Stderr output

<core_client_version>8.1.0</core_client_version>
<![CDATA[
<stderr_txt>
11:10:07 (943695): wrapper (7.7.26015): starting
11:10:07 (943695): wrapper: running run_atlas (--nthreads 8)
[2025-06-04 11:10:07] Arguments: --nthreads 8
[2025-06-04 11:10:07] Threads: 8
[2025-06-04 11:10:07] Checking for CVMFS
[2025-06-04 11:10:07] Probing /cvmfs/atlas.cern.ch... OK
[2025-06-04 11:10:07] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-06-04 11:10:07] Running cvmfs_config stat atlas.cern.ch
[2025-06-04 11:10:07] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-06-04 11:10:07] 2.12.6.0 10346 1492 157896 146783 1 547 18346835 32935937 9126 16776704 0 19057221 99.950 2288059 35477 http://cvmfs-s1fnal.opensciencegrid.org:8000/cvmfs/atlas.cern.ch http://192.41.231.237:6081 1
[2025-06-04 11:10:07] CVMFS is ok
[2025-06-04 11:10:07] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-06-04 11:10:07] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2025-06-04 11:10:07] Further information can be found at the LHC@home message board.
[2025-06-04 11:10:07] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-06-04 11:10:07] Checking for apptainer binary...
[2025-06-04 11:10:07] Using apptainer found in PATH at /usr/bin/apptainer
[2025-06-04 11:10:07] Running /usr/bin/apptainer --version
[2025-06-04 11:10:07] apptainer version 1.4.1-1.el9
[2025-06-04 11:10:07] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-06-04 11:10:07] c6-8-25-4.aglt2.org
[2025-06-04 11:10:07] apptainer works
[2025-06-04 11:10:07] Set ATHENA_PROC_NUMBER=8
[2025-06-04 11:10:07] Set ATHENA_CORE_NUMBER=8
[2025-06-04 11:10:07] Starting ATLAS job with PandaID=6666851146
[2025-06-04 11:10:07] Running command: /usr/bin/apptainer exec -B /cvmfs,/tmp/boinchome/slots/0 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-06-04 12:20:21]  *** The last 200 lines of the pilot log: ***
[2025-06-04 12:20:21]  inputddms=['NDGF-T1_DATADISK', 'CERN-PROD_DATADISK']
[2025-06-04 12:20:21]  is_altstaged=None
[2025-06-04 12:20:21]  is_tar=False
[2025-06-04 12:20:21]  lfn=log.44871837._065194.job.log.tgz.1
[2025-06-04 12:20:21]  mtime=0
[2025-06-04 12:20:21]  protocol_id=None
[2025-06-04 12:20:21]  protocols=[{'endpoint': 'davs://dav.ndgf.org:443', 'flavour': 'WEBDAV', 'id': 331, 'path': '/atlas/disk/atlasdatadisk/rucio/'}]
[2025-06-04 12:20:21]  replicas=None
[2025-06-04 12:20:21]  scope=mc23_13p6TeV
[2025-06-04 12:20:21]  status=None
[2025-06-04 12:20:21]  status_code=0
[2025-06-04 12:20:21]  storage_token=
[2025-06-04 12:20:21]  surl=/tmp/boinchome/slots/0/PanDA_Pilot-6666851146/log.44871837._065194.job.log.tgz.1
[2025-06-04 12:20:21]  turl=davs://dav.ndgf.org:443/atlas/disk/atlasdatadisk/rucio/mc23_13p6TeV/11/6f/log.44871837._065194.job.log.tgz.1
[2025-06-04 12:20:21]  workdir=None
[2025-06-04 12:20:21] ]
