Stderr output

<core_client_version>8.0.4</core_client_version>
<![CDATA[
<stderr_txt>
03:31:05 (352634): wrapper (7.7.26015): starting
03:31:05 (352634): wrapper: running run_atlas (--nthreads 3)
[2025-06-05 03:31:05] Arguments: --nthreads 3
[2025-06-05 03:31:05] Threads: 3
[2025-06-05 03:31:05] Checking for CVMFS
[2025-06-05 03:31:05] Probing /cvmfs/atlas.cern.ch... OK
[2025-06-05 03:31:05] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-06-05 03:31:05] Running cvmfs_config stat atlas.cern.ch
[2025-06-05 03:31:05] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-06-05 03:31:05] 2.9.2.0 2860 1182 61824 146800 0 56 31693582 36864000 0 130560 0 941488 99.991 242243 12820 http://cvmfs-stratum-one.cern.ch:8000/cvmfs/atlas.cern.ch http://130.183.36.13:3128 1
[2025-06-05 03:31:05] CVMFS is ok
[2025-06-05 03:31:05] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-06-05 03:31:05] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2025-06-05 03:31:05] Further information can be found at the LHC@home message board.
[2025-06-05 03:31:05] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-06-05 03:31:05] Checking for apptainer binary...
[2025-06-05 03:31:05] Using apptainer found in PATH at /usr/bin/apptainer
[2025-06-05 03:31:05] Running /usr/bin/apptainer --version
[2025-06-05 03:31:05] apptainer version 1.3.6-6.1
[2025-06-05 03:31:05] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-06-05 03:31:06] magicA244b
[2025-06-05 03:31:06] apptainer works
[2025-06-05 03:31:06] Set ATHENA_PROC_NUMBER=3
[2025-06-05 03:31:06] Set ATHENA_CORE_NUMBER=3
[2025-06-05 03:31:06] Starting ATLAS job with PandaID=6679791545
[2025-06-05 03:31:06] Running command: /usr/bin/apptainer exec -B /cvmfs,/local/data/boinc/slots/0 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-06-05 04:52:52]  *** The last 200 lines of the pilot log: ***
[2025-06-05 04:52:52]  replicas=None
[2025-06-05 04:52:52]  scope=mc23_13p6TeV
[2025-06-05 04:52:52]  status=None
[2025-06-05 04:52:52]  status_code=0
[2025-06-05 04:52:52]  storage_token=
[2025-06-05 04:52:52]  surl=/local/data/boinc/slots/0/PanDA_Pilot-6679791545/log.45006595._056715.job.log.tgz.1
[2025-06-05 04:52:52]  turl=davs://dav.ndgf.org:443/atlas/disk/atlasdatadisk/rucio/mc23_13p6TeV/22/79/log.45006595._056715.job.log.tgz.1
[2025-06-05 04:52:52]  workdir=None
[2025-06-05 04:52:52] ]
[2025-06-05 04:52:52] 2025-06-05 02:52:25,484 | INFO     | transferring file log.45006595._056715.job.log.tgz.1 from /local/data/boinc/slots/0/PanDA_Pilot-6679791545/log.45006595._056715.job.log.tgz.1 to /local/data/boinc/
[2025-06-05 04:52:52] 2025-06-05 02:52:25,484 | INFO     | executing command: /usr/bin/env mv /local/data/boinc/slots/0/PanDA_Pilot-6679791545/log.45006595._056715.job.log.tgz.1 /local/data/boinc/slots/0/log.45006595._0567
[2025-06-05 04:52:52] 2025-06-05 02:52:25,496 | INFO     | adding to output.list: log.45006595._056715.job.log.tgz.1 davs://dav.ndgf.org:443/atlas/disk/atlasdatadisk/rucio/mc23_13p6TeV/22/79/log.45006595._056715.job.log.tg
[2025-06-05 04:52:52] 2025-06-05 02:52:25,497 | INFO     | alt stage-out settings: ['pl', 'write_lan', 'w', 'default'], allow_altstageout=False, remain_files=0, has_altstorage=True
