Stderr output

<core_client_version>8.1.0</core_client_version>
<![CDATA[
<stderr_txt>
11:02:52 (1583046): wrapper (7.7.26015): starting
11:02:52 (1583046): wrapper: running run_atlas (--nthreads 8)
[2025-06-04 11:02:52] Arguments: --nthreads 8
[2025-06-04 11:02:52] Threads: 8
[2025-06-04 11:02:52] Checking for CVMFS
[2025-06-04 11:02:52] Probing /cvmfs/atlas.cern.ch... OK
[2025-06-04 11:02:52] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-06-04 11:02:52] Running cvmfs_config stat atlas.cern.ch
[2025-06-04 11:02:53] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-06-04 11:02:53] 2.12.6.0 5779 31560 459412 146768 -600 939 25275908 32935936 15999 16776704 3 90978045 99.643 88704235 10214 http://cvmfs-s1fnal.opensciencegrid.org:8000/cvmfs/atlas.cern.ch http://192.41.231.237:6081 1
[2025-06-04 11:02:53] CVMFS is ok
[2025-06-04 11:02:53] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-06-04 11:02:53] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2025-06-04 11:02:53] Further information can be found at the LHC@home message board.
[2025-06-04 11:02:53] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-06-04 11:02:53] Checking for apptainer binary...
[2025-06-04 11:02:53] Using apptainer found in PATH at /usr/bin/apptainer
[2025-06-04 11:02:53] Running /usr/bin/apptainer --version
[2025-06-04 11:02:53] apptainer version 1.4.1-1.el9
[2025-06-04 11:02:53] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-06-04 11:02:53] c6-12-25-2.aglt2.org
[2025-06-04 11:02:53] apptainer works
[2025-06-04 11:02:53] Set ATHENA_PROC_NUMBER=8
[2025-06-04 11:02:53] Set ATHENA_CORE_NUMBER=8
[2025-06-04 11:02:54] Starting ATLAS job with PandaID=6679807758
[2025-06-04 11:02:54] Running command: /usr/bin/apptainer exec -B /cvmfs,/tmp/boinchome/slots/1 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-06-04 14:28:36]  *** The last 200 lines of the pilot log: ***
[2025-06-04 14:28:36] 2025-06-04 18:28:18,580 | INFO     | CPU arch script returned: x86-64-v4
[2025-06-04 14:28:36] 2025-06-04 18:28:18,581 | INFO     | using path: /tmp/boinchome/slots/1/PanDA_Pilot-6679807758/memory_monitor_summary.json (trf name=prmon)
[2025-06-04 14:28:36] 2025-06-04 18:28:18,583 | INFO     | extracted standard info from prmon json
[2025-06-04 14:28:36] 2025-06-04 18:28:18,584 | INFO     | extracted standard memory fields from prmon json
[2025-06-04 14:28:36] 2025-06-04 18:28:18,584 | WARNING  | GPU info not found in prmon json: 'gpu'
[2025-06-04 14:28:36] 2025-06-04 18:28:18,585 | WARNING  | format EVNTtoHITS has no such key: dbData
[2025-06-04 14:28:36] 2025-06-04 18:28:18,585 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2025-06-04 14:28:36] 2025-06-04 18:28:18,596 | INFO     | fitting pss+swap vs Time
