Stderr output

<core_client_version>8.1.0</core_client_version>
<![CDATA[
<stderr_txt>
10:40:11 (2715384): wrapper (7.7.26015): starting
10:40:11 (2715384): wrapper: running run_atlas (--nthreads 8)
[2025-06-04 10:40:11] Arguments: --nthreads 8
[2025-06-04 10:40:11] Threads: 8
[2025-06-04 10:40:11] Checking for CVMFS
[2025-06-04 10:40:11] Probing /cvmfs/atlas.cern.ch... OK
[2025-06-04 10:40:11] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-06-04 10:40:11] Running cvmfs_config stat atlas.cern.ch
[2025-06-04 10:40:11] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-06-04 10:40:11] 2.12.6.0 9255 31632 583060 146783 1 66 29979842 32947200 12324 16776704 1 169867903 99.664 144578809 26929 http://cvmfs-s1fnal.opensciencegrid.org:8000/cvmfs/atlas.cern.ch http://192.41.231.237:6081 1
[2025-06-04 10:40:11] CVMFS is ok
[2025-06-04 10:40:11] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-06-04 10:40:11] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2025-06-04 10:40:11] Further information can be found at the LHC@home message board.
[2025-06-04 10:40:11] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-06-04 10:40:11] Checking for apptainer binary...
[2025-06-04 10:40:11] Using apptainer found in PATH at /usr/bin/apptainer
[2025-06-04 10:40:11] Running /usr/bin/apptainer --version
[2025-06-04 10:40:11] apptainer version 1.4.1-1.el9
[2025-06-04 10:40:11] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-06-04 10:40:11] c6-6-8-1.aglt2.org
[2025-06-04 10:40:11] apptainer works
[2025-06-04 10:40:11] Set ATHENA_PROC_NUMBER=8
[2025-06-04 10:40:11] Set ATHENA_CORE_NUMBER=8
[2025-06-04 10:40:11] Starting ATLAS job with PandaID=6666850764
[2025-06-04 10:40:11] Running command: /usr/bin/apptainer exec -B /cvmfs,/tmp/boinchome/slots/2 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-06-04 12:16:05]  *** The last 200 lines of the pilot log: ***
[2025-06-04 12:16:05]  lfn=log.44871837._064844.job.log.tgz.1
[2025-06-04 12:16:05]  mtime=0
[2025-06-04 12:16:05]  protocol_id=None
[2025-06-04 12:16:05]  protocols=[{'endpoint': 'davs://dav.ndgf.org:443', 'flavour': 'WEBDAV', 'id': 331, 'path': '/atlas/disk/atlasdatadisk/rucio/'}]
[2025-06-04 12:16:05]  replicas=None
[2025-06-04 12:16:05]  scope=mc23_13p6TeV
[2025-06-04 12:16:05]  status=None
[2025-06-04 12:16:05]  status_code=0
[2025-06-04 12:16:05]  storage_token=
[2025-06-04 12:16:05]  surl=/tmp/boinchome/slots/2/PanDA_Pilot-6666850764/log.44871837._064844.job.log.tgz.1
[2025-06-04 12:16:05]  turl=davs://dav.ndgf.org:443/atlas/disk/atlasdatadisk/rucio/mc23_13p6TeV/b3/dc/log.44871837._064844.job.log.tgz.1
[2025-06-04 12:16:05]  workdir=None
[2025-06-04 12:16:05] ]
[2025-06-04 12:16:05] 2025-06-04 16:15:37,847 | INFO     | transferring file log.44871837._064844.job.log.tgz.1 from /tmp/boinchome/slots/2/PanDA_Pilot-6666850764/log.44871837._064844.job.log.tgz.1 to /tmp/boinchome/slots/
