Stderr output

<core_client_version>7.7.0</core_client_version>
<![CDATA[
<stderr_txt>
10:57:03 (30540): wrapper (7.7.26015): starting
10:57:03 (30540): wrapper: running run_atlas (--nthreads 8)
[2025-06-04 10:57:03] Arguments: --nthreads 8
[2025-06-04 10:57:03] Threads: 8
[2025-06-04 10:57:03] Checking for CVMFS
[2025-06-04 10:57:03] Probing /cvmfs/atlas.cern.ch... OK
[2025-06-04 10:57:03] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-06-04 10:57:03] Running cvmfs_config stat atlas.cern.ch
[2025-06-04 10:57:04] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-06-04 10:57:04] 2.11.2.0 29495 108007 315428 146783 3 430 13594433 18432001 6281 130560 0 276141708 98.773 735955423 37228 http://cvmfs-s1fnal.opensciencegrid.org:8000/cvmfs/atlas.cern.ch http://192.41.237.109:6081 1
[2025-06-04 10:57:04] CVMFS is ok
[2025-06-04 10:57:04] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-06-04 10:57:04] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2025-06-04 10:57:04] Further information can be found at the LHC@home message board.
[2025-06-04 10:57:04] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-06-04 10:57:04] Checking for apptainer binary...
[2025-06-04 10:57:04] Using apptainer found in PATH at /usr/bin/apptainer
[2025-06-04 10:57:04] Running /usr/bin/apptainer --version
[2025-06-04 10:57:04] apptainer version 1.3.2-1.el7
[2025-06-04 10:57:04] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-06-04 10:57:04] c-211-7.aglt2.org
[2025-06-04 10:57:04] apptainer works
[2025-06-04 10:57:04] Set ATHENA_PROC_NUMBER=8
[2025-06-04 10:57:04] Set ATHENA_CORE_NUMBER=8
[2025-06-04 10:57:04] Starting ATLAS job with PandaID=6679801630
[2025-06-04 10:57:04] Running command: /usr/bin/apptainer exec -B /cvmfs,/tmp/boinchome/slots/2 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-06-04 12:28:45]  *** The last 200 lines of the pilot log: ***
[2025-06-04 12:28:45]  filesize=330146
[2025-06-04 12:28:45]  filetype=log
[2025-06-04 12:28:45]  guid=91be9f69-f90c-41b8-a686-dcf9134447f3
[2025-06-04 12:28:45]  inputddms=['NDGF-T1_DATADISK', 'CERN-PROD_DATADISK']
[2025-06-04 12:28:45]  is_altstaged=None
[2025-06-04 12:28:45]  is_tar=False
[2025-06-04 12:28:45]  lfn=log.45006595._056739.job.log.tgz.1
[2025-06-04 12:28:45]  mtime=0
[2025-06-04 12:28:45]  protocol_id=None
[2025-06-04 12:28:45]  protocols=[{'endpoint': 'davs://dav.ndgf.org:443', 'flavour': 'WEBDAV', 'id': 331, 'path': '/atlas/disk/atlasdatadisk/rucio/'}]
[2025-06-04 12:28:45]  replicas=None
[2025-06-04 12:28:45]  scope=mc23_13p6TeV
[2025-06-04 12:28:45]  status=None
[2025-06-04 12:28:45]  status_code=0
[2025-06-04 12:28:45]  storage_token=
[2025-06-04 12:28:45]  surl=/tmp/boinchome/slots/2/PanDA_Pilot-6679801630/log.45006595._056739.job.log.tgz.1
