Stderr output

<core_client_version>8.1.0</core_client_version>
<![CDATA[
<stderr_txt>
10:34:47 (1371909): wrapper (7.7.26015): starting
10:34:47 (1371909): wrapper: running run_atlas (--nthreads 8)
[2025-06-04 10:34:47] Arguments: --nthreads 8
[2025-06-04 10:34:47] Threads: 8
[2025-06-04 10:34:47] Checking for CVMFS
[2025-06-04 10:34:47] Probing /cvmfs/atlas.cern.ch... OK
[2025-06-04 10:34:47] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-06-04 10:34:47] Running cvmfs_config stat atlas.cern.ch
[2025-06-04 10:34:47] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-06-04 10:34:47] 2.12.6.0 844411 23391 520680 146781 0 202 16720167 32935937 13336 16776704 0 115879250 99.645 109583356 27930 http://cvmfs-s1fnal.opensciencegrid.org:8000/cvmfs/atlas.cern.ch http://192.41.231.237:6081 1
[2025-06-04 10:34:47] CVMFS is ok
[2025-06-04 10:34:47] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-06-04 10:34:47] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2025-06-04 10:34:47] Further information can be found at the LHC@home message board.
[2025-06-04 10:34:47] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-06-04 10:34:47] Checking for apptainer binary...
[2025-06-04 10:34:47] Using apptainer found in PATH at /usr/bin/apptainer
[2025-06-04 10:34:47] Running /usr/bin/apptainer --version
[2025-06-04 10:34:47] apptainer version 1.4.1-1.el9
[2025-06-04 10:34:47] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-06-04 10:34:47] c6-6-8-3.aglt2.org
[2025-06-04 10:34:47] apptainer works
[2025-06-04 10:34:47] Set ATHENA_PROC_NUMBER=8
[2025-06-04 10:34:47] Set ATHENA_CORE_NUMBER=8
[2025-06-04 10:34:47] Starting ATLAS job with PandaID=6666850550
[2025-06-04 10:34:47] Running command: /usr/bin/apptainer exec -B /cvmfs,/tmp/boinchome/slots/0 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-06-04 12:02:58]  *** The last 200 lines of the pilot log: ***
[2025-06-04 12:02:58]  filesize=306836
[2025-06-04 12:02:58]  filetype=log
[2025-06-04 12:02:58]  guid=ae65c1df-5050-42c5-82c2-502ee7c3c132
[2025-06-04 12:02:58]  inputddms=['NDGF-T1_DATADISK', 'CERN-PROD_DATADISK']
[2025-06-04 12:02:58]  is_altstaged=None
[2025-06-04 12:02:58]  is_tar=False
[2025-06-04 12:02:58]  lfn=log.44871837._064630.job.log.tgz.1
[2025-06-04 12:02:58]  mtime=0
[2025-06-04 12:02:58]  protocol_id=None
[2025-06-04 12:02:58]  protocols=[{'endpoint': 'davs://dav.ndgf.org:443', 'flavour': 'WEBDAV', 'id': 331, 'path': '/atlas/disk/atlasdatadisk/rucio/'}]
[2025-06-04 12:02:58]  replicas=None
[2025-06-04 12:02:58]  scope=mc23_13p6TeV
[2025-06-04 12:02:58]  status=None
[2025-06-04 12:02:58]  status_code=0
[2025-06-04 12:02:58]  storage_token=
[2025-06-04 12:02:58]  surl=/tmp/boinchome/slots/0/PanDA_Pilot-6666850550/log.44871837._064630.job.log.tgz.1
