Stderr output

<core_client_version>8.1.0</core_client_version>
<![CDATA[
<stderr_txt>
11:02:13 (3550925): wrapper (7.7.26015): starting
11:02:13 (3550925): wrapper: running run_atlas (--nthreads 8)
[2025-06-04 11:02:14] Arguments: --nthreads 8
[2025-06-04 11:02:14] Threads: 8
[2025-06-04 11:02:14] Checking for CVMFS
[2025-06-04 11:02:14] Probing /cvmfs/atlas.cern.ch... OK
[2025-06-04 11:02:14] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-06-04 11:02:14] Running cvmfs_config stat atlas.cern.ch
[2025-06-04 11:02:14] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-06-04 11:02:14] 2.12.6.0 1685548 23449 444488 146783 1 448 26732383 32947200 10173 16776704 0 123839514 99.689 96861739 27302 http://cvmfs-s1fnal.opensciencegrid.org:8000/cvmfs/atlas.cern.ch http://192.41.231.237:6081 1
[2025-06-04 11:02:14] CVMFS is ok
[2025-06-04 11:02:14] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-06-04 11:02:14] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2025-06-04 11:02:14] Further information can be found at the LHC@home message board.
[2025-06-04 11:02:14] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-06-04 11:02:14] Checking for apptainer binary...
[2025-06-04 11:02:14] Using apptainer found in PATH at /usr/bin/apptainer
[2025-06-04 11:02:14] Running /usr/bin/apptainer --version
[2025-06-04 11:02:14] apptainer version 1.4.1-1.el9
[2025-06-04 11:02:14] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-06-04 11:02:14] c6-6-8-2.aglt2.org
[2025-06-04 11:02:14] apptainer works
[2025-06-04 11:02:14] Set ATHENA_PROC_NUMBER=8
[2025-06-04 11:02:14] Set ATHENA_CORE_NUMBER=8
[2025-06-04 11:02:14] Starting ATLAS job with PandaID=6679801712
[2025-06-04 11:02:14] Running command: /usr/bin/apptainer exec -B /cvmfs,/tmp/boinchome/slots/1 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-06-04 11:54:29]  *** The last 200 lines of the pilot log: ***
[2025-06-04 11:54:29]  filetype=log
[2025-06-04 11:54:29]  guid=f1b8b50d-21aa-4177-804b-16aac099600b
[2025-06-04 11:54:29]  inputddms=['NDGF-T1_DATADISK', 'CERN-PROD_DATADISK']
[2025-06-04 11:54:29]  is_altstaged=None
[2025-06-04 11:54:29]  is_tar=False
[2025-06-04 11:54:29]  lfn=log.45006595._056740.job.log.tgz.1
[2025-06-04 11:54:29]  mtime=0
[2025-06-04 11:54:29]  protocol_id=None
[2025-06-04 11:54:29]  protocols=[{'endpoint': 'davs://dav.ndgf.org:443', 'flavour': 'WEBDAV', 'id': 331, 'path': '/atlas/disk/atlasdatadisk/rucio/'}]
[2025-06-04 11:54:29]  replicas=None
[2025-06-04 11:54:29]  scope=mc23_13p6TeV
[2025-06-04 11:54:29]  status=None
[2025-06-04 11:54:29]  status_code=0
[2025-06-04 11:54:29]  storage_token=
[2025-06-04 11:54:29]  surl=/tmp/boinchome/slots/1/PanDA_Pilot-6679801712/log.45006595._056740.job.log.tgz.1
[2025-06-04 11:54:29]  turl=davs://dav.ndgf.org:443/atlas/disk/atlasdatadisk/rucio/mc23_13p6TeV/3b/ad/log.45006595._056740.job.log.tgz.1