[2025-06-04 14:28:36] 2025-06-04 18:28:18,597 | INFO     | sum of square deviations: 2518000700.0
[2025-06-04 14:28:36] 2025-06-04 18:28:18,600 | INFO     | sum of deviations: 67250165286.000015
[2025-06-04 14:28:36] 2025-06-04 18:28:18,601 | INFO     | mean x: 1749055540.0
[2025-06-04 14:28:36] 2025-06-04 18:28:18,601 | INFO     | mean y: 2214799.9402985075
[2025-06-04 14:28:36] 2025-06-04 18:28:18,601 | INFO     | -- intersect: -46711145589.27405
[2025-06-04 14:28:36] 2025-06-04 18:28:18,601 | INFO     | intersect: -46711145589.27405
[2025-06-04 14:28:36] 2025-06-04 18:28:18,602 | INFO     | chi2: 3.3242583528472984
[2025-06-04 14:28:36] 2025-06-04 18:28:18,603 | INFO     | sum of square deviations: 2334722845.0
[2025-06-04 14:28:36] 2025-06-04 18:28:18,607 | INFO     | sum of deviations: 75215304762.99998
[2025-06-04 14:28:36] 2025-06-04 18:28:18,607 | INFO     | mean x: 1749055387.5
[2025-06-04 14:28:36] 2025-06-04 18:28:18,607 | INFO     | mean y: 2221211.214285714
[2025-06-04 14:28:36] 2025-06-04 18:28:18,608 | INFO     | -- intersect: -56345252451.41633
[2025-06-04 14:28:36] 2025-06-04 18:28:18,608 | INFO     | intersect: -56345252451.41633
[2025-06-04 14:28:36] 2025-06-04 18:28:18,609 | INFO     | chi2: 2.5622657307477223
[2025-06-04 14:28:36] 2025-06-04 18:28:18,609 | INFO     | current chi2=2.5622657307477223 (change=22.922184175213488 %)
[2025-06-04 14:28:36] 2025-06-04 18:28:18,609 | INFO     | right removable region: 195
[2025-06-04 14:28:36] 2025-06-04 18:28:18,610 | INFO     | sum of square deviations: 2334722845.0
[2025-06-04 14:28:36] 2025-06-04 18:28:18,613 | INFO     | sum of deviations: 27107120982.499996
[2025-06-04 14:28:36] 2025-06-04 18:28:18,614 | INFO     | mean x: 1749055692.5
[2025-06-04 14:28:36] 2025-06-04 18:28:18,614 | INFO     | mean y: 2248057.2295918367
[2025-06-04 14:28:36] 2025-06-04 18:28:18,614 | INFO     | -- intersect: -20305029255.477654
[2025-06-04 14:28:36] 2025-06-04 18:28:18,615 | INFO     | intersect: -20305029255.477654
[2025-06-04 14:28:36] 2025-06-04 18:28:18,615 | INFO     | chi2: 1.3499475406021337
[2025-06-04 14:28:36] 2025-06-04 18:28:18,616 | INFO     | current chi2=1.3499475406021337 (change=59.391016060894465 %)
[2025-06-04 14:28:36] 2025-06-04 18:28:18,617 | INFO     | sum of square deviations: 2160561440.0
[2025-06-04 14:28:36] 2025-06-04 18:28:18,620 | INFO     | sum of deviations: 5902836471.0
[2025-06-04 14:28:36] 2025-06-04 18:28:18,620 | INFO     | mean x: 1749055845.0
[2025-06-04 14:28:36] 2025-06-04 18:28:18,621 | INFO     | mean y: 2266580.0104712043
[2025-06-04 14:28:36] 2025-06-04 18:28:18,621 | INFO     | -- intersect: -4776301823.802994
[2025-06-04 14:28:36] 2025-06-04 18:28:18,621 | INFO     | intersect: -4776301823.802994
