Stderr output

<core_client_version>7.20.2</core_client_version>
<![CDATA[
<stderr_txt>
01:14:22 (5068): wrapper (7.7.26015): starting
01:14:22 (5068): wrapper: running run_atlas (--nthreads 8)
[2025-06-05 01:14:22] Arguments: --nthreads 8
[2025-06-05 01:14:22] Threads: 8
[2025-06-05 01:14:22] Checking for CVMFS
[2025-06-05 01:14:24] Probing /cvmfs/atlas.cern.ch... OK
[2025-06-05 01:14:25] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-06-05 01:14:25] Running cvmfs_config stat atlas.cern.ch
[2025-06-05 01:14:26] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-06-05 01:14:26] 2.11.2.0 3973 33996 95704 146797 3 159 15822163 25165824 3632 130560 0 18912808 99.757 22146893 2715 http://s1cern-cvmfs.openhtc.io/cvmfs/atlas.cern.ch http://192.168.73.11:3128/ 1
[2025-06-05 01:14:26] CVMFS is ok
[2025-06-05 01:14:26] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-06-05 01:14:26] Checking for apptainer binary...
[2025-06-05 01:14:26] Using apptainer found in PATH at /usr/bin/apptainer
[2025-06-05 01:14:26] Running /usr/bin/apptainer --version
[2025-06-05 01:14:26] apptainer version 1.3.2-1.el7
[2025-06-05 01:14:26] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-06-05 01:14:38] cg-vwn471.simple-grid.lan
[2025-06-05 01:14:38] apptainer works
[2025-06-05 01:14:38] Set ATHENA_PROC_NUMBER=8
[2025-06-05 01:14:38] Set ATHENA_CORE_NUMBER=8
[2025-06-05 01:14:38] Starting ATLAS job with PandaID=6678364324
[2025-06-05 01:14:38] Running command: /usr/bin/apptainer exec -B /cvmfs,/var/lib/boinc/slots/14 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-06-05 05:22:42]  *** The last 200 lines of the pilot log: ***
[2025-06-05 05:22:42] 2025-06-05 02:47:30,928 | WARNING  | GPU info not found in prmon json: 'gpu'
[2025-06-05 05:22:42] 2025-06-05 02:47:30,929 | WARNING  | format EVNTtoHITS has no such key: dbData
[2025-06-05 05:22:42] 2025-06-05 02:47:30,929 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2025-06-05 05:22:42] 2025-06-05 02:47:30,933 | INFO     | fitting pss+swap vs Time
[2025-06-05 05:22:42] 2025-06-05 02:47:30,934 | INFO     | sum of square deviations: 2750295288.0
[2025-06-05 05:22:42] 2025-06-05 02:47:30,935 | INFO     | sum of deviations: 18228205074.0
[2025-06-05 05:22:42] 2025-06-05 02:47:30,936 | INFO     | mean x: 1749085246.0
[2025-06-05 05:22:42] 2025-06-05 02:47:30,936 | INFO     | mean y: 2471401.2463768115
[2025-06-05 05:22:42] 2025-06-05 02:47:30,936 | INFO     | -- intersect: -11589987304.953371
[2025-06-05 05:22:42] 2025-06-05 02:47:30,936 | INFO     | intersect: -11589987304.953371
[2025-06-05 05:22:42] 2025-06-05 02:47:30,936 | INFO     | chi2: 2.4576055559211905
[2025-06-05 05:22:42] 2025-06-05 02:47:30,937 | INFO     | sum of square deviations: 2555770710.5
[2025-06-05 05:22:42] 2025-06-05 02:47:30,938 | INFO     | sum of deviations: 31210583022.0
[2025-06-05 05:22:42] 2025-06-05 02:47:30,938 | INFO     | mean x: 1749085093.5
[2025-06-05 05:22:42] 2025-06-05 02:47:30,939 | INFO     | mean y: 2481369.7425742573
[2025-06-05 05:22:42] 2025-06-05 02:47:30,939 | INFO     | -- intersect: -21357011208.738632
[2025-06-05 05:22:42] 2025-06-05 02:47:30,939 | INFO     | intersect: -21357011208.738632
[2025-06-05 05:22:42] 2025-06-05 02:47:30,939 | INFO     | chi2: 1.6885737072641072
[2025-06-05 05:22:42] 2025-06-05 02:47:30,939 | INFO     | current chi2=1.6885737072641072 (change=31.291915287391397 %)