[2025-06-04 11:54:29]  workdir=None
[2025-06-04 11:54:29] ]
[2025-06-04 11:54:29] 2025-06-04 15:54:10,550 | INFO     | transferring file log.45006595._056740.job.log.tgz.1 from /tmp/boinchome/slots/1/PanDA_Pilot-6679801712/log.45006595._056740.job.log.tgz.1 to /tmp/boinchome/slots/
[2025-06-04 11:54:29] 2025-06-04 15:54:10,550 | INFO     | executing command: /usr/bin/env mv /tmp/boinchome/slots/1/PanDA_Pilot-6679801712/log.45006595._056740.job.log.tgz.1 /tmp/boinchome/slots/1/log.45006595._056740.job
[2025-06-04 11:54:29] 2025-06-04 15:54:10,565 | INFO     | adding to output.list: log.45006595._056740.job.log.tgz.1 davs://dav.ndgf.org:443/atlas/disk/atlasdatadisk/rucio/mc23_13p6TeV/3b/ad/log.45006595._056740.job.log.tg
[2025-06-04 11:54:29] 2025-06-04 15:54:10,566 | INFO     | alt stage-out settings: ['pl', 'write_lan', 'w', 'default'], allow_altstageout=False, remain_files=0, has_altstorage=True
[2025-06-04 11:54:29] 2025-06-04 15:54:10,566 | INFO     | summary of transferred files:
[2025-06-04 11:54:29] 2025-06-04 15:54:10,566 | INFO     |  -- lfn=log.45006595._056740.job.log.tgz.1, status_code=0, status=transferred
[2025-06-04 11:54:29] 2025-06-04 15:54:10,567 | INFO     | stage-out finished correctly
[2025-06-04 11:54:29] 2025-06-04 15:54:12,044 | INFO     | finished stage-out for finished payload, adding job to finished_jobs queue
[2025-06-04 11:54:29] 2025-06-04 15:54:13,631 | INFO     | job 6679801712 has state=finished
[2025-06-04 11:54:29] 2025-06-04 15:54:13,632 | INFO     | preparing for final server update for job 6679801712 in state='finished'
[2025-06-04 11:54:29] 2025-06-04 15:54:13,695 | INFO     | sent prmon JSON dictionary to logstash server (urllib method)
[2025-06-04 11:54:29] 2025-06-04 15:54:13,695 | INFO     | this job has now completed (state=finished)
[2025-06-04 11:54:29] 2025-06-04 15:54:13,695 | INFO     | pilot will not update the server (heartbeat message will be written to file)
[2025-06-04 11:54:29] 2025-06-04 15:54:13,695 | INFO     | log transfer has been attempted: DONE
[2025-06-04 11:54:29] 2025-06-04 15:54:13,695 | INFO     | job 6679801712 has finished - writing final server update
[2025-06-04 11:54:29] 2025-06-04 15:54:13,695 | INFO     | total number of processed events: 400 (read)
[2025-06-04 11:54:29] 2025-06-04 15:54:13,710 | INFO     | executing command: lscpu
[2025-06-04 11:54:29] 2025-06-04 15:54:13,762 | INFO     | executing command: export ATLAS_LOCAL_ROOT_BASE=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase;source ${ATLAS_LOCAL_ROOT_BASE}/user/atlasLocalSetup.sh --quiet;lsetup
[2025-06-04 11:54:29] 2025-06-04 15:54:15,002 | WARNING  | process 3561949 can no longer be monitored (due to stat problems) - aborting
