Stderr output

<core_client_version>7.7.0</core_client_version>
<![CDATA[
<stderr_txt>
11:25:49 (78888): wrapper (7.7.26015): starting
11:25:49 (78888): wrapper: running run_atlas (--nthreads 9)
[2025-06-04 11:25:49] Arguments: --nthreads 9
[2025-06-04 11:25:49] Threads: 9
[2025-06-04 11:25:49] Checking for CVMFS
[2025-06-04 11:25:50] Probing /cvmfs/atlas.cern.ch... OK
[2025-06-04 11:25:50] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-06-04 11:25:50] Running cvmfs_config stat atlas.cern.ch
[2025-06-04 11:25:50] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-06-04 11:25:50] 2.11.2.0 6489 28960 270004 146786 3 65 15894887 18432000 5592 130560 1 67707428 99.427 81305425 29389 http://cvmfs-s1fnal.opensciencegrid.org:8000/cvmfs/atlas.cern.ch http://192.41.237.109:6081 1
[2025-06-04 11:25:50] CVMFS is ok
[2025-06-04 11:25:50] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-06-04 11:25:50] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2025-06-04 11:25:50] Further information can be found at the LHC@home message board.
[2025-06-04 11:25:50] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-06-04 11:25:50] Checking for apptainer binary...
[2025-06-04 11:25:50] Using apptainer found in PATH at /usr/bin/apptainer
[2025-06-04 11:25:50] Running /usr/bin/apptainer --version
[2025-06-04 11:25:51] apptainer version 1.3.2-1.el7
[2025-06-04 11:25:51] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-06-04 11:25:51] c-210-31-2.aglt2.org
[2025-06-04 11:25:51] apptainer works
[2025-06-04 11:25:52] Set ATHENA_PROC_NUMBER=9
[2025-06-04 11:25:52] Set ATHENA_CORE_NUMBER=9
[2025-06-04 11:25:52] Starting ATLAS job with PandaID=6679791548
[2025-06-04 11:25:52] Running command: /usr/bin/apptainer exec -B /cvmfs,/tmp/boinchome/slots/0 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-06-04 12:20:43]  *** The last 200 lines of the pilot log: ***
[2025-06-04 12:20:43]  replicas=None
[2025-06-04 12:20:43]  scope=mc23_13p6TeV
[2025-06-04 12:20:43]  status=None
[2025-06-04 12:20:43]  status_code=0
[2025-06-04 12:20:43]  storage_token=
[2025-06-04 12:20:43]  surl=/tmp/boinchome/slots/0/PanDA_Pilot-6679791548/log.45006595._056718.job.log.tgz.1
[2025-06-04 12:20:43]  turl=davs://dav.ndgf.org:443/atlas/disk/atlasdatadisk/rucio/mc23_13p6TeV/30/c1/log.45006595._056718.job.log.tgz.1
[2025-06-04 12:20:43]  workdir=None
[2025-06-04 12:20:43] ]
[2025-06-04 12:20:43] 2025-06-04 16:20:12,062 | INFO     | transferring file log.45006595._056718.job.log.tgz.1 from /tmp/boinchome/slots/0/PanDA_Pilot-6679791548/log.45006595._056718.job.log.tgz.1 to /tmp/boinchome/slots/
[2025-06-04 12:20:43] 2025-06-04 16:20:12,062 | INFO     | executing command: /usr/bin/env mv /tmp/boinchome/slots/0/PanDA_Pilot-6679791548/log.45006595._056718.job.log.tgz.1 /tmp/boinchome/slots/0/log.45006595._056718.job
