Stderr output

<core_client_version>8.1.0</core_client_version>
<![CDATA[
<stderr_txt>
11:17:42 (1429378): wrapper (7.7.26015): starting
11:17:42 (1429378): wrapper: running run_atlas (--nthreads 12)
[2025-06-04 11:17:42] Arguments: --nthreads 12
[2025-06-04 11:17:42] Threads: 12
[2025-06-04 11:17:42] Checking for CVMFS
[2025-06-04 11:17:42] Probing /cvmfs/atlas.cern.ch... OK
[2025-06-04 11:17:42] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-06-04 11:17:42] Running cvmfs_config stat atlas.cern.ch
[2025-06-04 11:17:42] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-06-04 11:17:42] 2.12.6.0 3367424 23457 474924 146783 0 562 20092459 32935937 6613 16776704 0 87775938 99.611 89230140 32551 http://cvmfs-s1fnal.opensciencegrid.org:8000/cvmfs/atlas.cern.ch http://192.41.231.237:6081 1
[2025-06-04 11:17:42] CVMFS is ok
[2025-06-04 11:17:42] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-06-04 11:17:42] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2025-06-04 11:17:42] Further information can be found at the LHC@home message board.
[2025-06-04 11:17:42] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-06-04 11:17:42] Checking for apptainer binary...
[2025-06-04 11:17:42] Using apptainer found in PATH at /usr/bin/apptainer
[2025-06-04 11:17:42] Running /usr/bin/apptainer --version
[2025-06-04 11:17:42] apptainer version 1.4.1-1.el9
[2025-06-04 11:17:42] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-06-04 11:17:43] c6-2-29-4.aglt2.org
[2025-06-04 11:17:43] apptainer works
[2025-06-04 11:17:43] Set ATHENA_PROC_NUMBER=12
[2025-06-04 11:17:43] Set ATHENA_CORE_NUMBER=12
[2025-06-04 11:17:43] Starting ATLAS job with PandaID=6667435839
[2025-06-04 11:17:43] Running command: /usr/bin/apptainer exec -B /cvmfs,/tmp/boinchome/slots/0 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-06-04 12:18:25]  *** The last 200 lines of the pilot log: ***
[2025-06-04 12:18:25]  is_altstaged=None
[2025-06-04 12:18:25]  is_tar=False
[2025-06-04 12:18:25]  lfn=log.44871837._072498.job.log.tgz.1
[2025-06-04 12:18:25]  mtime=0
[2025-06-04 12:18:25]  protocol_id=None
[2025-06-04 12:18:25]  protocols=[{'endpoint': 'davs://dav.ndgf.org:443', 'flavour': 'WEBDAV', 'id': 331, 'path': '/atlas/disk/atlasdatadisk/rucio/'}]
[2025-06-04 12:18:25]  replicas=None
[2025-06-04 12:18:25]  scope=mc23_13p6TeV
[2025-06-04 12:18:25]  status=None
[2025-06-04 12:18:25]  status_code=0
[2025-06-04 12:18:25]  storage_token=
[2025-06-04 12:18:25]  surl=/tmp/boinchome/slots/0/PanDA_Pilot-6667435839/log.44871837._072498.job.log.tgz.1
[2025-06-04 12:18:25]  turl=davs://dav.ndgf.org:443/atlas/disk/atlasdatadisk/rucio/mc23_13p6TeV/5b/bb/log.44871837._072498.job.log.tgz.1
[2025-06-04 12:18:25]  workdir=None
[2025-06-04 12:18:25] ]