[2025-06-04 11:54:29] 2025-06-04 15:54:15,002 | INFO     | using path: /tmp/boinchome/slots/1/PanDA_Pilot-6679801712/memory_monitor_summary.json (trf name=prmon)
[2025-06-04 11:54:29] 2025-06-04 15:54:15,178 | INFO     | number of running child processes to parent process 3561949: 1
[2025-06-04 11:54:29] 2025-06-04 15:54:15,178 | INFO     | maximum number of monitored processes: 6
[2025-06-04 11:54:29] 2025-06-04 15:54:15,984 | INFO     | CPU arch script returned: x86-64-v4
[2025-06-04 11:54:29] 2025-06-04 15:54:15,984 | INFO     | using path: /tmp/boinchome/slots/1/PanDA_Pilot-6679801712/memory_monitor_summary.json (trf name=prmon)
[2025-06-04 11:54:29] 2025-06-04 15:54:15,985 | INFO     | extracted standard info from prmon json
[2025-06-04 11:54:29] 2025-06-04 15:54:15,985 | INFO     | extracted standard memory fields from prmon json
[2025-06-04 11:54:29] 2025-06-04 15:54:15,985 | WARNING  | GPU info not found in prmon json: 'gpu'
[2025-06-04 11:54:29] 2025-06-04 15:54:15,985 | WARNING  | format EVNTtoHITS has no such key: dbData
[2025-06-04 11:54:29] 2025-06-04 15:54:15,985 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2025-06-04 11:54:29] 2025-06-04 15:54:15,987 | INFO     | fitting pss+swap vs Time
[2025-06-04 11:54:29] 2025-06-04 15:54:15,987 | INFO     | sum of square deviations: 26400495.0
[2025-06-04 11:54:29] 2025-06-04 15:54:15,987 | INFO     | sum of deviations: -1342278464.9999998
[2025-06-04 11:54:29] 2025-06-04 15:54:15,987 | INFO     | mean x: 1749050983.5
[2025-06-04 11:54:29] 2025-06-04 15:54:15,987 | INFO     | mean y: 2255779.9545454546
[2025-06-04 11:54:29] 2025-06-04 15:54:15,987 | INFO     | -- intersect: 88929128906.35312
[2025-06-04 11:54:29] 2025-06-04 15:54:15,987 | INFO     | intersect: 88929128906.35312
[2025-06-04 11:54:29] 2025-06-04 15:54:15,988 | INFO     | chi2: 0.028484125410050763
[2025-06-04 11:54:29] 2025-06-04 15:54:15,988 | INFO     | -- intersect: 88929128906.35312
[2025-06-04 11:54:29] 2025-06-04 15:54:15,988 | INFO     | current memory leak: -50.84 B/s (using 44 data points, chi2=0.03)
[2025-06-04 11:54:29] 2025-06-04 15:54:15,988 | INFO     | ..............................
[2025-06-04 11:54:29] 2025-06-04 15:54:15,988 | INFO     | . Timing measurements:
[2025-06-04 11:54:29] 2025-06-04 15:54:15,988 | INFO     | . get job = 0 s
[2025-06-04 11:54:29] 2025-06-04 15:54:15,988 | INFO     | . initial setup = 2 s
[2025-06-04 11:54:29] 2025-06-04 15:54:15,988 | INFO     | . payload setup = 5 s
[2025-06-04 11:54:29] 2025-06-04 15:54:15,988 | INFO     | . stage-in = 0 s
[2025-06-04 11:54:29] 2025-06-04 15:54:15,989 | INFO     | . payload execution = 3082 s
[2025-06-04 11:54:29] 2025-06-04 15:54:15,989 | INFO     | . stage-out = 0 s
[2025-06-04 11:54:29] 2025-06-04 15:54:15,989 | INFO     | . log creation = 0 s
[2025-06-04 11:54:29] 2025-06-04 15:54:15,989 | INFO     | ..............................
