Stderr output

<core_client_version>8.1.0</core_client_version>
<![CDATA[
<stderr_txt>
11:12:28 (4167567): wrapper (7.7.26015): starting
11:12:28 (4167567): wrapper: running run_atlas (--nthreads 12)
[2025-06-04 11:12:28] Arguments: --nthreads 12
[2025-06-04 11:12:28] Threads: 12
[2025-06-04 11:12:28] Checking for CVMFS
[2025-06-04 11:12:28] Probing /cvmfs/atlas.cern.ch... OK
[2025-06-04 11:12:28] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-06-04 11:12:28] Running cvmfs_config stat atlas.cern.ch
[2025-06-04 11:12:28] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-06-04 11:12:28] 2.12.6.0 2658689 23435 489992 146783 2 142 24558508 32935936 3757 16776704 1 94206728 99.589 116767446 34455 http://cvmfs-s1fnal.opensciencegrid.org:8000/cvmfs/atlas.cern.ch http://192.41.231.237:6081 1
[2025-06-04 11:12:28] CVMFS is ok
[2025-06-04 11:12:28] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-06-04 11:12:28] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2025-06-04 11:12:28] Further information can be found at the LHC@home message board.
[2025-06-04 11:12:28] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-06-04 11:12:28] Checking for apptainer binary...
[2025-06-04 11:12:28] Using apptainer found in PATH at /usr/bin/apptainer
[2025-06-04 11:12:28] Running /usr/bin/apptainer --version
[2025-06-04 11:12:28] apptainer version 1.4.1-1.el9
[2025-06-04 11:12:28] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-06-04 11:12:28] c6-5-7-2.aglt2.org
[2025-06-04 11:12:28] apptainer works
[2025-06-04 11:12:28] Set ATHENA_PROC_NUMBER=12
[2025-06-04 11:12:28] Set ATHENA_CORE_NUMBER=12
[2025-06-04 11:12:28] Starting ATLAS job with PandaID=6666850616
[2025-06-04 11:12:28] Running command: /usr/bin/apptainer exec -B /cvmfs,/tmp/boinchome/slots/0 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-06-04 11:56:56]  *** The last 200 lines of the pilot log: ***
[2025-06-04 11:56:56]  scope=mc23_13p6TeV
[2025-06-04 11:56:56]  status=None
[2025-06-04 11:56:56]  status_code=0
[2025-06-04 11:56:56]  storage_token=
[2025-06-04 11:56:56]  surl=/tmp/boinchome/slots/0/PanDA_Pilot-6666850616/log.44871837._064696.job.log.tgz.1
[2025-06-04 11:56:56]  turl=davs://dav.ndgf.org:443/atlas/disk/atlasdatadisk/rucio/mc23_13p6TeV/2e/21/log.44871837._064696.job.log.tgz.1
[2025-06-04 11:56:56]  workdir=None
[2025-06-04 11:56:56] ]
[2025-06-04 11:56:56] 2025-06-04 15:56:37,312 | INFO     | transferring file log.44871837._064696.job.log.tgz.1 from /tmp/boinchome/slots/0/PanDA_Pilot-6666850616/log.44871837._064696.job.log.tgz.1 to /tmp/boinchome/slots/
[2025-06-04 11:56:56] 2025-06-04 15:56:37,313 | INFO     | executing command: /usr/bin/env mv /tmp/boinchome/slots/0/PanDA_Pilot-6666850616/log.44871837._064696.job.log.tgz.1 /tmp/boinchome/slots/0/log.44871837._064696.job
[2025-06-04 11:56:56] 2025-06-04 15:56:37,324 | INFO     | adding to output.list: log.44871837._064696.job.log.tgz.1 davs://dav.ndgf.org:443/atlas/disk/atlasdatadisk/rucio/mc23_13p6TeV/2e/21/log.44871837._064696.job.log.tg