[2025-06-04 12:20:43] 2025-06-04 16:20:12,090 | INFO     | adding to output.list: log.45006595._056718.job.log.tgz.1 davs://dav.ndgf.org:443/atlas/disk/atlasdatadisk/rucio/mc23_13p6TeV/30/c1/log.45006595._056718.job.log.tg
[2025-06-04 12:20:43] 2025-06-04 16:20:12,091 | INFO     | alt stage-out settings: ['pl', 'write_lan', 'w', 'default'], allow_altstageout=False, remain_files=0, has_altstorage=True
[2025-06-04 12:20:43] 2025-06-04 16:20:12,091 | INFO     | summary of transferred files:
[2025-06-04 12:20:43] 2025-06-04 16:20:12,091 | INFO     |  -- lfn=log.45006595._056718.job.log.tgz.1, status_code=0, status=transferred
[2025-06-04 12:20:43] 2025-06-04 16:20:12,092 | INFO     | stage-out finished correctly
[2025-06-04 12:20:43] 2025-06-04 16:20:13,323 | INFO     | finished stage-out for finished payload, adding job to finished_jobs queue
[2025-06-04 12:20:43] 2025-06-04 16:20:13,425 | INFO     | monitor loop #250: job 0:6679791548 is in state 'finished'
[2025-06-04 12:20:43] 2025-06-04 16:20:13,425 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-06-04 12:20:43] 2025-06-04 16:20:13,928 | INFO     | PID=82512 has CPU usage=6.3% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i PR 
[2025-06-04 12:20:43] 2025-06-04 16:20:13,928 | INFO     | .. there are 8 such processes running
[2025-06-04 12:20:43] 2025-06-04 16:20:15,281 | INFO     | job 6679791548 has state=finished
[2025-06-04 12:20:43] 2025-06-04 16:20:15,282 | INFO     | preparing for final server update for job 6679791548 in state='finished'
[2025-06-04 12:20:43] 2025-06-04 16:20:15,282 | INFO     | this job has now completed (state=finished)
[2025-06-04 12:20:43] 2025-06-04 16:20:15,282 | INFO     | pilot will not update the server (heartbeat message will be written to file)
[2025-06-04 12:20:43] 2025-06-04 16:20:15,283 | INFO     | log transfer has been attempted: DONE
[2025-06-04 12:20:43] 2025-06-04 16:20:15,283 | INFO     | job 6679791548 has finished - writing final server update
[2025-06-04 12:20:43] 2025-06-04 16:20:15,283 | INFO     | total number of processed events: 400 (read)
[2025-06-04 12:20:43] 2025-06-04 16:20:15,290 | INFO     | executing command: lscpu
[2025-06-04 12:20:43] 2025-06-04 16:20:15,351 | INFO     | executing command: export ATLAS_LOCAL_ROOT_BASE=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase;source ${ATLAS_LOCAL_ROOT_BASE}/user/atlasLocalSetup.sh --quiet;lsetup
[2025-06-04 12:20:43] 2025-06-04 16:20:15,927 | INFO     | monitor loop #251: job 0:6679791548 is in state 'finished'
[2025-06-04 12:20:43] 2025-06-04 16:20:15,927 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-06-04 12:20:43] 2025-06-04 16:20:18,430 | INFO     | monitor loop #252: job 0:6679791548 is in state 'finished'
[2025-06-04 12:20:43] 2025-06-04 16:20:18,430 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-06-04 12:20:43] 2025-06-04 16:20:20,933 | INFO     | monitor loop #253: job 0:6679791548 is in state 'finished'
