Stderr output

<core_client_version>7.7.0</core_client_version>
<![CDATA[
<stderr_txt>
10:29:16 (279412): wrapper (7.7.26015): starting
10:29:16 (279412): wrapper: running run_atlas (--nthreads 9)
[2025-06-04 10:29:16] Arguments: --nthreads 9
[2025-06-04 10:29:16] Threads: 9
[2025-06-04 10:29:16] Checking for CVMFS
[2025-06-04 10:29:17] Probing /cvmfs/atlas.cern.ch... OK
[2025-06-04 10:29:17] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-06-04 10:29:17] Running cvmfs_config stat atlas.cern.ch
[2025-06-04 10:29:17] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-06-04 10:29:17] 2.11.2.0 6489 28904 269596 146781 0 230 15734113 18432000 5592 130560 1 67468265 99.425 81234011 29374 http://cvmfs-s1fnal.opensciencegrid.org:8000/cvmfs/atlas.cern.ch http://192.41.237.109:6081 1
[2025-06-04 10:29:17] CVMFS is ok
[2025-06-04 10:29:17] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-06-04 10:29:17] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2025-06-04 10:29:17] Further information can be found at the LHC@home message board.
[2025-06-04 10:29:17] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-06-04 10:29:17] Checking for apptainer binary...
[2025-06-04 10:29:17] Using apptainer found in PATH at /usr/bin/apptainer
[2025-06-04 10:29:17] Running /usr/bin/apptainer --version
[2025-06-04 10:29:17] apptainer version 1.3.2-1.el7
[2025-06-04 10:29:17] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-06-04 10:29:18] c-210-31-2.aglt2.org
[2025-06-04 10:29:18] apptainer works
[2025-06-04 10:29:18] Set ATHENA_PROC_NUMBER=9
[2025-06-04 10:29:18] Set ATHENA_CORE_NUMBER=9
[2025-06-04 10:29:18] Starting ATLAS job with PandaID=6678392177
[2025-06-04 10:29:18] Running command: /usr/bin/apptainer exec -B /cvmfs,/tmp/boinchome/slots/0 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-06-04 11:25:43]  *** The last 200 lines of the pilot log: ***
[2025-06-04 11:25:43]  is_altstaged=None
[2025-06-04 11:25:43]  is_tar=False
[2025-06-04 11:25:43]  lfn=log.45006595._055206.job.log.tgz.1
[2025-06-04 11:25:43]  mtime=0
[2025-06-04 11:25:43]  protocol_id=None
[2025-06-04 11:25:43]  protocols=[{'endpoint': 'davs://dav.ndgf.org:443', 'flavour': 'WEBDAV', 'id': 331, 'path': '/atlas/disk/atlasdatadisk/rucio/'}]
[2025-06-04 11:25:43]  replicas=None
[2025-06-04 11:25:43]  scope=mc23_13p6TeV
[2025-06-04 11:25:43]  status=None
[2025-06-04 11:25:43]  status_code=0
[2025-06-04 11:25:43]  storage_token=
[2025-06-04 11:25:43]  surl=/tmp/boinchome/slots/0/PanDA_Pilot-6678392177/log.45006595._055206.job.log.tgz.1
[2025-06-04 11:25:43]  turl=davs://dav.ndgf.org:443/atlas/disk/atlasdatadisk/rucio/mc23_13p6TeV/fc/a7/log.45006595._055206.job.log.tgz.1
[2025-06-04 11:25:43]  workdir=None
[2025-06-04 11:25:43] ]
[2025-06-04 11:25:43] 2025-06-04 15:25:16,259 | INFO     | transferring file log.45006595._055206.job.log.tgz.1 from /tmp/boinchome/slots/0/PanDA_Pilot-6678392177/log.45006595._055206.job.log.tgz.1 to /tmp/boinchome/slots/
[2025-06-04 11:25:43] 2025-06-04 15:25:16,259 | INFO     | executing command: /usr/bin/env mv /tmp/boinchome/slots/0/PanDA_Pilot-6678392177/log.45006595._055206.job.log.tgz.1 /tmp/boinchome/slots/0/log.45006595._055206.job
[2025-06-04 11:25:43] 2025-06-04 15:25:16,282 | INFO     | adding to output.list: log.45006595._055206.job.log.tgz.1 davs://dav.ndgf.org:443/atlas/disk/atlasdatadisk/rucio/mc23_13p6TeV/fc/a7/log.45006595._055206.job.log.tg