[2025-06-04 12:28:45]  turl=davs://dav.ndgf.org:443/atlas/disk/atlasdatadisk/rucio/mc23_13p6TeV/22/7c/log.45006595._056739.job.log.tgz.1
[2025-06-04 12:28:45]  workdir=None
[2025-06-04 12:28:45] ]
[2025-06-04 12:28:45] 2025-06-04 16:28:28,870 | INFO     | transferring file log.45006595._056739.job.log.tgz.1 from /tmp/boinchome/slots/2/PanDA_Pilot-6679801630/log.45006595._056739.job.log.tgz.1 to /tmp/boinchome/slots/
[2025-06-04 12:28:45] 2025-06-04 16:28:28,870 | INFO     | executing command: /usr/bin/env mv /tmp/boinchome/slots/2/PanDA_Pilot-6679801630/log.45006595._056739.job.log.tgz.1 /tmp/boinchome/slots/2/log.45006595._056739.job
[2025-06-04 12:28:45] 2025-06-04 16:28:28,885 | INFO     | adding to output.list: log.45006595._056739.job.log.tgz.1 davs://dav.ndgf.org:443/atlas/disk/atlasdatadisk/rucio/mc23_13p6TeV/22/7c/log.45006595._056739.job.log.tg
[2025-06-04 12:28:45] 2025-06-04 16:28:28,886 | INFO     | alt stage-out settings: ['pl', 'write_lan', 'w', 'default'], allow_altstageout=False, remain_files=0, has_altstorage=True
[2025-06-04 12:28:45] 2025-06-04 16:28:28,886 | INFO     | summary of transferred files:
[2025-06-04 12:28:45] 2025-06-04 16:28:28,886 | INFO     |  -- lfn=log.45006595._056739.job.log.tgz.1, status_code=0, status=transferred
[2025-06-04 12:28:45] 2025-06-04 16:28:28,886 | INFO     | stage-out finished correctly
[2025-06-04 12:28:45] 2025-06-04 16:28:28,941 | INFO     | finished stage-out for finished payload, adding job to finished_jobs queue
[2025-06-04 12:28:45] 2025-06-04 16:28:29,115 | INFO     | job 6679801630 has state=finished
[2025-06-04 12:28:45] 2025-06-04 16:28:29,115 | INFO     | preparing for final server update for job 6679801630 in state='finished'
[2025-06-04 12:28:45] 2025-06-04 16:28:29,192 | INFO     | sent prmon JSON dictionary to logstash server (urllib method)
[2025-06-04 12:28:45] 2025-06-04 16:28:29,192 | INFO     | this job has now completed (state=finished)
[2025-06-04 12:28:45] 2025-06-04 16:28:29,193 | INFO     | pilot will not update the server (heartbeat message will be written to file)
[2025-06-04 12:28:45] 2025-06-04 16:28:29,193 | INFO     | log transfer has been attempted: DONE
[2025-06-04 12:28:45] 2025-06-04 16:28:29,193 | INFO     | job 6679801630 has finished - writing final server update
[2025-06-04 12:28:45] 2025-06-04 16:28:29,193 | INFO     | total number of processed events: 400 (read)
[2025-06-04 12:28:45] 2025-06-04 16:28:29,196 | INFO     | executing command: lscpu
[2025-06-04 12:28:45] 2025-06-04 16:28:29,239 | INFO     | executing command: export ATLAS_LOCAL_ROOT_BASE=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase;source ${ATLAS_LOCAL_ROOT_BASE}/user/atlasLocalSetup.sh --quiet;lsetup
[2025-06-04 12:28:45] 2025-06-04 16:28:30,749 | INFO     | PID=35039 has CPU usage=8.6% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i PR 
