Name nxdLDm9RPe7n9Rq4apOajLDm4fhM0noT9bVof3QYDmm3SKDm1XYCPm_2
Workunit 232658567
Created 4 Jun 2025, 14:57:18 UTC
Sent 4 Jun 2025, 14:57:24 UTC
Report deadline 12 Jun 2025, 14:57:24 UTC
Received 4 Jun 2025, 16:23:31 UTC
Server state Over
Outcome Success
Client state Done
Exit status 0 (0x00000000)
Computer ID 10821778
Run time 1 hours 20 min 6 sec
CPU time 9 hours 27 min 54 sec
Validate state Valid
Credit 497.48
Device peak FLOPS 43.16 GFLOPS
Application version ATLAS Simulation v3.01 (native_mt)
x86_64-pc-linux-gnu
Peak working set size 2.54 GB
Peak swap size 3.02 GB
Peak disk usage 627.53 MB

Stderr output

<core_client_version>7.7.0</core_client_version>
<![CDATA[
<stderr_txt>
10:57:42 (5685): wrapper (7.7.26015): starting
10:57:42 (5685): wrapper: running run_atlas (--nthreads 8)
[2025-06-04 10:57:42] Arguments: --nthreads 8
[2025-06-04 10:57:42] Threads: 8
[2025-06-04 10:57:42] Checking for CVMFS
[2025-06-04 10:57:42] Probing /cvmfs/atlas.cern.ch... OK
[2025-06-04 10:57:43] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-06-04 10:57:43] Running cvmfs_config stat atlas.cern.ch
[2025-06-04 10:57:43] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-06-04 10:57:43] 2.11.2.0 3213 440768 241552 146783 2 56 14824880 20275200 1 130560 0 130704125 99.991 19310136 18166 http://cvmfs-s1fnal.opensciencegrid.org:8000/cvmfs/atlas.cern.ch http://192.41.237.109:6081 1
[2025-06-04 10:57:43] CVMFS is ok
[2025-06-04 10:57:43] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-06-04 10:57:43] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2025-06-04 10:57:43] Further information can be found at the LHC@home message board.
[2025-06-04 10:57:43] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-06-04 10:57:43] Checking for apptainer binary...
[2025-06-04 10:57:43] Using apptainer found in PATH at /usr/bin/apptainer
[2025-06-04 10:57:43] Running /usr/bin/apptainer --version
[2025-06-04 10:57:43] apptainer version 1.3.2-1.el7
[2025-06-04 10:57:43] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-06-04 10:57:44] c-205-38.aglt2.org
[2025-06-04 10:57:44] apptainer works
[2025-06-04 10:57:44] Set ATHENA_PROC_NUMBER=8
[2025-06-04 10:57:44] Set ATHENA_CORE_NUMBER=8
[2025-06-04 10:57:44] Starting ATLAS job with PandaID=6668191815
[2025-06-04 10:57:44] Running command: /usr/bin/apptainer exec -B /cvmfs,/tmp/boinchome/slots/0 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-06-04 12:17:45]  *** The last 200 lines of the pilot log: ***
[2025-06-04 12:17:45] 2025-06-04 16:17:16,465 | INFO     | executing command: /usr/bin/env mv /tmp/boinchome/slots/0/PanDA_Pilot-6668191815/log.44871837._080041.job.log.tgz.1 /tmp/boinchome/slots/0/log.44871837._080041.job
[2025-06-04 12:17:45] 2025-06-04 16:17:16,483 | INFO     | adding to output.list: log.44871837._080041.job.log.tgz.1 davs://dav.ndgf.org:443/atlas/disk/atlasdatadisk/rucio/mc23_13p6TeV/ac/64/log.44871837._080041.job.log.tg
[2025-06-04 12:17:45] 2025-06-04 16:17:16,483 | INFO     | alt stage-out settings: ['pl', 'write_lan', 'w', 'default'], allow_altstageout=False, remain_files=0, has_altstorage=True
[2025-06-04 12:17:45] 2025-06-04 16:17:16,484 | INFO     | summary of transferred files:
[2025-06-04 12:17:45] 2025-06-04 16:17:16,484 | INFO     |  -- lfn=log.44871837._080041.job.log.tgz.1, status_code=0, status=transferred
[2025-06-04 12:17:45] 2025-06-04 16:17:16,484 | INFO     | stage-out finished correctly