[2025-06-04 11:25:43] 2025-06-04 15:25:16,283 | INFO     | alt stage-out settings: ['pl', 'write_lan', 'w', 'default'], allow_altstageout=False, remain_files=0, has_altstorage=True
[2025-06-04 11:25:43] 2025-06-04 15:25:16,283 | INFO     | summary of transferred files:
[2025-06-04 11:25:43] 2025-06-04 15:25:16,283 | INFO     |  -- lfn=log.45006595._055206.job.log.tgz.1, status_code=0, status=transferred
[2025-06-04 11:25:43] 2025-06-04 15:25:16,284 | INFO     | stage-out finished correctly
[2025-06-04 11:25:43] 2025-06-04 15:25:18,736 | INFO     | finished stage-out for finished payload, adding job to finished_jobs queue
[2025-06-04 11:25:43] 2025-06-04 15:25:18,826 | INFO     | job 6678392177 has state=finished
[2025-06-04 11:25:43] 2025-06-04 15:25:18,826 | INFO     | preparing for final server update for job 6678392177 in state='finished'
[2025-06-04 11:25:43] 2025-06-04 15:25:18,827 | INFO     | this job has now completed (state=finished)
[2025-06-04 11:25:43] 2025-06-04 15:25:18,827 | INFO     | pilot will not update the server (heartbeat message will be written to file)
[2025-06-04 11:25:43] 2025-06-04 15:25:18,827 | INFO     | log transfer has been attempted: DONE
[2025-06-04 11:25:43] 2025-06-04 15:25:18,827 | INFO     | job 6678392177 has finished - writing final server update
[2025-06-04 11:25:43] 2025-06-04 15:25:18,828 | INFO     | total number of processed events: 400 (read)
[2025-06-04 11:25:43] 2025-06-04 15:25:18,831 | INFO     | executing command: lscpu
[2025-06-04 11:25:43] 2025-06-04 15:25:18,877 | INFO     | executing command: export ATLAS_LOCAL_ROOT_BASE=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase;source ${ATLAS_LOCAL_ROOT_BASE}/user/atlasLocalSetup.sh --quiet;lsetup
[2025-06-04 11:25:43] 2025-06-04 15:25:19,173 | WARNING  | process 3076 can no longer be monitored (due to stat problems) - aborting
[2025-06-04 11:25:43] 2025-06-04 15:25:19,174 | INFO     | using path: /tmp/boinchome/slots/0/PanDA_Pilot-6678392177/memory_monitor_summary.json (trf name=prmon)
[2025-06-04 11:25:43] 2025-06-04 15:25:19,297 | INFO     | number of running child processes to parent process 3076: 1
[2025-06-04 11:25:43] 2025-06-04 15:25:19,297 | INFO     | maximum number of monitored processes: 6
[2025-06-04 11:25:43] 2025-06-04 15:25:21,800 | INFO     | monitor loop #255: job 0:6678392177 is in state 'finished'
[2025-06-04 11:25:43] 2025-06-04 15:25:21,800 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-06-04 11:25:43] 2025-06-04 15:25:24,303 | INFO     | monitor loop #256: job 0:6678392177 is in state 'finished'
[2025-06-04 11:25:43] 2025-06-04 15:25:24,303 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-06-04 11:25:43] 2025-06-04 15:25:24,987 | INFO     | CPU arch script returned: x86-64-v4
[2025-06-04 11:25:43] 2025-06-04 15:25:24,987 | INFO     | using path: /tmp/boinchome/slots/0/PanDA_Pilot-6678392177/memory_monitor_summary.json (trf name=prmon)
[2025-06-04 11:25:43] 2025-06-04 15:25:24,987 | INFO     | extracted standard info from prmon json
[2025-06-04 11:25:43] 2025-06-04 15:25:24,988 | INFO     | extracted standard memory fields from prmon json
[2025-06-04 11:25:43] 2025-06-04 15:25:24,988 | WARNING  | GPU info not found in prmon json: 'gpu'
[2025-06-04 11:25:43] 2025-06-04 15:25:24,988 | WARNING  | format EVNTtoHITS has no such key: dbData