[2025-06-05 04:52:52] 2025-06-05 02:52:25,497 | INFO     | summary of transferred files:
[2025-06-05 04:52:52] 2025-06-05 02:52:25,497 | INFO     |  -- lfn=log.45006595._056715.job.log.tgz.1, status_code=0, status=transferred
[2025-06-05 04:52:52] 2025-06-05 02:52:25,497 | INFO     | stage-out finished correctly
[2025-06-05 04:52:52] 2025-06-05 02:52:26,280 | INFO     | finished stage-out for finished payload, adding job to finished_jobs queue
[2025-06-05 04:52:52] 2025-06-05 02:52:29,276 | INFO     | job 6679791545 has state=finished
[2025-06-05 04:52:52] 2025-06-05 02:52:29,276 | INFO     | preparing for final server update for job 6679791545 in state='finished'
[2025-06-05 04:52:52] 2025-06-05 02:52:29,277 | INFO     | this job has now completed (state=finished)
[2025-06-05 04:52:52] 2025-06-05 02:52:29,277 | INFO     | pilot will not update the server (heartbeat message will be written to file)
[2025-06-05 04:52:52] 2025-06-05 02:52:29,277 | INFO     | log transfer has been attempted: DONE
[2025-06-05 04:52:52] 2025-06-05 02:52:29,278 | INFO     | job 6679791545 has finished - writing final server update
[2025-06-05 04:52:52] 2025-06-05 02:52:29,278 | INFO     | total number of processed events: 400 (read)
[2025-06-05 04:52:52] 2025-06-05 02:52:29,281 | INFO     | executing command: lscpu
[2025-06-05 04:52:52] 2025-06-05 02:52:29,298 | INFO     | executing command: export ATLAS_LOCAL_ROOT_BASE=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase;source ${ATLAS_LOCAL_ROOT_BASE}/user/atlasLocalSetup.sh --quiet;lsetup
[2025-06-05 04:52:52] 2025-06-05 02:52:29,550 | WARNING  | process 362783 can no longer be monitored (due to stat problems) - aborting
[2025-06-05 04:52:52] 2025-06-05 02:52:29,550 | INFO     | using path: /local/data/boinc/slots/0/PanDA_Pilot-6679791545/memory_monitor_summary.json (trf name=prmon)
[2025-06-05 04:52:52] 2025-06-05 02:52:29,550 | INFO     | using path: /local/data/boinc/slots/0/PanDA_Pilot-6679791545/memory_monitor_summary.json (trf name=prmon)
[2025-06-05 04:52:52] 2025-06-05 02:52:29,551 | INFO     | payload log (log.EVNTtoHITS) within allowed size limit (2147483648 B): 2251196 B
[2025-06-05 04:52:52] 2025-06-05 02:52:29,551 | INFO     | payload log (payload.stdout) within allowed size limit (2147483648 B): 15311 B
[2025-06-05 04:52:52] 2025-06-05 02:52:29,551 | INFO     | executing command: df -mP /local/data/boinc/slots/0
[2025-06-05 04:52:52] 2025-06-05 02:52:37,251 | INFO     | CPU arch script returned: x86-64-v3
[2025-06-05 04:52:52] 2025-06-05 02:52:37,253 | INFO     | using path: /local/data/boinc/slots/0/PanDA_Pilot-6679791545/memory_monitor_summary.json (trf name=prmon)
[2025-06-05 04:52:52] 2025-06-05 02:52:37,253 | INFO     | extracted standard info from prmon json
[2025-06-05 04:52:52] 2025-06-05 02:52:37,253 | INFO     | extracted standard memory fields from prmon json
[2025-06-05 04:52:52] 2025-06-05 02:52:37,253 | WARNING  | GPU info not found in prmon json: 'gpu'
[2025-06-05 04:52:52] 2025-06-05 02:52:37,254 | WARNING  | format EVNTtoHITS has no such key: dbData