[2025-06-04 12:20:43] 2025-06-04 16:20:20,934 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-06-04 12:20:43] 2025-06-04 16:20:23,437 | INFO     | monitor loop #254: job 0:6679791548 is in state 'finished'
[2025-06-04 12:20:43] 2025-06-04 16:20:23,437 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-06-04 12:20:43] 2025-06-04 16:20:23,756 | INFO     | CPU arch script returned: x86-64-v4
[2025-06-04 12:20:43] 2025-06-04 16:20:23,756 | INFO     | using path: /tmp/boinchome/slots/0/PanDA_Pilot-6679791548/memory_monitor_summary.json (trf name=prmon)
[2025-06-04 12:20:43] 2025-06-04 16:20:23,758 | INFO     | extracted standard info from prmon json
[2025-06-04 12:20:43] 2025-06-04 16:20:23,758 | INFO     | extracted standard memory fields from prmon json
[2025-06-04 12:20:43] 2025-06-04 16:20:23,758 | WARNING  | GPU info not found in prmon json: 'gpu'
[2025-06-04 12:20:43] 2025-06-04 16:20:23,759 | WARNING  | format EVNTtoHITS has no such key: dbData
[2025-06-04 12:20:43] 2025-06-04 16:20:23,759 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2025-06-04 12:20:43] 2025-06-04 16:20:23,761 | INFO     | fitting pss+swap vs Time
[2025-06-04 12:20:43] 2025-06-04 16:20:23,762 | INFO     | sum of square deviations: 30168007.5
[2025-06-04 12:20:43] 2025-06-04 16:20:23,762 | INFO     | sum of deviations: -2171207251.5
[2025-06-04 12:20:43] 2025-06-04 16:20:23,762 | INFO     | mean x: 1749052470.5
[2025-06-04 12:20:43] 2025-06-04 16:20:23,763 | INFO     | mean y: 2772707.7608695654
[2025-06-04 12:20:43] 2025-06-04 16:20:23,763 | INFO     | -- intersect: 125882992248.39809
[2025-06-04 12:20:43] 2025-06-04 16:20:23,763 | INFO     | intersect: 125882992248.39809
[2025-06-04 12:20:43] 2025-06-04 16:20:23,763 | INFO     | chi2: 0.04912375912004374
[2025-06-04 12:20:43] 2025-06-04 16:20:23,763 | INFO     | -- intersect: 125882992248.39809
[2025-06-04 12:20:43] 2025-06-04 16:20:23,764 | INFO     | current memory leak: -71.97 B/s (using 46 data points, chi2=0.05)
[2025-06-04 12:20:43] 2025-06-04 16:20:23,764 | INFO     | ..............................
[2025-06-04 12:20:43] 2025-06-04 16:20:23,764 | INFO     | . Timing measurements:
[2025-06-04 12:20:43] 2025-06-04 16:20:23,764 | INFO     | . get job = 0 s
[2025-06-04 12:20:43] 2025-06-04 16:20:23,765 | INFO     | . initial setup = 2 s
[2025-06-04 12:20:43] 2025-06-04 16:20:23,765 | INFO     | . payload setup = 7 s
[2025-06-04 12:20:43] 2025-06-04 16:20:23,765 | INFO     | . stage-in = 0 s
[2025-06-04 12:20:43] 2025-06-04 16:20:23,765 | INFO     | . payload execution = 3220 s
[2025-06-04 12:20:43] 2025-06-04 16:20:23,765 | INFO     | . stage-out = 0 s
[2025-06-04 12:20:43] 2025-06-04 16:20:23,765 | INFO     | . log creation = 0 s
[2025-06-04 12:20:43] 2025-06-04 16:20:23,765 | INFO     | ..............................