[2025-06-04 12:20:21] 2025-06-04 16:20:01,358 | INFO     | transferring file log.44871837._065194.job.log.tgz.1 from /tmp/boinchome/slots/0/PanDA_Pilot-6666851146/log.44871837._065194.job.log.tgz.1 to /tmp/boinchome/slots/
[2025-06-04 12:20:21] 2025-06-04 16:20:01,359 | INFO     | executing command: /usr/bin/env mv /tmp/boinchome/slots/0/PanDA_Pilot-6666851146/log.44871837._065194.job.log.tgz.1 /tmp/boinchome/slots/0/log.44871837._065194.job
[2025-06-04 12:20:21] 2025-06-04 16:20:01,371 | INFO     | adding to output.list: log.44871837._065194.job.log.tgz.1 davs://dav.ndgf.org:443/atlas/disk/atlasdatadisk/rucio/mc23_13p6TeV/11/6f/log.44871837._065194.job.log.tg
[2025-06-04 12:20:21] 2025-06-04 16:20:01,371 | INFO     | alt stage-out settings: ['pl', 'write_lan', 'w', 'default'], allow_altstageout=False, remain_files=0, has_altstorage=True
[2025-06-04 12:20:21] 2025-06-04 16:20:01,371 | INFO     | summary of transferred files:
[2025-06-04 12:20:21] 2025-06-04 16:20:01,371 | INFO     |  -- lfn=log.44871837._065194.job.log.tgz.1, status_code=0, status=transferred
[2025-06-04 12:20:21] 2025-06-04 16:20:01,371 | INFO     | stage-out finished correctly
[2025-06-04 12:20:21] 2025-06-04 16:20:02,685 | WARNING  | process 954656 can no longer be monitored (due to stat problems) - aborting
[2025-06-04 12:20:21] 2025-06-04 16:20:02,686 | INFO     | using path: /tmp/boinchome/slots/0/PanDA_Pilot-6666851146/memory_monitor_summary.json (trf name=prmon)
[2025-06-04 12:20:21] 2025-06-04 16:20:02,856 | INFO     | number of running child processes to parent process 954656: 1
[2025-06-04 12:20:21] 2025-06-04 16:20:02,857 | INFO     | maximum number of monitored processes: 6
[2025-06-04 12:20:21] 2025-06-04 16:20:04,831 | INFO     | finished stage-out for finished payload, adding job to finished_jobs queue
[2025-06-04 12:20:21] 2025-06-04 16:20:05,365 | INFO     | monitor loop #316: job 0:6666851146 is in state 'finished'
[2025-06-04 12:20:21] 2025-06-04 16:20:05,365 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-06-04 12:20:21] 2025-06-04 16:20:06,851 | INFO     | job 6666851146 has state=finished
[2025-06-04 12:20:21] 2025-06-04 16:20:06,851 | INFO     | preparing for final server update for job 6666851146 in state='finished'
[2025-06-04 12:20:21] 2025-06-04 16:20:06,851 | INFO     | this job has now completed (state=finished)
[2025-06-04 12:20:21] 2025-06-04 16:20:06,851 | INFO     | pilot will not update the server (heartbeat message will be written to file)
[2025-06-04 12:20:21] 2025-06-04 16:20:06,851 | INFO     | log transfer has been attempted: DONE
[2025-06-04 12:20:21] 2025-06-04 16:20:06,851 | INFO     | job 6666851146 has finished - writing final server update
[2025-06-04 12:20:21] 2025-06-04 16:20:06,851 | INFO     | total number of processed events: 400 (read)
[2025-06-04 12:20:21] 2025-06-04 16:20:06,867 | INFO     | executing command: lscpu