[2025-06-04 14:28:36] 2025-06-04 18:28:18,622 | INFO     | chi2: 0.8724281646243734
[2025-06-04 14:28:36] 2025-06-04 18:28:18,622 | INFO     | current chi2=0.8724281646243734 (change=35.37318018778466 %)
[2025-06-04 14:28:36] 2025-06-04 18:28:18,623 | INFO     | sum of square deviations: 1995283922.5
[2025-06-04 14:28:36] 2025-06-04 18:28:18,626 | INFO     | sum of deviations: 1308568340.000002
[2025-06-04 14:28:36] 2025-06-04 18:28:18,626 | INFO     | mean x: 1749055997.5
[2025-06-04 14:28:36] 2025-06-04 18:28:18,627 | INFO     | mean y: 2270780.2365591396
[2025-06-04 14:28:36] 2025-06-04 18:28:18,627 | INFO     | -- intersect: -1144813741.1221411
[2025-06-04 14:28:36] 2025-06-04 18:28:18,627 | INFO     | intersect: -1144813741.1221411
[2025-06-04 14:28:36] 2025-06-04 18:28:18,628 | INFO     | chi2: 0.8404048162507626
[2025-06-04 14:28:36] 2025-06-04 18:28:18,628 | INFO     | current chi2=0.8404048162507626 (change=3.6706000186730128 %)
[2025-06-04 14:28:36] 2025-06-04 18:28:18,629 | INFO     | left removable region: 30
[2025-06-04 14:28:36] 2025-06-04 18:28:18,630 | INFO     | sum of square deviations: 1392881930.0
[2025-06-04 14:28:36] 2025-06-04 18:28:18,632 | INFO     | sum of deviations: 6423312200.0
[2025-06-04 14:28:36] 2025-06-04 18:28:18,632 | INFO     | mean x: 1749056272.0
[2025-06-04 14:28:36] 2025-06-04 18:28:18,633 | INFO     | mean y: 2281733.6666666665
[2025-06-04 14:28:36] 2025-06-04 18:28:18,633 | INFO     | -- intersect: -8063537951.727715
[2025-06-04 14:28:36] 2025-06-04 18:28:18,633 | INFO     | intersect: -8063537951.727715
[2025-06-04 14:28:36] 2025-06-04 18:28:18,634 | INFO     | chi2: 0.04378370011983305
[2025-06-04 14:28:36] 2025-06-04 18:28:18,634 | INFO     | -- intersect: -8063537951.727715
[2025-06-04 14:28:36] 2025-06-04 18:28:18,635 | INFO     | current memory leak: 4.61 B/s (using 165 data points, chi2=0.04)
[2025-06-04 14:28:36] 2025-06-04 18:28:18,636 | INFO     | ..............................
[2025-06-04 14:28:36] 2025-06-04 18:28:18,636 | INFO     | . Timing measurements:
[2025-06-04 14:28:36] 2025-06-04 18:28:18,637 | INFO     | . get job = 0 s
[2025-06-04 14:28:36] 2025-06-04 18:28:18,637 | INFO     | . initial setup = 4 s
[2025-06-04 14:28:36] 2025-06-04 18:28:18,637 | INFO     | . payload setup = 14 s
[2025-06-04 14:28:36] 2025-06-04 18:28:18,637 | INFO     | . stage-in = 0 s
[2025-06-04 14:28:36] 2025-06-04 18:28:18,638 | INFO     | . payload execution = 12247 s
[2025-06-04 14:28:36] 2025-06-04 18:28:18,638 | INFO     | . stage-out = 3 s
[2025-06-04 14:28:36] 2025-06-04 18:28:18,638 | INFO     | . log creation = 0 s
[2025-06-04 14:28:36] 2025-06-04 18:28:18,638 | INFO     | ..............................