[2025-06-04 11:25:43] 2025-06-04 15:25:24,988 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2025-06-04 11:25:43] 2025-06-04 15:25:24,989 | INFO     | fitting pss+swap vs Time
[2025-06-04 11:25:43] 2025-06-04 15:25:24,989 | INFO     | sum of square deviations: 34277852.0
[2025-06-04 11:25:43] 2025-06-04 15:25:24,989 | INFO     | sum of deviations: 222136746.0
[2025-06-04 11:25:43] 2025-06-04 15:25:24,989 | INFO     | mean x: 1749049140.5
[2025-06-04 11:25:43] 2025-06-04 15:25:24,989 | INFO     | mean y: 2523103.875
[2025-06-04 11:25:43] 2025-06-04 15:25:24,989 | INFO     | -- intersect: -11332145260.5478
[2025-06-04 11:25:43] 2025-06-04 15:25:24,989 | INFO     | intersect: -11332145260.5478
[2025-06-04 11:25:43] 2025-06-04 15:25:24,989 | INFO     | chi2: 0.0010962618401791585
[2025-06-04 11:25:43] 2025-06-04 15:25:24,989 | INFO     | -- intersect: -11332145260.5478
[2025-06-04 11:25:43] 2025-06-04 15:25:24,989 | INFO     | current memory leak: 6.48 B/s (using 48 data points, chi2=0.00)
[2025-06-04 11:25:43] 2025-06-04 15:25:24,990 | INFO     | ..............................
[2025-06-04 11:25:43] 2025-06-04 15:25:24,990 | INFO     | . Timing measurements:
[2025-06-04 11:25:43] 2025-06-04 15:25:24,990 | INFO     | . get job = 0 s
[2025-06-04 11:25:43] 2025-06-04 15:25:24,990 | INFO     | . initial setup = 2 s
[2025-06-04 11:25:43] 2025-06-04 15:25:24,990 | INFO     | . payload setup = 9 s
[2025-06-04 11:25:43] 2025-06-04 15:25:24,990 | INFO     | . stage-in = 0 s
[2025-06-04 11:25:43] 2025-06-04 15:25:24,990 | INFO     | . payload execution = 3316 s
[2025-06-04 11:25:43] 2025-06-04 15:25:24,990 | INFO     | . stage-out = 0 s
[2025-06-04 11:25:43] 2025-06-04 15:25:24,990 | INFO     | . log creation = 0 s
[2025-06-04 11:25:43] 2025-06-04 15:25:24,990 | INFO     | ..............................
[2025-06-04 11:25:43] 2025-06-04 15:25:25,037 | INFO     | 
[2025-06-04 11:25:43] 2025-06-04 15:25:25,038 | INFO     | job summary report
[2025-06-04 11:25:43] 2025-06-04 15:25:25,038 | INFO     | --------------------------------------------------
[2025-06-04 11:25:43] 2025-06-04 15:25:25,038 | INFO     | PanDA job id: 6678392177
[2025-06-04 11:25:43] 2025-06-04 15:25:25,038 | INFO     | task id: 45006595
[2025-06-04 11:25:43] 2025-06-04 15:25:25,038 | INFO     | errors: (none)
[2025-06-04 11:25:43] 2025-06-04 15:25:25,038 | INFO     | status: LOG_TRANSFER = DONE 
[2025-06-04 11:25:43] 2025-06-04 15:25:25,038 | INFO     | pilot state: finished 
[2025-06-04 11:25:43] 2025-06-04 15:25:25,038 | INFO     | transexitcode: 0
[2025-06-04 11:25:43] 2025-06-04 15:25:25,038 | INFO     | exeerrorcode: 0
[2025-06-04 11:25:43] 2025-06-04 15:25:25,038 | INFO     | exeerrordiag: 
[2025-06-04 11:25:43] 2025-06-04 15:25:25,038 | INFO     | exitcode: 0
[2025-06-04 11:25:43] 2025-06-04 15:25:25,038 | INFO     | exitmsg: OK
[2025-06-04 11:25:43] 2025-06-04 15:25:25,039 | INFO     | cpuconsumptiontime: 26942 s
[2025-06-04 11:25:43] 2025-06-04 15:25:25,039 | INFO     | nevents: 400
[2025-06-04 11:25:43] 2025-06-04 15:25:25,039 | INFO     | neventsw: 0
[2025-06-04 11:25:43] 2025-06-04 15:25:25,039 | INFO     | pid: 3076
[2025-06-04 11:25:43] 2025-06-04 15:25:25,039 | INFO     | pgrp: 3076
[2025-06-04 11:25:43] 2025-06-04 15:25:25,039 | INFO     | corecount: 9