[2025-06-05 04:52:52] 2025-06-05 02:52:37,254 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2025-06-05 04:52:52] 2025-06-05 02:52:37,254 | INFO     | fitting pss+swap vs Time
[2025-06-05 04:52:52] 2025-06-05 02:52:37,255 | INFO     | sum of square deviations: 120605052.0
[2025-06-05 04:52:52] 2025-06-05 02:52:37,255 | INFO     | sum of deviations: -10014483277.000008
[2025-06-05 04:52:52] 2025-06-05 02:52:37,255 | INFO     | mean x: 1749089604.0
[2025-06-05 04:52:52] 2025-06-05 02:52:37,256 | INFO     | mean y: 2453653.8767123288
[2025-06-05 04:52:52] 2025-06-05 02:52:37,256 | INFO     | -- intersect: 145238729404.85077
[2025-06-05 04:52:52] 2025-06-05 02:52:37,256 | INFO     | intersect: 145238729404.85077
[2025-06-05 04:52:52] 2025-06-05 02:52:37,256 | INFO     | chi2: 0.05080244638052469
[2025-06-05 04:52:52] 2025-06-05 02:52:37,256 | INFO     | -- intersect: 145238729404.85077
[2025-06-05 04:52:52] 2025-06-05 02:52:37,256 | INFO     | current memory leak: -83.04 B/s (using 73 data points, chi2=0.05)
[2025-06-05 04:52:52] 2025-06-05 02:52:37,256 | INFO     | ..............................
[2025-06-05 04:52:52] 2025-06-05 02:52:37,256 | INFO     | . Timing measurements:
[2025-06-05 04:52:52] 2025-06-05 02:52:37,256 | INFO     | . get job = 0 s
[2025-06-05 04:52:52] 2025-06-05 02:52:37,256 | INFO     | . initial setup = 1 s
[2025-06-05 04:52:52] 2025-06-05 02:52:37,256 | INFO     | . payload setup = 6 s
[2025-06-05 04:52:52] 2025-06-05 02:52:37,256 | INFO     | . stage-in = 0 s
[2025-06-05 04:52:52] 2025-06-05 02:52:37,256 | INFO     | . payload execution = 4841 s
[2025-06-05 04:52:52] 2025-06-05 02:52:37,256 | INFO     | . stage-out = 0 s
[2025-06-05 04:52:52] 2025-06-05 02:52:37,256 | INFO     | . log creation = 0 s
[2025-06-05 04:52:52] 2025-06-05 02:52:37,256 | INFO     | ..............................
[2025-06-05 04:52:52] 2025-06-05 02:52:37,270 | INFO     | sufficient remaining disk space (325227380736 B)
[2025-06-05 04:52:52] 2025-06-05 02:52:37,286 | INFO     | work directory size check will use 2537553920 B as a max limit (10% grace limit added)
[2025-06-05 04:52:52] 2025-06-05 02:52:37,289 | INFO     | 
[2025-06-05 04:52:52] 2025-06-05 02:52:37,289 | INFO     | job summary report
[2025-06-05 04:52:52] 2025-06-05 02:52:37,290 | INFO     | --------------------------------------------------
[2025-06-05 04:52:52] 2025-06-05 02:52:37,290 | INFO     | PanDA job id: 6679791545
[2025-06-05 04:52:52] 2025-06-05 02:52:37,290 | INFO     | task id: 45006595
[2025-06-05 04:52:52] 2025-06-05 02:52:37,290 | INFO     | errors: (none)
[2025-06-05 04:52:52] 2025-06-05 02:52:37,290 | INFO     | status: LOG_TRANSFER = DONE 
[2025-06-05 04:52:52] 2025-06-05 02:52:37,290 | INFO     | pilot state: finished 
[2025-06-05 04:52:52] 2025-06-05 02:52:37,290 | INFO     | transexitcode: 0
[2025-06-05 04:52:52] 2025-06-05 02:52:37,290 | INFO     | exeerrorcode: 0
[2025-06-05 04:52:52] 2025-06-05 02:52:37,290 | INFO     | exeerrordiag: 
[2025-06-05 04:52:52] 2025-06-05 02:52:37,290 | INFO     | exitcode: 0
[2025-06-05 04:52:52] 2025-06-05 02:52:37,290 | INFO     | exitmsg: OK