[2025-06-04 12:20:43] 2025-06-04 16:20:23,837 | INFO     | 
[2025-06-04 12:20:43] 2025-06-04 16:20:23,837 | INFO     | job summary report
[2025-06-04 12:20:43] 2025-06-04 16:20:23,837 | INFO     | --------------------------------------------------
[2025-06-04 12:20:43] 2025-06-04 16:20:23,837 | INFO     | PanDA job id: 6679791548
[2025-06-04 12:20:43] 2025-06-04 16:20:23,838 | INFO     | task id: 45006595
[2025-06-04 12:20:43] 2025-06-04 16:20:23,838 | INFO     | errors: (none)
[2025-06-04 12:20:43] 2025-06-04 16:20:23,838 | INFO     | status: LOG_TRANSFER = DONE 
[2025-06-04 12:20:43] 2025-06-04 16:20:23,838 | INFO     | pilot state: finished 
[2025-06-04 12:20:43] 2025-06-04 16:20:23,838 | INFO     | transexitcode: 0
[2025-06-04 12:20:43] 2025-06-04 16:20:23,838 | INFO     | exeerrorcode: 0
[2025-06-04 12:20:43] 2025-06-04 16:20:23,838 | INFO     | exeerrordiag: 
[2025-06-04 12:20:43] 2025-06-04 16:20:23,839 | INFO     | exitcode: 0
[2025-06-04 12:20:43] 2025-06-04 16:20:23,839 | INFO     | exitmsg: OK
[2025-06-04 12:20:43] 2025-06-04 16:20:23,839 | INFO     | cpuconsumptiontime: 26363 s
[2025-06-04 12:20:43] 2025-06-04 16:20:23,839 | INFO     | nevents: 400
[2025-06-04 12:20:43] 2025-06-04 16:20:23,839 | INFO     | neventsw: 0
[2025-06-04 12:20:43] 2025-06-04 16:20:23,839 | INFO     | pid: 90960
[2025-06-04 12:20:43] 2025-06-04 16:20:23,839 | INFO     | pgrp: 90960
[2025-06-04 12:20:43] 2025-06-04 16:20:23,840 | INFO     | corecount: 9
[2025-06-04 12:20:43] 2025-06-04 16:20:23,840 | INFO     | event service: False
[2025-06-04 12:20:43] 2025-06-04 16:20:23,840 | INFO     | sizes: {0: 2397120, 1: 2397319, 5: 2397525, 11: 2397581, 3232: 2432019, 3233: 2432019, 3244: 2432317}
[2025-06-04 12:20:43] 2025-06-04 16:20:23,840 | INFO     | --------------------------------------------------
[2025-06-04 12:20:43] 2025-06-04 16:20:23,840 | INFO     | 
[2025-06-04 12:20:43] 2025-06-04 16:20:23,840 | INFO     | executing command: ls -lF /tmp/boinchome/slots/0
[2025-06-04 12:20:43] 2025-06-04 16:20:23,872 | INFO     | queue jobs had 0 job(s) [purged]
[2025-06-04 12:20:43] 2025-06-04 16:20:23,873 | INFO     | queue payloads had 0 job(s) [purged]
[2025-06-04 12:20:43] 2025-06-04 16:20:23,873 | INFO     | queue data_in had 0 job(s) [purged]
[2025-06-04 12:20:43] 2025-06-04 16:20:23,873 | INFO     | queue data_out had 0 job(s) [purged]
[2025-06-04 12:20:43] 2025-06-04 16:20:23,873 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-06-04 12:20:43] 2025-06-04 16:20:23,873 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-06-04 12:20:43] 2025-06-04 16:20:23,874 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-06-04 12:20:43] 2025-06-04 16:20:23,874 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-06-04 12:20:43] 2025-06-04 16:20:23,874 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-06-04 12:20:43] 2025-06-04 16:20:23,874 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-06-04 12:20:43] 2025-06-04 16:20:23,874 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-06-04 12:20:43] 2025-06-04 16:20:23,874 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-06-04 12:20:43] 2025-06-04 16:20:23,874 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-06-04 12:20:43] 2025-06-04 16:20:23,875 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-06-04 12:20:43] 2025-06-04 16:20:23,875 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-06-04 12:20:43] 2025-06-04 16:20:23,875 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-06-04 12:20:43] 2025-06-04 16:20:23,875 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-06-04 12:20:43] 2025-06-04 16:20:23,875 | INFO     | queue completed_jobids has 1 job(s)