[2025-06-04 12:18:25] 2025-06-04 16:18:08,928 | INFO     | transferring file log.44871837._072498.job.log.tgz.1 from /tmp/boinchome/slots/0/PanDA_Pilot-6667435839/log.44871837._072498.job.log.tgz.1 to /tmp/boinchome/slots/
[2025-06-04 12:18:25] 2025-06-04 16:18:08,928 | INFO     | executing command: /usr/bin/env mv /tmp/boinchome/slots/0/PanDA_Pilot-6667435839/log.44871837._072498.job.log.tgz.1 /tmp/boinchome/slots/0/log.44871837._072498.job
[2025-06-04 12:18:25] 2025-06-04 16:18:08,944 | INFO     | adding to output.list: log.44871837._072498.job.log.tgz.1 davs://dav.ndgf.org:443/atlas/disk/atlasdatadisk/rucio/mc23_13p6TeV/5b/bb/log.44871837._072498.job.log.tg
[2025-06-04 12:18:25] 2025-06-04 16:18:08,945 | INFO     | alt stage-out settings: ['pl', 'write_lan', 'w', 'default'], allow_altstageout=False, remain_files=0, has_altstorage=True
[2025-06-04 12:18:25] 2025-06-04 16:18:08,945 | INFO     | summary of transferred files:
[2025-06-04 12:18:25] 2025-06-04 16:18:08,945 | INFO     |  -- lfn=log.44871837._072498.job.log.tgz.1, status_code=0, status=transferred
[2025-06-04 12:18:25] 2025-06-04 16:18:08,946 | INFO     | stage-out finished correctly
[2025-06-04 12:18:25] 2025-06-04 16:18:09,219 | INFO     | finished stage-out for finished payload, adding job to finished_jobs queue
[2025-06-04 12:18:25] 2025-06-04 16:18:09,988 | INFO     | monitor loop #274: job 0:6667435839 is in state 'finished'
[2025-06-04 12:18:25] 2025-06-04 16:18:09,988 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-06-04 12:18:25] 2025-06-04 16:18:10,385 | INFO     | job 6667435839 has state=finished
[2025-06-04 12:18:25] 2025-06-04 16:18:10,385 | INFO     | preparing for final server update for job 6667435839 in state='finished'
[2025-06-04 12:18:25] 2025-06-04 16:18:10,386 | INFO     | this job has now completed (state=finished)
[2025-06-04 12:18:25] 2025-06-04 16:18:10,386 | INFO     | pilot will not update the server (heartbeat message will be written to file)
[2025-06-04 12:18:25] 2025-06-04 16:18:10,386 | INFO     | log transfer has been attempted: DONE
[2025-06-04 12:18:25] 2025-06-04 16:18:10,386 | INFO     | job 6667435839 has finished - writing final server update
[2025-06-04 12:18:25] 2025-06-04 16:18:10,387 | INFO     | total number of processed events: 400 (read)
[2025-06-04 12:18:25] 2025-06-04 16:18:10,403 | INFO     | executing command: lscpu
[2025-06-04 12:18:25] 2025-06-04 16:18:10,468 | INFO     | executing command: export ATLAS_LOCAL_ROOT_BASE=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase;source ${ATLAS_LOCAL_ROOT_BASE}/user/atlasLocalSetup.sh --quiet;lsetup
[2025-06-04 12:18:25] 2025-06-04 16:18:12,491 | INFO     | monitor loop #275: job 0:6667435839 is in state 'finished'