[2025-06-04 12:17:45] 2025-06-04 16:17:16,862 | WARNING  | process 16112 can no longer be monitored (due to stat problems) - aborting
[2025-06-04 12:17:45] 2025-06-04 16:17:16,862 | INFO     | using path: /tmp/boinchome/slots/0/PanDA_Pilot-6668191815/memory_monitor_summary.json (trf name=prmon)
[2025-06-04 12:17:45] 2025-06-04 16:17:16,863 | INFO     | using path: /tmp/boinchome/slots/0/PanDA_Pilot-6668191815/memory_monitor_summary.json (trf name=prmon)
[2025-06-04 12:17:45] 2025-06-04 16:17:16,864 | INFO     | payload log (log.EVNTtoHITS) within allowed size limit (2147483648 B): 3741993 B
[2025-06-04 12:17:45] 2025-06-04 16:17:16,864 | INFO     | payload log (payload.stdout) within allowed size limit (2147483648 B): 16267 B
[2025-06-04 12:17:45] 2025-06-04 16:17:16,864 | INFO     | executing command: df -mP /tmp/boinchome/slots/0
[2025-06-04 12:17:45] 2025-06-04 16:17:16,876 | INFO     | sufficient remaining disk space (33285996544 B)
[2025-06-04 12:17:45] 2025-06-04 16:17:16,876 | INFO     | work directory size check will use 2537553920 B as a max limit (10% grace limit added)
[2025-06-04 12:17:45] 2025-06-04 16:17:16,877 | INFO     | size of work directory /tmp/boinchome/slots/0/PanDA_Pilot-6668191815: 4042172 B (within 2537553920 B limit)
[2025-06-04 12:17:45] 2025-06-04 16:17:16,877 | INFO     | pfn file=/tmp/boinchome/slots/0/PanDA_Pilot-6668191815/HITS.44871837._080041.pool.root.1 does not exist (skip from workdir size calculation)
[2025-06-04 12:17:45] 2025-06-04 16:17:16,877 | INFO     | total size of present files: 0 B (workdir size: 4042172 B)
[2025-06-04 12:17:45] 2025-06-04 16:17:16,877 | INFO     | output file size check: skipping output file /tmp/boinchome/slots/0/PanDA_Pilot-6668191815/HITS.44871837._080041.pool.root.1 since it does not exist
[2025-06-04 12:17:45] 2025-06-04 16:17:16,935 | INFO     | number of running child processes to parent process 16112: 1
[2025-06-04 12:17:45] 2025-06-04 16:17:16,935 | INFO     | maximum number of monitored processes: 6
[2025-06-04 12:17:45] 2025-06-04 16:17:18,803 | INFO     | finished stage-out for finished payload, adding job to finished_jobs queue
[2025-06-04 12:17:45] 2025-06-04 16:17:19,269 | INFO     | PID=9650 has CPU usage=5.9% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i PR -
[2025-06-04 12:17:45] 2025-06-04 16:17:19,438 | INFO     | monitor loop #366: job 0:6668191815 is in state 'finished'
[2025-06-04 12:17:45] 2025-06-04 16:17:19,439 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-06-04 12:17:45] 2025-06-04 16:17:21,823 | INFO     | job 6668191815 has state=finished
[2025-06-04 12:17:45] 2025-06-04 16:17:21,823 | INFO     | preparing for final server update for job 6668191815 in state='finished'
[2025-06-04 12:17:45] 2025-06-04 16:17:21,824 | INFO     | this job has now completed (state=finished)
[2025-06-04 12:17:45] 2025-06-04 16:17:21,824 | INFO     | pilot will not update the server (heartbeat message will be written to file)
[2025-06-04 12:17:45] 2025-06-04 16:17:21,824 | INFO     | log transfer has been attempted: DONE
[2025-06-04 12:17:45] 2025-06-04 16:17:21,824 | INFO     | job 6668191815 has finished - writing final server update
[2025-06-04 12:17:45] 2025-06-04 16:17:21,825 | INFO     | total number of processed events: 400 (read)
[2025-06-04 12:17:45] 2025-06-04 16:17:21,826 | INFO     | executing command: lscpu