[2025-06-04 12:20:43] 2025-06-04 16:20:23,875 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-06-04 12:20:43] 2025-06-04 16:20:23,875 | INFO     | queue messages had 0 job(s) [purged]
[2025-06-04 12:20:43] 2025-06-04 16:20:23,876 | INFO     | job 6679791548 has completed (purged errors)
[2025-06-04 12:20:43] 2025-06-04 16:20:23,876 | INFO     | overall cleanup function is called
[2025-06-04 12:20:43] 2025-06-04 16:20:24,885 | INFO     | --- collectZombieJob: --- 10, [90960]
[2025-06-04 12:20:43] 2025-06-04 16:20:24,886 | INFO     | zombie collector waiting for pid 90960
[2025-06-04 12:20:43] 2025-06-04 16:20:24,886 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-06-04 12:20:43] 2025-06-04 16:20:24,886 | INFO     | collected zombie processes
[2025-06-04 12:20:43] 2025-06-04 16:20:24,886 | INFO     | will attempt to kill all subprocesses of pid=90960
[2025-06-04 12:20:43] 2025-06-04 16:20:25,006 | INFO     | process IDs to be killed: [90960] (in reverse order)
[2025-06-04 12:20:43] 2025-06-04 16:20:25,078 | WARNING  | found no corresponding commands to process id(s)
[2025-06-04 12:20:43] 2025-06-04 16:20:25,079 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-06-04 12:20:43] 2025-06-04 16:20:25,090 | INFO     | did not find any defunct processes belonging to 90960
[2025-06-04 12:20:43] 2025-06-04 16:20:25,096 | INFO     | did not find any defunct processes belonging to 90960
[2025-06-04 12:20:43] 2025-06-04 16:20:25,096 | INFO     | ready for new job
[2025-06-04 12:20:43] 2025-06-04 16:20:25,096 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-06-04 12:20:43] 2025-06-04 16:20:25,097 | INFO     | **************************************
[2025-06-04 12:20:43] 2025-06-04 16:20:25,098 | INFO     | ***  PanDA Pilot version 3.10.2.2  ***
[2025-06-04 12:20:43] 2025-06-04 16:20:25,098 | INFO     | **************************************
[2025-06-04 12:20:43] 2025-06-04 16:20:25,098 | INFO     | 
[2025-06-04 12:20:43] 2025-06-04 16:20:25,100 | INFO     | architecture information:
[2025-06-04 12:20:43] 2025-06-04 16:20:25,101 | INFO     | executing command: cat /etc/os-release
[2025-06-04 12:20:43] 2025-06-04 16:20:25,123 | INFO     | cat /etc/os-release:
[2025-06-04 12:20:43] NAME="CentOS Linux"
[2025-06-04 12:20:43] VERSION="7 (Core)"
[2025-06-04 12:20:43] ID="centos"
[2025-06-04 12:20:43] ID_LIKE="rhel fedora"
[2025-06-04 12:20:43] VERSION_ID="7"
[2025-06-04 12:20:43] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-06-04 12:20:43] ANSI_COLOR="0;31"
[2025-06-04 12:20:43] CPE_NAME="cpe:/o:centos:centos:7"
[2025-06-04 12:20:43] HOME_URL="https://www.centos.org/"
[2025-06-04 12:20:43] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-06-04 12:20:43] 