[2025-06-05 04:52:52] 2025-06-05 02:52:37,290 | INFO     | cpuconsumptiontime: 13828 s
[2025-06-05 04:52:52] 2025-06-05 02:52:37,290 | INFO     | nevents: 400
[2025-06-05 04:52:52] 2025-06-05 02:52:37,290 | INFO     | neventsw: 0
[2025-06-05 04:52:52] 2025-06-05 02:52:37,290 | INFO     | pid: 362783
[2025-06-05 04:52:52] 2025-06-05 02:52:37,290 | INFO     | pgrp: 362783
[2025-06-05 04:52:52] 2025-06-05 02:52:37,290 | INFO     | corecount: 3
[2025-06-05 04:52:52] 2025-06-05 02:52:37,290 | INFO     | event service: False
[2025-06-05 04:52:52] 2025-06-05 02:52:37,290 | INFO     | sizes: {0: 2397342, 4: 2397548, 11: 2397576, 4852: 2423775, 4853: 2432722, 4854: 2432778, 4865: 2433076}
[2025-06-05 04:52:52] 2025-06-05 02:52:37,290 | INFO     | --------------------------------------------------
[2025-06-05 04:52:52] 2025-06-05 02:52:37,290 | INFO     | 
[2025-06-05 04:52:52] 2025-06-05 02:52:37,290 | INFO     | executing command: ls -lF /local/data/boinc/slots/0
[2025-06-05 04:52:52] 2025-06-05 02:52:37,292 | INFO     | size of work directory /local/data/boinc/slots/0/PanDA_Pilot-6679791545: 2547942 B (within 2537553920 B limit)
[2025-06-05 04:52:52] 2025-06-05 02:52:37,293 | INFO     | pfn file=/local/data/boinc/slots/0/PanDA_Pilot-6679791545/HITS.45006595._056715.pool.root.1 does not exist (skip from workdir size calculation)
[2025-06-05 04:52:52] 2025-06-05 02:52:37,293 | INFO     | total size of present files: 0 B (workdir size: 2547942 B)
[2025-06-05 04:52:52] 2025-06-05 02:52:37,293 | INFO     | output file size check: skipping output file /local/data/boinc/slots/0/PanDA_Pilot-6679791545/HITS.45006595._056715.pool.root.1 since it does not exist
[2025-06-05 04:52:52] 2025-06-05 02:52:37,302 | INFO     | queue jobs had 0 job(s) [purged]
[2025-06-05 04:52:52] 2025-06-05 02:52:37,302 | INFO     | queue payloads had 0 job(s) [purged]
[2025-06-05 04:52:52] 2025-06-05 02:52:37,302 | INFO     | queue data_in had 0 job(s) [purged]
[2025-06-05 04:52:52] 2025-06-05 02:52:37,302 | INFO     | queue data_out had 0 job(s) [purged]
[2025-06-05 04:52:52] 2025-06-05 02:52:37,303 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-06-05 04:52:52] 2025-06-05 02:52:37,303 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-06-05 04:52:52] 2025-06-05 02:52:37,303 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-06-05 04:52:52] 2025-06-05 02:52:37,303 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-06-05 04:52:52] 2025-06-05 02:52:37,303 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-06-05 04:52:52] 2025-06-05 02:52:37,303 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-06-05 04:52:52] 2025-06-05 02:52:37,303 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-06-05 04:52:52] 2025-06-05 02:52:37,303 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-06-05 04:52:52] 2025-06-05 02:52:37,303 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-06-05 04:52:52] 2025-06-05 02:52:37,303 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-06-05 04:52:52] 2025-06-05 02:52:37,303 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-06-05 04:52:52] 2025-06-05 02:52:37,303 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-06-05 04:52:52] 2025-06-05 02:52:37,303 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-06-05 04:52:52] 2025-06-05 02:52:37,303 | INFO     | queue completed_jobids has 1 job(s)