[2025-06-04 11:54:29] 2025-06-04 15:54:16,418 | INFO     | 
[2025-06-04 11:54:29] 2025-06-04 15:54:16,418 | INFO     | job summary report
[2025-06-04 11:54:29] 2025-06-04 15:54:16,418 | INFO     | --------------------------------------------------
[2025-06-04 11:54:29] 2025-06-04 15:54:16,418 | INFO     | PanDA job id: 6679801712
[2025-06-04 11:54:29] 2025-06-04 15:54:16,418 | INFO     | task id: 45006595
[2025-06-04 11:54:29] 2025-06-04 15:54:16,418 | INFO     | errors: (none)
[2025-06-04 11:54:29] 2025-06-04 15:54:16,418 | INFO     | status: LOG_TRANSFER = DONE 
[2025-06-04 11:54:29] 2025-06-04 15:54:16,418 | INFO     | pilot state: finished 
[2025-06-04 11:54:29] 2025-06-04 15:54:16,418 | INFO     | transexitcode: 0
[2025-06-04 11:54:29] 2025-06-04 15:54:16,418 | INFO     | exeerrorcode: 0
[2025-06-04 11:54:29] 2025-06-04 15:54:16,418 | INFO     | exeerrordiag: 
[2025-06-04 11:54:29] 2025-06-04 15:54:16,418 | INFO     | exitcode: 0
[2025-06-04 11:54:29] 2025-06-04 15:54:16,418 | INFO     | exitmsg: OK
[2025-06-04 11:54:29] 2025-06-04 15:54:16,419 | INFO     | cpuconsumptiontime: 22210 s
[2025-06-04 11:54:29] 2025-06-04 15:54:16,419 | INFO     | nevents: 400
[2025-06-04 11:54:29] 2025-06-04 15:54:16,419 | INFO     | neventsw: 0
[2025-06-04 11:54:29] 2025-06-04 15:54:16,419 | INFO     | pid: 3561949
[2025-06-04 11:54:29] 2025-06-04 15:54:16,419 | INFO     | pgrp: 3561949
[2025-06-04 11:54:29] 2025-06-04 15:54:16,419 | INFO     | corecount: 8
[2025-06-04 11:54:29] 2025-06-04 15:54:16,419 | INFO     | event service: False
[2025-06-04 11:54:29] 2025-06-04 15:54:16,419 | INFO     | sizes: {0: 2397120, 1: 2397319, 4: 2397525, 12: 2397553, 3091: 2422940, 3093: 2431881, 3094: 2432065, 3098: 2432235}
[2025-06-04 11:54:29] 2025-06-04 15:54:16,419 | INFO     | --------------------------------------------------
[2025-06-04 11:54:29] 2025-06-04 15:54:16,419 | INFO     | 
[2025-06-04 11:54:29] 2025-06-04 15:54:16,419 | INFO     | executing command: ls -lF /tmp/boinchome/slots/1
[2025-06-04 11:54:29] 2025-06-04 15:54:16,432 | INFO     | queue jobs had 0 job(s) [purged]
[2025-06-04 11:54:29] 2025-06-04 15:54:16,432 | INFO     | queue payloads had 0 job(s) [purged]
[2025-06-04 11:54:29] 2025-06-04 15:54:16,432 | INFO     | queue data_in had 0 job(s) [purged]
[2025-06-04 11:54:29] 2025-06-04 15:54:16,432 | INFO     | queue data_out had 0 job(s) [purged]
[2025-06-04 11:54:29] 2025-06-04 15:54:16,432 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-06-04 11:54:29] 2025-06-04 15:54:16,432 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-06-04 11:54:29] 2025-06-04 15:54:16,432 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-06-04 11:54:29] 2025-06-04 15:54:16,432 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-06-04 11:54:29] 2025-06-04 15:54:16,432 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-06-04 11:54:29] 2025-06-04 15:54:16,432 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-06-04 11:54:29] 2025-06-04 15:54:16,432 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-06-04 11:54:29] 2025-06-04 15:54:16,432 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-06-04 11:54:29] 2025-06-04 15:54:16,432 