[2025-06-04 12:28:45] 2025-06-04 16:28:30,750 | INFO     | .. there are 7 such processes running
[2025-06-04 12:28:45] 2025-06-04 16:28:31,184 | INFO     | monitor loop #422: job 0:6679801630 is in state 'finished'
[2025-06-04 12:28:45] 2025-06-04 16:28:31,185 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-06-04 12:28:45] 2025-06-04 16:28:32,120 | INFO     | CPU arch script returned: x86-64-v3
[2025-06-04 12:28:45] 2025-06-04 16:28:32,121 | INFO     | using path: /tmp/boinchome/slots/2/PanDA_Pilot-6679801630/memory_monitor_summary.json (trf name=prmon)
[2025-06-04 12:28:45] 2025-06-04 16:28:32,122 | INFO     | extracted standard info from prmon json
[2025-06-04 12:28:45] 2025-06-04 16:28:32,122 | INFO     | extracted standard memory fields from prmon json
[2025-06-04 12:28:45] 2025-06-04 16:28:32,122 | WARNING  | GPU info not found in prmon json: 'gpu'
[2025-06-04 12:28:45] 2025-06-04 16:28:32,123 | WARNING  | format EVNTtoHITS has no such key: dbData
[2025-06-04 12:28:45] 2025-06-04 16:28:32,123 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2025-06-04 12:28:45] 2025-06-04 16:28:32,125 | INFO     | fitting pss+swap vs Time
[2025-06-04 12:28:45] 2025-06-04 16:28:32,126 | INFO     | sum of square deviations: 170944600.5
[2025-06-04 12:28:45] 2025-06-04 16:28:32,126 | INFO     | sum of deviations: -5180172521.000001
[2025-06-04 12:28:45] 2025-06-04 16:28:32,126 | INFO     | mean x: 1749051899.5
[2025-06-04 12:28:45] 2025-06-04 16:28:32,126 | INFO     | mean y: 2522451.536585366
[2025-06-04 12:28:45] 2025-06-04 16:28:32,126 | INFO     | -- intersect: 53004433954.39657
[2025-06-04 12:28:45] 2025-06-04 16:28:32,126 | INFO     | intersect: 53004433954.39657
[2025-06-04 12:28:45] 2025-06-04 16:28:32,127 | INFO     | chi2: 0.075578169823848
[2025-06-04 12:28:45] 2025-06-04 16:28:32,127 | INFO     | -- intersect: 53004433954.39657
[2025-06-04 12:28:45] 2025-06-04 16:28:32,127 | INFO     | current memory leak: -30.30 B/s (using 82 data points, chi2=0.08)
[2025-06-04 12:28:45] 2025-06-04 16:28:32,128 | INFO     | ..............................
[2025-06-04 12:28:45] 2025-06-04 16:28:32,128 | INFO     | . Timing measurements:
[2025-06-04 12:28:45] 2025-06-04 16:28:32,128 | INFO     | . get job = 0 s
[2025-06-04 12:28:45] 2025-06-04 16:28:32,128 | INFO     | . initial setup = 2 s
[2025-06-04 12:28:45] 2025-06-04 16:28:32,128 | INFO     | . payload setup = 23 s
[2025-06-04 12:28:45] 2025-06-04 16:28:32,128 | INFO     | . stage-in = 0 s
[2025-06-04 12:28:45] 2025-06-04 16:28:32,128 | INFO     | . payload execution = 5400 s
[2025-06-04 12:28:45] 2025-06-04 16:28:32,128 | INFO     | . stage-out = 0 s
[2025-06-04 12:28:45] 2025-06-04 16:28:32,128 | INFO     | . log creation = 0 s
[2025-06-04 12:28:45] 2025-06-04 16:28:32,128 | INFO     | ..............................