[2025-06-04 12:02:58]  turl=davs://dav.ndgf.org:443/atlas/disk/atlasdatadisk/rucio/mc23_13p6TeV/ae/9e/log.44871837._064630.job.log.tgz.1
[2025-06-04 12:02:58]  workdir=None
[2025-06-04 12:02:58] ]
[2025-06-04 12:02:58] 2025-06-04 16:02:31,749 | INFO     | transferring file log.44871837._064630.job.log.tgz.1 from /tmp/boinchome/slots/0/PanDA_Pilot-6666850550/log.44871837._064630.job.log.tgz.1 to /tmp/boinchome/slots/
[2025-06-04 12:02:58] 2025-06-04 16:02:31,749 | INFO     | executing command: /usr/bin/env mv /tmp/boinchome/slots/0/PanDA_Pilot-6666850550/log.44871837._064630.job.log.tgz.1 /tmp/boinchome/slots/0/log.44871837._064630.job
[2025-06-04 12:02:58] 2025-06-04 16:02:31,766 | INFO     | adding to output.list: log.44871837._064630.job.log.tgz.1 davs://dav.ndgf.org:443/atlas/disk/atlasdatadisk/rucio/mc23_13p6TeV/ae/9e/log.44871837._064630.job.log.tg
[2025-06-04 12:02:58] 2025-06-04 16:02:31,767 | INFO     | alt stage-out settings: ['pl', 'write_lan', 'w', 'default'], allow_altstageout=False, remain_files=0, has_altstorage=True
[2025-06-04 12:02:58] 2025-06-04 16:02:31,767 | INFO     | summary of transferred files:
[2025-06-04 12:02:58] 2025-06-04 16:02:31,767 | INFO     |  -- lfn=log.44871837._064630.job.log.tgz.1, status_code=0, status=transferred
[2025-06-04 12:02:58] 2025-06-04 16:02:31,767 | INFO     | stage-out finished correctly
[2025-06-04 12:02:58] 2025-06-04 16:02:32,066 | INFO     | monitor loop #387: job 0:6666850550 is in state 'finished'
[2025-06-04 12:02:58] 2025-06-04 16:02:32,067 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-06-04 12:02:58] 2025-06-04 16:02:33,022 | INFO     | finished stage-out for finished payload, adding job to finished_jobs queue
[2025-06-04 12:02:58] 2025-06-04 16:02:33,438 | INFO     | job 6666850550 has state=finished
[2025-06-04 12:02:58] 2025-06-04 16:02:33,438 | INFO     | preparing for final server update for job 6666850550 in state='finished'
[2025-06-04 12:02:58] 2025-06-04 16:02:33,439 | INFO     | this job has now completed (state=finished)
[2025-06-04 12:02:58] 2025-06-04 16:02:33,439 | INFO     | pilot will not update the server (heartbeat message will be written to file)
[2025-06-04 12:02:58] 2025-06-04 16:02:33,439 | INFO     | log transfer has been attempted: DONE
[2025-06-04 12:02:58] 2025-06-04 16:02:33,439 | INFO     | job 6666850550 has finished - writing final server update
[2025-06-04 12:02:58] 2025-06-04 16:02:33,439 | INFO     | total number of processed events: 400 (read)
[2025-06-04 12:02:58] 2025-06-04 16:02:33,456 | INFO     | executing command: lscpu
[2025-06-04 12:02:58] 2025-06-04 16:02:33,543 | INFO     | executing command: export ATLAS_LOCAL_ROOT_BASE=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase;source ${ATLAS_LOCAL_ROOT_BASE}/user/atlasLocalSetup.sh --quiet;lsetup
