25] 2025-06-04 16:08:04,488 | INFO     | queue data_out had 0 job(s) [purged]
[2025-06-04 12:08:25] 2025-06-04 16:08:04,488 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-06-04 12:08:25] 2025-06-04 16:08:04,488 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-06-04 12:08:25] 2025-06-04 16:08:04,488 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-06-04 12:08:25] 2025-06-04 16:08:04,488 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-06-04 12:08:25] 2025-06-04 16:08:04,488 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-06-04 12:08:25] 2025-06-04 16:08:04,488 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-06-04 12:08:25] 2025-06-04 16:08:04,488 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-06-04 12:08:25] 2025-06-04 16:08:04,488 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-06-04 12:08:25] 2025-06-04 16:08:04,488 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-06-04 12:08:25] 2025-06-04 16:08:04,488 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-06-04 12:08:25] 2025-06-04 16:08:04,488 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-06-04 12:08:25] 2025-06-04 16:08:04,489 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-06-04 12:08:25] 2025-06-04 16:08:04,489 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-06-04 12:08:25] 2025-06-04 16:08:04,489 | INFO     | queue completed_jobids has 1 job(s)
[2025-06-04 12:08:25] 2025-06-04 16:08:04,489 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-06-04 12:08:25] 2025-06-04 16:08:04,489 | INFO     | queue messages had 0 job(s) [purged]
[2025-06-04 12:08:25] 2025-06-04 16:08:04,489 | INFO     | job 6679814176 has completed (purged errors)
[2025-06-04 12:08:25] 2025-06-04 16:08:04,489 | INFO     | overall cleanup function is called
[2025-06-04 12:08:25] 2025-06-04 16:08:05,496 | INFO     | --- collectZombieJob: --- 10, [2896303]
[2025-06-04 12:08:25] 2025-06-04 16:08:05,496 | INFO     | zombie collector waiting for pid 2896303
[2025-06-04 12:08:25] 2025-06-04 16:08:05,496 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-06-04 12:08:25] 2025-06-04 16:08:05,496 | INFO     | collected zombie processes
[2025-06-04 12:08:25] 2025-06-04 16:08:05,496 | INFO     | will attempt to kill all subprocesses of pid=2896303
[2025-06-04 12:08:25] 2025-06-04 16:08:05,599 | INFO     | process IDs to be killed: [2896303] (in reverse order)
[2025-06-04 12:08:25] 2025-06-04 16:08:05,638 | WARNING  | found no corresponding commands to process id(s)
[2025-06-04 12:08:25] 2025-06-04 16:08:05,639 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-06-04 12:08:25] 2025-06-04 16:08:05,643 | INFO     | did not find any defunct processes belonging to 2896303
[2025-06-04 12:08:25] 2025-06-04 16:08:05,646 | INFO     | did not find any defunct processes belonging to 2896303
[2025-06-04 12:08:25] 2025-06-04 16:08:05,646 | INFO     | ready for new job
[2025-06-04 12:08:25] 2025-06-04 16:08:05,646 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-06-04 12:08:25] 2025-06-04 16:08:05,648 | INFO     | **************************************
[2025-06-04 12:08:25] 2025-06-04 16:08:05,648 | INFO     | ***  PanDA Pilot version 3.10.2.2  ***
[2025-06-04 12:08:25] 2025-06-04 16:08:05,648 | INFO     | **************************************
[2025-06-04 12:08:25] 2025-06-04 16:08:05,648 | INFO     | 
[2025-06-04 12:08:25] 2025-06-04 16:08:05,661 | INFO     | architecture information:
[2025-06-04 12:08:25] 2025-06-04 16:08:05,662 | INFO     | executing command: cat /etc/os-release
[2025-06-04 12:08:25] 2025-06-04 16:08:05,670 | INFO     | cat /etc/os-release:
[2025-06-04 12:08:25] NAME="CentOS Linux"
[2025-06-04 12:08:25] VERSION="7 (Core)"
[2025-06-04 12:08:25] ID="centos"
[2025-06-04 12:08:25] ID_LIKE="rhel fedora"
[2025-06-04 12:08:25] VERSION_ID="7"
[2025-06-04 12:08:25] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-06-04 12:08:25] ANSI_COLOR="0;31"
[2025-06-04 12:08:25] CPE_NAME="cpe:/o:centos:centos:7"
[2025-06-04 12:08:25] HOME_URL="https://www.centos.org/"
[2025-06-04 12:08:25] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-06-04 12:08:25] 
[2025-06-04 12:08:25] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-06-04 12:08:25] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-06-04 12:08:25] REDHAT_SUPPORT_PRODUCT="centos"
[2025-06-04 12:08:25] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-06-04 12:08:25] 
[2025-06-04 12:08:25] 2025-06-04 16:08:05,670 | INFO     | **************************************
[2025-06-04 12:08:25] 2025-06-04 16:08:06,173 | INFO     | executing command: df -mP /tmp/boinchome/slots/0
[2025-06-04 12:08:25] 2025-06-04 16:08:06,181 | INFO     | sufficient remaining disk space (73053241344 B)
[2025-06-04 12:08:25] 2025-06-04 16:08:06,182 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-06-04 12:08:25] 2025-06-04 16:08:06,182 | INFO     | current server update state: UPDATING_FINAL
[2025-06-04 12:08:25] 2025-06-04 16:08:06,182 | INFO     | update_server=False
[2025-06-04 12:08:25] 2025-06-04 16:08:06,182 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-06-04 12:08:25] 2025-06-04 16:08:06,182 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-06-04 12:08:25] 2025-06-04 16:08:06,182 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-06-04 12:08:25] 2025-06-04 16:08:06,182 | WARNING  | aborting monitor loop since graceful_stop has been set (timing out remaining threads)
[2025-06-04 12:08:25] 2025-06-04 16:08:06,183 | INFO     | aborting loop
[2025-06-04 12:08:25] 2025-06-04 16:08:06,183 | INFO     | found 0 job(s) in 20 queues
[2025-06-04 12:08:25] 2025-06-04 16:08:06,183 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-06-04 12:08:25] 2025-06-04 16:08:06,183 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-06-04 12:08:25] 2025-06-04 16:08:06,284 | INFO     | all job control threads have been joined
[2025-06-04 12:08:25] 2025-06-04 16:08:06,592 | INFO     | all data control threads have been joined
[2025-06-04 12:08:25] 2025-06-04 16:08:07,132 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-06-04 12:08:25] 2025-06-04 16:08:07,187 | INFO     | [job] retrieve thread has finished
[2025-06-04 12:08:25] 2025-06-04 16:08:07,188 | INFO     | [job] queue monitor thread has finished
[2025-06-04 12:08:25] 2025-06-04 16:08:07,188 | INFO     | [job] job monitor thread has finished
[2025-06-04 12:08:25] 2025-06-04 16:08:07,289 | INFO     | [job] control thread has finished
[2025-06-04 12:08:25] 2025-06-04 16:08:07,361 | INFO     | all payload control threads have been joined
[2025-06-04 12:08:25] 2025-06-04 16:08:07,598 | INFO     | [data] control thread has finished
[2025-06-04 12:08:25] 2025-06-04 16:08:07,621 | INFO     | [data] copytool_in thread has finished
[2025-06-04 12:08:25] 2025-06-04 16:08:07,845 | INFO     | [job] validate thread has finished