[2025-06-04 12:18:25] 2025-06-04 16:18:12,492 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-06-04 12:18:25] 2025-06-04 16:18:12,954 | INFO     | PID=1433336 has CPU usage=5.9% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i P
[2025-06-04 12:18:25] 2025-06-04 16:18:12,955 | INFO     | .. there are 8 such processes running
[2025-06-04 12:18:25] 2025-06-04 16:18:13,123 | INFO     | CPU arch script returned: x86-64-v4
[2025-06-04 12:18:25] 2025-06-04 16:18:13,123 | INFO     | using path: /tmp/boinchome/slots/0/PanDA_Pilot-6667435839/memory_monitor_summary.json (trf name=prmon)
[2025-06-04 12:18:25] 2025-06-04 16:18:13,124 | INFO     | extracted standard info from prmon json
[2025-06-04 12:18:25] 2025-06-04 16:18:13,124 | INFO     | extracted standard memory fields from prmon json
[2025-06-04 12:18:25] 2025-06-04 16:18:13,124 | WARNING  | GPU info not found in prmon json: 'gpu'
[2025-06-04 12:18:25] 2025-06-04 16:18:13,124 | WARNING  | format EVNTtoHITS has no such key: dbData
[2025-06-04 12:18:25] 2025-06-04 16:18:13,125 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2025-06-04 12:18:25] 2025-06-04 16:18:13,126 | INFO     | fitting pss+swap vs Time
[2025-06-04 12:18:25] 2025-06-04 16:18:13,126 | INFO     | sum of square deviations: 43584073.0
[2025-06-04 12:18:25] 2025-06-04 16:18:13,126 | INFO     | sum of deviations: -2932212782.0
[2025-06-04 12:18:25] 2025-06-04 16:18:13,127 | INFO     | mean x: 1749052155.5
[2025-06-04 12:18:25] 2025-06-04 16:18:13,127 | INFO     | mean y: 2779456.1923076925
[2025-06-04 12:18:25] 2025-06-04 16:18:13,127 | INFO     | -- intersect: 117674046360.0852
[2025-06-04 12:18:25] 2025-06-04 16:18:13,127 | INFO     | intersect: 117674046360.0852
[2025-06-04 12:18:25] 2025-06-04 16:18:13,127 | INFO     | chi2: 0.11385773826037388
[2025-06-04 12:18:25] 2025-06-04 16:18:13,127 | INFO     | -- intersect: 117674046360.0852
[2025-06-04 12:18:25] 2025-06-04 16:18:13,127 | INFO     | current memory leak: -67.28 B/s (using 52 data points, chi2=0.11)
[2025-06-04 12:18:25] 2025-06-04 16:18:13,127 | INFO     | ..............................
[2025-06-04 12:18:25] 2025-06-04 16:18:13,128 | INFO     | . Timing measurements:
[2025-06-04 12:18:25] 2025-06-04 16:18:13,128 | INFO     | . get job = 0 s
[2025-06-04 12:18:25] 2025-06-04 16:18:13,128 | INFO     | . initial setup = 2 s
[2025-06-04 12:18:25] 2025-06-04 16:18:13,128 | INFO     | . payload setup = 5 s
[2025-06-04 12:18:25] 2025-06-04 16:18:13,128 | INFO     | . stage-in = 0 s
[2025-06-04 12:18:25] 2025-06-04 16:18:13,128 | INFO     | . payload execution = 3592 s
[2025-06-04 12:18:25] 2025-06-04 16:18:13,128 | INFO     | . stage-out = 0 s
[2025-06-04 12:18:25] 2025-06-04 16:18:13,128 | INFO     | . log creation = 0 s
[2025-06-04 12:18:25] 2025-06-04 16:18:13,128 | INFO     | ..............................
