Stderr output

<core_client_version>8.1.0</core_client_version>
<![CDATA[
<stderr_txt>
10:47:45 (2819816): wrapper (7.7.26015): starting
10:47:45 (2819816): wrapper: running run_atlas (--nthreads 8)
[2025-06-04 10:47:45] Arguments: --nthreads 8
[2025-06-04 10:47:45] Threads: 8
[2025-06-04 10:47:45] Checking for CVMFS
[2025-06-04 10:47:45] Probing /cvmfs/atlas.cern.ch... OK
[2025-06-04 10:47:45] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-06-04 10:47:45] Running cvmfs_config stat atlas.cern.ch
[2025-06-04 10:47:45] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-06-04 10:47:45] 2.12.6.0 229055 786 76092 146783 1 17 2560077 40960001 5496 16776704 0 4597460 99.855 875465 60227 http://cvmfs-s1fnal.opensciencegrid.org:8000/cvmfs/atlas.cern.ch http://192.41.231.237:6081 1
[2025-06-04 10:47:45] CVMFS is ok
[2025-06-04 10:47:45] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-06-04 10:47:45] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2025-06-04 10:47:45] Further information can be found at the LHC@home message board.
[2025-06-04 10:47:45] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-06-04 10:47:45] Checking for apptainer binary...
[2025-06-04 10:47:45] Using apptainer found in PATH at /usr/bin/apptainer
[2025-06-04 10:47:45] Running /usr/bin/apptainer --version
[2025-06-04 10:47:45] apptainer version 1.4.1-1.el9
[2025-06-04 10:47:45] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-06-04 10:47:45] c6-5-7-4.aglt2.org
[2025-06-04 10:47:45] apptainer works
[2025-06-04 10:47:45] Set ATHENA_PROC_NUMBER=8
[2025-06-04 10:47:45] Set ATHENA_CORE_NUMBER=8
[2025-06-04 10:47:45] Starting ATLAS job with PandaID=6679604663
[2025-06-04 10:47:45] Running command: /usr/bin/apptainer exec -B /cvmfs,/tmp/boinchome/slots/4 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-06-04 12:10:34]  *** The last 200 lines of the pilot log: ***
[2025-06-04 12:10:34]  inputddms=['NDGF-T1_DATADISK', 'CERN-PROD_DATADISK']
[2025-06-04 12:10:34]  is_altstaged=None
[2025-06-04 12:10:34]  is_tar=False
[2025-06-04 12:10:34]  lfn=log.44871837._102202.job.log.tgz.1
[2025-06-04 12:10:34]  mtime=0
[2025-06-04 12:10:34]  protocol_id=None
[2025-06-04 12:10:34]  protocols=[{'endpoint': 'davs://dav.ndgf.org:443', 'flavour': 'WEBDAV', 'id': 331, 'path': '/atlas/disk/atlasdatadisk/rucio/'}]
[2025-06-04 12:10:34]  replicas=None
[2025-06-04 12:10:34]  scope=mc23_13p6TeV
[2025-06-04 12:10:34]  status=None
[2025-06-04 12:10:34]  status_code=0
[2025-06-04 12:10:34]  storage_token=
[2025-06-04 12:10:34]  surl=/tmp/boinchome/slots/4/PanDA_Pilot-6679604663/log.44871837._102202.job.log.tgz.1
[2025-06-04 12:10:34]  turl=davs://dav.ndgf.org:443/atlas/disk/atlasdatadisk/rucio/mc23_13p6TeV/58/6d/log.44871837._102202.job.log.tgz.1
[2025-06-04 12:10:34]  workdir=None
[2025-06-04 12:10:34] ]