[2025-06-04 12:28:45] 2025-06-04 16:28:32,235 | INFO     | 
[2025-06-04 12:28:45] 2025-06-04 16:28:32,236 | INFO     | job summary report
[2025-06-04 12:28:45] 2025-06-04 16:28:32,236 | INFO     | --------------------------------------------------
[2025-06-04 12:28:45] 2025-06-04 16:28:32,236 | INFO     | PanDA job id: 6679801630
[2025-06-04 12:28:45] 2025-06-04 16:28:32,236 | INFO     | task id: 45006595
[2025-06-04 12:28:45] 2025-06-04 16:28:32,236 | INFO     | errors: (none)
[2025-06-04 12:28:45] 2025-06-04 16:28:32,236 | INFO     | status: LOG_TRANSFER = DONE 
[2025-06-04 12:28:45] 2025-06-04 16:28:32,236 | INFO     | pilot state: finished 
[2025-06-04 12:28:45] 2025-06-04 16:28:32,236 | INFO     | transexitcode: 0
[2025-06-04 12:28:45] 2025-06-04 16:28:32,236 | INFO     | exeerrorcode: 0
[2025-06-04 12:28:45] 2025-06-04 16:28:32,236 | INFO     | exeerrordiag: 
[2025-06-04 12:28:45] 2025-06-04 16:28:32,236 | INFO     | exitcode: 0
[2025-06-04 12:28:45] 2025-06-04 16:28:32,236 | INFO     | exitmsg: OK
[2025-06-04 12:28:45] 2025-06-04 16:28:32,237 | INFO     | cpuconsumptiontime: 38765 s
[2025-06-04 12:28:45] 2025-06-04 16:28:32,237 | INFO     | nevents: 400
[2025-06-04 12:28:45] 2025-06-04 16:28:32,237 | INFO     | neventsw: 0
[2025-06-04 12:28:45] 2025-06-04 16:28:32,237 | INFO     | pid: 43249
[2025-06-04 12:28:45] 2025-06-04 16:28:32,237 | INFO     | pgrp: 43249
[2025-06-04 12:28:45] 2025-06-04 16:28:32,237 | INFO     | corecount: 8
[2025-06-04 12:28:45] 2025-06-04 16:28:32,237 | INFO     | event service: False
[2025-06-04 12:28:45] 2025-06-04 16:28:32,237 | INFO     | sizes: {0: 2397171, 1: 2397313, 11: 2397547, 22: 2397547, 5427: 2424053, 5428: 2433177, 5429: 2433177, 5432: 2433347}
[2025-06-04 12:28:45] 2025-06-04 16:28:32,237 | INFO     | --------------------------------------------------
[2025-06-04 12:28:45] 2025-06-04 16:28:32,237 | INFO     | 
[2025-06-04 12:28:45] 2025-06-04 16:28:32,237 | INFO     | executing command: ls -lF /tmp/boinchome/slots/2
[2025-06-04 12:28:45] 2025-06-04 16:28:32,252 | INFO     | queue jobs had 0 job(s) [purged]
[2025-06-04 12:28:45] 2025-06-04 16:28:32,252 | INFO     | queue payloads had 0 job(s) [purged]
[2025-06-04 12:28:45] 2025-06-04 16:28:32,252 | INFO     | queue data_in had 0 job(s) [purged]
[2025-06-04 12:28:45] 2025-06-04 16:28:32,252 | INFO     | queue data_out had 0 job(s) [purged]
[2025-06-04 12:28:45] 2025-06-04 16:28:32,252 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-06-04 12:28:45] 2025-06-04 16:28:32,252 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-06-04 12:28:45] 2025-06-04 16:28:32,252 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-06-04 12:28:45] 2025-06-04 16:28:32,252 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-06-04 12:28:45] 2025-06-04 16:28:32,252 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-06-04 12:28:45] 2025-06-04 16:28:32,252 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-06-04 12:28:45] 2025-06-04 16:28:32,253 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-06-04 12:28:45] 2025-06-04 16:28:32,253 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-06-04 12:28:45] 