[2025-06-04 12:20:21] 2025-06-04 16:20:06,930 | INFO     | executing command: export ATLAS_LOCAL_ROOT_BASE=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase;source ${ATLAS_LOCAL_ROOT_BASE}/user/atlasLocalSetup.sh --quiet;lsetup
[2025-06-04 12:20:21] 2025-06-04 16:20:07,868 | INFO     | monitor loop #317: job 0:6666851146 is in state 'finished'
[2025-06-04 12:20:21] 2025-06-04 16:20:07,868 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-06-04 12:20:21] 2025-06-04 16:20:09,045 | INFO     | CPU arch script returned: x86-64-v4
[2025-06-04 12:20:21] 2025-06-04 16:20:09,046 | INFO     | using path: /tmp/boinchome/slots/0/PanDA_Pilot-6666851146/memory_monitor_summary.json (trf name=prmon)
[2025-06-04 12:20:21] 2025-06-04 16:20:09,046 | INFO     | extracted standard info from prmon json
[2025-06-04 12:20:21] 2025-06-04 16:20:09,046 | INFO     | extracted standard memory fields from prmon json
[2025-06-04 12:20:21] 2025-06-04 16:20:09,047 | WARNING  | GPU info not found in prmon json: 'gpu'
[2025-06-04 12:20:21] 2025-06-04 16:20:09,047 | WARNING  | format EVNTtoHITS has no such key: dbData
[2025-06-04 12:20:21] 2025-06-04 16:20:09,047 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2025-06-04 12:20:21] 2025-06-04 16:20:09,048 | INFO     | fitting pss+swap vs Time
[2025-06-04 12:20:21] 2025-06-04 16:20:09,048 | INFO     | sum of square deviations: 73882315.5
[2025-06-04 12:20:21] 2025-06-04 16:20:09,048 | INFO     | sum of deviations: 1461155082.0
[2025-06-04 12:20:21] 2025-06-04 16:20:09,048 | INFO     | mean x: 1749052001.5
[2025-06-04 12:20:21] 2025-06-04 16:20:09,048 | INFO     | mean y: 2231215.419354839
[2025-06-04 12:20:21] 2025-06-04 16:20:09,048 | INFO     | -- intersect: -34588403950.50201
[2025-06-04 12:20:21] 2025-06-04 16:20:09,048 | INFO     | intersect: -34588403950.50201
[2025-06-04 12:20:21] 2025-06-04 16:20:09,049 | INFO     | chi2: 0.015239941957755972
[2025-06-04 12:20:21] 2025-06-04 16:20:09,049 | INFO     | -- intersect: -34588403950.50201
[2025-06-04 12:20:21] 2025-06-04 16:20:09,049 | INFO     | current memory leak: 19.78 B/s (using 62 data points, chi2=0.02)
[2025-06-04 12:20:21] 2025-06-04 16:20:09,049 | INFO     | ..............................
[2025-06-04 12:20:21] 2025-06-04 16:20:09,049 | INFO     | . Timing measurements:
[2025-06-04 12:20:21] 2025-06-04 16:20:09,049 | INFO     | . get job = 0 s
[2025-06-04 12:20:21] 2025-06-04 16:20:09,049 | INFO     | . initial setup = 2 s
[2025-06-04 12:20:21] 2025-06-04 16:20:09,049 | INFO     | . payload setup = 4 s
[2025-06-04 12:20:21] 2025-06-04 16:20:09,049 | INFO     | . stage-in = 0 s
[2025-06-04 12:20:21] 2025-06-04 16:20:09,049 | INFO     | . payload execution = 4164 s
[2025-06-04 12:20:21] 2025-06-04 16:20:09,049 | INFO     | . stage-out = 0 s
[2025-06-04 12:20:21] 2025-06-04 16:20:09,049 | INFO     | . log creation = 0 s
[2025-06-04 12:20:21] 2025-06-04 16:20:09,049 | INFO     | ..............................