[2025-06-04 12:10:34] 2025-06-04 16:10:09,492 | INFO     | transferring file log.44871837._102202.job.log.tgz.1 from /tmp/boinchome/slots/4/PanDA_Pilot-6679604663/log.44871837._102202.job.log.tgz.1 to /tmp/boinchome/slots/
[2025-06-04 12:10:34] 2025-06-04 16:10:09,492 | INFO     | executing command: /usr/bin/env mv /tmp/boinchome/slots/4/PanDA_Pilot-6679604663/log.44871837._102202.job.log.tgz.1 /tmp/boinchome/slots/4/log.44871837._102202.job
[2025-06-04 12:10:34] 2025-06-04 16:10:09,504 | INFO     | adding to output.list: log.44871837._102202.job.log.tgz.1 davs://dav.ndgf.org:443/atlas/disk/atlasdatadisk/rucio/mc23_13p6TeV/58/6d/log.44871837._102202.job.log.tg
[2025-06-04 12:10:34] 2025-06-04 16:10:09,504 | INFO     | alt stage-out settings: ['pl', 'write_lan', 'w', 'default'], allow_altstageout=False, remain_files=0, has_altstorage=True
[2025-06-04 12:10:34] 2025-06-04 16:10:09,504 | INFO     | summary of transferred files:
[2025-06-04 12:10:34] 2025-06-04 16:10:09,504 | INFO     |  -- lfn=log.44871837._102202.job.log.tgz.1, status_code=0, status=transferred
[2025-06-04 12:10:34] 2025-06-04 16:10:09,505 | INFO     | stage-out finished correctly
[2025-06-04 12:10:34] 2025-06-04 16:10:10,116 | WARNING  | process 2830290 can no longer be monitored (due to stat problems) - aborting
[2025-06-04 12:10:34] 2025-06-04 16:10:10,116 | INFO     | using path: /tmp/boinchome/slots/4/PanDA_Pilot-6679604663/memory_monitor_summary.json (trf name=prmon)
[2025-06-04 12:10:34] 2025-06-04 16:10:10,211 | INFO     | number of running child processes to parent process 2830290: 1
[2025-06-04 12:10:34] 2025-06-04 16:10:10,211 | INFO     | maximum number of monitored processes: 6
[2025-06-04 12:10:34] 2025-06-04 16:10:12,571 | INFO     | finished stage-out for finished payload, adding job to finished_jobs queue
[2025-06-04 12:10:34] 2025-06-04 16:10:12,614 | INFO     | job 6679604663 has state=finished
[2025-06-04 12:10:34] 2025-06-04 16:10:12,614 | INFO     | preparing for final server update for job 6679604663 in state='finished'
[2025-06-04 12:10:34] 2025-06-04 16:10:12,615 | INFO     | this job has now completed (state=finished)
[2025-06-04 12:10:34] 2025-06-04 16:10:12,615 | INFO     | pilot will not update the server (heartbeat message will be written to file)
[2025-06-04 12:10:34] 2025-06-04 16:10:12,615 | INFO     | log transfer has been attempted: DONE
[2025-06-04 12:10:34] 2025-06-04 16:10:12,615 | INFO     | job 6679604663 has finished - writing final server update
[2025-06-04 12:10:34] 2025-06-04 16:10:12,615 | INFO     | total number of processed events: 400 (read)
[2025-06-04 12:10:34] 2025-06-04 16:10:12,629 | INFO     | executing command: lscpu
[2025-06-04 12:10:34] 2025-06-04 16:10:12,686 | INFO     | executing command: export ATLAS_LOCAL_ROOT_BASE=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase;source ${ATLAS_LOCAL_ROOT_BASE}/user/atlasLocalSetup.sh --quiet;lsetup