2025-06-04 16:28:32,253 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-06-04 12:28:45] 2025-06-04 16:28:32,253 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-06-04 12:28:45] 2025-06-04 16:28:32,253 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-06-04 12:28:45] 2025-06-04 16:28:32,253 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-06-04 12:28:45] 2025-06-04 16:28:32,253 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-06-04 12:28:45] 2025-06-04 16:28:32,253 | INFO     | queue completed_jobids has 1 job(s)
[2025-06-04 12:28:45] 2025-06-04 16:28:32,253 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-06-04 12:28:45] 2025-06-04 16:28:32,253 | INFO     | queue messages had 0 job(s) [purged]
[2025-06-04 12:28:45] 2025-06-04 16:28:32,254 | INFO     | job 6679801630 has completed (purged errors)
[2025-06-04 12:28:45] 2025-06-04 16:28:32,254 | INFO     | overall cleanup function is called
[2025-06-04 12:28:45] 2025-06-04 16:28:33,257 | INFO     | --- collectZombieJob: --- 10, [43249]
[2025-06-04 12:28:45] 2025-06-04 16:28:33,257 | INFO     | zombie collector waiting for pid 43249
[2025-06-04 12:28:45] 2025-06-04 16:28:33,258 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-06-04 12:28:45] 2025-06-04 16:28:33,258 | INFO     | collected zombie processes
[2025-06-04 12:28:45] 2025-06-04 16:28:33,258 | INFO     | will attempt to kill all subprocesses of pid=43249
[2025-06-04 12:28:45] 2025-06-04 16:28:33,422 | INFO     | process IDs to be killed: [43249] (in reverse order)
[2025-06-04 12:28:45] 2025-06-04 16:28:33,487 | WARNING  | found no corresponding commands to process id(s)
[2025-06-04 12:28:45] 2025-06-04 16:28:33,488 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-06-04 12:28:45] 2025-06-04 16:28:33,491 | INFO     | did not find any defunct processes belonging to 43249
[2025-06-04 12:28:45] 2025-06-04 16:28:33,495 | INFO     | did not find any defunct processes belonging to 43249
[2025-06-04 12:28:45] 2025-06-04 16:28:33,495 | INFO     | ready for new job
[2025-06-04 12:28:45] 2025-06-04 16:28:33,495 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-06-04 12:28:45] 2025-06-04 16:28:33,497 | INFO     | **************************************
[2025-06-04 12:28:45] 2025-06-04 16:28:33,497 | INFO     | ***  PanDA Pilot version 3.10.2.2  ***
[2025-06-04 12:28:45] 2025-06-04 16:28:33,497 | INFO     | **************************************
[2025-06-04 12:28:45] 2025-06-04 16:28:33,497 | INFO     | 
[2025-06-04 12:28:45] 2025-06-04 16:28:33,499 | INFO     | architecture information:
[2025-06-04 12:28:45] 2025-06-04 16:28:33,499 | INFO     | executing command: cat /etc/os-release
[2025-06-04 12:28:45] 2025-06-04 16:28:33,511 | INFO     | cat /etc/os-release:
[2025-06-04 12:28:45] NAME="CentOS Linux"
[2025-06-04 12:28:45] VERSION="7 (Core)"
[2025-06-04 12:28:45] ID="centos"
[2025-06-04 12:28:45] ID_LIKE="rhel fedora"
[2025-06-04 12:28:45] VERSION_ID="7"
[2025-06-04 12:28:45] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-06-04 12:28:45] ANSI_COLOR="0;31"
[2025-06-04 12:28:45] CPE_NAME="cpe:/o:centos:centos:7"
[2025-06-04 12:28:45] HOME_URL="https://www.centos.org/"
