Stderr output

<core_client_version>7.7.0</core_client_version>
<![CDATA[
<stderr_txt>
10:35:34 (52491): wrapper (7.7.26015): starting
10:35:34 (52491): wrapper: running run_atlas (--nthreads 8)
[2025-06-04 10:35:34] Arguments: --nthreads 8
[2025-06-04 10:35:34] Threads: 8
[2025-06-04 10:35:34] Checking for CVMFS
[2025-06-04 10:35:35] Probing /cvmfs/atlas.cern.ch... OK
[2025-06-04 10:35:35] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-06-04 10:35:35] Running cvmfs_config stat atlas.cern.ch
[2025-06-04 10:35:36] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-06-04 10:35:36] 2.11.2.0 72091 1251 129960 146781 1 454 18372076 18432000 13799 130560 0 20330004 99.896 3817679 75226 http://cvmfs-s1fnal.opensciencegrid.org:8000/cvmfs/atlas.cern.ch http://192.41.237.109:6081 1
[2025-06-04 10:35:36] CVMFS is ok
[2025-06-04 10:35:36] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-06-04 10:35:36] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2025-06-04 10:35:36] Further information can be found at the LHC@home message board.
[2025-06-04 10:35:36] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-06-04 10:35:36] Checking for apptainer binary...
[2025-06-04 10:35:36] Using apptainer found in PATH at /usr/bin/apptainer
[2025-06-04 10:35:36] Running /usr/bin/apptainer --version
[2025-06-04 10:35:36] apptainer version 1.3.2-1.el7
[2025-06-04 10:35:36] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-06-04 10:35:37] c-212-4.aglt2.org
[2025-06-04 10:35:37] apptainer works
[2025-06-04 10:35:37] Set ATHENA_PROC_NUMBER=8
[2025-06-04 10:35:37] Set ATHENA_CORE_NUMBER=8
[2025-06-04 10:35:37] Starting ATLAS job with PandaID=6679776689
[2025-06-04 10:35:37] Running command: /usr/bin/apptainer exec -B /cvmfs,/tmp/boinchome/slots/5 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-06-04 11:29:41]  *** The last 200 lines of the pilot log: ***
[2025-06-04 11:29:41]  is_tar=False
[2025-06-04 11:29:41]  lfn=log.45006595._056699.job.log.tgz.1
[2025-06-04 11:29:41]  mtime=0
[2025-06-04 11:29:41]  protocol_id=None
[2025-06-04 11:29:41]  protocols=[{'endpoint': 'davs://dav.ndgf.org:443', 'flavour': 'WEBDAV', 'id': 331, 'path': '/atlas/disk/atlasdatadisk/rucio/'}]
[2025-06-04 11:29:41]  replicas=None
[2025-06-04 11:29:41]  scope=mc23_13p6TeV
[2025-06-04 11:29:41]  status=None
[2025-06-04 11:29:41]  status_code=0
[2025-06-04 11:29:41]  storage_token=
[2025-06-04 11:29:41]  surl=/tmp/boinchome/slots/5/PanDA_Pilot-6679776689/log.45006595._056699.job.log.tgz.1
[2025-06-04 11:29:41]  turl=davs://dav.ndgf.org:443/atlas/disk/atlasdatadisk/rucio/mc23_13p6TeV/34/9d/log.45006595._056699.job.log.tgz.1
[2025-06-04 11:29:41]  workdir=None
[2025-06-04 11:29:41] ]