[2025-06-04 12:17:45] 2025-06-04 16:17:21,857 | INFO     | executing command: export ATLAS_LOCAL_ROOT_BASE=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase;source ${ATLAS_LOCAL_ROOT_BASE}/user/atlasLocalSetup.sh --quiet;lsetup
[2025-06-04 12:17:45] 2025-06-04 16:17:21,941 | INFO     | monitor loop #367: job 0:6668191815 is in state 'finished'
[2025-06-04 12:17:45] 2025-06-04 16:17:21,942 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-06-04 12:17:45] 2025-06-04 16:17:24,445 | INFO     | monitor loop #368: job 0:6668191815 is in state 'finished'
[2025-06-04 12:17:45] 2025-06-04 16:17:24,445 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-06-04 12:17:45] 2025-06-04 16:17:26,947 | INFO     | monitor loop #369: job 0:6668191815 is in state 'finished'
[2025-06-04 12:17:45] 2025-06-04 16:17:26,947 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-06-04 12:17:45] 2025-06-04 16:17:27,735 | INFO     | CPU arch script returned: x86-64-v3
[2025-06-04 12:17:45] 2025-06-04 16:17:27,735 | INFO     | using path: /tmp/boinchome/slots/0/PanDA_Pilot-6668191815/memory_monitor_summary.json (trf name=prmon)
[2025-06-04 12:17:45] 2025-06-04 16:17:27,736 | INFO     | extracted standard info from prmon json
[2025-06-04 12:17:45] 2025-06-04 16:17:27,736 | INFO     | extracted standard memory fields from prmon json
[2025-06-04 12:17:45] 2025-06-04 16:17:27,737 | WARNING  | GPU info not found in prmon json: 'gpu'
[2025-06-04 12:17:45] 2025-06-04 16:17:27,737 | WARNING  | format EVNTtoHITS has no such key: dbData
[2025-06-04 12:17:45] 2025-06-04 16:17:27,737 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2025-06-04 12:17:45] 2025-06-04 16:17:27,740 | INFO     | fitting pss+swap vs Time
[2025-06-04 12:17:45] 2025-06-04 16:17:27,740 | INFO     | sum of square deviations: 110960220.0
[2025-06-04 12:17:45] 2025-06-04 16:17:27,741 | INFO     | sum of deviations: -3168409296.0
[2025-06-04 12:17:45] 2025-06-04 16:17:27,741 | INFO     | mean x: 1749051543.0
[2025-06-04 12:17:45] 2025-06-04 16:17:27,741 | INFO     | mean y: 2566253.7464788733
[2025-06-04 12:17:45] 2025-06-04 16:17:27,741 | INFO     | -- intersect: 49945790663.57861
[2025-06-04 12:17:45] 2025-06-04 16:17:27,741 | INFO     | intersect: 49945790663.57861
[2025-06-04 12:17:45] 2025-06-04 16:17:27,741 | INFO     | chi2: 0.0723956158889872
[2025-06-04 12:17:45] 2025-06-04 16:17:27,742 | INFO     | -- intersect: 49945790663.57861
[2025-06-04 12:17:45] 2025-06-04 16:17:27,742 | INFO     | current memory leak: -28.55 B/s (using 71 data points, chi2=0.07)
[2025-06-04 12:17:45] 2025-06-04 16:17:27,742 | INFO     | ..............................
[2025-06-04 12:17:45] 2025-06-04 16:17:27,742 | INFO     | . Timing measurements:
[2025-06-04 12:17:45] 2025-06-04 16:17:27,742 | INFO     | . get job = 0 s
[2025-06-04 12:17:45] 2025-06-04 16:17:27,743 | INFO     | . initial setup = 2 s
[2025-06-04 12:17:45] 2025-06-04 16:17:27,743 | INFO     | . payload setup = 8 s
[2025-06-04 12:17:45] 2025-06-04 16:17:27,743 | INFO     | . stage-in = 0 s
[2025-06-04 12:17:45] 2025-06-04 16:17:27,743 | INFO     | . payload execution = 4731 s
[2025-06-04 12:17:45] 2025-06-04 16:17:27,743 | INFO     | . stage-out = 0 s
[2025-06-04 12:17:45] 2025-06-04 16:17:27,743 | INFO     | . log creation = 0 s
[2025-06-04 12:17:45] 2025-06-04 16:17:27,743 | INFO     | ..............................