[2025-06-05 05:22:42] 2025-06-05 02:47:30,940 | INFO     | sum of square deviations: 2370641658.0
[2025-06-05 05:22:42] 2025-06-05 02:47:30,941 | INFO     | sum of deviations: 30391353815.00002
[2025-06-05 05:22:42] 2025-06-05 02:47:30,941 | INFO     | mean x: 1749084941.0
[2025-06-05 05:22:42] 2025-06-05 02:47:30,941 | INFO     | mean y: 2480694.7868020306
[2025-06-05 05:22:42] 2025-06-05 02:47:30,941 | INFO     | -- intersect: -22420587386.81671
[2025-06-05 05:22:42] 2025-06-05 02:47:30,941 | INFO     | intersect: -22420587386.81671
[2025-06-05 05:22:42] 2025-06-05 02:47:30,942 | INFO     | chi2: 1.6896240327166034
[2025-06-05 05:22:42] 2025-06-05 02:47:30,942 | INFO     | current chi2=1.6896240327166034 (change=-0.06220193101301213 %)
[2025-06-05 05:22:42] 2025-06-05 02:47:30,942 | INFO     | right removable region: 196
[2025-06-05 05:22:42] 2025-06-05 02:47:30,942 | INFO     | sum of square deviations: 2555770710.5
[2025-06-05 05:22:42] 2025-06-05 02:47:30,944 | INFO     | sum of deviations: -18454641191.5
[2025-06-05 05:22:42] 2025-06-05 02:47:30,944 | INFO     | mean x: 1749085398.5
[2025-06-05 05:22:42] 2025-06-05 02:47:30,944 | INFO     | mean y: 2499928.8465346536
[2025-06-05 05:22:42] 2025-06-05 02:47:30,944 | INFO     | -- intersect: 12632249268.252031
[2025-06-05 05:22:42] 2025-06-05 02:47:30,944 | INFO     | intersect: 12632249268.252031
[2025-06-05 05:22:42] 2025-06-05 02:47:30,945 | INFO     | chi2: 0.863273608445633
[2025-06-05 05:22:42] 2025-06-05 02:47:30,945 | INFO     | current chi2=0.863273608445633 (change=64.87338635910392 %)
[2025-06-05 05:22:42] 2025-06-05 02:47:30,945 | INFO     | sum of square deviations: 2370641658.0
[2025-06-05 05:22:42] 2025-06-05 02:47:30,946 | INFO     | sum of deviations: -24202821404.0
[2025-06-05 05:22:42] 2025-06-05 02:47:30,947 | INFO     | mean x: 1749085551.0
[2025-06-05 05:22:42] 2025-06-05 02:47:30,947 | INFO     | mean y: 2504620.111675127
[2025-06-05 05:22:42] 2025-06-05 02:47:30,947 | INFO     | -- intersect: 17859613081.997116
[2025-06-05 05:22:42] 2025-06-05 02:47:30,947 | INFO     | intersect: 17859613081.997116
[2025-06-05 05:22:42] 2025-06-05 02:47:30,947 | INFO     | chi2: 0.810160752969922
[2025-06-05 05:22:42] 2025-06-05 02:47:30,947 | INFO     | current chi2=0.810160752969922 (change=6.1524938276919325 %)
[2025-06-05 05:22:42] 2025-06-05 02:47:30,947 | INFO     | left removable region: 20
[2025-06-05 05:22:42] 2025-06-05 02:47:30,951 | INFO     | sum of square deviations: 1690450300.0
[2025-06-05 05:22:42] 2025-06-05 02:47:30,952 | INFO     | sum of deviations: -9642257068.000002
[2025-06-05 05:22:42] 2025-06-05 02:47:30,956 | INFO     | mean x: 1749085520.5
[2025-06-05 05:22:42] 2025-06-05 02:47:30,956 | INFO     | mean y: 2515299.3181818184
[2025-06-05 05:22:42] 2025-06-05 02:47:30,956 | INFO     | -- intersect: 9979225186.960302
[2025-06-05 05:22:42] 2025-06-05 02:47:30,956 | INFO     | intersect: 9979225186.960302
[2025-06-05 05:22:42] 2025-06-05 02:47:30,957 | INFO     | chi2: 0.017927612057758183
[2025-06-05 05:22:42] 2025-06-05 02:47:30,957 | INFO     | -- intersect: 9979225186.960302
[2025-06-05 05:22:42] 2025-06-05 02:47:30,957 | INFO     | current memory leak: -5.70 B/s (using 176 data points, chi2=0.02)
[2025-06-05 05:22:42] 2025-06-05 02:47:30,958 | INFO     | ..............................