[2025-06-04 12:10:34] 2025-06-04 16:10:12,713 | INFO     | monitor loop #373: job 0:6679604663 is in state 'finished'
[2025-06-04 12:10:34] 2025-06-04 16:10:12,713 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-06-04 12:10:34] 2025-06-04 16:10:14,946 | INFO     | CPU arch script returned: x86-64-v4
[2025-06-04 12:10:34] 2025-06-04 16:10:14,946 | INFO     | using path: /tmp/boinchome/slots/4/PanDA_Pilot-6679604663/memory_monitor_summary.json (trf name=prmon)
[2025-06-04 12:10:34] 2025-06-04 16:10:14,946 | INFO     | extracted standard info from prmon json
[2025-06-04 12:10:34] 2025-06-04 16:10:14,946 | INFO     | extracted standard memory fields from prmon json
[2025-06-04 12:10:34] 2025-06-04 16:10:14,947 | WARNING  | GPU info not found in prmon json: 'gpu'
[2025-06-04 12:10:34] 2025-06-04 16:10:14,947 | WARNING  | format EVNTtoHITS has no such key: dbData
[2025-06-04 12:10:34] 2025-06-04 16:10:14,947 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2025-06-04 12:10:34] 2025-06-04 16:10:14,948 | INFO     | fitting pss+swap vs Time
[2025-06-04 12:10:34] 2025-06-04 16:10:14,948 | INFO     | sum of square deviations: 125630262.5
[2025-06-04 12:10:34] 2025-06-04 16:10:14,948 | INFO     | sum of deviations: -1464187605.5000002
[2025-06-04 12:10:34] 2025-06-04 16:10:14,948 | INFO     | mean x: 1749051031.5
[2025-06-04 12:10:34] 2025-06-04 16:10:14,948 | INFO     | mean y: 2230982.878378378
[2025-06-04 12:10:34] 2025-06-04 16:10:14,948 | INFO     | -- intersect: 20386959875.005707
[2025-06-04 12:10:34] 2025-06-04 16:10:14,949 | INFO     | intersect: 20386959875.005707
[2025-06-04 12:10:34] 2025-06-04 16:10:14,949 | INFO     | chi2: 0.9551562282342609
[2025-06-04 12:10:34] 2025-06-04 16:10:14,949 | INFO     | -- intersect: 20386959875.005707
[2025-06-04 12:10:34] 2025-06-04 16:10:14,949 | INFO     | current memory leak: -11.65 B/s (using 74 data points, chi2=0.96)
[2025-06-04 12:10:34] 2025-06-04 16:10:14,949 | INFO     | ..............................
[2025-06-04 12:10:34] 2025-06-04 16:10:14,949 | INFO     | . Timing measurements:
[2025-06-04 12:10:34] 2025-06-04 16:10:14,949 | INFO     | . get job = 0 s
[2025-06-04 12:10:34] 2025-06-04 16:10:14,949 | INFO     | . initial setup = 2 s
[2025-06-04 12:10:34] 2025-06-04 16:10:14,949 | INFO     | . payload setup = 5 s
[2025-06-04 12:10:34] 2025-06-04 16:10:14,949 | INFO     | . stage-in = 0 s
[2025-06-04 12:10:34] 2025-06-04 16:10:14,949 | INFO     | . payload execution = 4909 s
[2025-06-04 12:10:34] 2025-06-04 16:10:14,949 | INFO     | . stage-out = 0 s
[2025-06-04 12:10:34] 2025-06-04 16:10:14,949 | INFO     | . log creation = 0 s
[2025-06-04 12:10:34] 2025-06-04 16:10:14,949 | INFO     | ..............................