[2025-06-05 04:52:52] 2025-06-05 02:52:37,303 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-06-05 04:52:52] 2025-06-05 02:52:37,303 | INFO     | queue messages had 0 job(s) [purged]
[2025-06-05 04:52:52] 2025-06-05 02:52:37,303 | INFO     | job 6679791545 has completed (purged errors)
[2025-06-05 04:52:52] 2025-06-05 02:52:37,303 | INFO     | overall cleanup function is called
[2025-06-05 04:52:52] 2025-06-05 02:52:37,335 | INFO     | number of running child processes to parent process 362783: 1
[2025-06-05 04:52:52] 2025-06-05 02:52:37,335 | INFO     | maximum number of monitored processes: 6
[2025-06-05 04:52:52] 2025-06-05 02:52:37,335 | INFO     | aborting job monitoring since job object (job id=6679791545) has expired
[2025-06-05 04:52:52] 2025-06-05 02:52:38,310 | INFO     | --- collectZombieJob: --- 10, [362783]
[2025-06-05 04:52:52] 2025-06-05 02:52:38,310 | INFO     | zombie collector waiting for pid 362783
[2025-06-05 04:52:52] 2025-06-05 02:52:38,311 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-06-05 04:52:52] 2025-06-05 02:52:38,311 | INFO     | collected zombie processes
[2025-06-05 04:52:52] 2025-06-05 02:52:38,311 | INFO     | will attempt to kill all subprocesses of pid=362783
[2025-06-05 04:52:52] 2025-06-05 02:52:38,349 | INFO     | process IDs to be killed: [362783] (in reverse order)
[2025-06-05 04:52:52] 2025-06-05 02:52:38,374 | WARNING  | found no corresponding commands to process id(s)
[2025-06-05 04:52:52] 2025-06-05 02:52:38,374 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-06-05 04:52:52] 2025-06-05 02:52:38,375 | INFO     | did not find any defunct processes belonging to 362783
[2025-06-05 04:52:52] 2025-06-05 02:52:38,376 | INFO     | did not find any defunct processes belonging to 362783
[2025-06-05 04:52:52] 2025-06-05 02:52:38,376 | INFO     | ready for new job
[2025-06-05 04:52:52] 2025-06-05 02:52:38,376 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-06-05 04:52:52] 2025-06-05 02:52:38,377 | INFO     | **************************************
[2025-06-05 04:52:52] 2025-06-05 02:52:38,377 | INFO     | ***  PanDA Pilot version 3.10.2.2  ***
[2025-06-05 04:52:52] 2025-06-05 02:52:38,377 | INFO     | **************************************
[2025-06-05 04:52:52] 2025-06-05 02:52:38,377 | INFO     | 
[2025-06-05 04:52:52] 2025-06-05 02:52:38,377 | INFO     | architecture information:
[2025-06-05 04:52:52] 2025-06-05 02:52:38,378 | INFO     | executing command: cat /etc/os-release
[2025-06-05 04:52:52] 2025-06-05 02:52:38,387 | INFO     | cat /etc/os-release:
[2025-06-05 04:52:52] NAME="CentOS Linux"
[2025-06-05 04:52:52] VERSION="7 (Core)"
[2025-06-05 04:52:52] ID="centos"
[2025-06-05 04:52:52] ID_LIKE="rhel fedora"
[2025-06-05 04:52:52] VERSION_ID="7"
[2025-06-05 04:52:52] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-06-05 04:52:52] ANSI_COLOR="0;31"