[2025-06-04 11:56:56] 2025-06-04 15:56:37,325 | INFO     | alt stage-out settings: ['pl', 'write_lan', 'w', 'default'], allow_altstageout=False, remain_files=0, has_altstorage=True
[2025-06-04 11:56:56] 2025-06-04 15:56:37,325 | INFO     | summary of transferred files:
[2025-06-04 11:56:56] 2025-06-04 15:56:37,325 | INFO     |  -- lfn=log.44871837._064696.job.log.tgz.1, status_code=0, status=transferred
[2025-06-04 11:56:56] 2025-06-04 15:56:37,325 | INFO     | stage-out finished correctly
[2025-06-04 11:56:56] 2025-06-04 15:56:40,778 | INFO     | finished stage-out for finished payload, adding job to finished_jobs queue
[2025-06-04 11:56:56] 2025-06-04 15:56:41,254 | INFO     | job 6666850616 has state=finished
[2025-06-04 11:56:56] 2025-06-04 15:56:41,254 | INFO     | preparing for final server update for job 6666850616 in state='finished'
[2025-06-04 11:56:56] 2025-06-04 15:56:41,254 | INFO     | this job has now completed (state=finished)
[2025-06-04 11:56:56] 2025-06-04 15:56:41,255 | INFO     | pilot will not update the server (heartbeat message will be written to file)
[2025-06-04 11:56:56] 2025-06-04 15:56:41,255 | INFO     | log transfer has been attempted: DONE
[2025-06-04 11:56:56] 2025-06-04 15:56:41,255 | INFO     | job 6666850616 has finished - writing final server update
[2025-06-04 11:56:56] 2025-06-04 15:56:41,255 | INFO     | total number of processed events: 400 (read)
[2025-06-04 11:56:56] 2025-06-04 15:56:41,270 | INFO     | executing command: lscpu
[2025-06-04 11:56:56] 2025-06-04 15:56:41,316 | WARNING  | process 4178171 can no longer be monitored (due to stat problems) - aborting
[2025-06-04 11:56:56] 2025-06-04 15:56:41,317 | INFO     | using path: /tmp/boinchome/slots/0/PanDA_Pilot-6666850616/memory_monitor_summary.json (trf name=prmon)
[2025-06-04 11:56:56] 2025-06-04 15:56:41,317 | INFO     | using path: /tmp/boinchome/slots/0/PanDA_Pilot-6666850616/memory_monitor_summary.json (trf name=prmon)
[2025-06-04 11:56:56] 2025-06-04 15:56:41,318 | INFO     | payload log (log.EVNTtoHITS) within allowed size limit (2147483648 B): 3724484 B
[2025-06-04 11:56:56] 2025-06-04 15:56:41,318 | INFO     | payload log (payload.stdout) within allowed size limit (2147483648 B): 16502 B
[2025-06-04 11:56:56] 2025-06-04 15:56:41,318 | INFO     | executing command: df -mP /tmp/boinchome/slots/0
[2025-06-04 11:56:56] 2025-06-04 15:56:41,327 | INFO     | executing command: export ATLAS_LOCAL_ROOT_BASE=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase;source ${ATLAS_LOCAL_ROOT_BASE}/user/atlasLocalSetup.sh --quiet;lsetup
[2025-06-04 11:56:56] 2025-06-04 15:56:41,328 | INFO     | sufficient remaining disk space (76544999424 B)
[2025-06-04 11:56:56] 2025-06-04 15:56:41,332 | INFO     | work directory size check will use 2537553920 B as a max limit (10% grace limit added)
[2025-06-04 11:56:56] 2025-06-04 15:56:41,333 | INFO     | size of work directory /tmp/boinchome/slots/0/PanDA_Pilot-6666850616: 4010715 B (within 2537553920 B limit)
[2025-06-04 11:56:56] 2025-06-04 15:56:41,334 | INFO     | pfn file=/tmp/boinchome/slots/0/PanDA_Pilot-6666850616/HITS.44871837._064696.pool.root.1 does not exist (skip from workdir size calculation)