[2025-06-04 12:17:45] 2025-06-04 16:17:27,828 | INFO     | 
[2025-06-04 12:17:45] 2025-06-04 16:17:27,828 | INFO     | job summary report
[2025-06-04 12:17:45] 2025-06-04 16:17:27,828 | INFO     | --------------------------------------------------
[2025-06-04 12:17:45] 2025-06-04 16:17:27,828 | INFO     | PanDA job id: 6668191815
[2025-06-04 12:17:45] 2025-06-04 16:17:27,828 | INFO     | task id: 44871837
[2025-06-04 12:17:45] 2025-06-04 16:17:27,829 | INFO     | errors: (none)
[2025-06-04 12:17:45] 2025-06-04 16:17:27,829 | INFO     | status: LOG_TRANSFER = DONE 
[2025-06-04 12:17:45] 2025-06-04 16:17:27,829 | INFO     | pilot state: finished 
[2025-06-04 12:17:45] 2025-06-04 16:17:27,829 | INFO     | transexitcode: 0
[2025-06-04 12:17:45] 2025-06-04 16:17:27,829 | INFO     | exeerrorcode: 0
[2025-06-04 12:17:45] 2025-06-04 16:17:27,829 | INFO     | exeerrordiag: 
[2025-06-04 12:17:45] 2025-06-04 16:17:27,829 | INFO     | exitcode: 0
[2025-06-04 12:17:45] 2025-06-04 16:17:27,829 | INFO     | exitmsg: OK
[2025-06-04 12:17:45] 2025-06-04 16:17:27,829 | INFO     | cpuconsumptiontime: 34004 s
[2025-06-04 12:17:45] 2025-06-04 16:17:27,830 | INFO     | nevents: 400
[2025-06-04 12:17:45] 2025-06-04 16:17:27,830 | INFO     | neventsw: 0
[2025-06-04 12:17:45] 2025-06-04 16:17:27,830 | INFO     | pid: 16112
[2025-06-04 12:17:45] 2025-06-04 16:17:27,830 | INFO     | pgrp: 16112
[2025-06-04 12:17:45] 2025-06-04 16:17:27,830 | INFO     | corecount: 8
[2025-06-04 12:17:45] 2025-06-04 16:17:27,830 | INFO     | event service: False
[2025-06-04 12:17:45] 2025-06-04 16:17:27,830 | INFO     | sizes: {0: 2397391, 5: 2397597, 11: 2397653, 4743: 2423846, 4744: 2432787, 4746: 2432871, 4755: 2433169}
[2025-06-04 12:17:45] 2025-06-04 16:17:27,830 | INFO     | --------------------------------------------------
[2025-06-04 12:17:45] 2025-06-04 16:17:27,830 | INFO     | 
[2025-06-04 12:17:45] 2025-06-04 16:17:27,831 | INFO     | executing command: ls -lF /tmp/boinchome/slots/0
[2025-06-04 12:17:45] 2025-06-04 16:17:27,849 | INFO     | queue jobs had 0 job(s) [purged]
[2025-06-04 12:17:45] 2025-06-04 16:17:27,850 | INFO     | queue payloads had 0 job(s) [purged]
[2025-06-04 12:17:45] 2025-06-04 16:17:27,850 | INFO     | queue data_in had 0 job(s) [purged]
[2025-06-04 12:17:45] 2025-06-04 16:17:27,850 | INFO     | queue data_out had 0 job(s) [purged]
[2025-06-04 12:17:45] 2025-06-04 16:17:27,850 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-06-04 12:17:45] 2025-06-04 16:17:27,850 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-06-04 12:17:45] 2025-06-04 16:17:27,851 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-06-04 12:17:45] 2025-06-04 16:17:27,851 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-06-04 12:17:45] 2025-06-04 16:17:27,851 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-06-04 12:17:45] 2025-06-04 16:17:27,851 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-06-04 12:17:45] 2025-06-04 16:17:27,851 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-06-04 12:17:45] 2025-06-04 16:17:27,851 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-06-04 12:17:45] 2025-06-04 16:17:27,851 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-06-04 