[2025-06-04 12:16:05] 2025-06-04 16:15:37,847 | INFO     | executing command: /usr/bin/env mv /tmp/boinchome/slots/2/PanDA_Pilot-6666850764/log.44871837._064844.job.log.tgz.1 /tmp/boinchome/slots/2/log.44871837._064844.job
[2025-06-04 12:16:05] 2025-06-04 16:15:37,863 | INFO     | adding to output.list: log.44871837._064844.job.log.tgz.1 davs://dav.ndgf.org:443/atlas/disk/atlasdatadisk/rucio/mc23_13p6TeV/b3/dc/log.44871837._064844.job.log.tg
[2025-06-04 12:16:05] 2025-06-04 16:15:37,864 | INFO     | alt stage-out settings: ['pl', 'write_lan', 'w', 'default'], allow_altstageout=False, remain_files=0, has_altstorage=True
[2025-06-04 12:16:05] 2025-06-04 16:15:37,864 | INFO     | summary of transferred files:
[2025-06-04 12:16:05] 2025-06-04 16:15:37,864 | INFO     |  -- lfn=log.44871837._064844.job.log.tgz.1, status_code=0, status=transferred
[2025-06-04 12:16:05] 2025-06-04 16:15:37,865 | INFO     | stage-out finished correctly
[2025-06-04 12:16:05] 2025-06-04 16:15:39,100 | INFO     | PID=2719026 has CPU usage=12.9% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i 
[2025-06-04 12:16:05] 2025-06-04 16:15:39,100 | INFO     | .. there are 15 such processes running
[2025-06-04 12:16:05] 2025-06-04 16:15:39,437 | INFO     | monitor loop #422: job 0:6666850764 is in state 'finished'
[2025-06-04 12:16:05] 2025-06-04 16:15:39,437 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-06-04 12:16:05] 2025-06-04 16:15:40,812 | INFO     | finished stage-out for finished payload, adding job to finished_jobs queue
[2025-06-04 12:16:05] 2025-06-04 16:15:41,940 | INFO     | monitor loop #423: job 0:6666850764 is in state 'finished'
[2025-06-04 12:16:05] 2025-06-04 16:15:41,941 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-06-04 12:16:05] 2025-06-04 16:15:41,987 | INFO     | job 6666850764 has state=finished
[2025-06-04 12:16:05] 2025-06-04 16:15:41,987 | INFO     | preparing for final server update for job 6666850764 in state='finished'
[2025-06-04 12:16:05] 2025-06-04 16:15:42,047 | INFO     | sent prmon JSON dictionary to logstash server (urllib method)
[2025-06-04 12:16:05] 2025-06-04 16:15:42,048 | INFO     | this job has now completed (state=finished)
[2025-06-04 12:16:05] 2025-06-04 16:15:42,048 | INFO     | pilot will not update the server (heartbeat message will be written to file)
[2025-06-04 12:16:05] 2025-06-04 16:15:42,048 | INFO     | log transfer has been attempted: DONE
[2025-06-04 12:16:05] 2025-06-04 16:15:42,048 | INFO     | job 6666850764 has finished - writing final server update
[2025-06-04 12:16:05] 2025-06-04 16:15:42,048 | INFO     | total number of processed events: 400 (read)
[2025-06-04 12:16:05] 2025-06-04 16:15:42,067 | INFO     | executing command: lscpu