[2025-06-05 04:52:52] CPE_NAME="cpe:/o:centos:centos:7"
[2025-06-05 04:52:52] HOME_URL="https://www.centos.org/"
[2025-06-05 04:52:52] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-06-05 04:52:52] 
[2025-06-05 04:52:52] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-06-05 04:52:52] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-06-05 04:52:52] REDHAT_SUPPORT_PRODUCT="centos"
[2025-06-05 04:52:52] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-06-05 04:52:52] 
[2025-06-05 04:52:52] 2025-06-05 02:52:38,387 | INFO     | **************************************
[2025-06-05 04:52:52] 2025-06-05 02:52:38,891 | INFO     | executing command: df -mP /local/data/boinc/slots/0
[2025-06-05 04:52:52] 2025-06-05 02:52:38,903 | INFO     | sufficient remaining disk space (325230526464 B)
[2025-06-05 04:52:52] 2025-06-05 02:52:38,903 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-06-05 04:52:52] 2025-06-05 02:52:38,904 | INFO     | current server update state: UPDATING_FINAL
[2025-06-05 04:52:52] 2025-06-05 02:52:38,904 | INFO     | update_server=False
[2025-06-05 04:52:52] 2025-06-05 02:52:38,904 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-06-05 04:52:52] 2025-06-05 02:52:38,904 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-06-05 04:52:52] 2025-06-05 02:52:38,904 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-06-05 04:52:52] 2025-06-05 02:52:38,904 | INFO     | aborting loop
[2025-06-05 04:52:52] 2025-06-05 02:52:38,904 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-06-05 04:52:52] 2025-06-05 02:52:39,000 | INFO     | all job control threads have been joined
[2025-06-05 04:52:52] 2025-06-05 02:52:39,701 | INFO     | all data control threads have been joined
[2025-06-05 04:52:52] 2025-06-05 02:52:39,866 | INFO     | found 0 job(s) in 20 queues
[2025-06-05 04:52:52] 2025-06-05 02:52:39,866 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-06-05 04:52:52] 2025-06-05 02:52:39,867 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-06-05 04:52:52] 2025-06-05 02:52:39,909 | INFO     | [job] queue monitor thread has finished
[2025-06-05 04:52:52] 2025-06-05 02:52:39,910 | INFO     | [job] retrieve thread has finished
[2025-06-05 04:52:52] 2025-06-05 02:52:39,911 | INFO     | [job] job monitor thread has finished
[2025-06-05 04:52:52] 2025-06-05 02:52:39,949 | INFO     | [payload] validate_post thread has finished
[2025-06-05 04:52:52] 2025-06-05 02:52:40,006 | INFO     | [job] control thread has finished
[2025-06-05 04:52:52] 2025-06-05 02:52:40,213 | INFO     | [payload] failed_post thread has finished
[2025-06-05 04:52:52] 2025-06-05 02:52:40,318 | INFO     | all payload control threads have been joined
[2025-06-05 04:52:52] 2025-06-05 02:52:40,517 | INFO     | [payload] execute_payloads thread has finished
[2025-06-05 04:52:52] 2025-06-05 02:52:40,595 | INFO     | [data] copytool_in thread has finished
[2025-06-05 04:52:52] 2025-06-05 02:52:40,652 | INFO     | [payload] run_realtimelog thread has finished
[2025-06-05 04:52:52] 2025-06-05 02:52:40,707 | INFO     | [data] control thread has finished
[2025-06-05 04:52:52] 2025-06-05 02:52:40,790 | INFO     | [payload] validate_pre thread has finished