[2025-06-04 11:29:41] 2025-06-04 15:29:13,563 | INFO     | transferring file log.45006595._056699.job.log.tgz.1 from /tmp/boinchome/slots/5/PanDA_Pilot-6679776689/log.45006595._056699.job.log.tgz.1 to /tmp/boinchome/slots/
[2025-06-04 11:29:41] 2025-06-04 15:29:13,564 | INFO     | executing command: /usr/bin/env mv /tmp/boinchome/slots/5/PanDA_Pilot-6679776689/log.45006595._056699.job.log.tgz.1 /tmp/boinchome/slots/5/log.45006595._056699.job
[2025-06-04 11:29:41] 2025-06-04 15:29:13,580 | INFO     | adding to output.list: log.45006595._056699.job.log.tgz.1 davs://dav.ndgf.org:443/atlas/disk/atlasdatadisk/rucio/mc23_13p6TeV/34/9d/log.45006595._056699.job.log.tg
[2025-06-04 11:29:41] 2025-06-04 15:29:13,581 | INFO     | alt stage-out settings: ['pl', 'write_lan', 'w', 'default'], allow_altstageout=False, remain_files=0, has_altstorage=True
[2025-06-04 11:29:41] 2025-06-04 15:29:13,581 | INFO     | summary of transferred files:
[2025-06-04 11:29:41] 2025-06-04 15:29:13,581 | INFO     |  -- lfn=log.45006595._056699.job.log.tgz.1, status_code=0, status=transferred
[2025-06-04 11:29:41] 2025-06-04 15:29:13,581 | INFO     | stage-out finished correctly
[2025-06-04 11:29:41] 2025-06-04 15:29:16,303 | WARNING  | process 63999 can no longer be monitored (due to stat problems) - aborting
[2025-06-04 11:29:41] 2025-06-04 15:29:16,303 | INFO     | using path: /tmp/boinchome/slots/5/PanDA_Pilot-6679776689/memory_monitor_summary.json (trf name=prmon)
[2025-06-04 11:29:41] 2025-06-04 15:29:16,497 | INFO     | number of running child processes to parent process 63999: 1
[2025-06-04 11:29:41] 2025-06-04 15:29:16,497 | INFO     | maximum number of monitored processes: 6
[2025-06-04 11:29:41] 2025-06-04 15:29:16,638 | INFO     | finished stage-out for finished payload, adding job to finished_jobs queue
[2025-06-04 11:29:41] 2025-06-04 15:29:18,081 | INFO     | job 6679776689 has state=finished
[2025-06-04 11:29:41] 2025-06-04 15:29:18,081 | INFO     | preparing for final server update for job 6679776689 in state='finished'
[2025-06-04 11:29:41] 2025-06-04 15:29:18,081 | INFO     | this job has now completed (state=finished)
[2025-06-04 11:29:41] 2025-06-04 15:29:18,081 | INFO     | pilot will not update the server (heartbeat message will be written to file)
[2025-06-04 11:29:41] 2025-06-04 15:29:18,081 | INFO     | log transfer has been attempted: DONE
[2025-06-04 11:29:41] 2025-06-04 15:29:18,081 | INFO     | job 6679776689 has finished - writing final server update
[2025-06-04 11:29:41] 2025-06-04 15:29:18,082 | INFO     | total number of processed events: 400 (read)
[2025-06-04 11:29:41] 2025-06-04 15:29:18,085 | INFO     | executing command: lscpu
[2025-06-04 11:29:41] 2025-06-04 15:29:18,122 | INFO     | executing command: export ATLAS_LOCAL_ROOT_BASE=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase;source ${ATLAS_LOCAL_ROOT_BASE}/user/atlasLocalSetup.sh --quiet;lsetup