[2025-06-05 05:22:42] 2025-06-05 02:47:30,958 | INFO     | . Timing measurements:
[2025-06-05 05:22:42] 2025-06-05 02:47:30,958 | INFO     | . get job = 0 s
[2025-06-05 05:22:42] 2025-06-05 02:47:30,958 | INFO     | . initial setup = 2 s
[2025-06-05 05:22:42] 2025-06-05 02:47:30,958 | INFO     | . payload setup = 14 s
[2025-06-05 05:22:42] 2025-06-05 02:47:30,958 | INFO     | . stage-in = 0 s
[2025-06-05 05:22:42] 2025-06-05 02:47:30,958 | INFO     | . payload execution = 12605 s
[2025-06-05 05:22:42] 2025-06-05 02:47:30,958 | INFO     | . stage-out = 3 s
[2025-06-05 05:22:42] 2025-06-05 02:47:30,959 | INFO     | . log creation = 1 s
[2025-06-05 05:22:42] 2025-06-05 02:47:30,959 | INFO     | ..............................
[2025-06-05 05:22:42] 2025-06-05 02:47:31,109 | INFO     | 
[2025-06-05 05:22:42] 2025-06-05 02:47:31,109 | INFO     | job summary report
[2025-06-05 05:22:42] 2025-06-05 02:47:31,109 | INFO     | --------------------------------------------------
[2025-06-05 05:22:42] 2025-06-05 02:47:31,109 | INFO     | PanDA job id: 6678364324
[2025-06-05 05:22:42] 2025-06-05 02:47:31,109 | INFO     | task id: 45006595
[2025-06-05 05:22:42] 2025-06-05 02:47:31,109 | INFO     | errors: (none)
[2025-06-05 05:22:42] 2025-06-05 02:47:31,109 | INFO     | status: LOG_TRANSFER = DONE 
[2025-06-05 05:22:42] 2025-06-05 02:47:31,110 | INFO     | pilot state: finished 
[2025-06-05 05:22:42] 2025-06-05 02:47:31,110 | INFO     | transexitcode: 0
[2025-06-05 05:22:42] 2025-06-05 02:47:31,110 | INFO     | exeerrorcode: 0
[2025-06-05 05:22:42] 2025-06-05 02:47:31,110 | INFO     | exeerrordiag: 
[2025-06-05 05:22:42] 2025-06-05 02:47:31,110 | INFO     | exitcode: 0
[2025-06-05 05:22:42] 2025-06-05 02:47:31,110 | INFO     | exitmsg: OK
[2025-06-05 05:22:42] 2025-06-05 02:47:31,110 | INFO     | cpuconsumptiontime: 47560 s
[2025-06-05 05:22:42] 2025-06-05 02:47:31,110 | INFO     | nevents: 400
[2025-06-05 05:22:42] 2025-06-05 02:47:31,110 | INFO     | neventsw: 0
[2025-06-05 05:22:42] 2025-06-05 02:47:31,110 | INFO     | pid: 19594
[2025-06-05 05:22:42] 2025-06-05 02:47:31,110 | INFO     | pgrp: 19594
[2025-06-05 05:22:42] 2025-06-05 02:47:31,110 | INFO     | corecount: 8
[2025-06-05 05:22:42] 2025-06-05 02:47:31,111 | INFO     | event service: False
[2025-06-05 05:22:42] 2025-06-05 02:47:31,111 | INFO     | sizes: {0: 2397172, 1: 2397371, 9: 2397577, 12: 2397605, 12625: 2426873, 12628: 2435816, 12631: 2436000, 12727: 2436170}
[2025-06-05 05:22:42] 2025-06-05 02:47:31,111 | INFO     | --------------------------------------------------
[2025-06-05 05:22:42] 2025-06-05 02:47:31,111 | INFO     | 
[2025-06-05 05:22:42] 2025-06-05 02:47:31,111 | INFO     | executing command: ls -lF /var/lib/boinc/slots/14
[2025-06-05 05:22:42] 2025-06-05 02:47:31,543 | INFO     | PID=9052 has CPU usage=1.7% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i PR -
[2025-06-05 05:22:42] 2025-06-05 02:47:31,543 | INFO     | .. there are 9 such processes running
[2025-06-05 05:22:42] 2025-06-05 02:47:31,669 | INFO     | queue jobs had 0 job(s) [purged]
[2025-06-05 05:22:42] 2025-06-05 02:47:31,669 | INFO     | queue payloads had 0 job(s) [purged]
[2025-06-05 05:22:42] 2025-06-05 02:47:31,670 | INFO     | queue data_in had 0 job(s) [purged]
[2025-06-05 05:22:42] 2025-06-05 02:47:31,670 | INFO     | queue data_out had 0 job(s) [purged]