[2025-06-04 12:20:21] 2025-06-04 16:20:09,097 | INFO     | 
[2025-06-04 12:20:21] 2025-06-04 16:20:09,098 | INFO     | job summary report
[2025-06-04 12:20:21] 2025-06-04 16:20:09,098 | INFO     | --------------------------------------------------
[2025-06-04 12:20:21] 2025-06-04 16:20:09,098 | INFO     | PanDA job id: 6666851146
[2025-06-04 12:20:21] 2025-06-04 16:20:09,098 | INFO     | task id: 44871837
[2025-06-04 12:20:21] 2025-06-04 16:20:09,098 | INFO     | errors: (none)
[2025-06-04 12:20:21] 2025-06-04 16:20:09,098 | INFO     | status: LOG_TRANSFER = DONE 
[2025-06-04 12:20:21] 2025-06-04 16:20:09,098 | INFO     | pilot state: finished 
[2025-06-04 12:20:21] 2025-06-04 16:20:09,098 | INFO     | transexitcode: 0
[2025-06-04 12:20:21] 2025-06-04 16:20:09,098 | INFO     | exeerrorcode: 0
[2025-06-04 12:20:21] 2025-06-04 16:20:09,098 | INFO     | exeerrordiag: 
[2025-06-04 12:20:21] 2025-06-04 16:20:09,098 | INFO     | exitcode: 0
[2025-06-04 12:20:21] 2025-06-04 16:20:09,098 | INFO     | exitmsg: OK
[2025-06-04 12:20:21] 2025-06-04 16:20:09,099 | INFO     | cpuconsumptiontime: 31262 s
[2025-06-04 12:20:21] 2025-06-04 16:20:09,099 | INFO     | nevents: 400
[2025-06-04 12:20:21] 2025-06-04 16:20:09,099 | INFO     | neventsw: 0
[2025-06-04 12:20:21] 2025-06-04 16:20:09,099 | INFO     | pid: 954656
[2025-06-04 12:20:21] 2025-06-04 16:20:09,099 | INFO     | pgrp: 954656
[2025-06-04 12:20:21] 2025-06-04 16:20:09,099 | INFO     | corecount: 8
[2025-06-04 12:20:21] 2025-06-04 16:20:09,099 | INFO     | event service: False
[2025-06-04 12:20:21] 2025-06-04 16:20:09,099 | INFO     | sizes: {0: 2397221, 1: 2397420, 3: 2397626, 11: 2397654, 4172: 2423541, 4173: 2432482, 4176: 2432666, 4180: 2432836}
[2025-06-04 12:20:21] 2025-06-04 16:20:09,099 | INFO     | --------------------------------------------------
[2025-06-04 12:20:21] 2025-06-04 16:20:09,099 | INFO     | 
[2025-06-04 12:20:21] 2025-06-04 16:20:09,099 | INFO     | executing command: ls -lF /tmp/boinchome/slots/0
[2025-06-04 12:20:21] 2025-06-04 16:20:09,112 | INFO     | queue jobs had 0 job(s) [purged]
[2025-06-04 12:20:21] 2025-06-04 16:20:09,112 | INFO     | queue payloads had 0 job(s) [purged]
[2025-06-04 12:20:21] 2025-06-04 16:20:09,112 | INFO     | queue data_in had 0 job(s) [purged]
[2025-06-04 12:20:21] 2025-06-04 16:20:09,113 | INFO     | queue data_out had 0 job(s) [purged]
[2025-06-04 12:20:21] 2025-06-04 16:20:09,113 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-06-04 12:20:21] 2025-06-04 16:20:09,113 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-06-04 12:20:21] 2025-06-04 16:20:09,113 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-06-04 12:20:21] 2025-06-04 16:20:09,113 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-06-04 12:20:21] 2025-06-04 16:20:09,113 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-06-04 12:20:21] 2025-06-04 16:20:09,113 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-06-04 12:20:21] 2025-06-04 16:20:09,113 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-06-04 12:20:21] 2025-06-04 16:20:09,113 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-06-04 12:20:21] 2025-06-04 