[2025-06-04 14:28:36] 2025-06-04 18:28:19,329 | INFO     | 
[2025-06-04 14:28:36] 2025-06-04 18:28:19,329 | INFO     | job summary report
[2025-06-04 14:28:36] 2025-06-04 18:28:19,330 | INFO     | --------------------------------------------------
[2025-06-04 14:28:36] 2025-06-04 18:28:19,330 | INFO     | PanDA job id: 6679807758
[2025-06-04 14:28:36] 2025-06-04 18:28:19,330 | INFO     | task id: 45006595
[2025-06-04 14:28:36] 2025-06-04 18:28:19,330 | INFO     | errors: (none)
[2025-06-04 14:28:36] 2025-06-04 18:28:19,331 | INFO     | status: LOG_TRANSFER = DONE 
[2025-06-04 14:28:36] 2025-06-04 18:28:19,331 | INFO     | pilot state: finished 
[2025-06-04 14:28:36] 2025-06-04 18:28:19,331 | INFO     | transexitcode: 0
[2025-06-04 14:28:36] 2025-06-04 18:28:19,331 | INFO     | exeerrorcode: 0
[2025-06-04 14:28:36] 2025-06-04 18:28:19,331 | INFO     | exeerrordiag: 
[2025-06-04 14:28:36] 2025-06-04 18:28:19,332 | INFO     | exitcode: 0
[2025-06-04 14:28:36] 2025-06-04 18:28:19,332 | INFO     | exitmsg: OK
[2025-06-04 14:28:36] 2025-06-04 18:28:19,333 | INFO     | cpuconsumptiontime: 90594 s
[2025-06-04 14:28:36] 2025-06-04 18:28:19,333 | INFO     | nevents: 400
[2025-06-04 14:28:36] 2025-06-04 18:28:19,333 | INFO     | neventsw: 0
[2025-06-04 14:28:36] 2025-06-04 18:28:19,333 | INFO     | pid: 1598778
[2025-06-04 14:28:36] 2025-06-04 18:28:19,333 | INFO     | pgrp: 1598778
[2025-06-04 14:28:36] 2025-06-04 18:28:19,333 | INFO     | corecount: 8
[2025-06-04 14:28:36] 2025-06-04 18:28:19,334 | INFO     | event service: False
[2025-06-04 14:28:36] 2025-06-04 18:28:19,334 | INFO     | sizes: {0: 2397064, 1: 2397148, 2: 2397347, 11: 2397553, 13: 2397581, 12265: 2427531, 12266: 2427658, 12271: 2436655, 12272: 2436711, 12281: 2436881}
[2025-06-04 14:28:36] 2025-06-04 18:28:19,334 | INFO     | --------------------------------------------------
[2025-06-04 14:28:36] 2025-06-04 18:28:19,334 | INFO     | 
[2025-06-04 14:28:36] 2025-06-04 18:28:19,334 | INFO     | executing command: ls -lF /tmp/boinchome/slots/1
[2025-06-04 14:28:36] 2025-06-04 18:28:19,376 | INFO     | queue jobs had 0 job(s) [purged]
[2025-06-04 14:28:36] 2025-06-04 18:28:19,377 | INFO     | queue payloads had 0 job(s) [purged]
[2025-06-04 14:28:36] 2025-06-04 18:28:19,377 | INFO     | queue data_in had 0 job(s) [purged]
[2025-06-04 14:28:36] 2025-06-04 18:28:19,377 | INFO     | queue data_out had 0 job(s) [purged]
[2025-06-04 14:28:36] 2025-06-04 18:28:19,377 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-06-04 14:28:36] 2025-06-04 18:28:19,378 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-06-04 14:28:36] 2025-06-04 18:28:19,378 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-06-04 14:28:36] 2025-06-04 18:28:19,378 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-06-04 14:28:36] 2025-06-04 18:28:19,378 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-06-04 14:28:36] 2025-06-04 18:28:19,378 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-06-04 14:28:36] 2025-06-04 18:28:19,379 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-06-04 14:28:36] 2025-06-04 18:28:19,379 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-06-04 