[2025-06-05 05:22:42] 2025-06-05 02:47:31,670 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-06-05 05:22:42] 2025-06-05 02:47:31,670 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-06-05 05:22:42] 2025-06-05 02:47:31,670 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-06-05 05:22:42] 2025-06-05 02:47:31,670 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-06-05 05:22:42] 2025-06-05 02:47:31,670 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-06-05 05:22:42] 2025-06-05 02:47:31,670 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-06-05 05:22:42] 2025-06-05 02:47:31,670 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-06-05 05:22:42] 2025-06-05 02:47:31,670 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-06-05 05:22:42] 2025-06-05 02:47:31,670 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-06-05 05:22:42] 2025-06-05 02:47:31,671 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-06-05 05:22:42] 2025-06-05 02:47:31,671 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-06-05 05:22:42] 2025-06-05 02:47:31,671 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-06-05 05:22:42] 2025-06-05 02:47:31,671 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-06-05 05:22:42] 2025-06-05 02:47:31,671 | INFO     | queue completed_jobids has 1 job(s)
[2025-06-05 05:22:42] 2025-06-05 02:47:31,671 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-06-05 05:22:42] 2025-06-05 02:47:31,671 | INFO     | queue messages had 0 job(s) [purged]
[2025-06-05 05:22:42] 2025-06-05 02:47:31,671 | INFO     | job 6678364324 has completed (purged errors)
[2025-06-05 05:22:42] 2025-06-05 02:47:31,671 | INFO     | overall cleanup function is called
[2025-06-05 05:22:42] 2025-06-05 02:47:32,681 | INFO     | --- collectZombieJob: --- 10, [19594]
[2025-06-05 05:22:42] 2025-06-05 02:47:32,681 | INFO     | zombie collector waiting for pid 19594
[2025-06-05 05:22:42] 2025-06-05 02:47:32,681 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-06-05 05:22:42] 2025-06-05 02:47:32,681 | INFO     | collected zombie processes
[2025-06-05 05:22:42] 2025-06-05 02:47:32,681 | INFO     | will attempt to kill all subprocesses of pid=19594
[2025-06-05 05:22:42] 2025-06-05 02:47:32,822 | INFO     | process IDs to be killed: [19594] (in reverse order)
[2025-06-05 05:22:42] 2025-06-05 02:47:33,597 | WARNING  | found no corresponding commands to process id(s)
[2025-06-05 05:22:42] 2025-06-05 02:47:33,598 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-06-05 05:22:42] 2025-06-05 02:47:33,601 | INFO     | did not find any defunct processes belonging to 19594
[2025-06-05 05:22:42] 2025-06-05 02:47:33,605 | INFO     | did not find any defunct processes belonging to 19594
[2025-06-05 05:22:42] 2025-06-05 02:47:33,605 | INFO     | ready for new job
[2025-06-05 05:22:42] 2025-06-05 02:47:33,605 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-06-05 05:22:42] 2025-06-05 02:47:33,607 | INFO     | **************************************
[2025-06-05 05:22:42] 2025-06-05 02:47:33,608 | INFO     | ***  PanDA Pilot version 3.10.2.2  ***
[2025-06-05 05:22:42] 2025-06-05 02:47:33,608 | INFO     | **************************************
[2025-06-05 05:22:42] 2025-06-05 02:47:33,608 | INFO     | 
[2025-06-05 05:22:42] 2025-06-05 02:47:33,608 | INFO     | pilot is running in a VM