[2025-06-04 12:02:58] 2025-06-04 16:02:34,574 | INFO     | monitor loop #388: job 0:6666850550 is in state 'finished'
[2025-06-04 12:02:58] 2025-06-04 16:02:34,574 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-06-04 12:02:58] 2025-06-04 16:02:36,822 | INFO     | CPU arch script returned: x86-64-v4
[2025-06-04 12:02:58] 2025-06-04 16:02:36,823 | INFO     | using path: /tmp/boinchome/slots/0/PanDA_Pilot-6666850550/memory_monitor_summary.json (trf name=prmon)
[2025-06-04 12:02:58] 2025-06-04 16:02:36,824 | INFO     | extracted standard info from prmon json
[2025-06-04 12:02:58] 2025-06-04 16:02:36,824 | INFO     | extracted standard memory fields from prmon json
[2025-06-04 12:02:58] 2025-06-04 16:02:36,824 | WARNING  | GPU info not found in prmon json: 'gpu'
[2025-06-04 12:02:58] 2025-06-04 16:02:36,824 | WARNING  | format EVNTtoHITS has no such key: dbData
[2025-06-04 12:02:58] 2025-06-04 16:02:36,824 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2025-06-04 12:02:58] 2025-06-04 16:02:36,827 | INFO     | fitting pss+swap vs Time
[2025-06-04 12:02:58] 2025-06-04 16:02:36,827 | INFO     | sum of square deviations: 152858680.0
[2025-06-04 12:02:58] 2025-06-04 16:02:36,827 | INFO     | sum of deviations: 871423673.9999998
[2025-06-04 12:02:58] 2025-06-04 16:02:36,827 | INFO     | mean x: 1749050404.0
[2025-06-04 12:02:58] 2025-06-04 16:02:36,827 | INFO     | mean y: 2229512.860759494
[2025-06-04 12:02:58] 2025-06-04 16:02:36,828 | INFO     | -- intersect: -9968836108.4364
[2025-06-04 12:02:58] 2025-06-04 16:02:36,828 | INFO     | intersect: -9968836108.4364
[2025-06-04 12:02:58] 2025-06-04 16:02:36,828 | INFO     | chi2: 0.7023427963082693
[2025-06-04 12:02:58] 2025-06-04 16:02:36,828 | INFO     | -- intersect: -9968836108.4364
[2025-06-04 12:02:58] 2025-06-04 16:02:36,828 | INFO     | current memory leak: 5.70 B/s (using 79 data points, chi2=0.70)
[2025-06-04 12:02:58] 2025-06-04 16:02:36,829 | INFO     | ..............................
[2025-06-04 12:02:58] 2025-06-04 16:02:36,829 | INFO     | . Timing measurements:
[2025-06-04 12:02:58] 2025-06-04 16:02:36,829 | INFO     | . get job = 0 s
[2025-06-04 12:02:58] 2025-06-04 16:02:36,829 | INFO     | . initial setup = 2 s
[2025-06-04 12:02:58] 2025-06-04 16:02:36,829 | INFO     | . payload setup = 5 s
[2025-06-04 12:02:58] 2025-06-04 16:02:36,829 | INFO     | . stage-in = 0 s
[2025-06-04 12:02:58] 2025-06-04 16:02:36,829 | INFO     | . payload execution = 5230 s
[2025-06-04 12:02:58] 2025-06-04 16:02:36,829 | INFO     | . stage-out = 0 s
[2025-06-04 12:02:58] 2025-06-04 16:02:36,829 | INFO     | . log creation = 0 s
[2025-06-04 12:02:58] 2025-06-04 16:02:36,829 | INFO     | ..............................