[2025-06-04 12:16:05] 2025-06-04 16:15:42,139 | INFO     | executing command: export ATLAS_LOCAL_ROOT_BASE=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase;source ${ATLAS_LOCAL_ROOT_BASE}/user/atlasLocalSetup.sh --quiet;lsetup
[2025-06-04 12:16:05] 2025-06-04 16:15:44,444 | INFO     | monitor loop #424: job 0:6666850764 is in state 'finished'
[2025-06-04 12:16:05] 2025-06-04 16:15:44,444 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-06-04 12:16:05] 2025-06-04 16:15:45,159 | INFO     | CPU arch script returned: x86-64-v4
[2025-06-04 12:16:05] 2025-06-04 16:15:45,159 | INFO     | using path: /tmp/boinchome/slots/2/PanDA_Pilot-6666850764/memory_monitor_summary.json (trf name=prmon)
[2025-06-04 12:16:05] 2025-06-04 16:15:45,160 | INFO     | extracted standard info from prmon json
[2025-06-04 12:16:05] 2025-06-04 16:15:45,160 | INFO     | extracted standard memory fields from prmon json
[2025-06-04 12:16:05] 2025-06-04 16:15:45,160 | WARNING  | GPU info not found in prmon json: 'gpu'
[2025-06-04 12:16:05] 2025-06-04 16:15:45,161 | WARNING  | format EVNTtoHITS has no such key: dbData
[2025-06-04 12:16:05] 2025-06-04 16:15:45,161 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2025-06-04 12:16:05] 2025-06-04 16:15:45,163 | INFO     | fitting pss+swap vs Time
[2025-06-04 12:16:05] 2025-06-04 16:15:45,163 | INFO     | sum of square deviations: 204163828.0
[2025-06-04 12:16:05] 2025-06-04 16:15:45,163 | INFO     | sum of deviations: -3040385546.000001
[2025-06-04 12:16:05] 2025-06-04 16:15:45,163 | INFO     | mean x: 1749050970.0
[2025-06-04 12:16:05] 2025-06-04 16:15:45,164 | INFO     | mean y: 2278481.7586206896
[2025-06-04 12:16:05] 2025-06-04 16:15:45,164 | INFO     | -- intersect: 26048955508.23601
[2025-06-04 12:16:05] 2025-06-04 16:15:45,164 | INFO     | intersect: 26048955508.23601
[2025-06-04 12:16:05] 2025-06-04 16:15:45,164 | INFO     | chi2: 1.1379337368834912
[2025-06-04 12:16:05] 2025-06-04 16:15:45,164 | INFO     | -- intersect: 26048955508.23601
[2025-06-04 12:16:05] 2025-06-04 16:15:45,164 | INFO     | current memory leak: -14.89 B/s (using 87 data points, chi2=1.14)
[2025-06-04 12:16:05] 2025-06-04 16:15:45,164 | INFO     | ..............................
[2025-06-04 12:16:05] 2025-06-04 16:15:45,165 | INFO     | . Timing measurements:
[2025-06-04 12:16:05] 2025-06-04 16:15:45,165 | INFO     | . get job = 0 s
[2025-06-04 12:16:05] 2025-06-04 16:15:45,165 | INFO     | . initial setup = 2 s
[2025-06-04 12:16:05] 2025-06-04 16:15:45,165 | INFO     | . payload setup = 4 s
[2025-06-04 12:16:05] 2025-06-04 16:15:45,165 | INFO     | . stage-in = 0 s
[2025-06-04 12:16:05] 2025-06-04 16:15:45,165 | INFO     | . payload execution = 5694 s
[2025-06-04 12:16:05] 2025-06-04 16:15:45,165 | INFO     | . stage-out = 0 s
[2025-06-04 12:16:05] 2025-06-04 16:15:45,165 | INFO     | . log creation = 0 s
[2025-06-04 12:16:05] 2025-06-04 16:15:45,165 | INFO     | ..............................