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-06-04 11:54:29] 2025-06-04 15:54:16,432 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-06-04 11:54:29] 2025-06-04 15:54:16,432 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-06-04 11:54:29] 2025-06-04 15:54:16,432 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-06-04 11:54:29] 2025-06-04 15:54:16,432 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-06-04 11:54:29] 2025-06-04 15:54:16,432 | INFO     | queue completed_jobids has 1 job(s)
[2025-06-04 11:54:29] 2025-06-04 15:54:16,433 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-06-04 11:54:29] 2025-06-04 15:54:16,433 | INFO     | queue messages had 0 job(s) [purged]
[2025-06-04 11:54:29] 2025-06-04 15:54:16,433 | INFO     | job 6679801712 has completed (purged errors)
[2025-06-04 11:54:29] 2025-06-04 15:54:16,433 | INFO     | overall cleanup function is called
[2025-06-04 11:54:29] 2025-06-04 15:54:17,439 | INFO     | --- collectZombieJob: --- 10, [3561949]
[2025-06-04 11:54:29] 2025-06-04 15:54:17,440 | INFO     | zombie collector waiting for pid 3561949
[2025-06-04 11:54:29] 2025-06-04 15:54:17,440 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-06-04 11:54:29] 2025-06-04 15:54:17,440 | INFO     | collected zombie processes
[2025-06-04 11:54:29] 2025-06-04 15:54:17,440 | INFO     | will attempt to kill all subprocesses of pid=3561949
[2025-06-04 11:54:29] 2025-06-04 15:54:17,675 | INFO     | process IDs to be killed: [3561949] (in reverse order)
[2025-06-04 11:54:29] 2025-06-04 15:54:17,728 | WARNING  | found no corresponding commands to process id(s)
[2025-06-04 11:54:29] 2025-06-04 15:54:17,728 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-06-04 11:54:29] 2025-06-04 15:54:17,735 | INFO     | did not find any defunct processes belonging to 3561949
[2025-06-04 11:54:29] 2025-06-04 15:54:17,741 | INFO     | did not find any defunct processes belonging to 3561949
[2025-06-04 11:54:29] 2025-06-04 15:54:17,742 | INFO     | ready for new job
[2025-06-04 11:54:29] 2025-06-04 15:54:17,742 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-06-04 11:54:29] 2025-06-04 15:54:17,743 | INFO     | **************************************
[2025-06-04 11:54:29] 2025-06-04 15:54:17,743 | INFO     | ***  PanDA Pilot version 3.10.2.2  ***
[2025-06-04 11:54:29] 2025-06-04 15:54:17,743 | INFO     | **************************************
[2025-06-04 11:54:29] 2025-06-04 15:54:17,743 | INFO     | 
[2025-06-04 11:54:29] 2025-06-04 15:54:17,759 | INFO     | architecture information:
[2025-06-04 11:54:29] 2025-06-04 15:54:17,759 | INFO     | executing command: cat /etc/os-release
[2025-06-04 11:54:29] 2025-06-04 15:54:17,769 | INFO     | cat /etc/os-release:
[2025-06-04 11:54:29] NAME="CentOS Linux"
[2025-06-04 11:54:29] VERSION="7 (Core)"
[2025-06-04 11:54:29] ID="centos"
[2025-06-04 11:54:29] ID_LIKE="rhel fedora"
[2025-06-04 11:54:29] VERSION_ID="7"
[2025-06-04 11:54:29] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-06-04 11:54:29] ANSI_COLOR="0;31"
[2025-06-04 11:54:29] CPE_NAME="cpe:/o:centos:centos:7"
[2025-06-04 11:54:29] HOME_URL="https://www.centos.org/"