[2025-06-04 12:02:58] 2025-06-04 16:02:36,886 | INFO     | 
[2025-06-04 12:02:58] 2025-06-04 16:02:36,886 | INFO     | job summary report
[2025-06-04 12:02:58] 2025-06-04 16:02:36,886 | INFO     | --------------------------------------------------
[2025-06-04 12:02:58] 2025-06-04 16:02:36,886 | INFO     | PanDA job id: 6666850550
[2025-06-04 12:02:58] 2025-06-04 16:02:36,886 | INFO     | task id: 44871837
[2025-06-04 12:02:58] 2025-06-04 16:02:36,886 | INFO     | errors: (none)
[2025-06-04 12:02:58] 2025-06-04 16:02:36,886 | INFO     | status: LOG_TRANSFER = DONE 
[2025-06-04 12:02:58] 2025-06-04 16:02:36,886 | INFO     | pilot state: finished 
[2025-06-04 12:02:58] 2025-06-04 16:02:36,886 | INFO     | transexitcode: 0
[2025-06-04 12:02:58] 2025-06-04 16:02:36,886 | INFO     | exeerrorcode: 0
[2025-06-04 12:02:58] 2025-06-04 16:02:36,887 | INFO     | exeerrordiag: 
[2025-06-04 12:02:58] 2025-06-04 16:02:36,887 | INFO     | exitcode: 0
[2025-06-04 12:02:58] 2025-06-04 16:02:36,887 | INFO     | exitmsg: OK
[2025-06-04 12:02:58] 2025-06-04 16:02:36,887 | INFO     | cpuconsumptiontime: 35971 s
[2025-06-04 12:02:58] 2025-06-04 16:02:36,887 | INFO     | nevents: 400
[2025-06-04 12:02:58] 2025-06-04 16:02:36,887 | INFO     | neventsw: 0
[2025-06-04 12:02:58] 2025-06-04 16:02:36,887 | INFO     | pid: 1386382
[2025-06-04 12:02:58] 2025-06-04 16:02:36,887 | INFO     | pgrp: 1386382
[2025-06-04 12:02:58] 2025-06-04 16:02:36,887 | INFO     | corecount: 8
[2025-06-04 12:02:58] 2025-06-04 16:02:36,887 | INFO     | event service: False
[2025-06-04 12:02:58] 2025-06-04 16:02:36,887 | INFO     | sizes: {0: 2396564, 1: 2397420, 5: 2397626, 12: 2397682, 5240: 2424001, 5241: 2432942, 5242: 2433126, 5246: 2433296}
[2025-06-04 12:02:58] 2025-06-04 16:02:36,887 | INFO     | --------------------------------------------------
[2025-06-04 12:02:58] 2025-06-04 16:02:36,887 | INFO     | 
[2025-06-04 12:02:58] 2025-06-04 16:02:36,887 | INFO     | executing command: ls -lF /tmp/boinchome/slots/0
[2025-06-04 12:02:58] 2025-06-04 16:02:36,907 | INFO     | queue jobs had 0 job(s) [purged]
[2025-06-04 12:02:58] 2025-06-04 16:02:36,907 | INFO     | queue payloads had 0 job(s) [purged]
[2025-06-04 12:02:58] 2025-06-04 16:02:36,907 | INFO     | queue data_in had 0 job(s) [purged]
[2025-06-04 12:02:58] 2025-06-04 16:02:36,908 | INFO     | queue data_out had 0 job(s) [purged]
[2025-06-04 12:02:58] 2025-06-04 16:02:36,908 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-06-04 12:02:58] 2025-06-04 16:02:36,908 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-06-04 12:02:58] 2025-06-04 16:02:36,908 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-06-04 12:02:58] 2025-06-04 16:02:36,908 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-06-04 12:02:58] 2025-06-04 16:02:36,908 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-06-04 12:02:58] 2025-06-04 16:02:36,908 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-06-04 12:02:58] 2025-06-04 16:02:36,908 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-06-04 12:02:58] 2025-06-04 16:02:36,908 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-06-04 12:02:58] 2025-06-04 16:02:36,908 