[2025-06-04 12:10:34] 2025-06-04 16:10:14,995 | INFO     | 
[2025-06-04 12:10:34] 2025-06-04 16:10:14,995 | INFO     | job summary report
[2025-06-04 12:10:34] 2025-06-04 16:10:14,995 | INFO     | --------------------------------------------------
[2025-06-04 12:10:34] 2025-06-04 16:10:14,995 | INFO     | PanDA job id: 6679604663
[2025-06-04 12:10:34] 2025-06-04 16:10:14,995 | INFO     | task id: 44871837
[2025-06-04 12:10:34] 2025-06-04 16:10:14,995 | INFO     | errors: (none)
[2025-06-04 12:10:34] 2025-06-04 16:10:14,995 | INFO     | status: LOG_TRANSFER = DONE 
[2025-06-04 12:10:34] 2025-06-04 16:10:14,995 | INFO     | pilot state: finished 
[2025-06-04 12:10:34] 2025-06-04 16:10:14,995 | INFO     | transexitcode: 0
[2025-06-04 12:10:34] 2025-06-04 16:10:14,995 | INFO     | exeerrorcode: 0
[2025-06-04 12:10:34] 2025-06-04 16:10:14,995 | INFO     | exeerrordiag: 
[2025-06-04 12:10:34] 2025-06-04 16:10:14,995 | INFO     | exitcode: 0
[2025-06-04 12:10:34] 2025-06-04 16:10:14,995 | INFO     | exitmsg: OK
[2025-06-04 12:10:34] 2025-06-04 16:10:14,995 | INFO     | cpuconsumptiontime: 33775 s
[2025-06-04 12:10:34] 2025-06-04 16:10:14,995 | INFO     | nevents: 400
[2025-06-04 12:10:34] 2025-06-04 16:10:14,995 | INFO     | neventsw: 0
[2025-06-04 12:10:34] 2025-06-04 16:10:14,995 | INFO     | pid: 2830290
[2025-06-04 12:10:34] 2025-06-04 16:10:14,995 | INFO     | pgrp: 2830290
[2025-06-04 12:10:34] 2025-06-04 16:10:14,995 | INFO     | corecount: 8
[2025-06-04 12:10:34] 2025-06-04 16:10:14,995 | INFO     | event service: False
[2025-06-04 12:10:34] 2025-06-04 16:10:14,995 | INFO     | sizes: {0: 2396511, 1: 2397367, 5: 2397573, 12: 2397629, 4919: 2432802, 4923: 2432802, 4925: 2433100}
[2025-06-04 12:10:34] 2025-06-04 16:10:14,996 | INFO     | --------------------------------------------------
[2025-06-04 12:10:34] 2025-06-04 16:10:14,996 | INFO     | 
[2025-06-04 12:10:34] 2025-06-04 16:10:14,996 | INFO     | executing command: ls -lF /tmp/boinchome/slots/4
[2025-06-04 12:10:34] 2025-06-04 16:10:15,007 | INFO     | queue jobs had 0 job(s) [purged]
[2025-06-04 12:10:34] 2025-06-04 16:10:15,007 | INFO     | queue payloads had 0 job(s) [purged]
[2025-06-04 12:10:34] 2025-06-04 16:10:15,007 | INFO     | queue data_in had 0 job(s) [purged]
[2025-06-04 12:10:34] 2025-06-04 16:10:15,007 | INFO     | queue data_out had 0 job(s) [purged]
[2025-06-04 12:10:34] 2025-06-04 16:10:15,007 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-06-04 12:10:34] 2025-06-04 16:10:15,007 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-06-04 12:10:34] 2025-06-04 16:10:15,008 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-06-04 12:10:34] 2025-06-04 16:10:15,008 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-06-04 12:10:34] 2025-06-04 16:10:15,008 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-06-04 12:10:34] 2025-06-04 16:10:15,008 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-06-04 12:10:34] 2025-06-04 16:10:15,008 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-06-04 12:10:34] 2025-06-04 16:10:15,008 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-06-04 12:10:34] 2025-06-04 16:10:15,008 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-06-04 