[2025-06-04 11:56:56] 2025-06-04 15:56:41,334 | INFO     | total size of present files: 0 B (workdir size: 4010715 B)
[2025-06-04 11:56:56] 2025-06-04 15:56:41,334 | INFO     | output file size check: skipping output file /tmp/boinchome/slots/0/PanDA_Pilot-6666850616/HITS.44871837._064696.pool.root.1 since it does not exist
[2025-06-04 11:56:56] 2025-06-04 15:56:41,488 | INFO     | number of running child processes to parent process 4178171: 1
[2025-06-04 11:56:56] 2025-06-04 15:56:41,488 | INFO     | maximum number of monitored processes: 6
[2025-06-04 11:56:56] 2025-06-04 15:56:43,858 | INFO     | CPU arch script returned: x86-64-v4
[2025-06-04 11:56:56] 2025-06-04 15:56:43,858 | INFO     | using path: /tmp/boinchome/slots/0/PanDA_Pilot-6666850616/memory_monitor_summary.json (trf name=prmon)
[2025-06-04 11:56:56] 2025-06-04 15:56:43,858 | INFO     | extracted standard info from prmon json
[2025-06-04 11:56:56] 2025-06-04 15:56:43,858 | INFO     | extracted standard memory fields from prmon json
[2025-06-04 11:56:56] 2025-06-04 15:56:43,859 | WARNING  | GPU info not found in prmon json: 'gpu'
[2025-06-04 11:56:56] 2025-06-04 15:56:43,859 | WARNING  | format EVNTtoHITS has no such key: dbData
[2025-06-04 11:56:56] 2025-06-04 15:56:43,859 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2025-06-04 11:56:56] 2025-06-04 15:56:43,860 | INFO     | fitting pss+swap vs Time
[2025-06-04 11:56:56] 2025-06-04 15:56:43,860 | INFO     | sum of square deviations: 14456085.0
[2025-06-04 11:56:56] 2025-06-04 15:56:43,860 | INFO     | sum of deviations: -327221537.4999999
[2025-06-04 11:56:56] 2025-06-04 15:56:43,860 | INFO     | mean x: 1749051348.5
[2025-06-04 11:56:56] 2025-06-04 15:56:43,860 | INFO     | mean y: 2434448.0833333335
[2025-06-04 11:56:56] 2025-06-04 15:56:43,860 | INFO     | -- intersect: 39593186122.73232
[2025-06-04 11:56:56] 2025-06-04 15:56:43,860 | INFO     | intersect: 39593186122.73232
[2025-06-04 11:56:56] 2025-06-04 15:56:43,860 | INFO     | chi2: 0.03416889133953132
[2025-06-04 11:56:56] 2025-06-04 15:56:43,860 | INFO     | -- intersect: 39593186122.73232
[2025-06-04 11:56:56] 2025-06-04 15:56:43,860 | INFO     | current memory leak: -22.64 B/s (using 36 data points, chi2=0.03)
[2025-06-04 11:56:56] 2025-06-04 15:56:43,860 | INFO     | ..............................
[2025-06-04 11:56:56] 2025-06-04 15:56:43,860 | INFO     | . Timing measurements:
[2025-06-04 11:56:56] 2025-06-04 15:56:43,860 | INFO     | . get job = 0 s
[2025-06-04 11:56:56] 2025-06-04 15:56:43,860 | INFO     | . initial setup = 2 s
[2025-06-04 11:56:56] 2025-06-04 15:56:43,860 | INFO     | . payload setup = 4 s
[2025-06-04 11:56:56] 2025-06-04 15:56:43,861 | INFO     | . stage-in = 0 s
[2025-06-04 11:56:56] 2025-06-04 15:56:43,861 | INFO     | . payload execution = 2619 s
[2025-06-04 11:56:56] 2025-06-04 15:56:43,861 | INFO     | . stage-out = 0 s
[2025-06-04 11:56:56] 2025-06-04 15:56:43,861 | INFO     | . log creation = 0 s
[2025-06-04 11:56:56] 2025-06-04 15:56:43,861 | INFO     | ..............................