16:20:09,113 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-06-04 12:20:21] 2025-06-04 16:20:09,113 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-06-04 12:20:21] 2025-06-04 16:20:09,114 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-06-04 12:20:21] 2025-06-04 16:20:09,114 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-06-04 12:20:21] 2025-06-04 16:20:09,114 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-06-04 12:20:21] 2025-06-04 16:20:09,114 | INFO     | queue completed_jobids has 1 job(s)
[2025-06-04 12:20:21] 2025-06-04 16:20:09,114 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-06-04 12:20:21] 2025-06-04 16:20:09,114 | INFO     | queue messages had 0 job(s) [purged]
[2025-06-04 12:20:21] 2025-06-04 16:20:09,114 | INFO     | job 6666851146 has completed (purged errors)
[2025-06-04 12:20:21] 2025-06-04 16:20:09,114 | INFO     | overall cleanup function is called
[2025-06-04 12:20:21] 2025-06-04 16:20:10,121 | INFO     | --- collectZombieJob: --- 10, [954656]
[2025-06-04 12:20:21] 2025-06-04 16:20:10,122 | INFO     | zombie collector waiting for pid 954656
[2025-06-04 12:20:21] 2025-06-04 16:20:10,122 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-06-04 12:20:21] 2025-06-04 16:20:10,122 | INFO     | collected zombie processes
[2025-06-04 12:20:21] 2025-06-04 16:20:10,122 | INFO     | will attempt to kill all subprocesses of pid=954656
[2025-06-04 12:20:21] 2025-06-04 16:20:10,283 | INFO     | process IDs to be killed: [954656] (in reverse order)
[2025-06-04 12:20:21] 2025-06-04 16:20:10,335 | WARNING  | found no corresponding commands to process id(s)
[2025-06-04 12:20:21] 2025-06-04 16:20:10,335 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-06-04 12:20:21] 2025-06-04 16:20:10,342 | INFO     | did not find any defunct processes belonging to 954656
[2025-06-04 12:20:21] 2025-06-04 16:20:10,349 | INFO     | did not find any defunct processes belonging to 954656
[2025-06-04 12:20:21] 2025-06-04 16:20:10,349 | INFO     | ready for new job
[2025-06-04 12:20:21] 2025-06-04 16:20:10,350 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-06-04 12:20:21] 2025-06-04 16:20:10,350 | INFO     | **************************************
[2025-06-04 12:20:21] 2025-06-04 16:20:10,351 | INFO     | ***  PanDA Pilot version 3.10.2.2  ***
[2025-06-04 12:20:21] 2025-06-04 16:20:10,351 | INFO     | **************************************
[2025-06-04 12:20:21] 2025-06-04 16:20:10,351 | INFO     | 
[2025-06-04 12:20:21] 2025-06-04 16:20:10,365 | INFO     | architecture information:
[2025-06-04 12:20:21] 2025-06-04 16:20:10,365 | INFO     | executing command: cat /etc/os-release
[2025-06-04 12:20:21] 2025-06-04 16:20:10,375 | INFO     | cat /etc/os-release:
[2025-06-04 12:20:21] NAME="CentOS Linux"
[2025-06-04 12:20:21] VERSION="7 (Core)"
[2025-06-04 12:20:21] ID="centos"
[2025-06-04 12:20:21] ID_LIKE="rhel fedora"
[2025-06-04 12:20:21] VERSION_ID="7"
[2025-06-04 12:20:21] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-06-04 12:20:21] ANSI_COLOR="0;31"
[2025-06-04 12:20:21] CPE_NAME="cpe:/o:centos:centos:7"
[2025-06-04 12:20:21] HOME_URL="https://www.centos.org/"