12:17:45] 2025-06-04 16:17:27,851 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-06-04 12:17:45] 2025-06-04 16:17:27,851 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-06-04 12:17:45] 2025-06-04 16:17:27,852 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-06-04 12:17:45] 2025-06-04 16:17:27,852 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-06-04 12:17:45] 2025-06-04 16:17:27,852 | INFO     | queue completed_jobids has 1 job(s)
[2025-06-04 12:17:45] 2025-06-04 16:17:27,852 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-06-04 12:17:45] 2025-06-04 16:17:27,852 | INFO     | queue messages had 0 job(s) [purged]
[2025-06-04 12:17:45] 2025-06-04 16:17:27,852 | INFO     | job 6668191815 has completed (purged errors)
[2025-06-04 12:17:45] 2025-06-04 16:17:27,852 | INFO     | overall cleanup function is called
[2025-06-04 12:17:45] 2025-06-04 16:17:28,860 | INFO     | --- collectZombieJob: --- 10, [16112]
[2025-06-04 12:17:45] 2025-06-04 16:17:28,861 | INFO     | zombie collector waiting for pid 16112
[2025-06-04 12:17:45] 2025-06-04 16:17:28,861 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-06-04 12:17:45] 2025-06-04 16:17:28,861 | INFO     | collected zombie processes
[2025-06-04 12:17:45] 2025-06-04 16:17:28,861 | INFO     | will attempt to kill all subprocesses of pid=16112
[2025-06-04 12:17:45] 2025-06-04 16:17:28,965 | INFO     | process IDs to be killed: [16112] (in reverse order)
[2025-06-04 12:17:45] 2025-06-04 16:17:29,013 | WARNING  | found no corresponding commands to process id(s)
[2025-06-04 12:17:45] 2025-06-04 16:17:29,014 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-06-04 12:17:45] 2025-06-04 16:17:29,017 | INFO     | did not find any defunct processes belonging to 16112
[2025-06-04 12:17:45] 2025-06-04 16:17:29,019 | INFO     | did not find any defunct processes belonging to 16112
[2025-06-04 12:17:45] 2025-06-04 16:17:29,019 | INFO     | ready for new job
[2025-06-04 12:17:45] 2025-06-04 16:17:29,020 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-06-04 12:17:45] 2025-06-04 16:17:29,021 | INFO     | **************************************
[2025-06-04 12:17:45] 2025-06-04 16:17:29,022 | INFO     | ***  PanDA Pilot version 3.10.2.2  ***
[2025-06-04 12:17:45] 2025-06-04 16:17:29,022 | INFO     | **************************************
[2025-06-04 12:17:45] 2025-06-04 16:17:29,022 | INFO     | 
[2025-06-04 12:17:45] 2025-06-04 16:17:29,023 | INFO     | architecture information:
[2025-06-04 12:17:45] 2025-06-04 16:17:29,023 | INFO     | executing command: cat /etc/os-release
[2025-06-04 12:17:45] 2025-06-04 16:17:29,036 | INFO     | cat /etc/os-release:
[2025-06-04 12:17:45] NAME="CentOS Linux"
[2025-06-04 12:17:45] VERSION="7 (Core)"
[2025-06-04 12:17:45] ID="centos"
[2025-06-04 12:17:45] ID_LIKE="rhel fedora"
[2025-06-04 12:17:45] VERSION_ID="7"
[2025-06-04 12:17:45] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-06-04 12:17:45] ANSI_COLOR="0;31"
[2025-06-04 12:17:45] CPE_NAME="cpe:/o:centos:centos:7"
[2025-06-04 12:17:45] HOME_URL="https://www.centos.org/"
[2025-06-04 12:17:45] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-06-04 12:17:45] 