[2025-06-04 11:29:41] 2025-06-04 15:29:19,000 | INFO     | monitor loop #242: job 0:6679776689 is in state 'finished'
[2025-06-04 11:29:41] 2025-06-04 15:29:19,000 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-06-04 11:29:41] 2025-06-04 15:29:21,234 | INFO     | CPU arch script returned: x86-64-v3
[2025-06-04 11:29:41] 2025-06-04 15:29:21,235 | INFO     | using path: /tmp/boinchome/slots/5/PanDA_Pilot-6679776689/memory_monitor_summary.json (trf name=prmon)
[2025-06-04 11:29:41] 2025-06-04 15:29:21,235 | INFO     | extracted standard info from prmon json
[2025-06-04 11:29:41] 2025-06-04 15:29:21,235 | INFO     | extracted standard memory fields from prmon json
[2025-06-04 11:29:41] 2025-06-04 15:29:21,235 | WARNING  | GPU info not found in prmon json: 'gpu'
[2025-06-04 11:29:41] 2025-06-04 15:29:21,235 | WARNING  | format EVNTtoHITS has no such key: dbData
[2025-06-04 11:29:41] 2025-06-04 15:29:21,235 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2025-06-04 11:29:41] 2025-06-04 15:29:21,236 | INFO     | fitting pss+swap vs Time
[2025-06-04 11:29:41] 2025-06-04 15:29:21,237 | INFO     | sum of square deviations: 28242390.0
[2025-06-04 11:29:41] 2025-06-04 15:29:21,237 | INFO     | sum of deviations: -2648799705.9999995
[2025-06-04 11:29:41] 2025-06-04 15:29:21,237 | INFO     | mean x: 1749049473.0
[2025-06-04 11:29:41] 2025-06-04 15:29:21,237 | INFO     | mean y: 2705436.5555555555
[2025-06-04 11:29:41] 2025-06-04 15:29:21,237 | INFO     | -- intersect: 164042708066.00208
[2025-06-04 11:29:41] 2025-06-04 15:29:21,237 | INFO     | intersect: 164042708066.00208
[2025-06-04 11:29:41] 2025-06-04 15:29:21,237 | INFO     | chi2: 0.05099420372153166
[2025-06-04 11:29:41] 2025-06-04 15:29:21,237 | INFO     | -- intersect: 164042708066.00208
[2025-06-04 11:29:41] 2025-06-04 15:29:21,237 | INFO     | current memory leak: -93.79 B/s (using 45 data points, chi2=0.05)
[2025-06-04 11:29:41] 2025-06-04 15:29:21,237 | INFO     | ..............................
[2025-06-04 11:29:41] 2025-06-04 15:29:21,237 | INFO     | . Timing measurements:
[2025-06-04 11:29:41] 2025-06-04 15:29:21,238 | INFO     | . get job = 0 s
[2025-06-04 11:29:41] 2025-06-04 15:29:21,238 | INFO     | . initial setup = 2 s
[2025-06-04 11:29:41] 2025-06-04 15:29:21,238 | INFO     | . payload setup = 14 s
[2025-06-04 11:29:41] 2025-06-04 15:29:21,238 | INFO     | . stage-in = 0 s
[2025-06-04 11:29:41] 2025-06-04 15:29:21,238 | INFO     | . payload execution = 3135 s
[2025-06-04 11:29:41] 2025-06-04 15:29:21,238 | INFO     | . stage-out = 0 s
[2025-06-04 11:29:41] 2025-06-04 15:29:21,238 | INFO     | . log creation = 0 s
[2025-06-04 11:29:41] 2025-06-04 15:29:21,238 | INFO     | ..............................