[2025-06-04 12:18:25] 2025-06-04 16:18:13,220 | INFO     | 
[2025-06-04 12:18:25] 2025-06-04 16:18:13,220 | INFO     | job summary report
[2025-06-04 12:18:25] 2025-06-04 16:18:13,220 | INFO     | --------------------------------------------------
[2025-06-04 12:18:25] 2025-06-04 16:18:13,220 | INFO     | PanDA job id: 6667435839
[2025-06-04 12:18:25] 2025-06-04 16:18:13,220 | INFO     | task id: 44871837
[2025-06-04 12:18:25] 2025-06-04 16:18:13,220 | INFO     | errors: (none)
[2025-06-04 12:18:25] 2025-06-04 16:18:13,220 | INFO     | status: LOG_TRANSFER = DONE 
[2025-06-04 12:18:25] 2025-06-04 16:18:13,220 | INFO     | pilot state: finished 
[2025-06-04 12:18:25] 2025-06-04 16:18:13,220 | INFO     | transexitcode: 0
[2025-06-04 12:18:25] 2025-06-04 16:18:13,220 | INFO     | exeerrorcode: 0
[2025-06-04 12:18:25] 2025-06-04 16:18:13,220 | INFO     | exeerrordiag: 
[2025-06-04 12:18:25] 2025-06-04 16:18:13,220 | INFO     | exitcode: 0
[2025-06-04 12:18:25] 2025-06-04 16:18:13,220 | INFO     | exitmsg: OK
[2025-06-04 12:18:25] 2025-06-04 16:18:13,220 | INFO     | cpuconsumptiontime: 38246 s
[2025-06-04 12:18:25] 2025-06-04 16:18:13,220 | INFO     | nevents: 400
[2025-06-04 12:18:25] 2025-06-04 16:18:13,221 | INFO     | neventsw: 0
[2025-06-04 12:18:25] 2025-06-04 16:18:13,221 | INFO     | pid: 1440804
[2025-06-04 12:18:25] 2025-06-04 16:18:13,221 | INFO     | pgrp: 1440804
[2025-06-04 12:18:25] 2025-06-04 16:18:13,221 | INFO     | corecount: 12
[2025-06-04 12:18:25] 2025-06-04 16:18:13,221 | INFO     | event service: False
[2025-06-04 12:18:25] 2025-06-04 16:18:13,221 | INFO     | sizes: {0: 2397392, 3: 2397598, 11: 2397626, 3601: 2423312, 3602: 2423311, 3603: 2432492, 3607: 2432606}
[2025-06-04 12:18:25] 2025-06-04 16:18:13,221 | INFO     | --------------------------------------------------
[2025-06-04 12:18:25] 2025-06-04 16:18:13,221 | INFO     | 
[2025-06-04 12:18:25] 2025-06-04 16:18:13,221 | INFO     | executing command: ls -lF /tmp/boinchome/slots/0
[2025-06-04 12:18:25] 2025-06-04 16:18:13,232 | INFO     | queue jobs had 0 job(s) [purged]
[2025-06-04 12:18:25] 2025-06-04 16:18:13,233 | INFO     | queue payloads had 0 job(s) [purged]
[2025-06-04 12:18:25] 2025-06-04 16:18:13,233 | INFO     | queue data_in had 0 job(s) [purged]
[2025-06-04 12:18:25] 2025-06-04 16:18:13,233 | INFO     | queue data_out had 0 job(s) [purged]
[2025-06-04 12:18:25] 2025-06-04 16:18:13,233 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-06-04 12:18:25] 2025-06-04 16:18:13,233 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-06-04 12:18:25] 2025-06-04 16:18:13,233 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-06-04 12:18:25] 2025-06-04 16:18:13,233 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-06-04 12:18:25] 2025-06-04 16:18:13,233 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-06-04 12:18:25] 2025-06-04 16:18:13,233 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-06-04 12:18:25] 2025-06-04 16:18:13,233 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-06-04 12:18:25] 2025-06-04 16:18:13,233 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-06-04 12:18:25] 2025-06-04 16:18:13,233 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-06-04 12:18:25] 2025-06-04 16:18:13,233 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-06-04 12:18:25] 2025-06-04 16:18:13,233 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-06-04 12:18:25] 2025-06-04 16:18:13,233 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-06-04 12:18:25] 2025-06-04 16:18:13,233 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-06-04 12:18:25] 2025-06-04 16:18:13,233 | INFO     | queue completed_jobids has 1 job(s)