[2025-06-04 12:17:45] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-06-04 12:17:45] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-06-04 12:17:45] REDHAT_SUPPORT_PRODUCT="centos"
[2025-06-04 12:17:45] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-06-04 12:17:45] 
[2025-06-04 12:17:45] 2025-06-04 16:17:29,037 | INFO     | **************************************
[2025-06-04 12:17:45] 2025-06-04 16:17:29,540 | INFO     | executing command: df -mP /tmp/boinchome/slots/0
[2025-06-04 12:17:45] 2025-06-04 16:17:29,555 | INFO     | sufficient remaining disk space (33290190848 B)
[2025-06-04 12:17:45] 2025-06-04 16:17:29,555 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-06-04 12:17:45] 2025-06-04 16:17:29,556 | INFO     | current server update state: UPDATING_FINAL
[2025-06-04 12:17:45] 2025-06-04 16:17:29,556 | INFO     | update_server=False
[2025-06-04 12:17:45] 2025-06-04 16:17:29,556 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-06-04 12:17:45] 2025-06-04 16:17:29,556 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-06-04 12:17:45] 2025-06-04 16:17:29,556 | WARNING  | aborting monitor loop since graceful_stop has been set (timing out remaining threads)
[2025-06-04 12:17:45] 2025-06-04 16:17:29,557 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-06-04 12:17:45] 2025-06-04 16:17:29,557 | INFO     | found 0 job(s) in 20 queues
[2025-06-04 12:17:45] 2025-06-04 16:17:29,558 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-06-04 12:17:45] 2025-06-04 16:17:29,558 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-06-04 12:17:45] 2025-06-04 16:17:29,559 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-06-04 12:17:45] 2025-06-04 16:17:29,730 | INFO     | all data control threads have been joined
[2025-06-04 12:17:45] 2025-06-04 16:17:30,114 | INFO     | all payload control threads have been joined
[2025-06-04 12:17:45] 2025-06-04 16:17:30,456 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-06-04 12:17:45] 2025-06-04 16:17:30,456 | INFO     | aborting loop
[2025-06-04 12:17:45] 2025-06-04 16:17:30,561 | INFO     | [job] retrieve thread has finished
[2025-06-04 12:17:45] 2025-06-04 16:17:30,562 | INFO     | [job] queue monitor thread has finished
[2025-06-04 12:17:45] 2025-06-04 16:17:30,736 | INFO     | [data] control thread has finished
[2025-06-04 12:17:45] 2025-06-04 16:17:31,119 | INFO     | [payload] control thread has finished
[2025-06-04 12:17:45] 2025-06-04 16:17:31,140 | INFO     | all job control threads have been joined
[2025-06-04 12:17:45] 2025-06-04 16:17:31,267 | INFO     | [payload] validate_post thread has finished
[2025-06-04 12:17:45] 2025-06-04 16:17:31,461 | INFO     | [job] job monitor thread has finished
[2025-06-04 12:17:45] 2025-06-04 16:17:31,462 | INFO     | [payload] failed_post thread has finished
[2025-06-04 12:17:45] 2025-06-04 16:17:31,564 | INFO     | [data] copytool_out thread has finished
[2025-06-04 12:17:45] 2025-06-04 16:17:31,700 | INFO     | [job] validate thread has finished
[2025-06-04 12:17:45] 2025-06-04 16:17:31,793 | INFO     | [payload] execute_payloads thread has finished
[2025-06-04 12:17:45] 2025-06-04 16:17:31,946 | INFO     | [payload] validate_pre thread has finished