[2025-06-04 11:29:41] 2025-06-04 15:29:21,306 | INFO     | 
[2025-06-04 11:29:41] 2025-06-04 15:29:21,306 | INFO     | job summary report
[2025-06-04 11:29:41] 2025-06-04 15:29:21,306 | INFO     | --------------------------------------------------
[2025-06-04 11:29:41] 2025-06-04 15:29:21,306 | INFO     | PanDA job id: 6679776689
[2025-06-04 11:29:41] 2025-06-04 15:29:21,306 | INFO     | task id: 45006595
[2025-06-04 11:29:41] 2025-06-04 15:29:21,306 | INFO     | errors: (none)
[2025-06-04 11:29:41] 2025-06-04 15:29:21,306 | INFO     | status: LOG_TRANSFER = DONE 
[2025-06-04 11:29:41] 2025-06-04 15:29:21,306 | INFO     | pilot state: finished 
[2025-06-04 11:29:41] 2025-06-04 15:29:21,306 | INFO     | transexitcode: 0
[2025-06-04 11:29:41] 2025-06-04 15:29:21,306 | INFO     | exeerrorcode: 0
[2025-06-04 11:29:41] 2025-06-04 15:29:21,306 | INFO     | exeerrordiag: 
[2025-06-04 11:29:41] 2025-06-04 15:29:21,306 | INFO     | exitcode: 0
[2025-06-04 11:29:41] 2025-06-04 15:29:21,306 | INFO     | exitmsg: OK
[2025-06-04 11:29:41] 2025-06-04 15:29:21,306 | INFO     | cpuconsumptiontime: 22171 s
[2025-06-04 11:29:41] 2025-06-04 15:29:21,306 | INFO     | nevents: 400
[2025-06-04 11:29:41] 2025-06-04 15:29:21,306 | INFO     | neventsw: 0
[2025-06-04 11:29:41] 2025-06-04 15:29:21,306 | INFO     | pid: 63999
[2025-06-04 11:29:41] 2025-06-04 15:29:21,306 | INFO     | pgrp: 63999
[2025-06-04 11:29:41] 2025-06-04 15:29:21,306 | INFO     | corecount: 8
[2025-06-04 11:29:41] 2025-06-04 15:29:21,306 | INFO     | event service: False
[2025-06-04 11:29:41] 2025-06-04 15:29:21,306 | INFO     | sizes: {0: 2397118, 1: 2397317, 11: 2397317, 19: 2397551, 22: 2397579, 3153: 2423172, 3155: 2432113, 3158: 2432169, 3163: 2432339}
[2025-06-04 11:29:41] 2025-06-04 15:29:21,307 | INFO     | --------------------------------------------------
[2025-06-04 11:29:41] 2025-06-04 15:29:21,307 | INFO     | 
[2025-06-04 11:29:41] 2025-06-04 15:29:21,307 | INFO     | executing command: ls -lF /tmp/boinchome/slots/5
[2025-06-04 11:29:41] 2025-06-04 15:29:21,324 | INFO     | queue jobs had 0 job(s) [purged]
[2025-06-04 11:29:41] 2025-06-04 15:29:21,324 | INFO     | queue payloads had 0 job(s) [purged]
[2025-06-04 11:29:41] 2025-06-04 15:29:21,324 | INFO     | queue data_in had 0 job(s) [purged]
[2025-06-04 11:29:41] 2025-06-04 15:29:21,324 | INFO     | queue data_out had 0 job(s) [purged]
[2025-06-04 11:29:41] 2025-06-04 15:29:21,324 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-06-04 11:29:41] 2025-06-04 15:29:21,324 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-06-04 11:29:41] 2025-06-04 15:29:21,324 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-06-04 11:29:41] 2025-06-04 15:29:21,324 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-06-04 11:29:41] 2025-06-04 15:29:21,324 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-06-04 11:29:41] 2025-06-04 15:29:21,324 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-06-04 11:29:41] 2025-06-04 15:29:21,325 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-06-04 11:29:41] 2025-06-04 15:29:21,325 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-06-04 11:29:41] 2025-06-04 15:29:21,325 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-06-04 11:29:41] 2025-06-04 15:29:21,325 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-06-04 11:29:41] 2025-06-04 15:29:21,325 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-06-04 11:29:41] 2025-06-04 15:29:21,325 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-06-04 11:29:41] 2025-06-04 15:29:21,325 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-06-04 11:29:41] 2025-06-04 15:29:21,325 | INFO     | queue completed_jobids has 1 job(s)