[2025-06-04 12:18:25] 2025-06-04 16:18:13,233 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-06-04 12:18:25] 2025-06-04 16:18:13,234 | INFO     | queue messages had 0 job(s) [purged]
[2025-06-04 12:18:25] 2025-06-04 16:18:13,234 | INFO     | job 6667435839 has completed (purged errors)
[2025-06-04 12:18:25] 2025-06-04 16:18:13,234 | INFO     | overall cleanup function is called
[2025-06-04 12:18:25] 2025-06-04 16:18:14,241 | INFO     | --- collectZombieJob: --- 10, [1440804]
[2025-06-04 12:18:25] 2025-06-04 16:18:14,241 | INFO     | zombie collector waiting for pid 1440804
[2025-06-04 12:18:25] 2025-06-04 16:18:14,241 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-06-04 12:18:25] 2025-06-04 16:18:14,241 | INFO     | collected zombie processes
[2025-06-04 12:18:25] 2025-06-04 16:18:14,241 | INFO     | will attempt to kill all subprocesses of pid=1440804
[2025-06-04 12:18:25] 2025-06-04 16:18:14,377 | INFO     | process IDs to be killed: [1440804] (in reverse order)
[2025-06-04 12:18:25] 2025-06-04 16:18:14,432 | WARNING  | found no corresponding commands to process id(s)
[2025-06-04 12:18:25] 2025-06-04 16:18:14,433 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-06-04 12:18:25] 2025-06-04 16:18:14,439 | INFO     | did not find any defunct processes belonging to 1440804
[2025-06-04 12:18:25] 2025-06-04 16:18:14,445 | INFO     | did not find any defunct processes belonging to 1440804
[2025-06-04 12:18:25] 2025-06-04 16:18:14,445 | INFO     | ready for new job
[2025-06-04 12:18:25] 2025-06-04 16:18:14,445 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-06-04 12:18:25] 2025-06-04 16:18:14,446 | INFO     | **************************************
[2025-06-04 12:18:25] 2025-06-04 16:18:14,446 | INFO     | ***  PanDA Pilot version 3.10.2.2  ***
[2025-06-04 12:18:25] 2025-06-04 16:18:14,446 | INFO     | **************************************
[2025-06-04 12:18:25] 2025-06-04 16:18:14,446 | INFO     | 
[2025-06-04 12:18:25] 2025-06-04 16:18:14,460 | INFO     | architecture information:
[2025-06-04 12:18:25] 2025-06-04 16:18:14,460 | INFO     | executing command: cat /etc/os-release
[2025-06-04 12:18:25] 2025-06-04 16:18:14,470 | INFO     | cat /etc/os-release:
[2025-06-04 12:18:25] NAME="CentOS Linux"
[2025-06-04 12:18:25] VERSION="7 (Core)"
[2025-06-04 12:18:25] ID="centos"
[2025-06-04 12:18:25] ID_LIKE="rhel fedora"
[2025-06-04 12:18:25] VERSION_ID="7"
[2025-06-04 12:18:25] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-06-04 12:18:25] ANSI_COLOR="0;31"
[2025-06-04 12:18:25] CPE_NAME="cpe:/o:centos:centos:7"
[2025-06-04 12:18:25] HOME_URL="https://www.centos.org/"
[2025-06-04 12:18:25] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-06-04 12:18:25] 