[2025-06-04 12:17:45] 2025-06-04 16:17:31,950 | INFO     | [job] create_data_payload thread has finished
[2025-06-04 12:17:45] 2025-06-04 16:17:31,951 | INFO     | [data] copytool_in thread has finished
[2025-06-04 12:17:45] 2025-06-04 16:17:32,145 | INFO     | [job] control thread has finished
[2025-06-04 12:17:45] 2025-06-04 16:17:33,563 | INFO     | [data] queue_monitor thread has finished
[2025-06-04 12:17:45] 2025-06-04 16:17:39,657 | INFO     | job.realtimelogging is not enabled
[2025-06-04 12:17:45] 2025-06-04 16:17:40,663 | INFO     | [payload] run_realtimelog thread has finished
[2025-06-04 12:17:45] 2025-06-04 16:17:40,666 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140480325887808)>', '<ExcThread(monitor, started 140479588988672)>']
[2025-06-04 12:17:45] 2025-06-04 16:17:41,618 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-06-04 12:17:45] 2025-06-04 16:17:41,619 | INFO     | [monitor] control thread has ended
[2025-06-04 12:17:45] 2025-06-04 16:17:45,691 | INFO     | all workflow threads have been joined
[2025-06-04 12:17:45] 2025-06-04 16:17:45,691 | INFO     | end of generic workflow (traces error code: 0)
[2025-06-04 12:17:45] 2025-06-04 16:17:45,692 | INFO     | traces error code: 0
[2025-06-04 12:17:45] 2025-06-04 16:17:45,692 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-06-04 12:17:45] 2025-06-04 16:17:45,780 [wrapper] ==== pilot stdout END ====
[2025-06-04 12:17:45] 2025-06-04 16:17:45,783 [wrapper] ==== wrapper stdout RESUME ====
[2025-06-04 12:17:45] 2025-06-04 16:17:45,787 [wrapper] pilotpid: 9650
[2025-06-04 12:17:45] 2025-06-04 16:17:45,790 [wrapper] Pilot exit status: 0
[2025-06-04 12:17:45] 2025-06-04 16:17:45,801 [wrapper] pandaids: 6668191815
[2025-06-04 12:17:45] 2025-06-04 16:17:45,834 [wrapper] cleanup supervisor_pilot 13027 9651
[2025-06-04 12:17:45] 2025-06-04 16:17:45,837 [wrapper] Test setup, not cleaning
[2025-06-04 12:17:45] 2025-06-04 16:17:45,841 [wrapper] apfmon messages muted
[2025-06-04 12:17:45] 2025-06-04 16:17:45,844 [wrapper] ==== wrapper stdout END ====
[2025-06-04 12:17:45] 2025-06-04 16:17:45,847 [wrapper] ==== wrapper stderr END ====
[2025-06-04 12:17:45]  *** Error codes and diagnostics ***
[2025-06-04 12:17:45]     "exeErrorCode": 0,
[2025-06-04 12:17:45]     "exeErrorDiag": "",
[2025-06-04 12:17:45]     "pilotErrorCode": 0,
[2025-06-04 12:17:45]     "pilotErrorDiag": "",
[2025-06-04 12:17:45]  *** Listing of results directory ***
[2025-06-04 12:17:45] total 422256
[2025-06-04 12:17:45] -rw-r--r-- 1 boincer umatlas    495897 May 28 01:33 pilot3.tar.gz
[2025-06-04 12:17:45] -rw-r--r-- 1 boincer umatlas      5111 May 28 02:25 queuedata.json
[2025-06-04 12:17:45] -rwx------ 1 boincer umatlas     37140 May 28 02:28 runpilot2-wrapper.sh
[2025-06-04 12:17:45] -rw-r--r-- 1 boincer umatlas       100 Jun  4 10:57 wrapper_26015_x86_64-pc-linux-gnu
[2025-06-04 12:17:45] -rwxr-xr-x 1 boincer umatlas      7986 Jun  4 10:57 run_atlas
[2025-06-04 12:17:45] -rw-r--r-- 1 boincer umatlas       105 Jun  4 10:57 job.xml
[2025-06-04 12:17:45] -rw-r--r-- 2 boincer umatlas 223999319 Jun  4 10:57 EVNT.44871834._003125.pool.root.1