[2025-06-04 11:29:41] 2025-06-04 15:29:21,325 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-06-04 11:29:41] 2025-06-04 15:29:21,325 | INFO     | queue messages had 0 job(s) [purged]
[2025-06-04 11:29:41] 2025-06-04 15:29:21,325 | INFO     | job 6679776689 has completed (purged errors)
[2025-06-04 11:29:41] 2025-06-04 15:29:21,325 | INFO     | overall cleanup function is called
[2025-06-04 11:29:41] 2025-06-04 15:29:22,197 | INFO     | PID=56232 has CPU usage=8.0% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i PR 
[2025-06-04 11:29:41] 2025-06-04 15:29:22,197 | INFO     | .. there are 15 such processes running
[2025-06-04 11:29:41] 2025-06-04 15:29:22,332 | INFO     | --- collectZombieJob: --- 10, [63999]
[2025-06-04 11:29:41] 2025-06-04 15:29:22,333 | INFO     | zombie collector waiting for pid 63999
[2025-06-04 11:29:41] 2025-06-04 15:29:22,333 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-06-04 11:29:41] 2025-06-04 15:29:22,333 | INFO     | collected zombie processes
[2025-06-04 11:29:41] 2025-06-04 15:29:22,333 | INFO     | will attempt to kill all subprocesses of pid=63999
[2025-06-04 11:29:41] 2025-06-04 15:29:22,467 | INFO     | process IDs to be killed: [63999] (in reverse order)
[2025-06-04 11:29:41] 2025-06-04 15:29:22,543 | WARNING  | found no corresponding commands to process id(s)
[2025-06-04 11:29:41] 2025-06-04 15:29:22,544 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-06-04 11:29:41] 2025-06-04 15:29:22,549 | INFO     | did not find any defunct processes belonging to 63999
[2025-06-04 11:29:41] 2025-06-04 15:29:22,552 | INFO     | did not find any defunct processes belonging to 63999
[2025-06-04 11:29:41] 2025-06-04 15:29:22,552 | INFO     | ready for new job
[2025-06-04 11:29:41] 2025-06-04 15:29:22,552 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-06-04 11:29:41] 2025-06-04 15:29:22,553 | INFO     | **************************************
[2025-06-04 11:29:41] 2025-06-04 15:29:22,553 | INFO     | ***  PanDA Pilot version 3.10.2.2  ***
[2025-06-04 11:29:41] 2025-06-04 15:29:22,553 | INFO     | **************************************
[2025-06-04 11:29:41] 2025-06-04 15:29:22,553 | INFO     | 
[2025-06-04 11:29:41] 2025-06-04 15:29:22,556 | INFO     | architecture information:
[2025-06-04 11:29:41] 2025-06-04 15:29:22,556 | INFO     | executing command: cat /etc/os-release
[2025-06-04 11:29:41] 2025-06-04 15:29:22,572 | INFO     | cat /etc/os-release:
[2025-06-04 11:29:41] NAME="CentOS Linux"
[2025-06-04 11:29:41] VERSION="7 (Core)"
[2025-06-04 11:29:41] ID="centos"
[2025-06-04 11:29:41] ID_LIKE="rhel fedora"
[2025-06-04 11:29:41] VERSION_ID="7"
[2025-06-04 11:29:41] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-06-04 11:29:41] ANSI_COLOR="0;31"
[2025-06-04 11:29:41] CPE_NAME="cpe:/o:centos:centos:7"