[2025-06-04 12:08:25] 2025-06-04 16:08:07,968 | INFO     | [job] create_data_payload thread has finished
[2025-06-04 12:08:25] 2025-06-04 16:08:07,969 | INFO     | [payload] execute_payloads thread has finished
[2025-06-04 12:08:25] 2025-06-04 16:08:08,026 | INFO     | [payload] failed_post thread has finished
[2025-06-04 12:08:25] 2025-06-04 16:08:08,053 | INFO     | [payload] validate_pre thread has finished
[2025-06-04 12:08:25] 2025-06-04 16:08:08,192 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-06-04 12:08:25] 2025-06-04 16:08:08,366 | INFO     | [payload] control thread has finished
[2025-06-04 12:08:25] 2025-06-04 16:08:08,546 | INFO     | [payload] validate_post thread has finished
[2025-06-04 12:08:25] 2025-06-04 16:08:09,137 | INFO     | [data] copytool_out thread has finished
[2025-06-04 12:08:25] 2025-06-04 16:08:12,198 | INFO     | [data] queue_monitor thread has finished
[2025-06-04 12:08:25] 2025-06-04 16:08:16,628 | INFO     | job.realtimelogging is not enabled
[2025-06-04 12:08:25] 2025-06-04 16:08:17,633 | INFO     | [payload] run_realtimelog thread has finished
[2025-06-04 12:08:25] 2025-06-04 16:08:17,908 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 139830238508864)>', '<ExcThread(monitor, started 139829748680448)>']
[2025-06-04 12:08:25] 2025-06-04 16:08:18,239 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-06-04 12:08:25] 2025-06-04 16:08:18,239 | INFO     | [monitor] control thread has ended
[2025-06-04 12:08:25] 2025-06-04 16:08:22,925 | INFO     | all workflow threads have been joined
[2025-06-04 12:08:25] 2025-06-04 16:08:22,925 | INFO     | end of generic workflow (traces error code: 0)
[2025-06-04 12:08:25] 2025-06-04 16:08:22,925 | INFO     | traces error code: 0
[2025-06-04 12:08:25] 2025-06-04 16:08:22,925 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-06-04 12:08:25] 2025-06-04 16:08:23,010 [wrapper] ==== pilot stdout END ====
[2025-06-04 12:08:25] 2025-06-04 16:08:23,012 [wrapper] ==== wrapper stdout RESUME ====
[2025-06-04 12:08:25] 2025-06-04 16:08:23,013 [wrapper] pilotpid: 2885115
[2025-06-04 12:08:25] 2025-06-04 16:08:23,015 [wrapper] Pilot exit status: 0
[2025-06-04 12:08:25] 2025-06-04 16:08:23,021 [wrapper] pandaids: 6679814176
[2025-06-04 12:08:25] 2025-06-04 16:08:23,047 [wrapper] cleanup supervisor_pilot 3009947 2885116
[2025-06-04 12:08:25] 2025-06-04 16:08:23,048 [wrapper] Test setup, not cleaning
[2025-06-04 12:08:25] 2025-06-04 16:08:23,050 [wrapper] apfmon messages muted
[2025-06-04 12:08:25] 2025-06-04 16:08:23,051 [wrapper] ==== wrapper stdout END ====
[2025-06-04 12:08:25] 2025-06-04 16:08:23,053 [wrapper] ==== wrapper stderr END ====
[2025-06-04 12:08:25]  *** Error codes and diagnostics ***
[2025-06-04 12:08:25]     "exeErrorCode": 0,
[2025-06-04 12:08:25]     "exeErrorDiag": "",
[2025-06-04 12:08:25]     "pilotErrorCode": 0,
[2025-06-04 12:08:25]     "pilotErrorDiag": "",
[2025-06-04 12:08:25]  *** Listing of results directory ***
[2025-06-04 12:08:25] total 392108
[2025-06-04 12:08:25] -rw-r--r--. 1 boincer umatlas    495897 Jun  4 10:55 pilot3.tar.gz
[2025-06-04 12:08:25] -rw-r--r--. 1 boincer umatlas      5111 Jun  4 11:08 queuedata.json
[2025-06-04 12:08:25] -rwx------. 1 boincer umatlas     37140 Jun  4 11:10 runpilot2-wrapper.sh
[2025-06-04 12:08:25] -rw-r--r--. 1 boincer umatlas       100 Jun  4 11:11 wrapper_26015_x86_64-pc-linux-gnu
[2025-06-04 12:08:25] -rwxr-xr-x. 1 boincer umatlas      7986 Jun  4 11:11 run_atlas