12:10:34] 2025-06-04 16:10:15,008 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-06-04 12:10:34] 2025-06-04 16:10:15,008 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-06-04 12:10:34] 2025-06-04 16:10:15,008 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-06-04 12:10:34] 2025-06-04 16:10:15,008 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-06-04 12:10:34] 2025-06-04 16:10:15,008 | INFO     | queue completed_jobids has 1 job(s)
[2025-06-04 12:10:34] 2025-06-04 16:10:15,008 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-06-04 12:10:34] 2025-06-04 16:10:15,008 | INFO     | queue messages had 0 job(s) [purged]
[2025-06-04 12:10:34] 2025-06-04 16:10:15,008 | INFO     | job 6679604663 has completed (purged errors)
[2025-06-04 12:10:34] 2025-06-04 16:10:15,008 | INFO     | overall cleanup function is called
[2025-06-04 12:10:34] 2025-06-04 16:10:16,015 | INFO     | --- collectZombieJob: --- 10, [2830290]
[2025-06-04 12:10:34] 2025-06-04 16:10:16,015 | INFO     | zombie collector waiting for pid 2830290
[2025-06-04 12:10:34] 2025-06-04 16:10:16,015 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-06-04 12:10:34] 2025-06-04 16:10:16,015 | INFO     | collected zombie processes
[2025-06-04 12:10:34] 2025-06-04 16:10:16,015 | INFO     | will attempt to kill all subprocesses of pid=2830290
[2025-06-04 12:10:34] 2025-06-04 16:10:16,110 | INFO     | process IDs to be killed: [2830290] (in reverse order)
[2025-06-04 12:10:34] 2025-06-04 16:10:16,148 | WARNING  | found no corresponding commands to process id(s)
[2025-06-04 12:10:34] 2025-06-04 16:10:16,148 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-06-04 12:10:34] 2025-06-04 16:10:16,152 | INFO     | did not find any defunct processes belonging to 2830290
[2025-06-04 12:10:34] 2025-06-04 16:10:16,155 | INFO     | did not find any defunct processes belonging to 2830290
[2025-06-04 12:10:34] 2025-06-04 16:10:16,155 | INFO     | ready for new job
[2025-06-04 12:10:34] 2025-06-04 16:10:16,155 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-06-04 12:10:34] 2025-06-04 16:10:16,156 | INFO     | **************************************
[2025-06-04 12:10:34] 2025-06-04 16:10:16,156 | INFO     | ***  PanDA Pilot version 3.10.2.2  ***
[2025-06-04 12:10:34] 2025-06-04 16:10:16,156 | INFO     | **************************************
[2025-06-04 12:10:34] 2025-06-04 16:10:16,156 | INFO     | 
[2025-06-04 12:10:34] 2025-06-04 16:10:16,170 | INFO     | architecture information:
[2025-06-04 12:10:34] 2025-06-04 16:10:16,171 | INFO     | executing command: cat /etc/os-release
[2025-06-04 12:10:34] 2025-06-04 16:10:16,179 | INFO     | cat /etc/os-release:
[2025-06-04 12:10:34] NAME="CentOS Linux"
[2025-06-04 12:10:34] VERSION="7 (Core)"
[2025-06-04 12:10:34] ID="centos"
[2025-06-04 12:10:34] ID_LIKE="rhel fedora"
[2025-06-04 12:10:34] VERSION_ID="7"
[2025-06-04 12:10:34] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-06-04 12:10:34] ANSI_COLOR="0;31"
[2025-06-04 12:10:34] CPE_NAME="cpe:/o:centos:centos:7"
[2025-06-04 12:10:34] HOME_URL="https://www.centos.org/"
[2025-06-04 12:10:34] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-06-04 12:10:34] 