[2025-06-04 12:16:05] 2025-06-04 16:15:45,249 | INFO     | 
[2025-06-04 12:16:05] 2025-06-04 16:15:45,250 | INFO     | job summary report
[2025-06-04 12:16:05] 2025-06-04 16:15:45,250 | INFO     | --------------------------------------------------
[2025-06-04 12:16:05] 2025-06-04 16:15:45,250 | INFO     | PanDA job id: 6666850764
[2025-06-04 12:16:05] 2025-06-04 16:15:45,250 | INFO     | task id: 44871837
[2025-06-04 12:16:05] 2025-06-04 16:15:45,250 | INFO     | errors: (none)
[2025-06-04 12:16:05] 2025-06-04 16:15:45,250 | INFO     | status: LOG_TRANSFER = DONE 
[2025-06-04 12:16:05] 2025-06-04 16:15:45,250 | INFO     | pilot state: finished 
[2025-06-04 12:16:05] 2025-06-04 16:15:45,250 | INFO     | transexitcode: 0
[2025-06-04 12:16:05] 2025-06-04 16:15:45,250 | INFO     | exeerrorcode: 0
[2025-06-04 12:16:05] 2025-06-04 16:15:45,250 | INFO     | exeerrordiag: 
[2025-06-04 12:16:05] 2025-06-04 16:15:45,250 | INFO     | exitcode: 0
[2025-06-04 12:16:05] 2025-06-04 16:15:45,250 | INFO     | exitmsg: OK
[2025-06-04 12:16:05] 2025-06-04 16:15:45,250 | INFO     | cpuconsumptiontime: 39494 s
[2025-06-04 12:16:05] 2025-06-04 16:15:45,250 | INFO     | nevents: 400
[2025-06-04 12:16:05] 2025-06-04 16:15:45,251 | INFO     | neventsw: 0
[2025-06-04 12:16:05] 2025-06-04 16:15:45,251 | INFO     | pid: 2727482
[2025-06-04 12:16:05] 2025-06-04 16:15:45,251 | INFO     | pgrp: 2727482
[2025-06-04 12:16:05] 2025-06-04 16:15:45,251 | INFO     | corecount: 8
[2025-06-04 12:16:05] 2025-06-04 16:15:45,251 | INFO     | event service: False
[2025-06-04 12:16:05] 2025-06-04 16:15:45,251 | INFO     | sizes: {0: 2396513, 1: 2397369, 4: 2397575, 12: 2397603, 5703: 2424158, 5704: 2433099, 5707: 2433283, 5711: 2433453}
[2025-06-04 12:16:05] 2025-06-04 16:15:45,251 | INFO     | --------------------------------------------------
[2025-06-04 12:16:05] 2025-06-04 16:15:45,251 | INFO     | 
[2025-06-04 12:16:05] 2025-06-04 16:15:45,251 | INFO     | executing command: ls -lF /tmp/boinchome/slots/2
[2025-06-04 12:16:05] 2025-06-04 16:15:45,263 | INFO     | queue jobs had 0 job(s) [purged]
[2025-06-04 12:16:05] 2025-06-04 16:15:45,263 | INFO     | queue payloads had 0 job(s) [purged]
[2025-06-04 12:16:05] 2025-06-04 16:15:45,263 | INFO     | queue data_in had 0 job(s) [purged]
[2025-06-04 12:16:05] 2025-06-04 16:15:45,264 | INFO     | queue data_out had 0 job(s) [purged]
[2025-06-04 12:16:05] 2025-06-04 16:15:45,264 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-06-04 12:16:05] 2025-06-04 16:15:45,264 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-06-04 12:16:05] 2025-06-04 16:15:45,264 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-06-04 12:16:05] 2025-06-04 16:15:45,264 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-06-04 12:16:05] 2025-06-04 16:15:45,264 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-06-04 12:16:05] 2025-06-04 16:15:45,264 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-06-04 12:16:05] 2025-06-04 16:15:45,264 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-06-04 12:16:05] 2025-06-04 16:15:45,264 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-06-04 12:16:05] 2025-06-04 16:15:45,264 