[2025-06-04 12:18:25] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-06-04 12:18:25] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-06-04 12:18:25] REDHAT_SUPPORT_PRODUCT="centos"
[2025-06-04 12:18:25] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-06-04 12:18:25] 
[2025-06-04 12:18:25] 2025-06-04 16:18:14,471 | INFO     | **************************************
[2025-06-04 12:18:25] 2025-06-04 16:18:14,973 | INFO     | executing command: df -mP /tmp/boinchome/slots/0
[2025-06-04 12:18:25] 2025-06-04 16:18:14,986 | INFO     | sufficient remaining disk space (76546048000 B)
[2025-06-04 12:18:25] 2025-06-04 16:18:14,986 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-06-04 12:18:25] 2025-06-04 16:18:14,986 | INFO     | current server update state: UPDATING_FINAL
[2025-06-04 12:18:25] 2025-06-04 16:18:14,986 | INFO     | update_server=False
[2025-06-04 12:18:25] 2025-06-04 16:18:14,986 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-06-04 12:18:25] 2025-06-04 16:18:14,987 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-06-04 12:18:25] 2025-06-04 16:18:14,987 | WARNING  | aborting monitor loop since graceful_stop has been set (timing out remaining threads)
[2025-06-04 12:18:25] 2025-06-04 16:18:14,987 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-06-04 12:18:25] 2025-06-04 16:18:14,988 | INFO     | found 0 job(s) in 20 queues
[2025-06-04 12:18:25] 2025-06-04 16:18:14,988 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-06-04 12:18:25] 2025-06-04 16:18:14,988 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-06-04 12:18:25] 2025-06-04 16:18:14,995 | WARNING  | job monitor detected an abort_job request (signal=args.signal)
[2025-06-04 12:18:25] 2025-06-04 16:18:14,995 | WARNING  | cannot recover job monitoring - aborting pilot
[2025-06-04 12:18:25] 2025-06-04 16:18:14,995 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-06-04 12:18:25] 2025-06-04 16:18:14,995 | INFO     | will abort loop
[2025-06-04 12:18:25] 2025-06-04 16:18:15,268 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-06-04 12:18:25] 2025-06-04 16:18:15,568 | INFO     | all job control threads have been joined
[2025-06-04 12:18:25] 2025-06-04 16:18:15,901 | INFO     | all data control threads have been joined
[2025-06-04 12:18:25] 2025-06-04 16:18:15,989 | INFO     | [job] queue monitor thread has finished
[2025-06-04 12:18:25] 2025-06-04 16:18:15,992 | INFO     | [job] retrieve thread has finished
[2025-06-04 12:18:25] 2025-06-04 16:18:16,000 | INFO     | [job] job monitor thread has finished
[2025-06-04 12:18:25] 2025-06-04 16:18:16,005 | INFO     | all payload control threads have been joined
[2025-06-04 12:18:25] 2025-06-04 16:18:16,419 | INFO     | [payload] failed_post thread has finished
[2025-06-04 12:18:25] 2025-06-04 16:18:16,431 | INFO     | [job] validate thread has finished
[2025-06-04 12:18:25] 2025-06-04 16:18:16,439 | INFO     | [payload] run_realtimelog thread has finished
[2025-06-04 12:18:25] 2025-06-04 16:18:16,573 | INFO     | [job] control thread has finished
[2025-06-04 12:18:25] 2025-06-04 16:18:16,677 | INFO     | [job] create_data_payload thread has finished
[2025-06-04 12:18:25] 2025-06-04 16:18:16,690 | INFO     | [payload] validate_post thread has finished