[2025-06-04 11:29:41] HOME_URL="https://www.centos.org/"
[2025-06-04 11:29:41] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-06-04 11:29:41] 
[2025-06-04 11:29:41] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-06-04 11:29:41] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-06-04 11:29:41] REDHAT_SUPPORT_PRODUCT="centos"
[2025-06-04 11:29:41] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-06-04 11:29:41] 
[2025-06-04 11:29:41] 2025-06-04 15:29:22,572 | INFO     | **************************************
[2025-06-04 11:29:41] 2025-06-04 15:29:23,075 | INFO     | executing command: df -mP /tmp/boinchome/slots/5
[2025-06-04 11:29:41] 2025-06-04 15:29:23,086 | INFO     | sufficient remaining disk space (105489891328 B)
[2025-06-04 11:29:41] 2025-06-04 15:29:23,086 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-06-04 11:29:41] 2025-06-04 15:29:23,086 | INFO     | current server update state: UPDATING_FINAL
[2025-06-04 11:29:41] 2025-06-04 15:29:23,086 | INFO     | update_server=False
[2025-06-04 11:29:41] 2025-06-04 15:29:23,086 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-06-04 11:29:41] 2025-06-04 15:29:23,086 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-06-04 11:29:41] 2025-06-04 15:29:23,086 | INFO     | aborting loop
[2025-06-04 11:29:41] 2025-06-04 15:29:23,086 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-06-04 11:29:41] 2025-06-04 15:29:23,086 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-06-04 11:29:41] 2025-06-04 15:29:23,087 | WARNING  | aborting monitor loop since graceful_stop has been set (timing out remaining threads)
[2025-06-04 11:29:41] 2025-06-04 15:29:23,087 | INFO     | found 0 job(s) in 20 queues
[2025-06-04 11:29:41] 2025-06-04 15:29:23,087 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-06-04 11:29:41] 2025-06-04 15:29:23,087 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-06-04 11:29:41] 2025-06-04 15:29:23,414 | INFO     | all data control threads have been joined
[2025-06-04 11:29:41] 2025-06-04 15:29:23,721 | INFO     | all payload control threads have been joined
[2025-06-04 11:29:41] 2025-06-04 15:29:24,091 | INFO     | [job] queue monitor thread has finished
[2025-06-04 11:29:41] 2025-06-04 15:29:24,092 | INFO     | [job] retrieve thread has finished
[2025-06-04 11:29:41] 2025-06-04 15:29:24,092 | INFO     | [job] job monitor thread has finished
[2025-06-04 11:29:41] 2025-06-04 15:29:24,128 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-06-04 11:29:41] 2025-06-04 15:29:24,221 | INFO     | [payload] validate_pre thread has finished
[2025-06-04 11:29:41] 2025-06-04 15:29:24,359 | INFO     | [data] copytool_in thread has finished
[2025-06-04 11:29:41] 2025-06-04 15:29:24,359 | INFO     | [job] validate thread has finished
[2025-06-04 11:29:41] 2025-06-04 15:29:24,393 | INFO     | all job control threads have been joined
[2025-06-04 11:29:41] 2025-06-04 15:29:24,420 | INFO     | [data] control thread has finished
[2025-06-04 11:29:41] 2025-06-04 15:29:24,710 | INFO     | [payload] execute_payloads thread has finished
[2025-06-04 11:29:41] 2025-06-04 15:29:24,726 | INFO     | [payload] control thread has finished
[2025-06-04 11:29:41] 2025-06-04 15:29:25,334 | INFO     | [payload] failed_post thread has finished