[2025-06-05 04:52:52] 2025-06-05 02:52:40,910 | INFO     | [data] copytool_out thread has finished
[2025-06-05 04:52:52] 2025-06-05 02:52:40,919 | INFO     | [job] validate thread has finished
[2025-06-05 04:52:52] 2025-06-05 02:52:41,062 | INFO     | [job] create_data_payload thread has finished
[2025-06-05 04:52:52] 2025-06-05 02:52:41,323 | INFO     | [payload] control thread has finished
[2025-06-05 04:52:52] 2025-06-05 02:52:41,326 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-06-05 04:52:52] 2025-06-05 02:52:45,333 | INFO     | [data] queue_monitor thread has finished
[2025-06-05 04:52:52] 2025-06-05 02:52:46,892 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 139926581086016)>', '<ExcThread(monitor, started 139925856966400)>']
[2025-06-05 04:52:52] 2025-06-05 02:52:46,902 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-06-05 04:52:52] 2025-06-05 02:52:46,902 | INFO     | [monitor] control thread has ended
[2025-06-05 04:52:52] 2025-06-05 02:52:51,898 | INFO     | all workflow threads have been joined
[2025-06-05 04:52:52] 2025-06-05 02:52:51,898 | INFO     | end of generic workflow (traces error code: 0)
[2025-06-05 04:52:52] 2025-06-05 02:52:51,899 | INFO     | traces error code: 0
[2025-06-05 04:52:52] 2025-06-05 02:52:51,899 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-06-05 04:52:52] 2025-06-05 02:52:51,945 [wrapper] ==== pilot stdout END ====
[2025-06-05 04:52:52] 2025-06-05 02:52:51,949 [wrapper] ==== wrapper stdout RESUME ====
[2025-06-05 04:52:52] 2025-06-05 02:52:51,951 [wrapper] pilotpid: 356285
[2025-06-05 04:52:52] 2025-06-05 02:52:51,954 [wrapper] Pilot exit status: 0
[2025-06-05 04:52:52] 2025-06-05 02:52:51,962 [wrapper] pandaids: 6679791545
[2025-06-05 04:52:52] 2025-06-05 02:52:51,979 [wrapper] cleanup supervisor_pilot  374749 356286
[2025-06-05 04:52:52] 2025-06-05 02:52:51,982 [wrapper] Test setup, not cleaning
[2025-06-05 04:52:52] 2025-06-05 02:52:51,985 [wrapper] apfmon messages muted
[2025-06-05 04:52:52] 2025-06-05 02:52:51,987 [wrapper] ==== wrapper stdout END ====
[2025-06-05 04:52:52] 2025-06-05 02:52:51,990 [wrapper] ==== wrapper stderr END ====
[2025-06-05 04:52:52]  *** Error codes and diagnostics ***
[2025-06-05 04:52:52]     "exeErrorCode": 0,
[2025-06-05 04:52:52]     "exeErrorDiag": "",
[2025-06-05 04:52:52]     "pilotErrorCode": 0,
[2025-06-05 04:52:52]     "pilotErrorDiag": "",
[2025-06-05 04:52:52]  *** Listing of results directory ***
[2025-06-05 04:52:52] total 391356
[2025-06-05 04:52:52] -rw-r--r-- 1 boinc boinc    495897 Jun  4 16:23 pilot3.tar.gz
[2025-06-05 04:52:52] -rw-r--r-- 1 boinc boinc      5111 Jun  4 16:35 queuedata.json
[2025-06-05 04:52:52] -rwx------ 1 boinc boinc     37140 Jun  4 16:36 runpilot2-wrapper.sh
[2025-06-05 04:52:52] -rw-r--r-- 1 boinc boinc       100 Jun  5 03:31 wrapper_26015_x86_64-pc-linux-gnu
[2025-06-05 04:52:52] -rwxr-xr-x 1 boinc boinc      7986 Jun  5 03:31 run_atlas
[2025-06-05 04:52:52] -rw-r--r-- 1 boinc boinc       105 Jun  5 03:31 job.xml
[2025-06-05 04:52:52] -rw-r--r-- 2 boinc boinc 217954370 Jun  5 03:31 EVNT.45006593._000404.pool.root.1