[2025-06-04 12:10:34] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-06-04 12:10:34] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-06-04 12:10:34] REDHAT_SUPPORT_PRODUCT="centos"
[2025-06-04 12:10:34] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-06-04 12:10:34] 
[2025-06-04 12:10:34] 2025-06-04 16:10:16,179 | INFO     | **************************************
[2025-06-04 12:10:34] 2025-06-04 16:10:16,681 | INFO     | executing command: df -mP /tmp/boinchome/slots/4
[2025-06-04 12:10:34] 2025-06-04 16:10:16,691 | INFO     | sufficient remaining disk space (73718038528 B)
[2025-06-04 12:10:34] 2025-06-04 16:10:16,691 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-06-04 12:10:34] 2025-06-04 16:10:16,691 | INFO     | current server update state: UPDATING_FINAL
[2025-06-04 12:10:34] 2025-06-04 16:10:16,691 | INFO     | update_server=False
[2025-06-04 12:10:34] 2025-06-04 16:10:16,692 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-06-04 12:10:34] 2025-06-04 16:10:16,692 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-06-04 12:10:34] 2025-06-04 16:10:16,692 | WARNING  | aborting monitor loop since graceful_stop has been set (timing out remaining threads)
[2025-06-04 12:10:34] 2025-06-04 16:10:16,692 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-06-04 12:10:34] 2025-06-04 16:10:16,693 | INFO     | found 0 job(s) in 20 queues
[2025-06-04 12:10:34] 2025-06-04 16:10:16,693 | INFO     | aborting loop
[2025-06-04 12:10:34] 2025-06-04 16:10:16,693 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-06-04 12:10:34] 2025-06-04 16:10:16,693 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-06-04 12:10:34] 2025-06-04 16:10:16,888 | INFO     | all data control threads have been joined
[2025-06-04 12:10:34] 2025-06-04 16:10:17,558 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-06-04 12:10:34] 2025-06-04 16:10:17,616 | INFO     | all job control threads have been joined
[2025-06-04 12:10:34] 2025-06-04 16:10:17,697 | INFO     | [job] retrieve thread has finished
[2025-06-04 12:10:34] 2025-06-04 16:10:17,697 | INFO     | [job] queue monitor thread has finished
[2025-06-04 12:10:34] 2025-06-04 16:10:17,698 | INFO     | [job] job monitor thread has finished
[2025-06-04 12:10:34] 2025-06-04 16:10:17,894 | INFO     | [data] control thread has finished
[2025-06-04 12:10:34] 2025-06-04 16:10:18,016 | INFO     | all payload control threads have been joined
[2025-06-04 12:10:34] 2025-06-04 16:10:18,038 | INFO     | [payload] failed_post thread has finished
[2025-06-04 12:10:34] 2025-06-04 16:10:18,049 | INFO     | [data] copytool_in thread has finished
[2025-06-04 12:10:34] 2025-06-04 16:10:18,434 | INFO     | [job] validate thread has finished
[2025-06-04 12:10:34] 2025-06-04 16:10:18,620 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-06-04 12:10:34] 2025-06-04 16:10:18,621 | INFO     | [job] control thread has finished
[2025-06-04 12:10:34] 2025-06-04 16:10:18,633 | INFO     | [payload] execute_payloads thread has finished
[2025-06-04 12:10:34] 2025-06-04 16:10:18,664 | INFO     | [job] create_data_payload thread has finished
[2025-06-04 12:10:34] 2025-06-04 16:10:18,771 | INFO     | [payload] validate_pre thread has finished