[2025-06-04 11:29:41] 2025-06-04 15:29:25,397 | INFO     | [job] control thread has finished
[2025-06-04 11:29:41] 2025-06-04 15:29:25,539 | INFO     | [job] create_data_payload thread has finished
[2025-06-04 11:29:41] 2025-06-04 15:29:25,569 | INFO     | [payload] validate_post thread has finished
[2025-06-04 11:29:41] 2025-06-04 15:29:26,133 | INFO     | [data] copytool_out thread has finished
[2025-06-04 11:29:41] 2025-06-04 15:29:27,094 | INFO     | [data] queue_monitor thread has finished
[2025-06-04 11:29:41] 2025-06-04 15:29:34,089 | INFO     | job.realtimelogging is not enabled
[2025-06-04 11:29:41] 2025-06-04 15:29:35,094 | INFO     | [payload] run_realtimelog thread has finished
[2025-06-04 11:29:41] 2025-06-04 15:29:36,066 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140697853298496)>', '<ExcThread(monitor, started 140697273358080)>']
[2025-06-04 11:29:41] 2025-06-04 15:29:36,155 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-06-04 11:29:41] 2025-06-04 15:29:36,155 | INFO     | [monitor] control thread has ended
[2025-06-04 11:29:41] 2025-06-04 15:29:41,091 | INFO     | all workflow threads have been joined
[2025-06-04 11:29:41] 2025-06-04 15:29:41,091 | INFO     | end of generic workflow (traces error code: 0)
[2025-06-04 11:29:41] 2025-06-04 15:29:41,092 | INFO     | traces error code: 0
[2025-06-04 11:29:41] 2025-06-04 15:29:41,092 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-06-04 11:29:41] 2025-06-04 15:29:41,199 [wrapper] ==== pilot stdout END ====
[2025-06-04 11:29:41] 2025-06-04 15:29:41,200 [wrapper] ==== wrapper stdout RESUME ====
[2025-06-04 11:29:41] 2025-06-04 15:29:41,203 [wrapper] pilotpid: 56232
[2025-06-04 11:29:41] 2025-06-04 15:29:41,206 [wrapper] Pilot exit status: 0
[2025-06-04 11:29:41] 2025-06-04 15:29:41,317 [wrapper] pandaids: 6679776689
[2025-06-04 11:29:41] 2025-06-04 15:29:41,376 [wrapper] cleanup supervisor_pilot 74043 56233
[2025-06-04 11:29:41] 2025-06-04 15:29:41,379 [wrapper] Test setup, not cleaning
[2025-06-04 11:29:41] 2025-06-04 15:29:41,382 [wrapper] apfmon messages muted
[2025-06-04 11:29:41] 2025-06-04 15:29:41,384 [wrapper] ==== wrapper stdout END ====
[2025-06-04 11:29:41] 2025-06-04 15:29:41,386 [wrapper] ==== wrapper stderr END ====
[2025-06-04 11:29:41]  *** Error codes and diagnostics ***
[2025-06-04 11:29:41]     "exeErrorCode": 0,
[2025-06-04 11:29:41]     "exeErrorDiag": "",
[2025-06-04 11:29:41]     "pilotErrorCode": 0,
[2025-06-04 11:29:41]     "pilotErrorDiag": "",
[2025-06-04 11:29:41]  *** Listing of results directory ***
[2025-06-04 11:29:41] total 386368
[2025-06-04 11:29:41] -rw-r--r-- 1 boincer umatlas    495897 Jun  4 09:47 pilot3.tar.gz
[2025-06-04 11:29:41] -rwx------ 1 boincer umatlas     37140 Jun  4 10:15 runpilot2-wrapper.sh
[2025-06-04 11:29:41] -rw-r--r-- 1 boincer umatlas      5111 Jun  4 10:15 queuedata.json
[2025-06-04 11:29:41] -rw-r--r-- 1 boincer umatlas       100 Jun  4 10:35 wrapper_26015_x86_64-pc-linux-gnu
[2025-06-04 11:29:41] -rwxr-xr-x 1 boincer umatlas      7986 Jun  4 10:35 run_atlas
[2025-06-04 11:29:41] -rw-r--r-- 1 boincer umatlas       105 Jun  4 10:35 job.xml
[2025-06-04 11:29:41] -rw-r--r-- 2 boincer umatlas 215454812 Jun  4 10:35 EVNT.45006593._000989.pool.root.1