14:28:36] 2025-06-04 18:28:19,379 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-06-04 14:28:36] 2025-06-04 18:28:19,379 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-06-04 14:28:36] 2025-06-04 18:28:19,379 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-06-04 14:28:36] 2025-06-04 18:28:19,379 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-06-04 14:28:36] 2025-06-04 18:28:19,380 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-06-04 14:28:36] 2025-06-04 18:28:19,380 | INFO     | queue completed_jobids has 1 job(s)
[2025-06-04 14:28:36] 2025-06-04 18:28:19,380 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-06-04 14:28:36] 2025-06-04 18:28:19,380 | INFO     | queue messages had 0 job(s) [purged]
[2025-06-04 14:28:36] 2025-06-04 18:28:19,381 | INFO     | job 6679807758 has completed (purged errors)
[2025-06-04 14:28:36] 2025-06-04 18:28:19,381 | INFO     | overall cleanup function is called
[2025-06-04 14:28:36] 2025-06-04 18:28:20,393 | INFO     | --- collectZombieJob: --- 10, [1598778]
[2025-06-04 14:28:36] 2025-06-04 18:28:20,393 | INFO     | zombie collector waiting for pid 1598778
[2025-06-04 14:28:36] 2025-06-04 18:28:20,394 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-06-04 14:28:36] 2025-06-04 18:28:20,394 | INFO     | collected zombie processes
[2025-06-04 14:28:36] 2025-06-04 18:28:20,394 | INFO     | will attempt to kill all subprocesses of pid=1598778
[2025-06-04 14:28:36] 2025-06-04 18:28:21,307 | INFO     | process IDs to be killed: [1598778] (in reverse order)
[2025-06-04 14:28:36] 2025-06-04 18:28:21,556 | WARNING  | found no corresponding commands to process id(s)
[2025-06-04 14:28:36] 2025-06-04 18:28:21,557 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-06-04 14:28:36] 2025-06-04 18:28:21,589 | INFO     | did not find any defunct processes belonging to 1598778
[2025-06-04 14:28:36] 2025-06-04 18:28:21,619 | INFO     | did not find any defunct processes belonging to 1598778
[2025-06-04 14:28:36] 2025-06-04 18:28:21,620 | INFO     | ready for new job
[2025-06-04 14:28:36] 2025-06-04 18:28:21,620 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-06-04 14:28:36] 2025-06-04 18:28:21,624 | INFO     | **************************************
[2025-06-04 14:28:36] 2025-06-04 18:28:21,625 | INFO     | ***  PanDA Pilot version 3.10.2.2  ***
[2025-06-04 14:28:36] 2025-06-04 18:28:21,625 | INFO     | **************************************
[2025-06-04 14:28:36] 2025-06-04 18:28:21,625 | INFO     | 
[2025-06-04 14:28:36] 2025-06-04 18:28:21,652 | INFO     | architecture information:
[2025-06-04 14:28:36] 2025-06-04 18:28:21,653 | INFO     | executing command: cat /etc/os-release
[2025-06-04 14:28:36] 2025-06-04 18:28:21,678 | INFO     | cat /etc/os-release:
[2025-06-04 14:28:36] NAME="CentOS Linux"
[2025-06-04 14:28:36] VERSION="7 (Core)"
[2025-06-04 14:28:36] ID="centos"
[2025-06-04 14:28:36] ID_LIKE="rhel fedora"
[2025-06-04 14:28:36] VERSION_ID="7"
[2025-06-04 14:28:36] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-06-04 14:28:36] ANSI_COLOR="0;31"
[2025-06-04 14:28:36] CPE_NAME="cpe:/o:centos:centos:7"
[2025-06-04 14:28:36] HOME_URL="https://www.centos.org/"