[2025-06-04 11:25:43] 2025-06-04 15:25:25,039 | INFO     | event service: False
[2025-06-04 11:25:43] 2025-06-04 15:25:25,039 | INFO     | sizes: {0: 2396513, 1: 2397369, 7: 2397575, 12: 2397603, 3329: 2432020, 3332: 2432020, 3338: 2432318}
[2025-06-04 11:25:43] 2025-06-04 15:25:25,039 | INFO     | --------------------------------------------------
[2025-06-04 11:25:43] 2025-06-04 15:25:25,039 | INFO     | 
[2025-06-04 11:25:43] 2025-06-04 15:25:25,039 | INFO     | executing command: ls -lF /tmp/boinchome/slots/0
[2025-06-04 11:25:43] 2025-06-04 15:25:25,062 | INFO     | queue jobs had 0 job(s) [purged]
[2025-06-04 11:25:43] 2025-06-04 15:25:25,062 | INFO     | queue payloads had 0 job(s) [purged]
[2025-06-04 11:25:43] 2025-06-04 15:25:25,062 | INFO     | queue data_in had 0 job(s) [purged]
[2025-06-04 11:25:43] 2025-06-04 15:25:25,062 | INFO     | queue data_out had 0 job(s) [purged]
[2025-06-04 11:25:43] 2025-06-04 15:25:25,062 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-06-04 11:25:43] 2025-06-04 15:25:25,063 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-06-04 11:25:43] 2025-06-04 15:25:25,063 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-06-04 11:25:43] 2025-06-04 15:25:25,063 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-06-04 11:25:43] 2025-06-04 15:25:25,063 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-06-04 11:25:43] 2025-06-04 15:25:25,063 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-06-04 11:25:43] 2025-06-04 15:25:25,063 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-06-04 11:25:43] 2025-06-04 15:25:25,063 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-06-04 11:25:43] 2025-06-04 15:25:25,063 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-06-04 11:25:43] 2025-06-04 15:25:25,063 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-06-04 11:25:43] 2025-06-04 15:25:25,063 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-06-04 11:25:43] 2025-06-04 15:25:25,063 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-06-04 11:25:43] 2025-06-04 15:25:25,063 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-06-04 11:25:43] 2025-06-04 15:25:25,063 | INFO     | queue completed_jobids has 1 job(s)
[2025-06-04 11:25:43] 2025-06-04 15:25:25,063 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-06-04 11:25:43] 2025-06-04 15:25:25,063 | INFO     | queue messages had 0 job(s) [purged]
[2025-06-04 11:25:43] 2025-06-04 15:25:25,063 | INFO     | job 6678392177 has completed (purged errors)
[2025-06-04 11:25:43] 2025-06-04 15:25:25,063 | INFO     | overall cleanup function is called
[2025-06-04 11:25:43] 2025-06-04 15:25:26,070 | INFO     | --- collectZombieJob: --- 10, [3076]
[2025-06-04 11:25:43] 2025-06-04 15:25:26,071 | INFO     | zombie collector waiting for pid 3076
[2025-06-04 11:25:43] 2025-06-04 15:25:26,071 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-06-04 11:25:43] 2025-06-04 15:25:26,071 | INFO     | collected zombie processes
[2025-06-04 11:25:43] 2025-06-04 15:25:26,071 | INFO     | will attempt to kill all subprocesses of pid=3076
[2025-06-04 11:25:43] 2025-06-04 15:25:26,207 | INFO     | process IDs to be killed: [3076] (in reverse order)
[2025-06-04 11:25:43] 2025-06-04 15:25:26,286 | WARNING  | found no corresponding commands to process id(s)