[2025-06-04 12:20:43] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-06-04 12:20:43] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-06-04 12:20:43] REDHAT_SUPPORT_PRODUCT="centos"
[2025-06-04 12:20:43] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-06-04 12:20:43] 
[2025-06-04 12:20:43] 2025-06-04 16:20:25,123 | INFO     | **************************************
[2025-06-04 12:20:43] 2025-06-04 16:20:25,625 | INFO     | executing command: df -mP /tmp/boinchome/slots/0
[2025-06-04 12:20:43] 2025-06-04 16:20:25,651 | INFO     | sufficient remaining disk space (57628688384 B)
[2025-06-04 12:20:43] 2025-06-04 16:20:25,652 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-06-04 12:20:43] 2025-06-04 16:20:25,652 | INFO     | current server update state: UPDATING_FINAL
[2025-06-04 12:20:43] 2025-06-04 16:20:25,652 | INFO     | update_server=False
[2025-06-04 12:20:43] 2025-06-04 16:20:25,652 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-06-04 12:20:43] 2025-06-04 16:20:25,653 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-06-04 12:20:43] 2025-06-04 16:20:25,653 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-06-04 12:20:43] 2025-06-04 16:20:25,941 | WARNING  | job monitor detected an abort_job request (signal=args.signal)
[2025-06-04 12:20:43] 2025-06-04 16:20:25,941 | WARNING  | cannot recover job monitoring - aborting pilot
[2025-06-04 12:20:43] 2025-06-04 16:20:25,942 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-06-04 12:20:43] 2025-06-04 16:20:25,942 | INFO     | will abort loop
[2025-06-04 12:20:43] 2025-06-04 16:20:25,954 | INFO     | found 0 job(s) in 20 queues
[2025-06-04 12:20:43] 2025-06-04 16:20:25,954 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-06-04 12:20:43] 2025-06-04 16:20:25,955 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-06-04 12:20:43] 2025-06-04 16:20:26,424 | INFO     | all data control threads have been joined
[2025-06-04 12:20:43] 2025-06-04 16:20:26,549 | INFO     | all payload control threads have been joined
[2025-06-04 12:20:43] 2025-06-04 16:20:26,658 | INFO     | [job] retrieve thread has finished
[2025-06-04 12:20:43] 2025-06-04 16:20:26,659 | INFO     | [job] queue monitor thread has finished
[2025-06-04 12:20:43] 2025-06-04 16:20:26,661 | INFO     | all job control threads have been joined
[2025-06-04 12:20:43] 2025-06-04 16:20:26,917 | INFO     | [payload] validate_post thread has finished
[2025-06-04 12:20:43] 2025-06-04 16:20:26,948 | INFO     | [job] job monitor thread has finished
[2025-06-04 12:20:43] 2025-06-04 16:20:27,430 | INFO     | [data] control thread has finished
[2025-06-04 12:20:43] 2025-06-04 16:20:27,455 | INFO     | [payload] execute_payloads thread has finished
[2025-06-04 12:20:43] 2025-06-04 16:20:27,554 | INFO     | [payload] control thread has finished
[2025-06-04 12:20:43] 2025-06-04 16:20:27,567 | INFO     | [payload] failed_post thread has finished
[2025-06-04 12:20:43] 2025-06-04 16:20:27,663 | INFO     | [data] copytool_out thread has finished
[2025-06-04 12:20:43] 2025-06-04 16:20:27,667 | INFO     | [job] control thread has finished
[2025-06-04 12:20:43] 2025-06-04 16:20:27,880 | INFO     | [job] validate thread has finished