[2025-06-04 14:28:36] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-06-04 14:28:36] 
[2025-06-04 14:28:36] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-06-04 14:28:36] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-06-04 14:28:36] REDHAT_SUPPORT_PRODUCT="centos"
[2025-06-04 14:28:36] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-06-04 14:28:36] 
[2025-06-04 14:28:36] 2025-06-04 18:28:21,679 | INFO     | **************************************
[2025-06-04 14:28:36] 2025-06-04 18:28:22,183 | INFO     | executing command: df -mP /tmp/boinchome/slots/1
[2025-06-04 14:28:36] 2025-06-04 18:28:22,217 | INFO     | sufficient remaining disk space (96033832960 B)
[2025-06-04 14:28:36] 2025-06-04 18:28:22,218 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-06-04 14:28:36] 2025-06-04 18:28:22,218 | INFO     | current server update state: UPDATING_FINAL
[2025-06-04 14:28:36] 2025-06-04 18:28:22,218 | INFO     | update_server=False
[2025-06-04 14:28:36] 2025-06-04 18:28:22,219 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-06-04 14:28:36] 2025-06-04 18:28:22,219 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-06-04 14:28:36] 2025-06-04 18:28:22,220 | INFO     | aborting loop
[2025-06-04 14:28:36] 2025-06-04 18:28:22,225 | INFO     | all job control threads have been joined
[2025-06-04 14:28:36] 2025-06-04 18:28:22,691 | INFO     | found 0 job(s) in 20 queues
[2025-06-04 14:28:36] 2025-06-04 18:28:22,692 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-06-04 14:28:36] 2025-06-04 18:28:22,692 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-06-04 14:28:36] 2025-06-04 18:28:23,222 | INFO     | [job] job monitor thread has finished
[2025-06-04 14:28:36] 2025-06-04 18:28:23,224 | INFO     | [job] retrieve thread has finished
[2025-06-04 14:28:36] 2025-06-04 18:28:23,230 | INFO     | [job] control thread has finished
[2025-06-04 14:28:36] 2025-06-04 18:28:23,264 | INFO     | [job] validate thread has finished
[2025-06-04 14:28:36] 2025-06-04 18:28:23,280 | INFO     | [payload] execute_payloads thread has finished
[2025-06-04 14:28:36] 2025-06-04 18:28:23,299 | INFO     | all data control threads have been joined
[2025-06-04 14:28:36] 2025-06-04 18:28:23,399 | INFO     | all payload control threads have been joined
[2025-06-04 14:28:36] 2025-06-04 18:28:23,462 | INFO     | [job] create_data_payload thread has finished
[2025-06-04 14:28:36] 2025-06-04 18:28:23,623 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-06-04 14:28:36] 2025-06-04 18:28:23,839 | INFO     | [payload] validate_post thread has finished
[2025-06-04 14:28:36] 2025-06-04 18:28:23,865 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-06-04 14:28:36] 2025-06-04 18:28:23,953 | INFO     | [payload] failed_post thread has finished
[2025-06-04 14:28:36] 2025-06-04 18:28:24,305 | INFO     | [data] control thread has finished
[2025-06-04 14:28:36] 2025-06-04 18:28:24,340 | INFO     | [payload] validate_pre thread has finished
[2025-06-04 14:28:36] 2025-06-04 18:28:24,404 | INFO     | [payload] control thread has finished
[2025-06-04 14:28:36] 2025-06-04 18:28:24,453 | INFO     | [payload] run_realtimelog thread has finished