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-06-04 12:16:05] 2025-06-04 16:15:45,264 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-06-04 12:16:05] 2025-06-04 16:15:45,264 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-06-04 12:16:05] 2025-06-04 16:15:45,264 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-06-04 12:16:05] 2025-06-04 16:15:45,264 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-06-04 12:16:05] 2025-06-04 16:15:45,265 | INFO     | queue completed_jobids has 1 job(s)
[2025-06-04 12:16:05] 2025-06-04 16:15:45,265 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-06-04 12:16:05] 2025-06-04 16:15:45,265 | INFO     | queue messages had 0 job(s) [purged]
[2025-06-04 12:16:05] 2025-06-04 16:15:45,265 | INFO     | job 6666850764 has completed (purged errors)
[2025-06-04 12:16:05] 2025-06-04 16:15:45,265 | INFO     | overall cleanup function is called
[2025-06-04 12:16:05] 2025-06-04 16:15:46,273 | INFO     | --- collectZombieJob: --- 10, [2727482]
[2025-06-04 12:16:05] 2025-06-04 16:15:46,273 | INFO     | zombie collector waiting for pid 2727482
[2025-06-04 12:16:05] 2025-06-04 16:15:46,273 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-06-04 12:16:05] 2025-06-04 16:15:46,273 | INFO     | collected zombie processes
[2025-06-04 12:16:05] 2025-06-04 16:15:46,273 | INFO     | will attempt to kill all subprocesses of pid=2727482
[2025-06-04 12:16:05] 2025-06-04 16:15:46,582 | INFO     | process IDs to be killed: [2727482] (in reverse order)
[2025-06-04 12:16:05] 2025-06-04 16:15:46,668 | WARNING  | found no corresponding commands to process id(s)
[2025-06-04 12:16:05] 2025-06-04 16:15:46,668 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-06-04 12:16:05] 2025-06-04 16:15:46,680 | INFO     | did not find any defunct processes belonging to 2727482
[2025-06-04 12:16:05] 2025-06-04 16:15:46,691 | INFO     | did not find any defunct processes belonging to 2727482
[2025-06-04 12:16:05] 2025-06-04 16:15:46,691 | INFO     | ready for new job
[2025-06-04 12:16:05] 2025-06-04 16:15:46,691 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-06-04 12:16:05] 2025-06-04 16:15:46,693 | INFO     | **************************************
[2025-06-04 12:16:05] 2025-06-04 16:15:46,693 | INFO     | ***  PanDA Pilot version 3.10.2.2  ***
[2025-06-04 12:16:05] 2025-06-04 16:15:46,693 | INFO     | **************************************
[2025-06-04 12:16:05] 2025-06-04 16:15:46,693 | INFO     | 
[2025-06-04 12:16:05] 2025-06-04 16:15:46,709 | INFO     | architecture information:
[2025-06-04 12:16:05] 2025-06-04 16:15:46,710 | INFO     | executing command: cat /etc/os-release
[2025-06-04 12:16:05] 2025-06-04 16:15:46,723 | INFO     | cat /etc/os-release:
[2025-06-04 12:16:05] NAME="CentOS Linux"
[2025-06-04 12:16:05] VERSION="7 (Core)"
[2025-06-04 12:16:05] ID="centos"
[2025-06-04 12:16:05] ID_LIKE="rhel fedora"
[2025-06-04 12:16:05] VERSION_ID="7"
[2025-06-04 12:16:05] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-06-04 12:16:05] ANSI_COLOR="0;31"
[2025-06-04 12:16:05] CPE_NAME="cpe:/o:centos:centos:7"
[2025-06-04 12:16:05] HOME_URL="https://www.centos.org/"
[2025-06-04 12:16:05] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-06-04 12:16:05] 