[2025-06-04 12:28:45] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-06-04 12:28:45] 
[2025-06-04 12:28:45] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-06-04 12:28:45] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-06-04 12:28:45] REDHAT_SUPPORT_PRODUCT="centos"
[2025-06-04 12:28:45] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-06-04 12:28:45] 
[2025-06-04 12:28:45] 2025-06-04 16:28:33,512 | INFO     | **************************************
[2025-06-04 12:28:45] 2025-06-04 16:28:34,015 | INFO     | executing command: df -mP /tmp/boinchome/slots/2
[2025-06-04 12:28:45] 2025-06-04 16:28:34,033 | INFO     | sufficient remaining disk space (57634979840 B)
[2025-06-04 12:28:45] 2025-06-04 16:28:34,034 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-06-04 12:28:45] 2025-06-04 16:28:34,034 | INFO     | current server update state: UPDATING_FINAL
[2025-06-04 12:28:45] 2025-06-04 16:28:34,034 | INFO     | update_server=False
[2025-06-04 12:28:45] 2025-06-04 16:28:34,034 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-06-04 12:28:45] 2025-06-04 16:28:34,035 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-06-04 12:28:45] 2025-06-04 16:28:34,161 | INFO     | all data control threads have been joined
[2025-06-04 12:28:45] 2025-06-04 16:28:34,449 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-06-04 12:28:45] 2025-06-04 16:28:34,734 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-06-04 12:28:45] 2025-06-04 16:28:34,735 | INFO     | aborting loop
[2025-06-04 12:28:45] 2025-06-04 16:28:34,761 | INFO     | found 0 job(s) in 20 queues
[2025-06-04 12:28:45] 2025-06-04 16:28:34,761 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-06-04 12:28:45] 2025-06-04 16:28:34,761 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-06-04 12:28:45] 2025-06-04 16:28:34,874 | INFO     | all job control threads have been joined
[2025-06-04 12:28:45] 2025-06-04 16:28:34,964 | INFO     | all payload control threads have been joined
[2025-06-04 12:28:45] 2025-06-04 16:28:35,040 | INFO     | [job] retrieve thread has finished
[2025-06-04 12:28:45] 2025-06-04 16:28:35,040 | INFO     | [job] queue monitor thread has finished
[2025-06-04 12:28:45] 2025-06-04 16:28:35,051 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-06-04 12:28:45] 2025-06-04 16:28:35,166 | INFO     | [data] control thread has finished
[2025-06-04 12:28:45] 2025-06-04 16:28:35,523 | INFO     | [payload] validate_post thread has finished
[2025-06-04 12:28:45] 2025-06-04 16:28:35,625 | INFO     | [job] validate thread has finished
[2025-06-04 12:28:45] 2025-06-04 16:28:35,721 | INFO     | [payload] run_realtimelog thread has finished
[2025-06-04 12:28:45] 2025-06-04 16:28:35,726 | INFO     | [job] create_data_payload thread has finished
[2025-06-04 12:28:45] 2025-06-04 16:28:35,740 | INFO     | [job] job monitor thread has finished
[2025-06-04 12:28:45] 2025-06-04 16:28:35,851 | INFO     | [payload] failed_post thread has finished
[2025-06-04 12:28:45] 2025-06-04 16:28:35,879 | INFO     | [job] control thread has finished
[2025-06-04 12:28:45] 2025-06-04 16:28:35,964 | INFO     | [payload] control thread has finished