[2025-06-04 14:28:36] 2025-06-04 18:28:24,495 | INFO     | [data] copytool_in thread has finished
[2025-06-04 14:28:36] 2025-06-04 18:28:24,570 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-06-04 14:28:36] 2025-06-04 18:28:24,871 | INFO     | [job] queue monitor thread has finished
[2025-06-04 14:28:36] 2025-06-04 18:28:25,629 | INFO     | [data] copytool_out thread has finished
[2025-06-04 14:28:36] 2025-06-04 18:28:28,576 | INFO     | [data] queue_monitor thread has finished
[2025-06-04 14:28:36] 2025-06-04 18:28:30,480 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140094046353216)>', '<ExcThread(monitor, started 140093427799808)>']
[2025-06-04 14:28:36] 2025-06-04 18:28:30,726 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-06-04 14:28:36] 2025-06-04 18:28:30,726 | INFO     | [monitor] control thread has ended
[2025-06-04 14:28:36] 2025-06-04 18:28:35,506 | INFO     | all workflow threads have been joined
[2025-06-04 14:28:36] 2025-06-04 18:28:35,506 | INFO     | end of generic workflow (traces error code: 0)
[2025-06-04 14:28:36] 2025-06-04 18:28:35,509 | INFO     | traces error code: 0
[2025-06-04 14:28:36] 2025-06-04 18:28:35,510 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-06-04 14:28:36] 2025-06-04 18:28:35,785 [wrapper] ==== pilot stdout END ====
[2025-06-04 14:28:36] 2025-06-04 18:28:35,790 [wrapper] ==== wrapper stdout RESUME ====
[2025-06-04 14:28:36] 2025-06-04 18:28:35,796 [wrapper] pilotpid: 1589708
[2025-06-04 14:28:36] 2025-06-04 18:28:35,801 [wrapper] Pilot exit status: 0
[2025-06-04 14:28:36] 2025-06-04 18:28:35,820 [wrapper] pandaids: 6679807758
[2025-06-04 14:28:36] 2025-06-04 18:28:35,993 [wrapper] cleanup supervisor_pilot 2140429 1589709
[2025-06-04 14:28:36] 2025-06-04 18:28:36,000 [wrapper] Test setup, not cleaning
[2025-06-04 14:28:36] 2025-06-04 18:28:36,006 [wrapper] apfmon messages muted
[2025-06-04 14:28:36] 2025-06-04 18:28:36,012 [wrapper] ==== wrapper stdout END ====
[2025-06-04 14:28:36] 2025-06-04 18:28:36,019 [wrapper] ==== wrapper stderr END ====
[2025-06-04 14:28:36]  *** Error codes and diagnostics ***
[2025-06-04 14:28:36]     "exeErrorCode": 0,
[2025-06-04 14:28:36]     "exeErrorDiag": "",
[2025-06-04 14:28:36]     "pilotErrorCode": 0,
[2025-06-04 14:28:36]     "pilotErrorDiag": "",
[2025-06-04 14:28:36]  *** Listing of results directory ***
[2025-06-04 14:28:36] total 388444
[2025-06-04 14:28:36] -rw-r--r--. 1 boincer umatlas    495897 Jun  4 10:55 pilot3.tar.gz
[2025-06-04 14:28:36] -rw-r--r--. 1 boincer umatlas      5111 Jun  4 10:59 queuedata.json
[2025-06-04 14:28:36] -rwx------. 1 boincer umatlas     37140 Jun  4 11:02 runpilot2-wrapper.sh
[2025-06-04 14:28:36] -rw-r--r--. 1 boincer umatlas       100 Jun  4 11:02 wrapper_26015_x86_64-pc-linux-gnu
[2025-06-04 14:28:36] -rwxr-xr-x. 1 boincer umatlas      7986 Jun  4 11:02 run_atlas
[2025-06-04 14:28:36] -rw-r--r--. 1 boincer umatlas       105 Jun  4 11:02 job.xml
[2025-06-04 14:28:36] -rw-r--r--. 2 boincer umatlas 214589145 Jun  4 11:02 EVNT.45006593._001749.pool.root.1
[2025-06-04 14:28:36] -rw-r--r--. 2 boincer umatlas     15093 Jun  4 11:02 start_atlas.sh