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-06-04 12:02:58] 2025-06-04 16:02:36,908 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-06-04 12:02:58] 2025-06-04 16:02:36,908 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-06-04 12:02:58] 2025-06-04 16:02:36,908 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-06-04 12:02:58] 2025-06-04 16:02:36,908 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-06-04 12:02:58] 2025-06-04 16:02:36,908 | INFO     | queue completed_jobids has 1 job(s)
[2025-06-04 12:02:58] 2025-06-04 16:02:36,909 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-06-04 12:02:58] 2025-06-04 16:02:36,909 | INFO     | queue messages had 0 job(s) [purged]
[2025-06-04 12:02:58] 2025-06-04 16:02:36,909 | INFO     | job 6666850550 has completed (purged errors)
[2025-06-04 12:02:58] 2025-06-04 16:02:36,909 | INFO     | overall cleanup function is called
[2025-06-04 12:02:58] 2025-06-04 16:02:37,916 | INFO     | --- collectZombieJob: --- 10, [1386382]
[2025-06-04 12:02:58] 2025-06-04 16:02:37,916 | INFO     | zombie collector waiting for pid 1386382
[2025-06-04 12:02:58] 2025-06-04 16:02:37,917 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-06-04 12:02:58] 2025-06-04 16:02:37,917 | INFO     | collected zombie processes
[2025-06-04 12:02:58] 2025-06-04 16:02:37,917 | INFO     | will attempt to kill all subprocesses of pid=1386382
[2025-06-04 12:02:58] 2025-06-04 16:02:38,375 | INFO     | process IDs to be killed: [1386382] (in reverse order)
[2025-06-04 12:02:58] 2025-06-04 16:02:38,489 | WARNING  | found no corresponding commands to process id(s)
[2025-06-04 12:02:58] 2025-06-04 16:02:38,489 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-06-04 12:02:58] 2025-06-04 16:02:38,506 | INFO     | did not find any defunct processes belonging to 1386382
[2025-06-04 12:02:58] 2025-06-04 16:02:38,522 | INFO     | did not find any defunct processes belonging to 1386382
[2025-06-04 12:02:58] 2025-06-04 16:02:38,523 | INFO     | ready for new job
[2025-06-04 12:02:58] 2025-06-04 16:02:38,523 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-06-04 12:02:58] 2025-06-04 16:02:38,525 | INFO     | **************************************
[2025-06-04 12:02:58] 2025-06-04 16:02:38,525 | INFO     | ***  PanDA Pilot version 3.10.2.2  ***
[2025-06-04 12:02:58] 2025-06-04 16:02:38,525 | INFO     | **************************************
[2025-06-04 12:02:58] 2025-06-04 16:02:38,525 | INFO     | 
[2025-06-04 12:02:58] 2025-06-04 16:02:38,543 | INFO     | architecture information:
[2025-06-04 12:02:58] 2025-06-04 16:02:38,543 | INFO     | executing command: cat /etc/os-release
[2025-06-04 12:02:58] 2025-06-04 16:02:38,558 | INFO     | cat /etc/os-release:
[2025-06-04 12:02:58] NAME="CentOS Linux"
[2025-06-04 12:02:58] VERSION="7 (Core)"
[2025-06-04 12:02:58] ID="centos"
[2025-06-04 12:02:58] ID_LIKE="rhel fedora"
[2025-06-04 12:02:58] VERSION_ID="7"
[2025-06-04 12:02:58] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-06-04 12:02:58] ANSI_COLOR="0;31"
[2025-06-04 12:02:58] CPE_NAME="cpe:/o:centos:centos:7"
[2025-06-04 12:02:58] HOME_URL="https://www.centos.org/"