[2025-06-05 05:22:42] 2025-06-05 02:47:33,608 | INFO     | architecture information:
[2025-06-05 05:22:42] 2025-06-05 02:47:33,619 | INFO     | executing command: cat /etc/os-release
[2025-06-05 05:22:42] 2025-06-05 02:47:33,871 | INFO     | cat /etc/os-release:
[2025-06-05 05:22:42] NAME="CentOS Linux"
[2025-06-05 05:22:42] VERSION="7 (Core)"
[2025-06-05 05:22:42] ID="centos"
[2025-06-05 05:22:42] ID_LIKE="rhel fedora"
[2025-06-05 05:22:42] VERSION_ID="7"
[2025-06-05 05:22:42] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-06-05 05:22:42] ANSI_COLOR="0;31"
[2025-06-05 05:22:42] CPE_NAME="cpe:/o:centos:centos:7"
[2025-06-05 05:22:42] HOME_URL="https://www.centos.org/"
[2025-06-05 05:22:42] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-06-05 05:22:42] 
[2025-06-05 05:22:42] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-06-05 05:22:42] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-06-05 05:22:42] REDHAT_SUPPORT_PRODUCT="centos"
[2025-06-05 05:22:42] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-06-05 05:22:42] 
[2025-06-05 05:22:42] 2025-06-05 02:47:33,871 | INFO     | **************************************
[2025-06-05 05:22:42] 2025-06-05 02:47:34,375 | INFO     | executing command: df -mP /var/lib/boinc/slots/14
[2025-06-05 05:22:42] 2025-06-05 02:47:34,548 | INFO     | sufficient remaining disk space (496751345664 B)
[2025-06-05 05:22:42] 2025-06-05 02:47:34,549 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-06-05 05:22:42] 2025-06-05 02:47:34,549 | INFO     | current server update state: UPDATING_FINAL
[2025-06-05 05:22:42] 2025-06-05 02:47:34,549 | INFO     | update_server=False
[2025-06-05 05:22:42] 2025-06-05 02:47:34,549 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-06-05 05:22:42] 2025-06-05 02:47:34,552 | WARNING  | aborting monitor loop since graceful_stop has been set (timing out remaining threads)
[2025-06-05 05:22:42] 2025-06-05 02:47:34,552 | INFO     | found 0 job(s) in 20 queues
[2025-06-05 05:22:42] 2025-06-05 02:47:34,552 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-06-05 05:22:42] 2025-06-05 02:47:34,552 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-06-05 05:22:42] 2025-06-05 02:47:34,560 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-06-05 05:22:42] 2025-06-05 02:47:34,560 | INFO     | aborting loop
[2025-06-05 05:22:42] 2025-06-05 02:47:34,846 | INFO     | all data control threads have been joined
[2025-06-05 05:22:42] 2025-06-05 02:47:35,347 | INFO     | all payload control threads have been joined
[2025-06-05 05:22:42] 2025-06-05 02:47:35,555 | INFO     | [job] retrieve thread has finished
[2025-06-05 05:22:42] 2025-06-05 02:47:35,565 | INFO     | [job] job monitor thread has finished
[2025-06-05 05:22:42] 2025-06-05 02:47:35,817 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-06-05 05:22:42] 2025-06-05 02:47:35,852 | INFO     | [data] control thread has finished
[2025-06-05 05:22:42] 2025-06-05 02:47:35,989 | INFO     | [job] create_data_payload thread has finished
[2025-06-05 05:22:42] 2025-06-05 02:47:36,039 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-06-05 05:22:42] 2025-06-05 02:47:36,123 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-06-05 05:22:42] 2025-06-05 02:47:36,185 | INFO     | [payload] failed_post thread has finished
[2025-06-05 05:22:42] 2025-06-05 02:47:36,189 | INFO     | [payload] validate_post thread has finished