[2025-06-04 11:56:56] 2025-06-04 15:56:43,907 | INFO     | 
[2025-06-04 11:56:56] 2025-06-04 15:56:43,907 | INFO     | job summary report
[2025-06-04 11:56:56] 2025-06-04 15:56:43,907 | INFO     | --------------------------------------------------
[2025-06-04 11:56:56] 2025-06-04 15:56:43,907 | INFO     | PanDA job id: 6666850616
[2025-06-04 11:56:56] 2025-06-04 15:56:43,907 | INFO     | task id: 44871837
[2025-06-04 11:56:56] 2025-06-04 15:56:43,907 | INFO     | errors: (none)
[2025-06-04 11:56:56] 2025-06-04 15:56:43,907 | INFO     | status: LOG_TRANSFER = DONE 
[2025-06-04 11:56:56] 2025-06-04 15:56:43,908 | INFO     | pilot state: finished 
[2025-06-04 11:56:56] 2025-06-04 15:56:43,908 | INFO     | transexitcode: 0
[2025-06-04 11:56:56] 2025-06-04 15:56:43,908 | INFO     | exeerrorcode: 0
[2025-06-04 11:56:56] 2025-06-04 15:56:43,908 | INFO     | exeerrordiag: 
[2025-06-04 11:56:56] 2025-06-04 15:56:43,908 | INFO     | exitcode: 0
[2025-06-04 11:56:56] 2025-06-04 15:56:43,908 | INFO     | exitmsg: OK
[2025-06-04 11:56:56] 2025-06-04 15:56:43,908 | INFO     | cpuconsumptiontime: 27433 s
[2025-06-04 11:56:56] 2025-06-04 15:56:43,908 | INFO     | nevents: 400
[2025-06-04 11:56:56] 2025-06-04 15:56:43,908 | INFO     | neventsw: 0
[2025-06-04 11:56:56] 2025-06-04 15:56:43,908 | INFO     | pid: 4178171
[2025-06-04 11:56:56] 2025-06-04 15:56:43,908 | INFO     | pgrp: 4178171
[2025-06-04 11:56:56] 2025-06-04 15:56:43,908 | INFO     | corecount: 12
[2025-06-04 11:56:56] 2025-06-04 15:56:43,908 | INFO     | event service: False
[2025-06-04 11:56:56] 2025-06-04 15:56:43,908 | INFO     | sizes: {0: 2397385, 3: 2397591, 10: 2397619, 2627: 2422780, 2628: 2431721, 2632: 2431777, 2635: 2432167}
[2025-06-04 11:56:56] 2025-06-04 15:56:43,909 | INFO     | --------------------------------------------------
[2025-06-04 11:56:56] 2025-06-04 15:56:43,909 | INFO     | 
[2025-06-04 11:56:56] 2025-06-04 15:56:43,909 | INFO     | executing command: ls -lF /tmp/boinchome/slots/0
[2025-06-04 11:56:56] 2025-06-04 15:56:43,921 | INFO     | queue jobs had 0 job(s) [purged]
[2025-06-04 11:56:56] 2025-06-04 15:56:43,921 | INFO     | queue payloads had 0 job(s) [purged]
[2025-06-04 11:56:56] 2025-06-04 15:56:43,921 | INFO     | queue data_in had 0 job(s) [purged]
[2025-06-04 11:56:56] 2025-06-04 15:56:43,921 | INFO     | queue data_out had 0 job(s) [purged]
[2025-06-04 11:56:56] 2025-06-04 15:56:43,921 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-06-04 11:56:56] 2025-06-04 15:56:43,922 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-06-04 11:56:56] 2025-06-04 15:56:43,922 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-06-04 11:56:56] 2025-06-04 15:56:43,922 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-06-04 11:56:56] 2025-06-04 15:56:43,922 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-06-04 11:56:56] 2025-06-04 15:56:43,922 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-06-04 11:56:56] 2025-06-04 15:56:43,922 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-06-04 11:56:56] 2025-06-04 15:56:43,922 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-06-04 11:56:56] 2025-06-04 15:56:43,922 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-06-04 11:56:56] 2025-06-04 15:56:43,922 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-06-04 11:56:56] 2025-06-04 15:56:43,922 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-06-04 11:56:56] 2025-06-04 15:56:43,922 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-06-04 11:56:56] 2025-06-04 15:56:43,922 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-06-04 11:56:56] 2025-06-04 15:56:43,922 | INFO     | queue completed_jobids has 1 job(s)