[2025-06-04 12:08:25] -rw-r--r--. 1 boincer umatlas       105 Jun  4 11:11 job.xml
[2025-06-04 12:08:25] -rw-r--r--. 2 boincer umatlas 217880206 Jun  4 11:11 EVNT.45006593._002140.pool.root.1
[2025-06-04 12:08:25] -rw-r--r--. 2 boincer umatlas     15093 Jun  4 11:11 start_atlas.sh
[2025-06-04 12:08:25] drwxrwx--x. 2 boincer umatlas      4096 Jun  4 11:11 shared
[2025-06-04 12:08:25] -rw-r--r--. 2 boincer umatlas    508882 Jun  4 11:11 input.tar.gz
[2025-06-04 12:08:25] -rw-r--r--. 1 boincer umatlas         0 Jun  4 11:11 boinc_lockfile
[2025-06-04 12:08:25] -rw-r--r--. 1 boincer umatlas      2524 Jun  4 11:11 pandaJob.out
[2025-06-04 12:08:25] -rw-------. 1 boincer umatlas    987207 Jun  4 11:11 agis_schedconf.cvmfs.json
[2025-06-04 12:08:25] -rw-------. 1 boincer umatlas   1598969 Jun  4 11:11 agis_ddmendpoints.agis.ALL.json
[2025-06-04 12:08:25] drwx------. 4 boincer umatlas      4096 Jun  4 11:11 pilot3
[2025-06-04 12:08:25] -rw-r--r--. 1 boincer umatlas      6841 Jun  4 12:03 init_data.xml
[2025-06-04 12:08:25] -rw-------. 1 boincer umatlas 178506001 Jun  4 12:07 HITS.45006595._056756.pool.root.1
[2025-06-04 12:08:25] -rw-r--r--. 1 boincer umatlas       529 Jun  4 12:07 boinc_task_state.xml
[2025-06-04 12:08:25] -rw-------. 1 boincer umatlas        95 Jun  4 12:07 pilot_heartbeat.json
[2025-06-04 12:08:25] -rw-------. 1 boincer umatlas      1028 Jun  4 12:07 memory_monitor_summary.json
[2025-06-04 12:08:25] -rw-------. 1 boincer umatlas    292444 Jun  4 12:08 log.45006595._056756.job.log.tgz.1
[2025-06-04 12:08:25] -rw-------. 1 boincer umatlas      7699 Jun  4 12:08 heartbeat.json
[2025-06-04 12:08:25] -rw-------. 1 boincer umatlas      4548 Jun  4 12:08 pilotlog.txt
[2025-06-04 12:08:25] -rw-------. 1 boincer umatlas    352304 Jun  4 12:08 log.45006595._056756.job.log.1
[2025-06-04 12:08:25] -rw-------. 1 boincer umatlas       357 Jun  4 12:08 output.list
[2025-06-04 12:08:25] -rw-r--r--. 1 boincer umatlas       620 Jun  4 12:08 runtime_log
[2025-06-04 12:08:25] -rw-------. 1 boincer umatlas    665600 Jun  4 12:08 result.tar.gz
[2025-06-04 12:08:25] -rw-------. 1 boincer umatlas       649 Jun  4 12:08 z9vKDmLw4g7n9Rq4apOajLDm4fhM0noT9bVof3QYDmV3aKDmHXhsSo.diag
[2025-06-04 12:08:25] -rw-r--r--. 1 boincer umatlas      8659 Jun  4 12:08 runtime_log.err
[2025-06-04 12:08:25] -rw-r--r--. 1 boincer umatlas        27 Jun  4 12:08 wrapper_checkpoint.txt
[2025-06-04 12:08:25] -rw-r--r--. 1 boincer umatlas      8192 Jun  4 12:08 boinc_mmap_file
[2025-06-04 12:08:25] -rw-r--r--. 1 boincer umatlas     21417 Jun  4 12:08 stderr.txt
[2025-06-04 12:08:25] HITS file was successfully produced:
[2025-06-04 12:08:25] -rw-------. 1 boincer umatlas 178506001 Jun  4 12:07 shared/HITS.pool.root.1
[2025-06-04 12:08:25]  *** Contents of shared directory: ***
[2025-06-04 12:08:25] total 388276
[2025-06-04 12:08:25] -rw-r--r--. 2 boincer umatlas 217880206 Jun  4 11:11 ATLAS.root_0
[2025-06-04 12:08:25] -rw-r--r--. 2 boincer umatlas     15093 Jun  4 11:11 start_atlas.sh
[2025-06-04 12:08:25] -rw-r--r--. 2 boincer umatlas    508882 Jun  4 11:11 input.tar.gz
[2025-06-04 12:08:25] -rw-------. 1 boincer umatlas 178506001 Jun  4 12:07 HITS.pool.root.1
[2025-06-04 12:08:25] -rw-------. 1 boincer umatlas    665600 Jun  4 12:08 result.tar.gz
12:08:27 (2881243): run_atlas exited; CPU time 25506.663301
12:08:27 (2881243): called boinc_finish(0)

</stderr_txt>
]]>

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