[2025-06-05 05:22:42] 2025-06-05 02:47:36,230 | INFO     | all job control threads have been joined
[2025-06-05 05:22:42] 2025-06-05 02:47:36,353 | INFO     | [payload] control thread has finished
[2025-06-05 05:22:42] 2025-06-05 02:47:36,771 | INFO     | [data] copytool_in thread has finished
[2025-06-05 05:22:42] 2025-06-05 02:47:36,806 | INFO     | [payload] execute_payloads thread has finished
[2025-06-05 05:22:42] 2025-06-05 02:47:36,875 | INFO     | [job] validate thread has finished
[2025-06-05 05:22:42] 2025-06-05 02:47:36,911 | INFO     | [payload] validate_pre thread has finished
[2025-06-05 05:22:42] 2025-06-05 02:47:37,056 | INFO     | [payload] run_realtimelog thread has finished
[2025-06-05 05:22:42] 2025-06-05 02:47:37,129 | INFO     | [job] queue monitor thread has finished
[2025-06-05 05:22:42] 2025-06-05 02:47:37,236 | INFO     | [job] control thread has finished
[2025-06-05 05:22:42] 2025-06-05 02:47:37,824 | INFO     | [data] copytool_out thread has finished
[2025-06-05 05:22:42] 2025-06-05 02:47:40,078 | INFO     | [data] queue_monitor thread has finished
[2025-06-05 05:22:42] 2025-06-05 02:47:42,097 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140263412291392)>', '<ExcThread(monitor, started 140263112546048)>']
[2025-06-05 05:22:42] 2025-06-05 02:47:42,602 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-06-05 05:22:42] 2025-06-05 02:47:42,602 | INFO     | [monitor] control thread has ended
[2025-06-05 05:22:42] 2025-06-05 02:47:47,123 | INFO     | all workflow threads have been joined
[2025-06-05 05:22:42] 2025-06-05 02:47:47,123 | INFO     | end of generic workflow (traces error code: 0)
[2025-06-05 05:22:42] 2025-06-05 02:47:47,123 | INFO     | traces error code: 0
[2025-06-05 05:22:42] 2025-06-05 02:47:47,124 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-06-05 05:22:42] 2025-06-05 02:47:47,427 [wrapper] ==== pilot stdout END ====
[2025-06-05 05:22:42] 2025-06-05 02:47:47,444 [wrapper] ==== wrapper stdout RESUME ====
[2025-06-05 05:22:42] 2025-06-05 02:47:47,528 [wrapper] pilotpid: 9052
[2025-06-05 05:22:42] 2025-06-05 02:47:47,634 [wrapper] Pilot exit status: 0
[2025-06-05 05:22:42] 2025-06-05 02:47:47,981 [wrapper] pandaids: 6678364324
[2025-06-05 05:22:42] 2025-06-05 02:47:48,704 [wrapper] cleanup supervisor_pilot  9136 9053
[2025-06-05 05:22:42] 2025-06-05 02:47:48,742 [wrapper] Test setup, not cleaning
[2025-06-05 05:22:42] 2025-06-05 02:47:48,760 [wrapper] apfmon messages muted
[2025-06-05 05:22:42] 2025-06-05 02:47:48,774 [wrapper] ==== wrapper stdout END ====
[2025-06-05 05:22:42] 2025-06-05 02:47:48,805 [wrapper] ==== wrapper stderr END ====
[2025-06-05 05:22:42]  *** Error codes and diagnostics ***
[2025-06-05 05:22:42]     "exeErrorCode": 0,
[2025-06-05 05:22:42]     "exeErrorDiag": "",
[2025-06-05 05:22:42]     "pilotErrorCode": 0,
[2025-06-05 05:22:42]     "pilotErrorDiag": "",
[2025-06-05 05:22:42]  *** Listing of results directory ***
[2025-06-05 05:22:42] total 396860
[2025-06-05 05:22:42] -rw-r--r--. 1 boinc boinc    495897 Jun  4 07:59 pilot3.tar.gz
[2025-06-05 05:22:42] -rwx------. 1 boinc boinc     37140 Jun  4 08:14 runpilot2-wrapper.sh
[2025-06-05 05:22:42] -rw-r--r--. 1 boinc boinc      5111 Jun  4 08:14 queuedata.json
[2025-06-05 05:22:42] -rw-r--r--. 1 boinc boinc       100 Jun  5 01:14 wrapper_26015_x86_64-pc-linux-gnu