[2025-06-04 12:18:25] 2025-06-04 16:18:16,874 | INFO     | [payload] validate_pre thread has finished
[2025-06-04 12:18:25] 2025-06-04 16:18:16,906 | INFO     | [data] control thread has finished
[2025-06-04 12:18:25] 2025-06-04 16:18:16,985 | INFO     | [data] copytool_in thread has finished
[2025-06-04 12:18:25] 2025-06-04 16:18:16,993 | INFO     | [data] copytool_out thread has finished
[2025-06-04 12:18:25] 2025-06-04 16:18:17,010 | INFO     | [payload] control thread has finished
[2025-06-04 12:18:25] 2025-06-04 16:18:17,364 | INFO     | [payload] execute_payloads thread has finished
[2025-06-04 12:18:25] 2025-06-04 16:18:19,274 | INFO     | [data] queue_monitor thread has finished
[2025-06-04 12:18:25] 2025-06-04 16:18:20,652 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 139697654982464)>', '<ExcThread(monitor, started 139697015740160)>']
[2025-06-04 12:18:25] 2025-06-04 16:18:21,011 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-06-04 12:18:25] 2025-06-04 16:18:21,011 | INFO     | [monitor] control thread has ended
[2025-06-04 12:18:25] 2025-06-04 16:18:25,677 | INFO     | all workflow threads have been joined
[2025-06-04 12:18:25] 2025-06-04 16:18:25,677 | INFO     | end of generic workflow (traces error code: 0)
[2025-06-04 12:18:25] 2025-06-04 16:18:25,677 | INFO     | traces error code: 0
[2025-06-04 12:18:25] 2025-06-04 16:18:25,678 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-06-04 12:18:25] 2025-06-04 16:18:25,804 [wrapper] ==== pilot stdout END ====
[2025-06-04 12:18:25] 2025-06-04 16:18:25,806 [wrapper] ==== wrapper stdout RESUME ====
[2025-06-04 12:18:25] 2025-06-04 16:18:25,808 [wrapper] pilotpid: 1433336
[2025-06-04 12:18:25] 2025-06-04 16:18:25,810 [wrapper] Pilot exit status: 0
[2025-06-04 12:18:25] 2025-06-04 16:18:25,818 [wrapper] pandaids: 6667435839
[2025-06-04 12:18:25] 2025-06-04 16:18:25,855 [wrapper] cleanup supervisor_pilot 1574592 1433337
[2025-06-04 12:18:25] 2025-06-04 16:18:25,857 [wrapper] Test setup, not cleaning
[2025-06-04 12:18:25] 2025-06-04 16:18:25,859 [wrapper] apfmon messages muted
[2025-06-04 12:18:25] 2025-06-04 16:18:25,861 [wrapper] ==== wrapper stdout END ====
[2025-06-04 12:18:25] 2025-06-04 16:18:25,862 [wrapper] ==== wrapper stderr END ====
[2025-06-04 12:18:25]  *** Error codes and diagnostics ***
[2025-06-04 12:18:25]     "exeErrorCode": 0,
[2025-06-04 12:18:25]     "exeErrorDiag": "",
[2025-06-04 12:18:25]     "pilotErrorCode": 0,
[2025-06-04 12:18:25]     "pilotErrorDiag": "",
[2025-06-04 12:18:25]  *** Listing of results directory ***
[2025-06-04 12:18:25] total 419972
[2025-06-04 12:18:25] -rw-r--r--. 1 boincer umatlas    495897 May 27 15:34 pilot3.tar.gz
[2025-06-04 12:18:25] -rw-r--r--. 1 boincer umatlas      5111 May 27 15:40 queuedata.json
[2025-06-04 12:18:25] -rwx------. 1 boincer umatlas     37140 May 27 15:40 runpilot2-wrapper.sh
[2025-06-04 12:18:25] -rw-r--r--. 1 boincer umatlas       100 Jun  4 11:17 wrapper_26015_x86_64-pc-linux-gnu
[2025-06-04 12:18:25] -rwxr-xr-x. 1 boincer umatlas      7986 Jun  4 11:17 run_atlas
[2025-06-04 12:18:25] -rw-r--r--. 1 boincer umatlas       105 Jun  4 11:17 job.xml
[2025-06-04 12:18:25] -rw-r--r--. 2 boincer umatlas 226011519 Jun  4 11:17 EVNT.44871834._002846.pool.root.1