[2025-06-04 11:29:41] -rw-r--r-- 2 boincer umatlas     15093 Jun  4 10:35 start_atlas.sh
[2025-06-04 11:29:41] drwxrwx--x 2 boincer umatlas      4096 Jun  4 10:35 shared
[2025-06-04 11:29:41] -rw-r--r-- 2 boincer umatlas    508883 Jun  4 10:35 input.tar.gz
[2025-06-04 11:29:41] -rw-r--r-- 1 boincer umatlas         0 Jun  4 10:35 boinc_lockfile
[2025-06-04 11:29:41] -rw-r--r-- 1 boincer umatlas      2523 Jun  4 10:35 pandaJob.out
[2025-06-04 11:29:41] -rw------- 1 boincer umatlas    986819 Jun  4 10:36 agis_schedconf.cvmfs.json
[2025-06-04 11:29:41] -rw------- 1 boincer umatlas   1598969 Jun  4 10:36 agis_ddmendpoints.agis.ALL.json
[2025-06-04 11:29:41] drwx------ 4 boincer umatlas      4096 Jun  4 10:36 pilot3
[2025-06-04 11:29:41] -rw-r--r-- 1 boincer umatlas      6386 Jun  4 11:27 init_data.xml
[2025-06-04 11:29:41] -rw------- 1 boincer umatlas 175127359 Jun  4 11:28 HITS.45006595._056699.pool.root.1
[2025-06-04 11:29:41] -rw------- 1 boincer umatlas        95 Jun  4 11:28 pilot_heartbeat.json
[2025-06-04 11:29:41] -rw------- 1 boincer umatlas      1039 Jun  4 11:29 memory_monitor_summary.json
[2025-06-04 11:29:41] -rw-r--r-- 1 boincer umatlas       530 Jun  4 11:29 boinc_task_state.xml
[2025-06-04 11:29:41] -rw------- 1 boincer umatlas    285592 Jun  4 11:29 log.45006595._056699.job.log.tgz.1
[2025-06-04 11:29:41] -rw------- 1 boincer umatlas      7706 Jun  4 11:29 heartbeat.json
[2025-06-04 11:29:41] -rw-r--r-- 1 boincer umatlas        27 Jun  4 11:29 wrapper_checkpoint.txt
[2025-06-04 11:29:41] -rw-r--r-- 1 boincer umatlas      8192 Jun  4 11:29 boinc_mmap_file
[2025-06-04 11:29:41] -rw------- 1 boincer umatlas      4549 Jun  4 11:29 pilotlog.txt
[2025-06-04 11:29:41] -rw------- 1 boincer umatlas    330870 Jun  4 11:29 log.45006595._056699.job.log.1
[2025-06-04 11:29:41] -rw------- 1 boincer umatlas       357 Jun  4 11:29 output.list
[2025-06-04 11:29:41] -rw-r--r-- 1 boincer umatlas       620 Jun  4 11:29 runtime_log
[2025-06-04 11:29:41] -rw------- 1 boincer umatlas    634880 Jun  4 11:29 result.tar.gz
[2025-06-04 11:29:41] -rw-r--r-- 1 boincer umatlas      8654 Jun  4 11:29 runtime_log.err
[2025-06-04 11:29:41] -rw------- 1 boincer umatlas       657 Jun  4 11:29 HAJODmf43g7nsSi4ap6QjLDmwznN0nGgGQJmUXzaDmiznKDmC3zJGm.diag
[2025-06-04 11:29:41] -rw-r--r-- 1 boincer umatlas     21570 Jun  4 11:29 stderr.txt
[2025-06-04 11:29:41] HITS file was successfully produced:
[2025-06-04 11:29:41] -rw------- 1 boincer umatlas 175127359 Jun  4 11:28 shared/HITS.pool.root.1
[2025-06-04 11:29:41]  *** Contents of shared directory: ***
[2025-06-04 11:29:41] total 382572
[2025-06-04 11:29:41] -rw-r--r-- 2 boincer umatlas 215454812 Jun  4 10:35 ATLAS.root_0
[2025-06-04 11:29:41] -rw-r--r-- 2 boincer umatlas     15093 Jun  4 10:35 start_atlas.sh
[2025-06-04 11:29:41] -rw-r--r-- 2 boincer umatlas    508883 Jun  4 10:35 input.tar.gz
[2025-06-04 11:29:41] -rw------- 1 boincer umatlas 175127359 Jun  4 11:28 HITS.pool.root.1
[2025-06-04 11:29:41] -rw------- 1 boincer umatlas    634880 Jun  4 11:29 result.tar.gz
11:29:42 (52491): run_atlas exited; CPU time 22037.789164
11:29:42 (52491): called boinc_finish(0)

</stderr_txt>
]]>

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