[2025-06-04 12:28:45] 2025-06-04 16:28:36,100 | INFO     | [payload] validate_pre thread has finished
[2025-06-04 12:28:45] 2025-06-04 16:28:36,310 | INFO     | [data] copytool_in thread has finished
[2025-06-04 12:28:45] 2025-06-04 16:28:36,455 | INFO     | [data] copytool_out thread has finished
[2025-06-04 12:28:45] 2025-06-04 16:28:36,511 | INFO     | [payload] execute_payloads thread has finished
[2025-06-04 12:28:45] 2025-06-04 16:28:39,057 | INFO     | [data] queue_monitor thread has finished
[2025-06-04 12:28:45] 2025-06-04 16:28:39,712 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 139962769278784)>', '<ExcThread(monitor, started 139962481620736)>']
[2025-06-04 12:28:45] 2025-06-04 16:28:39,786 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-06-04 12:28:45] 2025-06-04 16:28:39,786 | INFO     | [monitor] control thread has ended
[2025-06-04 12:28:45] 2025-06-04 16:28:44,730 | INFO     | all workflow threads have been joined
[2025-06-04 12:28:45] 2025-06-04 16:28:44,730 | INFO     | end of generic workflow (traces error code: 0)
[2025-06-04 12:28:45] 2025-06-04 16:28:44,730 | INFO     | traces error code: 0
[2025-06-04 12:28:45] 2025-06-04 16:28:44,731 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-06-04 12:28:45] 2025-06-04 16:28:44,860 [wrapper] ==== pilot stdout END ====
[2025-06-04 12:28:45] 2025-06-04 16:28:44,862 [wrapper] ==== wrapper stdout RESUME ====
[2025-06-04 12:28:45] 2025-06-04 16:28:44,865 [wrapper] pilotpid: 35039
[2025-06-04 12:28:45] 2025-06-04 16:28:44,868 [wrapper] Pilot exit status: 0
[2025-06-04 12:28:45] 2025-06-04 16:28:44,876 [wrapper] pandaids: 6679801630
[2025-06-04 12:28:45] 2025-06-04 16:28:44,911 [wrapper] cleanup supervisor_pilot 16119 35040
[2025-06-04 12:28:45] 2025-06-04 16:28:44,914 [wrapper] Test setup, not cleaning
[2025-06-04 12:28:45] 2025-06-04 16:28:44,916 [wrapper] apfmon messages muted
[2025-06-04 12:28:45] 2025-06-04 16:28:44,918 [wrapper] ==== wrapper stdout END ====
[2025-06-04 12:28:45] 2025-06-04 16:28:44,920 [wrapper] ==== wrapper stderr END ====
[2025-06-04 12:28:45]  *** Error codes and diagnostics ***
[2025-06-04 12:28:45]     "exeErrorCode": 0,
[2025-06-04 12:28:45]     "exeErrorDiag": "",
[2025-06-04 12:28:45]     "pilotErrorCode": 0,
[2025-06-04 12:28:45]     "pilotErrorDiag": "",
[2025-06-04 12:28:45]  *** Listing of results directory ***
[2025-06-04 12:28:45] total 379840
[2025-06-04 12:28:45] -rw-r--r-- 1 boincer umatlas    495897 Jun  4 10:23 pilot3.tar.gz
[2025-06-04 12:28:45] -rw-r--r-- 1 boincer umatlas      5111 Jun  4 10:51 queuedata.json
[2025-06-04 12:28:45] -rwx------ 1 boincer umatlas     37140 Jun  4 10:52 runpilot2-wrapper.sh
[2025-06-04 12:28:45] -rw-r--r-- 1 boincer umatlas       100 Jun  4 10:57 wrapper_26015_x86_64-pc-linux-gnu
[2025-06-04 12:28:45] -rwxr-xr-x 1 boincer umatlas      7986 Jun  4 10:57 run_atlas
[2025-06-04 12:28:45] -rw-r--r-- 1 boincer umatlas       105 Jun  4 10:57 job.xml
[2025-06-04 12:28:45] -rw-r--r-- 2 boincer umatlas 213688892 Jun  4 10:57 EVNT.45006593._000198.pool.root.1
[2025-06-04 12:28:45] -rw-r--r-- 2 boincer umatlas    508880 Jun  4 10:57 input.tar.gz