[2025-06-04 11:56:56] 2025-06-04 15:56:43,923 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-06-04 11:56:56] 2025-06-04 15:56:43,923 | INFO     | queue messages had 0 job(s) [purged]
[2025-06-04 11:56:56] 2025-06-04 15:56:43,923 | INFO     | job 6666850616 has completed (purged errors)
[2025-06-04 11:56:56] 2025-06-04 15:56:43,923 | INFO     | overall cleanup function is called
[2025-06-04 11:56:56] 2025-06-04 15:56:44,931 | INFO     | --- collectZombieJob: --- 10, [4178171]
[2025-06-04 11:56:56] 2025-06-04 15:56:44,931 | INFO     | zombie collector waiting for pid 4178171
[2025-06-04 11:56:56] 2025-06-04 15:56:44,931 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-06-04 11:56:56] 2025-06-04 15:56:44,931 | INFO     | collected zombie processes
[2025-06-04 11:56:56] 2025-06-04 15:56:44,931 | INFO     | will attempt to kill all subprocesses of pid=4178171
[2025-06-04 11:56:56] 2025-06-04 15:56:45,096 | INFO     | process IDs to be killed: [4178171] (in reverse order)
[2025-06-04 11:56:56] 2025-06-04 15:56:45,144 | WARNING  | found no corresponding commands to process id(s)
[2025-06-04 11:56:56] 2025-06-04 15:56:45,144 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-06-04 11:56:56] 2025-06-04 15:56:45,149 | INFO     | did not find any defunct processes belonging to 4178171
[2025-06-04 11:56:56] 2025-06-04 15:56:45,154 | INFO     | did not find any defunct processes belonging to 4178171
[2025-06-04 11:56:56] 2025-06-04 15:56:45,154 | INFO     | ready for new job
[2025-06-04 11:56:56] 2025-06-04 15:56:45,154 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-06-04 11:56:56] 2025-06-04 15:56:45,155 | INFO     | **************************************
[2025-06-04 11:56:56] 2025-06-04 15:56:45,155 | INFO     | ***  PanDA Pilot version 3.10.2.2  ***
[2025-06-04 11:56:56] 2025-06-04 15:56:45,155 | INFO     | **************************************
[2025-06-04 11:56:56] 2025-06-04 15:56:45,155 | INFO     | 
[2025-06-04 11:56:56] 2025-06-04 15:56:45,169 | INFO     | architecture information:
[2025-06-04 11:56:56] 2025-06-04 15:56:45,169 | INFO     | executing command: cat /etc/os-release
[2025-06-04 11:56:56] 2025-06-04 15:56:45,179 | INFO     | cat /etc/os-release:
[2025-06-04 11:56:56] NAME="CentOS Linux"
[2025-06-04 11:56:56] VERSION="7 (Core)"
[2025-06-04 11:56:56] ID="centos"
[2025-06-04 11:56:56] ID_LIKE="rhel fedora"
[2025-06-04 11:56:56] VERSION_ID="7"
[2025-06-04 11:56:56] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-06-04 11:56:56] ANSI_COLOR="0;31"
[2025-06-04 11:56:56] CPE_NAME="cpe:/o:centos:centos:7"
[2025-06-04 11:56:56] HOME_URL="https://www.centos.org/"
[2025-06-04 11:56:56] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-06-04 11:56:56] 