[2025-06-04 14:28:36] drwxrwx--x. 2 boincer umatlas      4096 Jun  4 11:02 shared
[2025-06-04 14:28:36] -rw-r--r--. 2 boincer umatlas    508882 Jun  4 11:02 input.tar.gz
[2025-06-04 14:28:36] -rw-r--r--. 1 boincer umatlas         0 Jun  4 11:02 boinc_lockfile
[2025-06-04 14:28:36] -rw-r--r--. 1 boincer umatlas      2524 Jun  4 11:02 pandaJob.out
[2025-06-04 14:28:36] -rw-------. 1 boincer umatlas    986745 Jun  4 11:03 agis_schedconf.cvmfs.json
[2025-06-04 14:28:36] drwx------. 4 boincer umatlas      4096 Jun  4 11:03 pilot3
[2025-06-04 14:28:36] -rw-------. 1 boincer umatlas 176396925 Jun  4 14:26 HITS.45006595._056749.pool.root.1
[2025-06-04 14:28:36] -rw-r--r--. 1 boincer umatlas       531 Jun  4 14:26 boinc_task_state.xml
[2025-06-04 14:28:36] -rw-r--r--. 1 boincer umatlas      6859 Jun  4 14:27 init_data.xml
[2025-06-04 14:28:36] -rw-------. 1 boincer umatlas      1034 Jun  4 14:27 memory_monitor_summary.json
[2025-06-04 14:28:36] -rw-------. 1 boincer umatlas        95 Jun  4 14:27 pilot_heartbeat.json
[2025-06-04 14:28:36] -rw-r--r--. 1 boincer umatlas      8192 Jun  4 14:28 boinc_mmap_file
[2025-06-04 14:28:36] -rw-r--r--. 1 boincer umatlas        28 Jun  4 14:28 wrapper_checkpoint.txt
[2025-06-04 14:28:36] -rw-------. 1 boincer umatlas   1598969 Jun  4 14:28 agis_ddmendpoints.agis.ALL.json
[2025-06-04 14:28:36] -rw-------. 1 boincer umatlas    385525 Jun  4 14:28 log.45006595._056749.job.log.tgz.1
[2025-06-04 14:28:36] -rw-------. 1 boincer umatlas      7717 Jun  4 14:28 heartbeat.json
[2025-06-04 14:28:36] -rw-------. 1 boincer umatlas      4353 Jun  4 14:28 pilotlog.txt
[2025-06-04 14:28:36] -rw-------. 1 boincer umatlas   1086262 Jun  4 14:28 log.45006595._056749.job.log.1
[2025-06-04 14:28:36] -rw-------. 1 boincer umatlas       357 Jun  4 14:28 output.list
[2025-06-04 14:28:36] -rw-r--r--. 1 boincer umatlas       620 Jun  4 14:28 runtime_log
[2025-06-04 14:28:36] -rw-------. 1 boincer umatlas   1495040 Jun  4 14:28 result.tar.gz
[2025-06-04 14:28:36] -rw-r--r--. 1 boincer umatlas      8670 Jun  4 14:28 runtime_log.err
[2025-06-04 14:28:36] -rw-------. 1 boincer umatlas       657 Jun  4 14:28 9TjKDmMo4g7nsSi4ap6QjLDmwznN0nGgGQJmUXzaDmV0nKDmgaLXTo.diag
[2025-06-04 14:28:36] -rw-r--r--. 1 boincer umatlas     20863 Jun  4 14:28 stderr.txt
[2025-06-04 14:28:36] HITS file was successfully produced:
[2025-06-04 14:28:36] -rw-------. 1 boincer umatlas 176396925 Jun  4 14:26 shared/HITS.pool.root.1
[2025-06-04 14:28:36]  *** Contents of shared directory: ***
[2025-06-04 14:28:36] total 383808
[2025-06-04 14:28:36] -rw-r--r--. 2 boincer umatlas 214589145 Jun  4 11:02 ATLAS.root_0
[2025-06-04 14:28:36] -rw-r--r--. 2 boincer umatlas     15093 Jun  4 11:02 start_atlas.sh
[2025-06-04 14:28:36] -rw-r--r--. 2 boincer umatlas    508882 Jun  4 11:02 input.tar.gz
[2025-06-04 14:28:36] -rw-------. 1 boincer umatlas 176396925 Jun  4 14:26 HITS.pool.root.1
[2025-06-04 14:28:36] -rw-------. 1 boincer umatlas   1495040 Jun  4 14:28 result.tar.gz
14:28:37 (1583046): run_atlas exited; CPU time 91773.854270
14:28:37 (1583046): called boinc_finish(0)

</stderr_txt>
]]>

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