[2025-06-04 12:16:05] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-06-04 12:16:05] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-06-04 12:16:05] REDHAT_SUPPORT_PRODUCT="centos"
[2025-06-04 12:16:05] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-06-04 12:16:05] 
[2025-06-04 12:16:05] 2025-06-04 16:15:46,723 | INFO     | **************************************
[2025-06-04 12:16:05] 2025-06-04 16:15:47,226 | INFO     | executing command: df -mP /tmp/boinchome/slots/2
[2025-06-04 12:16:05] 2025-06-04 16:15:47,242 | INFO     | sufficient remaining disk space (75571920896 B)
[2025-06-04 12:16:05] 2025-06-04 16:15:47,243 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-06-04 12:16:05] 2025-06-04 16:15:47,243 | INFO     | current server update state: UPDATING_FINAL
[2025-06-04 12:16:05] 2025-06-04 16:15:47,243 | INFO     | update_server=False
[2025-06-04 12:16:05] 2025-06-04 16:15:47,243 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-06-04 12:16:05] 2025-06-04 16:15:47,243 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-06-04 12:16:05] 2025-06-04 16:15:47,243 | WARNING  | aborting monitor loop since graceful_stop has been set (timing out remaining threads)
[2025-06-04 12:16:05] 2025-06-04 16:15:47,243 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-06-04 12:16:05] 2025-06-04 16:15:47,244 | INFO     | found 0 job(s) in 20 queues
[2025-06-04 12:16:05] 2025-06-04 16:15:47,244 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-06-04 12:16:05] 2025-06-04 16:15:47,244 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-06-04 12:16:05] 2025-06-04 16:15:47,590 | INFO     | all job control threads have been joined
[2025-06-04 12:16:05] 2025-06-04 16:15:47,691 | INFO     | all data control threads have been joined
[2025-06-04 12:16:05] 2025-06-04 16:15:47,952 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-06-04 12:16:05] 2025-06-04 16:15:47,952 | INFO     | aborting loop
[2025-06-04 12:16:05] 2025-06-04 16:15:48,244 | INFO     | [job] retrieve thread has finished
[2025-06-04 12:16:05] 2025-06-04 16:15:48,249 | INFO     | [job] queue monitor thread has finished
[2025-06-04 12:16:05] 2025-06-04 16:15:48,464 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-06-04 12:16:05] 2025-06-04 16:15:48,571 | INFO     | all payload control threads have been joined
[2025-06-04 12:16:05] 2025-06-04 16:15:48,595 | INFO     | [job] control thread has finished
[2025-06-04 12:16:05] 2025-06-04 16:15:48,697 | INFO     | [data] control thread has finished
[2025-06-04 12:16:05] 2025-06-04 16:15:48,743 | INFO     | [payload] validate_post thread has finished
[2025-06-04 12:16:05] 2025-06-04 16:15:48,954 | INFO     | [job] validate thread has finished
[2025-06-04 12:16:05] 2025-06-04 16:15:48,958 | INFO     | [job] job monitor thread has finished
[2025-06-04 12:16:05] 2025-06-04 16:15:49,102 | INFO     | [job] create_data_payload thread has finished
[2025-06-04 12:16:05] 2025-06-04 16:15:49,112 | INFO     | [data] copytool_in thread has finished
[2025-06-04 12:16:05] 2025-06-04 16:15:49,249 | INFO     | [payload] validate_pre thread has finished
[2025-06-04 12:16:05] 2025-06-04 16:15:49,462 | INFO     | [payload] execute_payloads thread has finished