[2025-06-04 11:56:56] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-06-04 11:56:56] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-06-04 11:56:56] REDHAT_SUPPORT_PRODUCT="centos"
[2025-06-04 11:56:56] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-06-04 11:56:56] 
[2025-06-04 11:56:56] 2025-06-04 15:56:45,179 | INFO     | **************************************
[2025-06-04 11:56:56] 2025-06-04 15:56:45,682 | INFO     | executing command: df -mP /tmp/boinchome/slots/0
[2025-06-04 11:56:56] 2025-06-04 15:56:45,691 | INFO     | sufficient remaining disk space (76549193728 B)
[2025-06-04 11:56:56] 2025-06-04 15:56:45,691 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-06-04 11:56:56] 2025-06-04 15:56:45,692 | INFO     | current server update state: UPDATING_FINAL
[2025-06-04 11:56:56] 2025-06-04 15:56:45,692 | INFO     | update_server=False
[2025-06-04 11:56:56] 2025-06-04 15:56:45,692 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-06-04 11:56:56] 2025-06-04 15:56:45,692 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-06-04 11:56:56] 2025-06-04 15:56:45,692 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-06-04 11:56:56] 2025-06-04 15:56:45,692 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-06-04 11:56:56] 2025-06-04 15:56:45,692 | INFO     | aborting loop
[2025-06-04 11:56:56] 2025-06-04 15:56:46,125 | INFO     | PID=4171196 has CPU usage=7.6% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i P
[2025-06-04 11:56:56] 2025-06-04 15:56:46,126 | INFO     | .. there are 8 such processes running
[2025-06-04 11:56:56] 2025-06-04 15:56:46,126 | INFO     | found 0 job(s) in 20 queues
[2025-06-04 11:56:56] 2025-06-04 15:56:46,126 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-06-04 11:56:56] 2025-06-04 15:56:46,126 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-06-04 11:56:56] 2025-06-04 15:56:46,441 | INFO     | all payload control threads have been joined
[2025-06-04 11:56:56] 2025-06-04 15:56:46,625 | INFO     | all data control threads have been joined
[2025-06-04 11:56:56] 2025-06-04 15:56:46,694 | INFO     | [job] retrieve thread has finished
[2025-06-04 11:56:56] 2025-06-04 15:56:46,697 | INFO     | [job] queue monitor thread has finished
[2025-06-04 11:56:56] 2025-06-04 15:56:46,698 | INFO     | [job] job monitor thread has finished
[2025-06-04 11:56:56] 2025-06-04 15:56:46,860 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-06-04 11:56:56] 2025-06-04 15:56:47,109 | INFO     | [payload] execute_payloads thread has finished
[2025-06-04 11:56:56] 2025-06-04 15:56:47,127 | INFO     | [data] copytool_in thread has finished
[2025-06-04 11:56:56] 2025-06-04 15:56:47,204 | INFO     | [job] validate thread has finished
[2025-06-04 11:56:56] 2025-06-04 15:56:47,385 | INFO     | [job] create_data_payload thread has finished
[2025-06-04 11:56:56] 2025-06-04 15:56:47,396 | INFO     | all job control threads have been joined
[2025-06-04 11:56:56] 2025-06-04 15:56:47,447 | INFO     | [payload] control thread has finished
[2025-06-04 11:56:56] 2025-06-04 15:56:47,453 | INFO     | [payload] validate_pre thread has finished
[2025-06-04 11:56:56] 2025-06-04 15:56:47,487 | INFO     | [payload] run_realtimelog thread has finished