[2025-06-05 04:52:52] -rw-r--r-- 1 boinc boinc      6683 Jun  5 03:31 init_data.xml
[2025-06-05 04:52:52] drwxrwx--x 2 boinc boinc      4096 Jun  5 03:31 shared
[2025-06-05 04:52:52] -rw-r--r-- 2 boinc boinc    508875 Jun  5 03:31 input.tar.gz
[2025-06-05 04:52:52] -rw-r--r-- 2 boinc boinc     15093 Jun  5 03:31 start_atlas.sh
[2025-06-05 04:52:52] -rw-r--r-- 1 boinc boinc         0 Jun  5 03:31 boinc_lockfile
[2025-06-05 04:52:52] -rw-r--r-- 1 boinc boinc      2523 Jun  5 03:31 pandaJob.out
[2025-06-05 04:52:52] -rw------- 1 boinc boinc    987109 Jun  5 03:31 agis_schedconf.cvmfs.json
[2025-06-05 04:52:52] -rw------- 1 boinc boinc   1598969 Jun  5 03:31 agis_ddmendpoints.agis.ALL.json
[2025-06-05 04:52:52] drwx------ 4 boinc boinc      4096 Jun  5 03:31 pilot3
[2025-06-05 04:52:52] -rw------- 1 boinc boinc 177546302 Jun  5 04:52 HITS.45006595._056715.pool.root.1
[2025-06-05 04:52:52] -rw-r--r-- 1 boinc boinc       529 Jun  5 04:52 boinc_task_state.xml
[2025-06-05 04:52:52] -rw------- 1 boinc boinc      1013 Jun  5 04:52 memory_monitor_summary.json
[2025-06-05 04:52:52] -rw------- 1 boinc boinc    232204 Jun  5 04:52 log.45006595._056715.job.log.tgz.1
[2025-06-05 04:52:52] -rw-r--r-- 1 boinc boinc      8192 Jun  5 04:52 boinc_mmap_file
[2025-06-05 04:52:52] -rw-r--r-- 1 boinc boinc        27 Jun  5 04:52 wrapper_checkpoint.txt
[2025-06-05 04:52:52] -rw------- 1 boinc boinc      7660 Jun  5 04:52 heartbeat.json
[2025-06-05 04:52:52] -rw------- 1 boinc boinc        95 Jun  5 04:52 pilot_heartbeat.json
[2025-06-05 04:52:52] -rw------- 1 boinc boinc      4357 Jun  5 04:52 pilotlog.txt
[2025-06-05 04:52:52] -rw------- 1 boinc boinc    474057 Jun  5 04:52 log.45006595._056715.job.log.1
[2025-06-05 04:52:52] -rw------- 1 boinc boinc       357 Jun  5 04:52 output.list
[2025-06-05 04:52:52] -rw-r--r-- 1 boinc boinc       620 Jun  5 04:52 runtime_log
[2025-06-05 04:52:52] -rw------- 1 boinc boinc    727040 Jun  5 04:52 result.tar.gz
[2025-06-05 04:52:52] -rw-r--r-- 1 boinc boinc      8753 Jun  5 04:52 runtime_log.err
[2025-06-05 04:52:52] -rw------- 1 boinc boinc       662 Jun  5 04:52 7tLODmaP4g7nsSi4ap6QjLDmwznN0nGgGQJmUXzaDmwznKDmjHUUwm.diag
[2025-06-05 04:52:52] -rw-r--r-- 1 boinc boinc     22055 Jun  5 04:52 stderr.txt
[2025-06-05 04:52:52] HITS file was successfully produced:
[2025-06-05 04:52:52] -rw------- 1 boinc boinc 177546302 Jun  5 04:52 shared/HITS.pool.root.1
[2025-06-05 04:52:52]  *** Contents of shared directory: ***
[2025-06-05 04:52:52] total 387472
[2025-06-05 04:52:52] -rw-r--r-- 2 boinc boinc 217954370 Jun  5 03:31 ATLAS.root_0
[2025-06-05 04:52:52] -rw-r--r-- 2 boinc boinc    508875 Jun  5 03:31 input.tar.gz
[2025-06-05 04:52:52] -rw-r--r-- 2 boinc boinc     15093 Jun  5 03:31 start_atlas.sh
[2025-06-05 04:52:52] -rw------- 1 boinc boinc 177546302 Jun  5 04:52 HITS.pool.root.1
[2025-06-05 04:52:52] -rw------- 1 boinc boinc    727040 Jun  5 04:52 result.tar.gz
04:52:53 (352634): run_atlas exited; CPU time 13851.869238
04:52:53 (352634): called boinc_finish(0)

</stderr_txt>
]]>

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