[2025-06-04 12:20:21] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-06-04 12:20:21] 
[2025-06-04 12:20:21] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-06-04 12:20:21] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-06-04 12:20:21] REDHAT_SUPPORT_PRODUCT="centos"
[2025-06-04 12:20:21] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-06-04 12:20:21] 
[2025-06-04 12:20:21] 2025-06-04 16:20:10,375 | INFO     | **************************************
[2025-06-04 12:20:21] 2025-06-04 16:20:10,878 | INFO     | executing command: df -mP /tmp/boinchome/slots/0
[2025-06-04 12:20:21] 2025-06-04 16:20:10,888 | INFO     | sufficient remaining disk space (76550242304 B)
[2025-06-04 12:20:21] 2025-06-04 16:20:10,889 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-06-04 12:20:21] 2025-06-04 16:20:10,889 | INFO     | current server update state: UPDATING_FINAL
[2025-06-04 12:20:21] 2025-06-04 16:20:10,889 | INFO     | update_server=False
[2025-06-04 12:20:21] 2025-06-04 16:20:10,889 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-06-04 12:20:21] 2025-06-04 16:20:10,889 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-06-04 12:20:21] 2025-06-04 16:20:10,889 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-06-04 12:20:21] 2025-06-04 16:20:11,010 | INFO     | found 0 job(s) in 20 queues
[2025-06-04 12:20:21] 2025-06-04 16:20:11,010 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-06-04 12:20:21] 2025-06-04 16:20:11,010 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-06-04 12:20:21] 2025-06-04 16:20:11,192 | INFO     | all payload control threads have been joined
[2025-06-04 12:20:21] 2025-06-04 16:20:11,193 | INFO     | all data control threads have been joined
[2025-06-04 12:20:21] 2025-06-04 16:20:11,373 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-06-04 12:20:21] 2025-06-04 16:20:11,373 | INFO     | aborting loop
[2025-06-04 12:20:21] 2025-06-04 16:20:11,430 | INFO     | all job control threads have been joined
[2025-06-04 12:20:21] 2025-06-04 16:20:11,892 | INFO     | [job] retrieve thread has finished
[2025-06-04 12:20:21] 2025-06-04 16:20:11,895 | INFO     | [job] queue monitor thread has finished
[2025-06-04 12:20:21] 2025-06-04 16:20:11,932 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-06-04 12:20:21] 2025-06-04 16:20:12,197 | INFO     | [payload] control thread has finished
[2025-06-04 12:20:21] 2025-06-04 16:20:12,198 | INFO     | [data] control thread has finished
[2025-06-04 12:20:21] 2025-06-04 16:20:12,217 | INFO     | [payload] execute_payloads thread has finished
[2025-06-04 12:20:21] 2025-06-04 16:20:12,284 | INFO     | [payload] failed_post thread has finished
[2025-06-04 12:20:21] 2025-06-04 16:20:12,378 | INFO     | [job] job monitor thread has finished
[2025-06-04 12:20:21] 2025-06-04 16:20:12,435 | INFO     | [job] control thread has finished
[2025-06-04 12:20:21] 2025-06-04 16:20:12,564 | INFO     | [payload] run_realtimelog thread has finished
[2025-06-04 12:20:21] 2025-06-04 16:20:12,592 | INFO     | [data] copytool_in thread has finished
[2025-06-04 12:20:21] 2025-06-04 16:20:12,948 | INFO     | [job] validate thread has finished