[2025-06-04 11:56:56] 2025-06-04 15:56:47,539 | INFO     | [payload] failed_post thread has finished
[2025-06-04 11:56:56] 2025-06-04 15:56:47,630 | INFO     | [data] control thread has finished
[2025-06-04 11:56:56] 2025-06-04 15:56:47,697 | INFO     | [data] copytool_out thread has finished
[2025-06-04 11:56:56] 2025-06-04 15:56:48,113 | INFO     | [payload] validate_post thread has finished
[2025-06-04 11:56:56] 2025-06-04 15:56:48,401 | INFO     | [job] control thread has finished
[2025-06-04 11:56:56] 2025-06-04 15:56:50,865 | INFO     | [data] queue_monitor thread has finished
[2025-06-04 11:56:56] 2025-06-04 15:56:51,664 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140121813686080)>', '<ExcThread(monitor, started 140121470912256)>']
[2025-06-04 11:56:56] 2025-06-04 15:56:52,156 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-06-04 11:56:56] 2025-06-04 15:56:52,156 | INFO     | [monitor] control thread has ended
[2025-06-04 11:56:56] 2025-06-04 15:56:56,689 | INFO     | all workflow threads have been joined
[2025-06-04 11:56:56] 2025-06-04 15:56:56,690 | INFO     | end of generic workflow (traces error code: 0)
[2025-06-04 11:56:56] 2025-06-04 15:56:56,690 | INFO     | traces error code: 0
[2025-06-04 11:56:56] 2025-06-04 15:56:56,690 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-06-04 11:56:56] 2025-06-04 15:56:56,778 [wrapper] ==== pilot stdout END ====
[2025-06-04 11:56:56] 2025-06-04 15:56:56,779 [wrapper] ==== wrapper stdout RESUME ====
[2025-06-04 11:56:56] 2025-06-04 15:56:56,781 [wrapper] pilotpid: 4171196
[2025-06-04 11:56:56] 2025-06-04 15:56:56,782 [wrapper] Pilot exit status: 0
[2025-06-04 11:56:56] 2025-06-04 15:56:56,788 [wrapper] pandaids: 6666850616
[2025-06-04 11:56:56] 2025-06-04 15:56:56,822 [wrapper] cleanup supervisor_pilot   59507 4171197
[2025-06-04 11:56:56] 2025-06-04 15:56:56,824 [wrapper] Test setup, not cleaning
[2025-06-04 11:56:56] 2025-06-04 15:56:56,825 [wrapper] apfmon messages muted
[2025-06-04 11:56:56] 2025-06-04 15:56:56,827 [wrapper] ==== wrapper stdout END ====
[2025-06-04 11:56:56] 2025-06-04 15:56:56,828 [wrapper] ==== wrapper stderr END ====
[2025-06-04 11:56:56]  *** Error codes and diagnostics ***
[2025-06-04 11:56:56]     "exeErrorCode": 0,
[2025-06-04 11:56:56]     "exeErrorDiag": "",
[2025-06-04 11:56:56]     "pilotErrorCode": 0,
[2025-06-04 11:56:56]     "pilotErrorDiag": "",
[2025-06-04 11:56:56]  *** Listing of results directory ***
[2025-06-04 11:56:56] total 415788
[2025-06-04 11:56:56] -rw-r--r--. 1 boincer umatlas    495897 May 27 04:13 pilot3.tar.gz
[2025-06-04 11:56:56] -rw-r--r--. 1 boincer umatlas      5111 May 27 04:38 queuedata.json
[2025-06-04 11:56:56] -rwx------. 1 boincer umatlas     37140 May 27 04:41 runpilot2-wrapper.sh
[2025-06-04 11:56:56] -rw-r--r--. 1 boincer umatlas       100 Jun  4 11:12 wrapper_26015_x86_64-pc-linux-gnu
[2025-06-04 11:56:56] -rwxr-xr-x. 1 boincer umatlas      7986 Jun  4 11:12 run_atlas
[2025-06-04 11:56:56] -rw-r--r--. 1 boincer umatlas       105 Jun  4 11:12 job.xml
[2025-06-04 11:56:56] -rw-r--r--. 2 boincer umatlas 224000971 Jun  4 11:12 EVNT.44871834._002550.pool.root.1
[2025-06-04 11:56:56] -rw-r--r--. 2 boincer umatlas     15093 Jun  4 11:12 start_atlas.sh