[2025-06-04 11:54:29] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-06-04 11:54:29] 
[2025-06-04 11:54:29] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-06-04 11:54:29] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-06-04 11:54:29] REDHAT_SUPPORT_PRODUCT="centos"
[2025-06-04 11:54:29] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-06-04 11:54:29] 
[2025-06-04 11:54:29] 2025-06-04 15:54:17,769 | INFO     | **************************************
[2025-06-04 11:54:29] 2025-06-04 15:54:18,272 | INFO     | executing command: df -mP /tmp/boinchome/slots/1
[2025-06-04 11:54:29] 2025-06-04 15:54:18,285 | INFO     | sufficient remaining disk space (75677827072 B)
[2025-06-04 11:54:29] 2025-06-04 15:54:18,285 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-06-04 11:54:29] 2025-06-04 15:54:18,286 | INFO     | current server update state: UPDATING_FINAL
[2025-06-04 11:54:29] 2025-06-04 15:54:18,286 | INFO     | update_server=False
[2025-06-04 11:54:29] 2025-06-04 15:54:18,286 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-06-04 11:54:29] 2025-06-04 15:54:18,286 | WARNING  | aborting monitor loop since graceful_stop has been set (timing out remaining threads)
[2025-06-04 11:54:29] 2025-06-04 15:54:18,287 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-06-04 11:54:29] 2025-06-04 15:54:18,287 | INFO     | found 0 job(s) in 20 queues
[2025-06-04 11:54:29] 2025-06-04 15:54:18,287 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-06-04 11:54:29] 2025-06-04 15:54:18,287 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-06-04 11:54:29] 2025-06-04 15:54:18,677 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-06-04 11:54:29] 2025-06-04 15:54:18,687 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-06-04 11:54:29] 2025-06-04 15:54:18,687 | INFO     | aborting loop
[2025-06-04 11:54:29] 2025-06-04 15:54:19,081 | INFO     | all data control threads have been joined
[2025-06-04 11:54:29] 2025-06-04 15:54:19,223 | INFO     | all job control threads have been joined
[2025-06-04 11:54:29] 2025-06-04 15:54:19,291 | INFO     | all payload control threads have been joined
[2025-06-04 11:54:29] 2025-06-04 15:54:19,292 | INFO     | [job] retrieve thread has finished
[2025-06-04 11:54:29] 2025-06-04 15:54:19,567 | INFO     | [payload] validate_pre thread has finished
[2025-06-04 11:54:29] 2025-06-04 15:54:19,582 | INFO     | [payload] validate_post thread has finished
[2025-06-04 11:54:29] 2025-06-04 15:54:19,692 | INFO     | [job] job monitor thread has finished
[2025-06-04 11:54:29] 2025-06-04 15:54:19,774 | INFO     | [payload] failed_post thread has finished
[2025-06-04 11:54:29] 2025-06-04 15:54:20,076 | INFO     | [data] copytool_in thread has finished
[2025-06-04 11:54:29] 2025-06-04 15:54:20,086 | INFO     | [data] control thread has finished
[2025-06-04 11:54:29] 2025-06-04 15:54:20,224 | INFO     | [job] control thread has finished
[2025-06-04 11:54:29] 2025-06-04 15:54:20,296 | INFO     | [payload] control thread has finished
[2025-06-04 11:54:29] 2025-06-04 15:54:20,399 | INFO     | [payload] execute_payloads thread has finished
[2025-06-04 11:54:29] 2025-06-04 15:54:20,588 | INFO     | [job] validate thread has finished