[2025-06-05 05:22:42] -rwxr-xr-x. 1 boinc boinc      7986 Jun  5 01:14 run_atlas
[2025-06-05 05:22:42] -rw-r--r--. 1 boinc boinc       105 Jun  5 01:14 job.xml
[2025-06-05 05:22:42] -rw-r--r--. 2 boinc boinc 215481643 Jun  5 01:14 EVNT.45006593._002154.pool.root.1
[2025-06-05 05:22:42] -rw-r--r--. 1 boinc boinc      6393 Jun  5 01:14 init_data.xml
[2025-06-05 05:22:42] -rw-r--r--. 2 boinc boinc     15093 Jun  5 01:14 start_atlas.sh
[2025-06-05 05:22:42] drwxrwx--x. 2 boinc boinc        68 Jun  5 01:14 shared
[2025-06-05 05:22:42] -rw-r--r--. 2 boinc boinc    508882 Jun  5 01:14 input.tar.gz
[2025-06-05 05:22:42] -rw-r--r--. 1 boinc boinc         0 Jun  5 01:14 boinc_lockfile
[2025-06-05 05:22:42] -rw-r--r--. 1 boinc boinc      2525 Jun  5 01:14 pandaJob.out
[2025-06-05 05:22:42] -rw-------. 1 boinc boinc    987032 Jun  5 01:14 agis_schedconf.cvmfs.json
[2025-06-05 05:22:42] drwx------. 4 boinc boinc      4096 Jun  5 01:14 pilot3
[2025-06-05 05:22:42] -rw-------. 1 boinc boinc 184107271 Jun  5 04:44 HITS.45006595._053824.pool.root.1
[2025-06-05 05:22:42] -rw-r--r--. 1 boinc boinc       531 Jun  5 04:44 boinc_task_state.xml
[2025-06-05 05:22:42] -rw-------. 1 boinc boinc      1016 Jun  5 04:45 memory_monitor_summary.json
[2025-06-05 05:22:42] -rw-------. 1 boinc boinc   1598969 Jun  5 04:45 agis_ddmendpoints.agis.ALL.json
[2025-06-05 05:22:42] -rw-------. 1 boinc boinc    377879 Jun  5 04:45 log.45006595._053824.job.log.tgz.1
[2025-06-05 05:22:42] -rw-------. 1 boinc boinc        95 Jun  5 04:47 pilot_heartbeat.json
[2025-06-05 05:22:42] -rw-------. 1 boinc boinc      7690 Jun  5 04:47 heartbeat.json
[2025-06-05 05:22:42] -rw-------. 1 boinc boinc      4540 Jun  5 04:47 pilotlog.txt
[2025-06-05 05:22:42] -rw-------. 1 boinc boinc   1111485 Jun  5 04:47 log.45006595._053824.job.log.1
[2025-06-05 05:22:42] -rw-------. 1 boinc boinc       357 Jun  5 04:47 output.list
[2025-06-05 05:22:42] -rw-r--r--. 1 boinc boinc       620 Jun  5 04:47 runtime_log
[2025-06-05 05:22:42] -rw-------. 1 boinc boinc   1505280 Jun  5 04:47 result.tar.gz
[2025-06-05 05:22:42] -rw-r--r--. 1 boinc boinc      8673 Jun  5 04:47 runtime_log.err
[2025-06-05 05:22:42] -rw-------. 1 boinc boinc       657 Jun  5 04:47 EnHLDmyZwg7nsSi4ap6QjLDmwznN0nGgGQJmUXzaDmQRnKDmMjrAzn.diag
[2025-06-05 05:22:42] -rw-r--r--. 1 boinc boinc      8192 Jun  5 05:22 boinc_mmap_file
[2025-06-05 05:22:42] -rw-r--r--. 1 boinc boinc        28 Jun  5 05:22 wrapper_checkpoint.txt
[2025-06-05 05:22:42] -rw-r--r--. 1 boinc boinc     20580 Jun  5 05:22 stderr.txt
[2025-06-05 05:22:42] HITS file was successfully produced:
[2025-06-05 05:22:42] -rw-------. 1 boinc boinc 184107271 Jun  5 04:44 shared/HITS.pool.root.1
[2025-06-05 05:22:42]  *** Contents of shared directory: ***
[2025-06-05 05:22:42] total 392216
[2025-06-05 05:22:42] -rw-r--r--. 2 boinc boinc 215481643 Jun  5 01:14 ATLAS.root_0
[2025-06-05 05:22:42] -rw-r--r--. 2 boinc boinc     15093 Jun  5 01:14 start_atlas.sh
[2025-06-05 05:22:42] -rw-r--r--. 2 boinc boinc    508882 Jun  5 01:14 input.tar.gz
[2025-06-05 05:22:42] -rw-------. 1 boinc boinc 184107271 Jun  5 04:44 HITS.pool.root.1
[2025-06-05 05:22:42] -rw-------. 1 boinc boinc   1505280 Jun  5 04:47 result.tar.gz
05:22:44 (5068): run_atlas exited; CPU time 47711.847700
05:22:44 (5068): called boinc_finish(0)

</stderr_txt>
]]>

©2025 CERN