[2025-06-04 12:02:58] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-06-04 12:02:58] 
[2025-06-04 12:02:58] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-06-04 12:02:58] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-06-04 12:02:58] REDHAT_SUPPORT_PRODUCT="centos"
[2025-06-04 12:02:58] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-06-04 12:02:58] 
[2025-06-04 12:02:58] 2025-06-04 16:02:38,558 | INFO     | **************************************
[2025-06-04 12:02:58] 2025-06-04 16:02:39,061 | INFO     | executing command: df -mP /tmp/boinchome/slots/0
[2025-06-04 12:02:58] 2025-06-04 16:02:39,078 | INFO     | sufficient remaining disk space (95380570112 B)
[2025-06-04 12:02:58] 2025-06-04 16:02:39,078 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-06-04 12:02:58] 2025-06-04 16:02:39,078 | INFO     | current server update state: UPDATING_FINAL
[2025-06-04 12:02:58] 2025-06-04 16:02:39,079 | INFO     | update_server=False
[2025-06-04 12:02:58] 2025-06-04 16:02:39,079 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-06-04 12:02:58] 2025-06-04 16:02:39,079 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-06-04 12:02:58] 2025-06-04 16:02:39,079 | INFO     | aborting loop
[2025-06-04 12:02:58] 2025-06-04 16:02:39,120 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-06-04 12:02:58] 2025-06-04 16:02:39,207 | INFO     | all data control threads have been joined
[2025-06-04 12:02:58] 2025-06-04 16:02:39,344 | INFO     | found 0 job(s) in 20 queues
[2025-06-04 12:02:58] 2025-06-04 16:02:39,345 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-06-04 12:02:58] 2025-06-04 16:02:39,345 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-06-04 12:02:58] 2025-06-04 16:02:39,710 | INFO     | all job control threads have been joined
[2025-06-04 12:02:58] 2025-06-04 16:02:39,807 | INFO     | all payload control threads have been joined
[2025-06-04 12:02:58] 2025-06-04 16:02:39,852 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-06-04 12:02:58] 2025-06-04 16:02:40,084 | INFO     | [job] retrieve thread has finished
[2025-06-04 12:02:58] 2025-06-04 16:02:40,084 | INFO     | [job] job monitor thread has finished
[2025-06-04 12:02:58] 2025-06-04 16:02:40,118 | INFO     | [data] copytool_in thread has finished
[2025-06-04 12:02:58] 2025-06-04 16:02:40,213 | INFO     | [data] control thread has finished
[2025-06-04 12:02:58] 2025-06-04 16:02:40,393 | INFO     | [payload] execute_payloads thread has finished
[2025-06-04 12:02:58] 2025-06-04 16:02:40,687 | INFO     | [job] validate thread has finished
[2025-06-04 12:02:58] 2025-06-04 16:02:40,716 | INFO     | [job] control thread has finished
[2025-06-04 12:02:58] 2025-06-04 16:02:40,813 | INFO     | [payload] control thread has finished
[2025-06-04 12:02:58] 2025-06-04 16:02:40,921 | INFO     | [payload] failed_post thread has finished
[2025-06-04 12:02:58] 2025-06-04 16:02:41,087 | INFO     | [job] create_data_payload thread has finished
[2025-06-04 12:02:58] 2025-06-04 16:02:41,095 | INFO     | [payload] validate_pre thread has finished
[2025-06-04 12:02:58] 2025-06-04 16:02:41,532 | INFO     | [payload] validate_post thread has finished