[2025-06-04 12:20:21] 2025-06-04 16:20:13,069 | INFO     | [payload] validate_post thread has finished
[2025-06-04 12:20:21] 2025-06-04 16:20:13,100 | INFO     | [job] create_data_payload thread has finished
[2025-06-04 12:20:21] 2025-06-04 16:20:13,158 | INFO     | [payload] validate_pre thread has finished
[2025-06-04 12:20:21] 2025-06-04 16:20:13,937 | INFO     | [data] copytool_out thread has finished
[2025-06-04 12:20:21] 2025-06-04 16:20:14,893 | INFO     | [data] queue_monitor thread has finished
[2025-06-04 12:20:21] 2025-06-04 16:20:16,113 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 139858501015360)>', '<ExcThread(monitor, started 139858001512192)>']
[2025-06-04 12:20:21] 2025-06-04 16:20:17,040 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-06-04 12:20:21] 2025-06-04 16:20:17,040 | INFO     | [monitor] control thread has ended
[2025-06-04 12:20:21] 2025-06-04 16:20:21,138 | INFO     | all workflow threads have been joined
[2025-06-04 12:20:21] 2025-06-04 16:20:21,138 | INFO     | end of generic workflow (traces error code: 0)
[2025-06-04 12:20:21] 2025-06-04 16:20:21,139 | INFO     | traces error code: 0
[2025-06-04 12:20:21] 2025-06-04 16:20:21,139 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-06-04 12:20:21] 2025-06-04 16:20:21,245 [wrapper] ==== pilot stdout END ====
[2025-06-04 12:20:21] 2025-06-04 16:20:21,246 [wrapper] ==== wrapper stdout RESUME ====
[2025-06-04 12:20:21] 2025-06-04 16:20:21,247 [wrapper] pilotpid: 947642
[2025-06-04 12:20:21] 2025-06-04 16:20:21,249 [wrapper] Pilot exit status: 0
[2025-06-04 12:20:21] 2025-06-04 16:20:21,254 [wrapper] pandaids: 6666851146
[2025-06-04 12:20:21] 2025-06-04 16:20:21,290 [wrapper] cleanup supervisor_pilot 1122668 947643
[2025-06-04 12:20:21] 2025-06-04 16:20:21,292 [wrapper] Test setup, not cleaning
[2025-06-04 12:20:21] 2025-06-04 16:20:21,293 [wrapper] apfmon messages muted
[2025-06-04 12:20:21] 2025-06-04 16:20:21,295 [wrapper] ==== wrapper stdout END ====
[2025-06-04 12:20:21] 2025-06-04 16:20:21,296 [wrapper] ==== wrapper stderr END ====
[2025-06-04 12:20:21]  *** Error codes and diagnostics ***
[2025-06-04 12:20:21]     "exeErrorCode": 0,
[2025-06-04 12:20:21]     "exeErrorDiag": "",
[2025-06-04 12:20:21]     "pilotErrorCode": 0,
[2025-06-04 12:20:21]     "pilotErrorDiag": "",
[2025-06-04 12:20:21]  *** Listing of results directory ***
[2025-06-04 12:20:21] total 417744
[2025-06-04 12:20:21] -rw-r--r--. 1 boincer umatlas    495897 May 27 04:13 pilot3.tar.gz
[2025-06-04 12:20:21] -rw-r--r--. 1 boincer umatlas      5111 May 27 05:25 queuedata.json
[2025-06-04 12:20:21] -rwx------. 1 boincer umatlas     37140 May 27 05:25 runpilot2-wrapper.sh
[2025-06-04 12:20:21] -rw-r--r--. 1 boincer umatlas       100 Jun  4 11:10 wrapper_26015_x86_64-pc-linux-gnu
[2025-06-04 12:20:21] -rwxr-xr-x. 1 boincer umatlas      7986 Jun  4 11:10 run_atlas
[2025-06-04 12:20:21] -rw-r--r--. 1 boincer umatlas       105 Jun  4 11:10 job.xml
[2025-06-04 12:20:21] -rw-r--r--. 2 boincer umatlas 223799775 Jun  4 11:10 EVNT.44871834._002569.pool.root.1
[2025-06-04 12:20:21] -rw-r--r--. 2 boincer umatlas     15093 Jun  4 11:10 start_atlas.sh