[2025-06-04 12:18:25] -rw-r--r--. 2 boincer umatlas     15093 Jun  4 11:17 start_atlas.sh
[2025-06-04 12:18:25] drwxrwx--x. 2 boincer umatlas      4096 Jun  4 11:17 shared
[2025-06-04 12:18:25] -rw-r--r--. 2 boincer umatlas    508878 Jun  4 11:17 input.tar.gz
[2025-06-04 12:18:25] -rw-r--r--. 1 boincer umatlas         0 Jun  4 11:17 boinc_lockfile
[2025-06-04 12:18:25] -rw-r--r--. 1 boincer umatlas      2559 Jun  4 11:17 pandaJob.out
[2025-06-04 12:18:25] -rw-------. 1 boincer umatlas    987207 Jun  4 11:17 agis_schedconf.cvmfs.json
[2025-06-04 12:18:25] -rw-------. 1 boincer umatlas   1598969 Jun  4 11:17 agis_ddmendpoints.agis.ALL.json
[2025-06-04 12:18:25] drwx------. 4 boincer umatlas      4096 Jun  4 11:17 pilot3
[2025-06-04 12:18:25] -rw-r--r--. 1 boincer umatlas      6842 Jun  4 12:10 init_data.xml
[2025-06-04 12:18:25] -rw-------. 1 boincer umatlas 198750916 Jun  4 12:17 HITS.44871837._072498.pool.root.1
[2025-06-04 12:18:25] -rw-r--r--. 1 boincer umatlas       529 Jun  4 12:17 boinc_task_state.xml
[2025-06-04 12:18:25] -rw-------. 1 boincer umatlas        95 Jun  4 12:17 pilot_heartbeat.json
[2025-06-04 12:18:25] -rw-------. 1 boincer umatlas      1027 Jun  4 12:18 memory_monitor_summary.json
[2025-06-04 12:18:25] -rw-------. 1 boincer umatlas    357663 Jun  4 12:18 log.44871837._072498.job.log.tgz.1
[2025-06-04 12:18:25] -rw-------. 1 boincer umatlas      7708 Jun  4 12:18 heartbeat.json
[2025-06-04 12:18:25] -rw-r--r--. 1 boincer umatlas        27 Jun  4 12:18 wrapper_checkpoint.txt
[2025-06-04 12:18:25] -rw-r--r--. 1 boincer umatlas      8192 Jun  4 12:18 boinc_mmap_file
[2025-06-04 12:18:25] -rw-------. 1 boincer umatlas      4662 Jun  4 12:18 pilotlog.txt
[2025-06-04 12:18:25] -rw-------. 1 boincer umatlas    369326 Jun  4 12:18 log.44871837._072498.job.log.1
[2025-06-04 12:18:25] -rw-------. 1 boincer umatlas       357 Jun  4 12:18 output.list
[2025-06-04 12:18:25] -rw-r--r--. 1 boincer umatlas       620 Jun  4 12:18 runtime_log
[2025-06-04 12:18:25] -rw-------. 1 boincer umatlas    747520 Jun  4 12:18 result.tar.gz
[2025-06-04 12:18:25] -rw-r--r--. 1 boincer umatlas      8666 Jun  4 12:18 runtime_log.err
[2025-06-04 12:18:25] -rw-------. 1 boincer umatlas       653 Jun  4 12:18 iJMLDmQLFe7nsSi4ap6QjLDmwznN0nGgGQJmUXzaDm2FaKDmGTniNm.diag
[2025-06-04 12:18:25] -rw-r--r--. 1 boincer umatlas     21489 Jun  4 12:18 stderr.txt
[2025-06-04 12:18:25] HITS file was successfully produced:
[2025-06-04 12:18:25] -rw-------. 1 boincer umatlas 198750916 Jun  4 12:17 shared/HITS.pool.root.1
[2025-06-04 12:18:25]  *** Contents of shared directory: ***
[2025-06-04 12:18:25] total 416060
[2025-06-04 12:18:25] -rw-r--r--. 2 boincer umatlas 226011519 Jun  4 11:17 ATLAS.root_0
[2025-06-04 12:18:25] -rw-r--r--. 2 boincer umatlas     15093 Jun  4 11:17 start_atlas.sh
[2025-06-04 12:18:25] -rw-r--r--. 2 boincer umatlas    508878 Jun  4 11:17 input.tar.gz
[2025-06-04 12:18:25] -rw-------. 1 boincer umatlas 198750916 Jun  4 12:17 HITS.pool.root.1
[2025-06-04 12:18:25] -rw-------. 1 boincer umatlas    747520 Jun  4 12:18 result.tar.gz
12:18:27 (1429378): run_atlas exited; CPU time 38305.593495
12:18:27 (1429378): called boinc_finish(0)

</stderr_txt>
]]>

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