[2025-06-04 11:54:29] 2025-06-04 15:54:20,683 | INFO     | [data] copytool_out thread has finished
[2025-06-04 11:54:29] 2025-06-04 15:54:20,694 | INFO     | [payload] run_realtimelog thread has finished
[2025-06-04 11:54:29] 2025-06-04 15:54:20,769 | INFO     | [job] create_data_payload thread has finished
[2025-06-04 11:54:29] 2025-06-04 15:54:21,085 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-06-04 11:54:29] 2025-06-04 15:54:22,090 | INFO     | [job] queue monitor thread has finished
[2025-06-04 11:54:29] 2025-06-04 15:54:22,293 | INFO     | [data] queue_monitor thread has finished
[2025-06-04 11:54:29] 2025-06-04 15:54:24,143 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140584766433088)>', '<ExcThread(monitor, started 140583993595648)>']
[2025-06-04 11:54:29] 2025-06-04 15:54:24,312 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-06-04 11:54:29] 2025-06-04 15:54:24,313 | INFO     | [monitor] control thread has ended
[2025-06-04 11:54:29] 2025-06-04 15:54:29,165 | INFO     | all workflow threads have been joined
[2025-06-04 11:54:29] 2025-06-04 15:54:29,166 | INFO     | end of generic workflow (traces error code: 0)
[2025-06-04 11:54:29] 2025-06-04 15:54:29,166 | INFO     | traces error code: 0
[2025-06-04 11:54:29] 2025-06-04 15:54:29,166 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-06-04 11:54:29] 2025-06-04 15:54:29,307 [wrapper] ==== pilot stdout END ====
[2025-06-04 11:54:29] 2025-06-04 15:54:29,309 [wrapper] ==== wrapper stdout RESUME ====
[2025-06-04 11:54:29] 2025-06-04 15:54:29,311 [wrapper] pilotpid: 3554958
[2025-06-04 11:54:29] 2025-06-04 15:54:29,312 [wrapper] Pilot exit status: 0
[2025-06-04 11:54:29] 2025-06-04 15:54:29,318 [wrapper] pandaids: 6679801712
[2025-06-04 11:54:29] 2025-06-04 15:54:29,356 [wrapper] cleanup supervisor_pilot 3721629 3554959
[2025-06-04 11:54:29] 2025-06-04 15:54:29,357 [wrapper] Test setup, not cleaning
[2025-06-04 11:54:29] 2025-06-04 15:54:29,359 [wrapper] apfmon messages muted
[2025-06-04 11:54:29] 2025-06-04 15:54:29,360 [wrapper] ==== wrapper stdout END ====
[2025-06-04 11:54:29] 2025-06-04 15:54:29,361 [wrapper] ==== wrapper stderr END ====
[2025-06-04 11:54:29]  *** Error codes and diagnostics ***
[2025-06-04 11:54:29]     "exeErrorCode": 0,
[2025-06-04 11:54:29]     "exeErrorDiag": "",
[2025-06-04 11:54:29]     "pilotErrorCode": 0,
[2025-06-04 11:54:29]     "pilotErrorDiag": "",
[2025-06-04 11:54:29]  *** Listing of results directory ***
[2025-06-04 11:54:29] total 390180
[2025-06-04 11:54:29] -rw-r--r-- 1 boincer umatlas    495897 Jun  4 10:23 pilot3.tar.gz
[2025-06-04 11:54:29] -rw-r--r-- 1 boincer umatlas      5111 Jun  4 10:51 queuedata.json
[2025-06-04 11:54:29] -rwx------ 1 boincer umatlas     37140 Jun  4 10:52 runpilot2-wrapper.sh
[2025-06-04 11:54:29] -rw-r--r-- 1 boincer umatlas       100 Jun  4 11:02 wrapper_26015_x86_64-pc-linux-gnu
[2025-06-04 11:54:29] -rwxr-xr-x 1 boincer umatlas      7986 Jun  4 11:02 run_atlas
[2025-06-04 11:54:29] -rw-r--r-- 1 boincer umatlas       105 Jun  4 11:02 job.xml
[2025-06-04 11:54:29] -rw-r--r-- 2 boincer umatlas 217436856 Jun  4 11:02 EVNT.45006593._002180.pool.root.1