[2025-06-04 12:16:05] 2025-06-04 16:15:49,576 | INFO     | [payload] control thread has finished
[2025-06-04 12:16:05] 2025-06-04 16:15:49,749 | INFO     | [payload] failed_post thread has finished
[2025-06-04 12:16:05] 2025-06-04 16:15:50,470 | INFO     | [data] copytool_out thread has finished
[2025-06-04 12:16:05] 2025-06-04 16:15:51,250 | INFO     | [data] queue_monitor thread has finished
[2025-06-04 12:16:05] 2025-06-04 16:15:57,552 | INFO     | job.realtimelogging is not enabled
[2025-06-04 12:16:05] 2025-06-04 16:15:58,556 | INFO     | [payload] run_realtimelog thread has finished
[2025-06-04 12:16:05] 2025-06-04 16:15:59,731 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 139861085804352)>', '<ExcThread(monitor, started 139860291606272)>']
[2025-06-04 12:16:05] 2025-06-04 16:16:00,310 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-06-04 12:16:05] 2025-06-04 16:16:00,310 | INFO     | [monitor] control thread has ended
[2025-06-04 12:16:05] 2025-06-04 16:16:04,756 | INFO     | all workflow threads have been joined
[2025-06-04 12:16:05] 2025-06-04 16:16:04,757 | INFO     | end of generic workflow (traces error code: 0)
[2025-06-04 12:16:05] 2025-06-04 16:16:04,757 | INFO     | traces error code: 0
[2025-06-04 12:16:05] 2025-06-04 16:16:04,757 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-06-04 12:16:05] 2025-06-04 16:16:04,880 [wrapper] ==== pilot stdout END ====
[2025-06-04 12:16:05] 2025-06-04 16:16:04,882 [wrapper] ==== wrapper stdout RESUME ====
[2025-06-04 12:16:05] 2025-06-04 16:16:04,884 [wrapper] pilotpid: 2719026
[2025-06-04 12:16:05] 2025-06-04 16:16:04,885 [wrapper] Pilot exit status: 0
[2025-06-04 12:16:05] 2025-06-04 16:16:04,895 [wrapper] pandaids: 6666850764
[2025-06-04 12:16:05] 2025-06-04 16:16:04,955 [wrapper] cleanup supervisor_pilot 3022087 2719027
[2025-06-04 12:16:05] 2025-06-04 16:16:04,957 [wrapper] Test setup, not cleaning
[2025-06-04 12:16:05] 2025-06-04 16:16:04,959 [wrapper] apfmon messages muted
[2025-06-04 12:16:05] 2025-06-04 16:16:04,961 [wrapper] ==== wrapper stdout END ====
[2025-06-04 12:16:05] 2025-06-04 16:16:04,963 [wrapper] ==== wrapper stderr END ====
[2025-06-04 12:16:05]  *** Error codes and diagnostics ***
[2025-06-04 12:16:05]     "exeErrorCode": 0,
[2025-06-04 12:16:05]     "exeErrorDiag": "",
[2025-06-04 12:16:05]     "pilotErrorCode": 0,
[2025-06-04 12:16:05]     "pilotErrorDiag": "",
[2025-06-04 12:16:05]  *** Listing of results directory ***
[2025-06-04 12:16:05] total 420180
[2025-06-04 12:16:05] -rw-r--r-- 1 boincer umatlas    495897 May 27 04:13 pilot3.tar.gz
[2025-06-04 12:16:05] -rw-r--r-- 1 boincer umatlas      5111 May 27 04:48 queuedata.json
[2025-06-04 12:16:05] -rwx------ 1 boincer umatlas     37140 May 27 04:52 runpilot2-wrapper.sh
[2025-06-04 12:16:05] -rw-r--r-- 1 boincer umatlas       100 Jun  4 10:40 wrapper_26015_x86_64-pc-linux-gnu
[2025-06-04 12:16:05] -rwxr-xr-x 1 boincer umatlas      7986 Jun  4 10:40 run_atlas
[2025-06-04 12:16:05] -rw-r--r-- 1 boincer umatlas       105 Jun  4 10:40 job.xml
[2025-06-04 12:16:05] -rw-r--r-- 2 boincer umatlas 226150279 Jun  4 10:40 EVNT.44871834._002555.pool.root.1