[2025-06-04 12:17:45] -rw-r--r-- 2 boincer umatlas     15093 Jun  4 10:57 start_atlas.sh
[2025-06-04 12:17:45] drwxrwx--x 2 boincer umatlas      4096 Jun  4 10:57 shared
[2025-06-04 12:17:45] -rw-r--r-- 2 boincer umatlas    508880 Jun  4 10:57 input.tar.gz
[2025-06-04 12:17:45] -rw-r--r-- 1 boincer umatlas         0 Jun  4 10:57 boinc_lockfile
[2025-06-04 12:17:45] -rw-r--r-- 1 boincer umatlas      2558 Jun  4 10:57 pandaJob.out
[2025-06-04 12:17:45] -rw------- 1 boincer umatlas    987207 Jun  4 10:57 agis_schedconf.cvmfs.json
[2025-06-04 12:17:45] -rw------- 1 boincer umatlas   1598969 Jun  4 10:57 agis_ddmendpoints.agis.ALL.json
[2025-06-04 12:17:45] drwx------ 4 boincer umatlas      4096 Jun  4 10:57 pilot3
[2025-06-04 12:17:45] -rw-r--r-- 1 boincer umatlas      6051 Jun  4 12:13 init_data.xml
[2025-06-04 12:17:45] -rw------- 1 boincer umatlas 202996994 Jun  4 12:16 HITS.44871837._080041.pool.root.1
[2025-06-04 12:17:45] -rw-r--r-- 1 boincer umatlas       529 Jun  4 12:17 boinc_task_state.xml
[2025-06-04 12:17:45] -rw------- 1 boincer umatlas      1041 Jun  4 12:17 memory_monitor_summary.json
[2025-06-04 12:17:45] -rw------- 1 boincer umatlas    320706 Jun  4 12:17 log.44871837._080041.job.log.tgz.1
[2025-06-04 12:17:45] -rw------- 1 boincer umatlas      7732 Jun  4 12:17 heartbeat.json
[2025-06-04 12:17:45] -rw------- 1 boincer umatlas        95 Jun  4 12:17 pilot_heartbeat.json
[2025-06-04 12:17:45] -rw-r--r-- 1 boincer umatlas        27 Jun  4 12:17 wrapper_checkpoint.txt
[2025-06-04 12:17:45] -rw-r--r-- 1 boincer umatlas      8192 Jun  4 12:17 boinc_mmap_file
[2025-06-04 12:17:45] -rw------- 1 boincer umatlas      4548 Jun  4 12:17 pilotlog.txt
[2025-06-04 12:17:45] -rw------- 1 boincer umatlas    460415 Jun  4 12:17 log.44871837._080041.job.log.1
[2025-06-04 12:17:45] -rw------- 1 boincer umatlas       357 Jun  4 12:17 output.list
[2025-06-04 12:17:45] -rw-r--r-- 1 boincer umatlas       620 Jun  4 12:17 runtime_log
[2025-06-04 12:17:45] -rw------- 1 boincer umatlas    798720 Jun  4 12:17 result.tar.gz
[2025-06-04 12:17:45] -rw-r--r-- 1 boincer umatlas      8659 Jun  4 12:17 runtime_log.err
[2025-06-04 12:17:45] -rw------- 1 boincer umatlas       657 Jun  4 12:17 nxdLDm9RPe7n9Rq4apOajLDm4fhM0noT9bVof3QYDmm3SKDm1XYCPm.diag
[2025-06-04 12:17:45] -rw-r--r-- 1 boincer umatlas     22657 Jun  4 12:17 stderr.txt
[2025-06-04 12:17:45] HITS file was successfully produced:
[2025-06-04 12:17:45] -rw------- 1 boincer umatlas 202996994 Jun  4 12:16 shared/HITS.pool.root.1
[2025-06-04 12:17:45]  *** Contents of shared directory: ***
[2025-06-04 12:17:45] total 418292
[2025-06-04 12:17:45] -rw-r--r-- 2 boincer umatlas 223999319 Jun  4 10:57 ATLAS.root_0
[2025-06-04 12:17:45] -rw-r--r-- 2 boincer umatlas     15093 Jun  4 10:57 start_atlas.sh
[2025-06-04 12:17:45] -rw-r--r-- 2 boincer umatlas    508880 Jun  4 10:57 input.tar.gz
[2025-06-04 12:17:45] -rw------- 1 boincer umatlas 202996994 Jun  4 12:16 HITS.pool.root.1
[2025-06-04 12:17:45] -rw------- 1 boincer umatlas    798720 Jun  4 12:17 result.tar.gz
12:17:47 (5685): run_atlas exited; CPU time 33906.825389
12:17:47 (5685): called boinc_finish(0)

</stderr_txt>
]]>


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