[2025-06-04 11:56:56] drwxrwx--x. 2 boincer umatlas      4096 Jun  4 11:12 shared
[2025-06-04 11:56:56] -rw-r--r--. 2 boincer umatlas    508869 Jun  4 11:12 input.tar.gz
[2025-06-04 11:56:56] -rw-r--r--. 1 boincer umatlas         0 Jun  4 11:12 boinc_lockfile
[2025-06-04 11:56:56] -rw-r--r--. 1 boincer umatlas      2555 Jun  4 11:12 pandaJob.out
[2025-06-04 11:56:56] -rw-------. 1 boincer umatlas    987207 Jun  4 11:12 agis_schedconf.cvmfs.json
[2025-06-04 11:56:56] -rw-------. 1 boincer umatlas   1598969 Jun  4 11:12 agis_ddmendpoints.agis.ALL.json
[2025-06-04 11:56:56] drwx------. 4 boincer umatlas      4096 Jun  4 11:12 pilot3
[2025-06-04 11:56:56] -rw-r--r--. 1 boincer umatlas      6842 Jun  4 11:46 init_data.xml
[2025-06-04 11:56:56] -rw-------. 1 boincer umatlas        95 Jun  4 11:56 pilot_heartbeat.json
[2025-06-04 11:56:56] -rw-------. 1 boincer umatlas 196704116 Jun  4 11:56 HITS.44871837._064696.pool.root.1
[2025-06-04 11:56:56] -rw-r--r--. 1 boincer umatlas       529 Jun  4 11:56 boinc_task_state.xml
[2025-06-04 11:56:56] -rw-------. 1 boincer umatlas      1035 Jun  4 11:56 memory_monitor_summary.json
[2025-06-04 11:56:56] -rw-------. 1 boincer umatlas    330664 Jun  4 11:56 log.44871837._064696.job.log.tgz.1
[2025-06-04 11:56:56] -rw-r--r--. 1 boincer umatlas      8192 Jun  4 11:56 boinc_mmap_file
[2025-06-04 11:56:56] -rw-r--r--. 1 boincer umatlas        27 Jun  4 11:56 wrapper_checkpoint.txt
[2025-06-04 11:56:56] -rw-------. 1 boincer umatlas      7709 Jun  4 11:56 heartbeat.json
[2025-06-04 11:56:56] -rw-------. 1 boincer umatlas      4747 Jun  4 11:56 pilotlog.txt
[2025-06-04 11:56:56] -rw-------. 1 boincer umatlas    287048 Jun  4 11:56 log.44871837._064696.job.log.1
[2025-06-04 11:56:56] -rw-------. 1 boincer umatlas       357 Jun  4 11:56 output.list
[2025-06-04 11:56:56] -rw-r--r--. 1 boincer umatlas       620 Jun  4 11:56 runtime_log
[2025-06-04 11:56:56] -rw-------. 1 boincer umatlas    634880 Jun  4 11:56 result.tar.gz
[2025-06-04 11:56:56] -rw-------. 1 boincer umatlas       650 Jun  4 11:56 YTvKDmR34d7n9Rq4apOajLDm4fhM0noT9bVof3QYDmpZRKDmdydg6m.diag
[2025-06-04 11:56:56] -rw-r--r--. 1 boincer umatlas      8661 Jun  4 11:56 runtime_log.err
[2025-06-04 11:56:56] -rw-r--r--. 1 boincer umatlas     22221 Jun  4 11:56 stderr.txt
[2025-06-04 11:56:56] HITS file was successfully produced:
[2025-06-04 11:56:56] -rw-------. 1 boincer umatlas 196704116 Jun  4 11:56 shared/HITS.pool.root.1
[2025-06-04 11:56:56]  *** Contents of shared directory: ***
[2025-06-04 11:56:56] total 411984
[2025-06-04 11:56:56] -rw-r--r--. 2 boincer umatlas 224000971 Jun  4 11:12 ATLAS.root_0
[2025-06-04 11:56:56] -rw-r--r--. 2 boincer umatlas     15093 Jun  4 11:12 start_atlas.sh
[2025-06-04 11:56:56] -rw-r--r--. 2 boincer umatlas    508869 Jun  4 11:12 input.tar.gz
[2025-06-04 11:56:56] -rw-------. 1 boincer umatlas 196704116 Jun  4 11:56 HITS.pool.root.1
[2025-06-04 11:56:56] -rw-------. 1 boincer umatlas    634880 Jun  4 11:56 result.tar.gz
11:56:58 (4167567): run_atlas exited; CPU time 27461.410367
11:56:58 (4167567): called boinc_finish(0)

</stderr_txt>
]]>

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