[2025-06-04 12:02:58] 2025-06-04 16:02:41,857 | INFO     | [data] copytool_out thread has finished
[2025-06-04 12:02:58] 2025-06-04 16:02:41,896 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-06-04 12:02:58] 2025-06-04 16:02:42,901 | INFO     | [job] queue monitor thread has finished
[2025-06-04 12:02:58] 2025-06-04 16:02:43,126 | INFO     | [data] queue_monitor thread has finished
[2025-06-04 12:02:58] 2025-06-04 16:02:49,906 | INFO     | job.realtimelogging is not enabled
[2025-06-04 12:02:58] 2025-06-04 16:02:50,911 | INFO     | [payload] run_realtimelog thread has finished
[2025-06-04 12:02:58] 2025-06-04 16:02:52,872 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140022440552256)>', '<ExcThread(monitor, started 140021789071104)>']
[2025-06-04 12:02:58] 2025-06-04 16:02:53,406 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-06-04 12:02:58] 2025-06-04 16:02:53,406 | INFO     | [monitor] control thread has ended
[2025-06-04 12:02:58] 2025-06-04 16:02:57,897 | INFO     | all workflow threads have been joined
[2025-06-04 12:02:58] 2025-06-04 16:02:57,897 | INFO     | end of generic workflow (traces error code: 0)
[2025-06-04 12:02:58] 2025-06-04 16:02:57,897 | INFO     | traces error code: 0
[2025-06-04 12:02:58] 2025-06-04 16:02:57,898 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-06-04 12:02:58] 2025-06-04 16:02:58,073 [wrapper] ==== pilot stdout END ====
[2025-06-04 12:02:58] 2025-06-04 16:02:58,076 [wrapper] ==== wrapper stdout RESUME ====
[2025-06-04 12:02:58] 2025-06-04 16:02:58,079 [wrapper] pilotpid: 1375794
[2025-06-04 12:02:58] 2025-06-04 16:02:58,081 [wrapper] Pilot exit status: 0
[2025-06-04 12:02:58] 2025-06-04 16:02:58,090 [wrapper] pandaids: 6666850550
[2025-06-04 12:02:58] 2025-06-04 16:02:58,160 [wrapper] cleanup supervisor_pilot 1640873 1375795
[2025-06-04 12:02:58] 2025-06-04 16:02:58,163 [wrapper] Test setup, not cleaning
[2025-06-04 12:02:58] 2025-06-04 16:02:58,166 [wrapper] apfmon messages muted
[2025-06-04 12:02:58] 2025-06-04 16:02:58,168 [wrapper] ==== wrapper stdout END ====
[2025-06-04 12:02:58] 2025-06-04 16:02:58,171 [wrapper] ==== wrapper stderr END ====
[2025-06-04 12:02:58]  *** Error codes and diagnostics ***
[2025-06-04 12:02:58]     "exeErrorCode": 0,
[2025-06-04 12:02:58]     "exeErrorDiag": "",
[2025-06-04 12:02:58]     "pilotErrorCode": 0,
[2025-06-04 12:02:58]     "pilotErrorDiag": "",
[2025-06-04 12:02:58]  *** Listing of results directory ***
[2025-06-04 12:02:58] total 414780
[2025-06-04 12:02:58] -rw-r--r--. 1 boincer umatlas    495897 May 27 04:13 pilot3.tar.gz
[2025-06-04 12:02:58] -rw-r--r--. 1 boincer umatlas      5111 May 27 04:34 queuedata.json
[2025-06-04 12:02:58] -rwx------. 1 boincer umatlas     37140 May 27 04:37 runpilot2-wrapper.sh
[2025-06-04 12:02:58] -rw-r--r--. 1 boincer umatlas       100 Jun  4 10:34 wrapper_26015_x86_64-pc-linux-gnu
[2025-06-04 12:02:58] -rwxr-xr-x. 1 boincer umatlas      7986 Jun  4 10:34 run_atlas
[2025-06-04 12:02:58] -rw-r--r--. 1 boincer umatlas       105 Jun  4 10:34 job.xml
[2025-06-04 12:02:58] -rw-r--r--. 2 boincer umatlas 226320978 Jun  4 10:34 EVNT.44871834._002547.pool.root.1
[2025-06-04 12:02:58] drwxrwx--x. 2 boincer umatlas      4096 Jun  4 10:34 shared