[2025-06-04 12:16:05] -rw-r--r-- 2 boincer umatlas     15093 Jun  4 10:40 start_atlas.sh
[2025-06-04 12:16:05] drwxrwx--x 2 boincer umatlas      4096 Jun  4 10:40 shared
[2025-06-04 12:16:05] -rw-r--r-- 2 boincer umatlas    508876 Jun  4 10:40 input.tar.gz
[2025-06-04 12:16:05] -rw-r--r-- 1 boincer umatlas         0 Jun  4 10:40 boinc_lockfile
[2025-06-04 12:16:05] -rw-r--r-- 1 boincer umatlas      2558 Jun  4 10:40 pandaJob.out
[2025-06-04 12:16:05] -rw------- 1 boincer umatlas    987207 Jun  4 10:40 agis_schedconf.cvmfs.json
[2025-06-04 12:16:05] -rw------- 1 boincer umatlas   1598969 Jun  4 10:40 agis_ddmendpoints.agis.ALL.json
[2025-06-04 12:16:05] drwx------ 4 boincer umatlas      4096 Jun  4 10:40 pilot3
[2025-06-04 12:16:05] -rw-r--r-- 1 boincer umatlas      6856 Jun  4 12:09 init_data.xml
[2025-06-04 12:16:05] -rw------- 1 boincer umatlas 198510607 Jun  4 12:15 HITS.44871837._064844.pool.root.1
[2025-06-04 12:16:05] -rw-r--r-- 1 boincer umatlas       529 Jun  4 12:15 boinc_task_state.xml
[2025-06-04 12:16:05] -rw------- 1 boincer umatlas        95 Jun  4 12:15 pilot_heartbeat.json
[2025-06-04 12:16:05] -rw------- 1 boincer umatlas      1039 Jun  4 12:15 memory_monitor_summary.json
[2025-06-04 12:16:05] -rw------- 1 boincer umatlas    332703 Jun  4 12:15 log.44871837._064844.job.log.tgz.1
[2025-06-04 12:16:05] -rw-r--r-- 1 boincer umatlas      8192 Jun  4 12:15 boinc_mmap_file
[2025-06-04 12:16:05] -rw-r--r-- 1 boincer umatlas        27 Jun  4 12:15 wrapper_checkpoint.txt
[2025-06-04 12:16:05] -rw------- 1 boincer umatlas      7718 Jun  4 12:15 heartbeat.json
[2025-06-04 12:16:05] -rw------- 1 boincer umatlas      4548 Jun  4 12:16 pilotlog.txt
[2025-06-04 12:16:05] -rw------- 1 boincer umatlas    549339 Jun  4 12:16 log.44871837._064844.job.log.1
[2025-06-04 12:16:05] -rw------- 1 boincer umatlas       357 Jun  4 12:16 output.list
[2025-06-04 12:16:05] -rw-r--r-- 1 boincer umatlas       620 Jun  4 12:16 runtime_log
[2025-06-04 12:16:05] -rw------- 1 boincer umatlas    901120 Jun  4 12:16 result.tar.gz
[2025-06-04 12:16:05] -rw-r--r-- 1 boincer umatlas      8659 Jun  4 12:16 runtime_log.err
[2025-06-04 12:16:05] -rw------- 1 boincer umatlas       652 Jun  4 12:16 dc9MDmBE5d7n9Rq4apOajLDm4fhM0noT9bVof3QYDmxaRKDmONE9Po.diag
[2025-06-04 12:16:05] -rw-r--r-- 1 boincer umatlas     21664 Jun  4 12:16 stderr.txt
[2025-06-04 12:16:05] HITS file was successfully produced:
[2025-06-04 12:16:05] -rw------- 1 boincer umatlas 198510607 Jun  4 12:15 shared/HITS.pool.root.1
[2025-06-04 12:16:05]  *** Contents of shared directory: ***
[2025-06-04 12:16:05] total 416116
[2025-06-04 12:16:05] -rw-r--r-- 2 boincer umatlas 226150279 Jun  4 10:40 ATLAS.root_0
[2025-06-04 12:16:05] -rw-r--r-- 2 boincer umatlas     15093 Jun  4 10:40 start_atlas.sh
[2025-06-04 12:16:05] -rw-r--r-- 2 boincer umatlas    508876 Jun  4 10:40 input.tar.gz
[2025-06-04 12:16:05] -rw------- 1 boincer umatlas 198510607 Jun  4 12:15 HITS.pool.root.1
[2025-06-04 12:16:05] -rw------- 1 boincer umatlas    901120 Jun  4 12:16 result.tar.gz
12:16:06 (2715384): run_atlas exited; CPU time 39717.234204
12:16:06 (2715384): called boinc_finish(0)

</stderr_txt>
]]>

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