[2025-06-04 11:54:29] drwxrwx--x 2 boincer umatlas      4096 Jun  4 11:02 shared
[2025-06-04 11:54:29] -rw-r--r-- 2 boincer umatlas    508883 Jun  4 11:02 input.tar.gz
[2025-06-04 11:54:29] -rw-r--r-- 2 boincer umatlas     15093 Jun  4 11:02 start_atlas.sh
[2025-06-04 11:54:29] -rw-r--r-- 1 boincer umatlas         0 Jun  4 11:02 boinc_lockfile
[2025-06-04 11:54:29] -rw-r--r-- 1 boincer umatlas      2524 Jun  4 11:02 pandaJob.out
[2025-06-04 11:54:29] -rw------- 1 boincer umatlas    987207 Jun  4 11:02 agis_schedconf.cvmfs.json
[2025-06-04 11:54:29] -rw------- 1 boincer umatlas   1598969 Jun  4 11:02 agis_ddmendpoints.agis.ALL.json
[2025-06-04 11:54:29] drwx------ 4 boincer umatlas      4096 Jun  4 11:02 pilot3
[2025-06-04 11:54:29] -rw-r--r-- 1 boincer umatlas      6856 Jun  4 11:46 init_data.xml
[2025-06-04 11:54:29] -rw------- 1 boincer umatlas        95 Jun  4 11:53 pilot_heartbeat.json
[2025-06-04 11:54:29] -rw------- 1 boincer umatlas 177034864 Jun  4 11:53 HITS.45006595._056740.pool.root.1
[2025-06-04 11:54:29] -rw-r--r-- 1 boincer umatlas       529 Jun  4 11:53 boinc_task_state.xml
[2025-06-04 11:54:29] -rw------- 1 boincer umatlas      1036 Jun  4 11:54 memory_monitor_summary.json
[2025-06-04 11:54:29] -rw------- 1 boincer umatlas    295426 Jun  4 11:54 log.45006595._056740.job.log.tgz.1
[2025-06-04 11:54:29] -rw------- 1 boincer umatlas      7711 Jun  4 11:54 heartbeat.json
[2025-06-04 11:54:29] -rw-r--r-- 1 boincer umatlas      8192 Jun  4 11:54 boinc_mmap_file
[2025-06-04 11:54:29] -rw-r--r-- 1 boincer umatlas        27 Jun  4 11:54 wrapper_checkpoint.txt
[2025-06-04 11:54:29] -rw------- 1 boincer umatlas      4476 Jun  4 11:54 pilotlog.txt
[2025-06-04 11:54:29] -rw------- 1 boincer umatlas    323410 Jun  4 11:54 log.45006595._056740.job.log.1
[2025-06-04 11:54:29] -rw------- 1 boincer umatlas       357 Jun  4 11:54 output.list
[2025-06-04 11:54:29] -rw-r--r-- 1 boincer umatlas       620 Jun  4 11:54 runtime_log
[2025-06-04 11:54:29] -rw------- 1 boincer umatlas    634880 Jun  4 11:54 result.tar.gz
[2025-06-04 11:54:29] -rw-r--r-- 1 boincer umatlas      8659 Jun  4 11:54 runtime_log.err
[2025-06-04 11:54:29] -rw------- 1 boincer umatlas       650 Jun  4 11:54 Hn6NDmfe4g7nsSi4ap6QjLDmwznN0nGgGQJmUXzaDmM0nKDmIGYWRo.diag
[2025-06-04 11:54:29] -rw-r--r-- 1 boincer umatlas     21257 Jun  4 11:54 stderr.txt
[2025-06-04 11:54:29] HITS file was successfully produced:
[2025-06-04 11:54:29] -rw------- 1 boincer umatlas 177034864 Jun  4 11:53 shared/HITS.pool.root.1
[2025-06-04 11:54:29]  *** Contents of shared directory: ***
[2025-06-04 11:54:29] total 386376
[2025-06-04 11:54:29] -rw-r--r-- 2 boincer umatlas 217436856 Jun  4 11:02 ATLAS.root_0
[2025-06-04 11:54:29] -rw-r--r-- 2 boincer umatlas    508883 Jun  4 11:02 input.tar.gz
[2025-06-04 11:54:29] -rw-r--r-- 2 boincer umatlas     15093 Jun  4 11:02 start_atlas.sh
[2025-06-04 11:54:29] -rw------- 1 boincer umatlas 177034864 Jun  4 11:53 HITS.pool.root.1
[2025-06-04 11:54:29] -rw------- 1 boincer umatlas    634880 Jun  4 11:54 result.tar.gz
11:54:30 (3550925): run_atlas exited; CPU time 22318.849771
11:54:30 (3550925): called boinc_finish(0)

</stderr_txt>
]]>

©2025 CERN