[2025-06-04 12:02:58] -rw-r--r--. 2 boincer umatlas    508877 Jun  4 10:34 input.tar.gz
[2025-06-04 12:02:58] -rw-r--r--. 2 boincer umatlas     15093 Jun  4 10:34 start_atlas.sh
[2025-06-04 12:02:58] -rw-r--r--. 1 boincer umatlas         0 Jun  4 10:34 boinc_lockfile
[2025-06-04 12:02:58] -rw-r--r--. 1 boincer umatlas      2559 Jun  4 10:34 pandaJob.out
[2025-06-04 12:02:58] -rw-------. 1 boincer umatlas    986819 Jun  4 10:34 agis_schedconf.cvmfs.json
[2025-06-04 12:02:58] -rw-------. 1 boincer umatlas   1598969 Jun  4 10:34 agis_ddmendpoints.agis.ALL.json
[2025-06-04 12:02:58] drwx------. 4 boincer umatlas      4096 Jun  4 10:34 pilot3
[2025-06-04 12:02:58] -rw-r--r--. 1 boincer umatlas      6857 Jun  4 12:00 init_data.xml
[2025-06-04 12:02:58] -rw-------. 1 boincer umatlas        95 Jun  4 12:01 pilot_heartbeat.json
[2025-06-04 12:02:58] -rw-------. 1 boincer umatlas 192956386 Jun  4 12:01 HITS.44871837._064630.pool.root.1
[2025-06-04 12:02:58] -rw-r--r--. 1 boincer umatlas       529 Jun  4 12:02 boinc_task_state.xml
[2025-06-04 12:02:58] -rw-------. 1 boincer umatlas      1038 Jun  4 12:02 memory_monitor_summary.json
[2025-06-04 12:02:58] -rw-------. 1 boincer umatlas    306836 Jun  4 12:02 log.44871837._064630.job.log.tgz.1
[2025-06-04 12:02:58] -rw-------. 1 boincer umatlas      7714 Jun  4 12:02 heartbeat.json
[2025-06-04 12:02:58] -rw-r--r--. 1 boincer umatlas        27 Jun  4 12:02 wrapper_checkpoint.txt
[2025-06-04 12:02:58] -rw-r--r--. 1 boincer umatlas      8192 Jun  4 12:02 boinc_mmap_file
[2025-06-04 12:02:58] -rw-------. 1 boincer umatlas      4425 Jun  4 12:02 pilotlog.txt
[2025-06-04 12:02:58] -rw-------. 1 boincer umatlas    507166 Jun  4 12:02 log.44871837._064630.job.log.1
[2025-06-04 12:02:58] -rw-------. 1 boincer umatlas       357 Jun  4 12:02 output.list
[2025-06-04 12:02:58] -rw-r--r--. 1 boincer umatlas       620 Jun  4 12:02 runtime_log
[2025-06-04 12:02:58] -rw-------. 1 boincer umatlas    829440 Jun  4 12:02 result.tar.gz
[2025-06-04 12:02:58] -rw-------. 1 boincer umatlas       652 Jun  4 12:02 uj8MDmMz4d7nsSi4ap6QjLDmwznN0nGgGQJmUXzaDmBxYKDmwhkabn.diag
[2025-06-04 12:02:58] -rw-r--r--. 1 boincer umatlas      8659 Jun  4 12:02 runtime_log.err
[2025-06-04 12:02:58] -rw-r--r--. 1 boincer umatlas     21109 Jun  4 12:02 stderr.txt
[2025-06-04 12:02:58] HITS file was successfully produced:
[2025-06-04 12:02:58] -rw-------. 1 boincer umatlas 192956386 Jun  4 12:01 shared/HITS.pool.root.1
[2025-06-04 12:02:58]  *** Contents of shared directory: ***
[2025-06-04 12:02:58] total 410792
[2025-06-04 12:02:58] -rw-r--r--. 2 boincer umatlas 226320978 Jun  4 10:34 ATLAS.root_0
[2025-06-04 12:02:58] -rw-r--r--. 2 boincer umatlas    508877 Jun  4 10:34 input.tar.gz
[2025-06-04 12:02:58] -rw-r--r--. 2 boincer umatlas     15093 Jun  4 10:34 start_atlas.sh
[2025-06-04 12:02:58] -rw-------. 1 boincer umatlas 192956386 Jun  4 12:01 HITS.pool.root.1
[2025-06-04 12:02:58] -rw-------. 1 boincer umatlas    829440 Jun  4 12:02 result.tar.gz
12:03:00 (1371909): run_atlas exited; CPU time 36190.406002
12:03:00 (1371909): called boinc_finish(0)

</stderr_txt>
]]>

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