[2025-06-04 12:20:21] drwxrwx--x. 2 boincer umatlas      4096 Jun  4 11:10 shared
[2025-06-04 12:20:21] -rw-r--r--. 2 boincer umatlas    508880 Jun  4 11:10 input.tar.gz
[2025-06-04 12:20:21] -rw-r--r--. 1 boincer umatlas         0 Jun  4 11:10 boinc_lockfile
[2025-06-04 12:20:21] -rw-r--r--. 1 boincer umatlas      2559 Jun  4 11:10 pandaJob.out
[2025-06-04 12:20:21] -rw-------. 1 boincer umatlas    987207 Jun  4 11:10 agis_schedconf.cvmfs.json
[2025-06-04 12:20:21] -rw-------. 1 boincer umatlas   1598969 Jun  4 11:10 agis_ddmendpoints.agis.ALL.json
[2025-06-04 12:20:21] drwx------. 4 boincer umatlas      4096 Jun  4 11:10 pilot3
[2025-06-04 12:20:21] -rw-r--r--. 1 boincer umatlas      6857 Jun  4 12:18 init_data.xml
[2025-06-04 12:20:21] -rw-------. 1 boincer umatlas        95 Jun  4 12:19 pilot_heartbeat.json
[2025-06-04 12:20:21] -rw-------. 1 boincer umatlas 198660650 Jun  4 12:19 HITS.44871837._065194.pool.root.1
[2025-06-04 12:20:21] -rw-r--r--. 1 boincer umatlas       529 Jun  4 12:19 boinc_task_state.xml
[2025-06-04 12:20:21] -rw-------. 1 boincer umatlas      1037 Jun  4 12:19 memory_monitor_summary.json
[2025-06-04 12:20:21] -rw-------. 1 boincer umatlas    316959 Jun  4 12:20 log.44871837._065194.job.log.tgz.1
[2025-06-04 12:20:21] -rw-------. 1 boincer umatlas      7713 Jun  4 12:20 heartbeat.json
[2025-06-04 12:20:21] -rw-r--r--. 1 boincer umatlas      8192 Jun  4 12:20 boinc_mmap_file
[2025-06-04 12:20:21] -rw-r--r--. 1 boincer umatlas        27 Jun  4 12:20 wrapper_checkpoint.txt
[2025-06-04 12:20:21] -rw-------. 1 boincer umatlas      4353 Jun  4 12:20 pilotlog.txt
[2025-06-04 12:20:21] -rw-------. 1 boincer umatlas    419898 Jun  4 12:20 log.44871837._065194.job.log.1
[2025-06-04 12:20:21] -rw-------. 1 boincer umatlas       357 Jun  4 12:20 output.list
[2025-06-04 12:20:21] -rw-r--r--. 1 boincer umatlas       620 Jun  4 12:20 runtime_log
[2025-06-04 12:20:21] -rw-------. 1 boincer umatlas    757760 Jun  4 12:20 result.tar.gz
[2025-06-04 12:20:21] -rw-r--r--. 1 boincer umatlas      8664 Jun  4 12:20 runtime_log.err
[2025-06-04 12:20:21] -rw-------. 1 boincer umatlas       652 Jun  4 12:20 KNzKDmlj5d7nsSi4ap6QjLDmwznN0nGgGQJmUXzaDmz1YKDmDUIWvm.diag
[2025-06-04 12:20:21] -rw-r--r--. 1 boincer umatlas     21379 Jun  4 12:20 stderr.txt
[2025-06-04 12:20:21] HITS file was successfully produced:
[2025-06-04 12:20:21] -rw-------. 1 boincer umatlas 198660650 Jun  4 12:19 shared/HITS.pool.root.1
[2025-06-04 12:20:21]  *** Contents of shared directory: ***
[2025-06-04 12:20:21] total 413824
[2025-06-04 12:20:21] -rw-r--r--. 2 boincer umatlas 223799775 Jun  4 11:10 ATLAS.root_0
[2025-06-04 12:20:21] -rw-r--r--. 2 boincer umatlas     15093 Jun  4 11:10 start_atlas.sh
[2025-06-04 12:20:21] -rw-r--r--. 2 boincer umatlas    508880 Jun  4 11:10 input.tar.gz
[2025-06-04 12:20:21] -rw-------. 1 boincer umatlas 198660650 Jun  4 12:19 HITS.pool.root.1
[2025-06-04 12:20:21] -rw-------. 1 boincer umatlas    757760 Jun  4 12:20 result.tar.gz
12:20:22 (943695): run_atlas exited; CPU time 31343.657195
12:20:22 (943695): called boinc_finish(0)

</stderr_txt>
]]>

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