[2025-06-04 12:20:43] 2025-06-04 16:20:27,923 | INFO     | [payload] validate_pre thread has finished
[2025-06-04 12:20:43] 2025-06-04 16:20:28,034 | INFO     | [data] copytool_in thread has finished
[2025-06-04 12:20:43] 2025-06-04 16:20:28,079 | INFO     | [job] create_data_payload thread has finished
[2025-06-04 12:20:43] 2025-06-04 16:20:28,388 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-06-04 12:20:43] 2025-06-04 16:20:32,394 | INFO     | [data] queue_monitor thread has finished
[2025-06-04 12:20:43] 2025-06-04 16:20:35,762 | INFO     | job.realtimelogging is not enabled
[2025-06-04 12:20:43] 2025-06-04 16:20:36,767 | INFO     | [payload] run_realtimelog thread has finished
[2025-06-04 12:20:43] 2025-06-04 16:20:37,887 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140390008674112)>', '<ExcThread(monitor, started 140388899735296)>']
[2025-06-04 12:20:43] 2025-06-04 16:20:38,007 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-06-04 12:20:43] 2025-06-04 16:20:38,007 | INFO     | [monitor] control thread has ended
[2025-06-04 12:20:43] 2025-06-04 16:20:42,912 | INFO     | all workflow threads have been joined
[2025-06-04 12:20:43] 2025-06-04 16:20:42,912 | INFO     | end of generic workflow (traces error code: 0)
[2025-06-04 12:20:43] 2025-06-04 16:20:42,913 | INFO     | traces error code: 0
[2025-06-04 12:20:43] 2025-06-04 16:20:42,913 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-06-04 12:20:43] 2025-06-04 16:20:43,042 [wrapper] ==== pilot stdout END ====
[2025-06-04 12:20:43] 2025-06-04 16:20:43,046 [wrapper] ==== wrapper stdout RESUME ====
[2025-06-04 12:20:43] 2025-06-04 16:20:43,051 [wrapper] pilotpid: 82512
[2025-06-04 12:20:43] 2025-06-04 16:20:43,055 [wrapper] Pilot exit status: 0
[2025-06-04 12:20:43] 2025-06-04 16:20:43,072 [wrapper] pandaids: 6679791548
[2025-06-04 12:20:43] 2025-06-04 16:20:43,127 [wrapper] cleanup supervisor_pilot 155036 82513
[2025-06-04 12:20:43] 2025-06-04 16:20:43,132 [wrapper] Test setup, not cleaning
[2025-06-04 12:20:43] 2025-06-04 16:20:43,136 [wrapper] apfmon messages muted
[2025-06-04 12:20:43] 2025-06-04 16:20:43,139 [wrapper] ==== wrapper stdout END ====
[2025-06-04 12:20:43] 2025-06-04 16:20:43,143 [wrapper] ==== wrapper stderr END ====
[2025-06-04 12:20:43]  *** Error codes and diagnostics ***
[2025-06-04 12:20:43]     "exeErrorCode": 0,
[2025-06-04 12:20:43]     "exeErrorDiag": "",
[2025-06-04 12:20:43]     "pilotErrorCode": 0,
[2025-06-04 12:20:43]     "pilotErrorDiag": "",
[2025-06-04 12:20:43]  *** Listing of results directory ***
[2025-06-04 12:20:43] total 389932
[2025-06-04 12:20:43] -rw-r--r-- 1 boincer umatlas    495897 Jun  4 10:23 pilot3.tar.gz
[2025-06-04 12:20:43] -rw-r--r-- 1 boincer umatlas      5111 Jun  4 10:35 queuedata.json
[2025-06-04 12:20:43] -rwx------ 1 boincer umatlas     37140 Jun  4 10:36 runpilot2-wrapper.sh
[2025-06-04 12:20:43] -rw-r--r-- 1 boincer umatlas       100 Jun  4 11:25 wrapper_26015_x86_64-pc-linux-gnu
[2025-06-04 12:20:43] -rwxr-xr-x 1 boincer umatlas      7986 Jun  4 11:25 run_atlas
[2025-06-04 12:20:43] -rw-r--r-- 1 boincer umatlas       105 Jun  4 11:25 job.xml
[2025-06-04 12:20:43] -rw-r--r-- 2 boincer umatlas 215481643 Jun  4 11:25 EVNT.45006593._002154.pool.root.1