[2025-06-04 12:10:34] 2025-06-04 16:10:19,021 | INFO     | [payload] control thread has finished
[2025-06-04 12:10:34] 2025-06-04 16:10:19,284 | INFO     | [payload] validate_post thread has finished
[2025-06-04 12:10:34] 2025-06-04 16:10:19,564 | INFO     | [data] copytool_out thread has finished
[2025-06-04 12:10:34] 2025-06-04 16:10:22,625 | INFO     | [data] queue_monitor thread has finished
[2025-06-04 12:10:34] 2025-06-04 16:10:26,794 | INFO     | job.realtimelogging is not enabled
[2025-06-04 12:10:34] 2025-06-04 16:10:27,799 | INFO     | [payload] run_realtimelog thread has finished
[2025-06-04 12:10:34] 2025-06-04 16:10:29,526 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140568487552832)>', '<ExcThread(monitor, started 140567761643264)>']
[2025-06-04 12:10:34] 2025-06-04 16:10:29,743 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-06-04 12:10:34] 2025-06-04 16:10:29,743 | INFO     | [monitor] control thread has ended
[2025-06-04 12:10:34] 2025-06-04 16:10:34,551 | INFO     | all workflow threads have been joined
[2025-06-04 12:10:34] 2025-06-04 16:10:34,552 | INFO     | end of generic workflow (traces error code: 0)
[2025-06-04 12:10:34] 2025-06-04 16:10:34,552 | INFO     | traces error code: 0
[2025-06-04 12:10:34] 2025-06-04 16:10:34,552 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-06-04 12:10:34] 2025-06-04 16:10:34,631 [wrapper] ==== pilot stdout END ====
[2025-06-04 12:10:34] 2025-06-04 16:10:34,633 [wrapper] ==== wrapper stdout RESUME ====
[2025-06-04 12:10:34] 2025-06-04 16:10:34,635 [wrapper] pilotpid: 2823386
[2025-06-04 12:10:34] 2025-06-04 16:10:34,636 [wrapper] Pilot exit status: 0
[2025-06-04 12:10:34] 2025-06-04 16:10:34,643 [wrapper] pandaids: 6679604663
[2025-06-04 12:10:34] 2025-06-04 16:10:34,668 [wrapper] cleanup supervisor_pilot 3017679 2823387
[2025-06-04 12:10:34] 2025-06-04 16:10:34,670 [wrapper] Test setup, not cleaning
[2025-06-04 12:10:34] 2025-06-04 16:10:34,671 [wrapper] apfmon messages muted
[2025-06-04 12:10:34] 2025-06-04 16:10:34,673 [wrapper] ==== wrapper stdout END ====
[2025-06-04 12:10:34] 2025-06-04 16:10:34,675 [wrapper] ==== wrapper stderr END ====
[2025-06-04 12:10:34]  *** Error codes and diagnostics ***
[2025-06-04 12:10:34]     "exeErrorCode": 0,
[2025-06-04 12:10:34]     "exeErrorDiag": "",
[2025-06-04 12:10:34]     "pilotErrorCode": 0,
[2025-06-04 12:10:34]     "pilotErrorDiag": "",
[2025-06-04 12:10:34]  *** Listing of results directory ***
[2025-06-04 12:10:34] total 420776
[2025-06-04 12:10:34] -rw-r--r--. 1 boincer umatlas    495897 Jun  4 05:32 pilot3.tar.gz
[2025-06-04 12:10:34] -rwx------. 1 boincer umatlas     37140 Jun  4 06:02 runpilot2-wrapper.sh
[2025-06-04 12:10:34] -rw-r--r--. 1 boincer umatlas      5111 Jun  4 06:02 queuedata.json
[2025-06-04 12:10:34] -rw-r--r--. 1 boincer umatlas       100 Jun  4 10:47 wrapper_26015_x86_64-pc-linux-gnu
[2025-06-04 12:10:34] -rwxr-xr-x. 1 boincer umatlas      7986 Jun  4 10:47 run_atlas
[2025-06-04 12:10:34] -rw-r--r--. 1 boincer umatlas       105 Jun  4 10:47 job.xml
[2025-06-04 12:10:34] -rw-r--r--. 2 boincer umatlas 225920400 Jun  4 10:47 EVNT.44871834._002743.pool.root.1