[2025-06-04 12:28:45] -rw-r--r-- 2 boincer umatlas     15093 Jun  4 10:57 start_atlas.sh
[2025-06-04 12:28:45] drwxrwx--x 2 boincer umatlas      4096 Jun  4 10:57 shared
[2025-06-04 12:28:45] -rw-r--r-- 1 boincer umatlas         0 Jun  4 10:57 boinc_lockfile
[2025-06-04 12:28:45] -rw-r--r-- 1 boincer umatlas      2521 Jun  4 10:57 pandaJob.out
[2025-06-04 12:28:45] -rw------- 1 boincer umatlas    987207 Jun  4 10:57 agis_schedconf.cvmfs.json
[2025-06-04 12:28:45] -rw------- 1 boincer umatlas   1598969 Jun  4 10:57 agis_ddmendpoints.agis.ALL.json
[2025-06-04 12:28:45] drwx------ 4 boincer umatlas      4096 Jun  4 10:57 pilot3
[2025-06-04 12:28:45] -rw-r--r-- 1 boincer umatlas      6131 Jun  4 12:22 init_data.xml
[2025-06-04 12:28:45] -rw------- 1 boincer umatlas        95 Jun  4 12:27 pilot_heartbeat.json
[2025-06-04 12:28:45] -rw------- 1 boincer umatlas 169706402 Jun  4 12:28 HITS.45006595._056739.pool.root.1
[2025-06-04 12:28:45] -rw-r--r-- 1 boincer umatlas       529 Jun  4 12:28 boinc_task_state.xml
[2025-06-04 12:28:45] -rw------- 1 boincer umatlas      1053 Jun  4 12:28 memory_monitor_summary.json
[2025-06-04 12:28:45] -rw------- 1 boincer umatlas    330146 Jun  4 12:28 log.45006595._056739.job.log.tgz.1
[2025-06-04 12:28:45] -rw------- 1 boincer umatlas      7744 Jun  4 12:28 heartbeat.json
[2025-06-04 12:28:45] -rw-r--r-- 1 boincer umatlas        27 Jun  4 12:28 wrapper_checkpoint.txt
[2025-06-04 12:28:45] -rw-r--r-- 1 boincer umatlas      8192 Jun  4 12:28 boinc_mmap_file
[2025-06-04 12:28:45] -rw------- 1 boincer umatlas      4353 Jun  4 12:28 pilotlog.txt
[2025-06-04 12:28:45] -rw------- 1 boincer umatlas    532977 Jun  4 12:28 log.45006595._056739.job.log.1
[2025-06-04 12:28:45] -rw------- 1 boincer umatlas       357 Jun  4 12:28 output.list
[2025-06-04 12:28:45] -rw-r--r-- 1 boincer umatlas       620 Jun  4 12:28 runtime_log
[2025-06-04 12:28:45] -rw------- 1 boincer umatlas    880640 Jun  4 12:28 result.tar.gz
[2025-06-04 12:28:45] -rw-r--r-- 1 boincer umatlas      8654 Jun  4 12:28 runtime_log.err
[2025-06-04 12:28:45] -rw------- 1 boincer umatlas       657 Jun  4 12:28 aG5NDmfe4g7nsSi4ap6QjLDmwznN0nGgGQJmUXzaDmL0nKDmIOmtdm.diag
[2025-06-04 12:28:45] -rw-r--r-- 1 boincer umatlas     21176 Jun  4 12:28 stderr.txt
[2025-06-04 12:28:45] HITS file was successfully produced:
[2025-06-04 12:28:45] -rw------- 1 boincer umatlas 169706402 Jun  4 12:28 shared/HITS.pool.root.1
[2025-06-04 12:28:45]  *** Contents of shared directory: ***
[2025-06-04 12:28:45] total 375796
[2025-06-04 12:28:45] -rw-r--r-- 2 boincer umatlas 213688892 Jun  4 10:57 ATLAS.root_0
[2025-06-04 12:28:45] -rw-r--r-- 2 boincer umatlas    508880 Jun  4 10:57 input.tar.gz
[2025-06-04 12:28:45] -rw-r--r-- 2 boincer umatlas     15093 Jun  4 10:57 start_atlas.sh
[2025-06-04 12:28:45] -rw------- 1 boincer umatlas 169706402 Jun  4 12:28 HITS.pool.root.1
[2025-06-04 12:28:45] -rw------- 1 boincer umatlas    880640 Jun  4 12:28 result.tar.gz
12:28:46 (30540): run_atlas exited; CPU time 38790.099748
12:28:46 (30540): called boinc_finish(0)

</stderr_txt>
]]>

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