[2025-06-04 12:20:43] -rw-r--r-- 2 boincer umatlas     15093 Jun  4 11:25 start_atlas.sh
[2025-06-04 12:20:43] drwxrwx--x 2 boincer umatlas      4096 Jun  4 11:25 shared
[2025-06-04 12:20:43] -rw-r--r-- 2 boincer umatlas    508881 Jun  4 11:25 input.tar.gz
[2025-06-04 12:20:43] -rw-r--r-- 1 boincer umatlas         0 Jun  4 11:25 boinc_lockfile
[2025-06-04 12:20:43] -rw-r--r-- 1 boincer umatlas      2524 Jun  4 11:25 pandaJob.out
[2025-06-04 12:20:43] -rw------- 1 boincer umatlas    990989 Jun  4 11:26 agis_schedconf.cvmfs.json
[2025-06-04 12:20:43] -rw------- 1 boincer umatlas   1598969 Jun  4 11:26 agis_ddmendpoints.agis.ALL.json
[2025-06-04 12:20:43] drwx------ 4 boincer umatlas      4096 Jun  4 11:26 pilot3
[2025-06-04 12:20:43] -rw-r--r-- 1 boincer umatlas      6355 Jun  4 12:10 init_data.xml
[2025-06-04 12:20:43] -rw------- 1 boincer umatlas        95 Jun  4 12:19 pilot_heartbeat.json
[2025-06-04 12:20:43] -rw-r--r-- 1 boincer umatlas       529 Jun  4 12:19 boinc_task_state.xml
[2025-06-04 12:20:43] -rw------- 1 boincer umatlas 178701978 Jun  4 12:19 HITS.45006595._056718.pool.root.1
[2025-06-04 12:20:43] -rw------- 1 boincer umatlas      1056 Jun  4 12:20 memory_monitor_summary.json
[2025-06-04 12:20:43] -rw------- 1 boincer umatlas    299295 Jun  4 12:20 log.45006595._056718.job.log.tgz.1
[2025-06-04 12:20:43] -rw------- 1 boincer umatlas      7748 Jun  4 12:20 heartbeat.json
[2025-06-04 12:20:43] -rw-r--r-- 1 boincer umatlas      8192 Jun  4 12:20 boinc_mmap_file
[2025-06-04 12:20:43] -rw-r--r-- 1 boincer umatlas        27 Jun  4 12:20 wrapper_checkpoint.txt
[2025-06-04 12:20:43] -rw------- 1 boincer umatlas      4611 Jun  4 12:20 pilotlog.txt
[2025-06-04 12:20:43] -rw------- 1 boincer umatlas    338835 Jun  4 12:20 log.45006595._056718.job.log.1
[2025-06-04 12:20:43] -rw------- 1 boincer umatlas       357 Jun  4 12:20 output.list
[2025-06-04 12:20:43] -rw-r--r-- 1 boincer umatlas       620 Jun  4 12:20 runtime_log
[2025-06-04 12:20:43] -rw------- 1 boincer umatlas    655360 Jun  4 12:20 result.tar.gz
[2025-06-04 12:20:43] -rw------- 1 boincer umatlas       659 Jun  4 12:20 uXQODmaP4g7nsSi4ap6QjLDmwznN0nGgGQJmUXzaDmzznKDm5U1gKn.diag
[2025-06-04 12:20:43] -rw-r--r-- 1 boincer umatlas      8669 Jun  4 12:20 runtime_log.err
[2025-06-04 12:20:43] -rw-r--r-- 1 boincer umatlas     21812 Jun  4 12:20 stderr.txt
[2025-06-04 12:20:43] HITS file was successfully produced:
[2025-06-04 12:20:43] -rw------- 1 boincer umatlas 178701978 Jun  4 12:19 shared/HITS.pool.root.1
[2025-06-04 12:20:43]  *** Contents of shared directory: ***
[2025-06-04 12:20:43] total 386108
[2025-06-04 12:20:43] -rw-r--r-- 2 boincer umatlas 215481643 Jun  4 11:25 ATLAS.root_0
[2025-06-04 12:20:43] -rw-r--r-- 2 boincer umatlas     15093 Jun  4 11:25 start_atlas.sh
[2025-06-04 12:20:43] -rw-r--r-- 2 boincer umatlas    508881 Jun  4 11:25 input.tar.gz
[2025-06-04 12:20:43] -rw------- 1 boincer umatlas 178701978 Jun  4 12:19 HITS.pool.root.1
[2025-06-04 12:20:43] -rw------- 1 boincer umatlas    655360 Jun  4 12:20 result.tar.gz
12:20:44 (78888): run_atlas exited; CPU time 26351.326944
12:20:44 (78888): called boinc_finish(0)

</stderr_txt>
]]>

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