[2025-06-04 12:10:34] -rw-r--r--. 2 boincer umatlas     15093 Jun  4 10:47 start_atlas.sh
[2025-06-04 12:10:34] drwxrwx--x. 2 boincer umatlas      4096 Jun  4 10:47 shared
[2025-06-04 12:10:34] -rw-r--r--. 2 boincer umatlas    508875 Jun  4 10:47 input.tar.gz
[2025-06-04 12:10:34] -rw-r--r--. 1 boincer umatlas         0 Jun  4 10:47 boinc_lockfile
[2025-06-04 12:10:34] -rw-r--r--. 1 boincer umatlas      2557 Jun  4 10:47 pandaJob.out
[2025-06-04 12:10:34] -rw-------. 1 boincer umatlas    987207 Jun  4 10:47 agis_schedconf.cvmfs.json
[2025-06-04 12:10:34] -rw-------. 1 boincer umatlas   1598969 Jun  4 10:47 agis_ddmendpoints.agis.ALL.json
[2025-06-04 12:10:34] drwx------. 4 boincer umatlas      4096 Jun  4 10:47 pilot3
[2025-06-04 12:10:34] -rw-r--r--. 1 boincer umatlas      6841 Jun  4 12:03 init_data.xml
[2025-06-04 12:10:34] -rw-------. 1 boincer umatlas 199538778 Jun  4 12:09 HITS.44871837._102202.pool.root.1
[2025-06-04 12:10:34] -rw-r--r--. 1 boincer umatlas       529 Jun  4 12:09 boinc_task_state.xml
[2025-06-04 12:10:34] -rw-------. 1 boincer umatlas        95 Jun  4 12:09 pilot_heartbeat.json
[2025-06-04 12:10:34] -rw-------. 1 boincer umatlas      1033 Jun  4 12:10 memory_monitor_summary.json
[2025-06-04 12:10:34] -rw-------. 1 boincer umatlas    296220 Jun  4 12:10 log.44871837._102202.job.log.tgz.1
[2025-06-04 12:10:34] -rw-------. 1 boincer umatlas      7708 Jun  4 12:10 heartbeat.json
[2025-06-04 12:10:34] -rw-r--r--. 1 boincer umatlas      8192 Jun  4 12:10 boinc_mmap_file
[2025-06-04 12:10:34] -rw-r--r--. 1 boincer umatlas        27 Jun  4 12:10 wrapper_checkpoint.txt
[2025-06-04 12:10:34] -rw-------. 1 boincer umatlas      4548 Jun  4 12:10 pilotlog.txt
[2025-06-04 12:10:34] -rw-------. 1 boincer umatlas    488484 Jun  4 12:10 log.44871837._102202.job.log.1
[2025-06-04 12:10:34] -rw-------. 1 boincer umatlas       357 Jun  4 12:10 output.list
[2025-06-04 12:10:34] -rw-r--r--. 1 boincer umatlas       620 Jun  4 12:10 runtime_log
[2025-06-04 12:10:34] -rw-------. 1 boincer umatlas    808960 Jun  4 12:10 result.tar.gz
[2025-06-04 12:10:34] -rw-r--r--. 1 boincer umatlas      8659 Jun  4 12:10 runtime_log.err
[2025-06-04 12:10:34] -rw-------. 1 boincer umatlas       652 Jun  4 12:10 ICENDmE8zg7nsSi4ap6QjLDmwznN0nGgGQJmUXzaDmfxnKDmtlrh0m.diag
[2025-06-04 12:10:34] -rw-r--r--. 1 boincer umatlas     21361 Jun  4 12:10 stderr.txt
[2025-06-04 12:10:34] HITS file was successfully produced:
[2025-06-04 12:10:34] -rw-------. 1 boincer umatlas 199538778 Jun  4 12:09 shared/HITS.pool.root.1
[2025-06-04 12:10:34]  *** Contents of shared directory: ***
[2025-06-04 12:10:34] total 416808
[2025-06-04 12:10:34] -rw-r--r--. 2 boincer umatlas 225920400 Jun  4 10:47 ATLAS.root_0
[2025-06-04 12:10:34] -rw-r--r--. 2 boincer umatlas     15093 Jun  4 10:47 start_atlas.sh
[2025-06-04 12:10:34] -rw-r--r--. 2 boincer umatlas    508875 Jun  4 10:47 input.tar.gz
[2025-06-04 12:10:34] -rw-------. 1 boincer umatlas 199538778 Jun  4 12:09 HITS.pool.root.1
[2025-06-04 12:10:34] -rw-------. 1 boincer umatlas    808960 Jun  4 12:10 result.tar.gz
12:10:36 (2819816): run_atlas exited; CPU time 33866.926285
12:10:36 (2819816): called boinc_finish(0)

</stderr_txt>
]]>

©2025 CERN