[2025-06-04 11:25:43] 2025-06-04 15:25:26,287 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-06-04 11:25:43] 2025-06-04 15:25:26,293 | INFO     | did not find any defunct processes belonging to 3076
[2025-06-04 11:25:43] 2025-06-04 15:25:26,299 | INFO     | did not find any defunct processes belonging to 3076
[2025-06-04 11:25:43] 2025-06-04 15:25:26,299 | INFO     | ready for new job
[2025-06-04 11:25:43] 2025-06-04 15:25:26,299 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-06-04 11:25:43] 2025-06-04 15:25:26,301 | INFO     | **************************************
[2025-06-04 11:25:43] 2025-06-04 15:25:26,301 | INFO     | ***  PanDA Pilot version 3.10.2.2  ***
[2025-06-04 11:25:43] 2025-06-04 15:25:26,301 | INFO     | **************************************
[2025-06-04 11:25:43] 2025-06-04 15:25:26,301 | INFO     | 
[2025-06-04 11:25:43] 2025-06-04 15:25:26,304 | INFO     | architecture information:
[2025-06-04 11:25:43] 2025-06-04 15:25:26,304 | INFO     | executing command: cat /etc/os-release
[2025-06-04 11:25:43] 2025-06-04 15:25:26,322 | INFO     | cat /etc/os-release:
[2025-06-04 11:25:43] NAME="CentOS Linux"
[2025-06-04 11:25:43] VERSION="7 (Core)"
[2025-06-04 11:25:43] ID="centos"
[2025-06-04 11:25:43] ID_LIKE="rhel fedora"
[2025-06-04 11:25:43] VERSION_ID="7"
[2025-06-04 11:25:43] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-06-04 11:25:43] ANSI_COLOR="0;31"
[2025-06-04 11:25:43] CPE_NAME="cpe:/o:centos:centos:7"
[2025-06-04 11:25:43] HOME_URL="https://www.centos.org/"
[2025-06-04 11:25:43] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-06-04 11:25:43] 
[2025-06-04 11:25:43] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-06-04 11:25:43] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-06-04 11:25:43] REDHAT_SUPPORT_PRODUCT="centos"
[2025-06-04 11:25:43] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-06-04 11:25:43] 
[2025-06-04 11:25:43] 2025-06-04 15:25:26,323 | INFO     | **************************************
[2025-06-04 11:25:43] 2025-06-04 15:25:26,826 | INFO     | executing command: df -mP /tmp/boinchome/slots/0
[2025-06-04 11:25:43] 2025-06-04 15:25:26,908 | INFO     | sufficient remaining disk space (56288608256 B)
[2025-06-04 11:25:43] 2025-06-04 15:25:26,909 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-06-04 11:25:43] 2025-06-04 15:25:26,909 | INFO     | current server update state: UPDATING_FINAL
[2025-06-04 11:25:43] 2025-06-04 15:25:26,909 | INFO     | update_server=False
[2025-06-04 11:25:43] 2025-06-04 15:25:26,909 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-06-04 11:25:43] 2025-06-04 15:25:26,909 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-06-04 11:25:43] 2025-06-04 15:25:26,910 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-06-04 11:25:43] 2025-06-04 15:25:27,208 | INFO     | all data control threads have been joined
[2025-06-04 11:25:43] 2025-06-04 15:25:27,596 | INFO     | found 0 job(s) in 20 queues
[2025-06-04 11:25:43] 2025-06-04 15:25:27,596 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-06-04 11:25:43] 2025-06-04 15:25:27,597 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-06-04 11:25:43] 2025-06-04 15:25:27,811 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-06-04 11:25:43] 2025-06-04 15:25:27,812 | INFO     | aborting loop
[2025-06-04 11:25:43] 2025-06-04 15:25:27,827 | INFO     | all job control threads have been joined
[2025-06-04 11:25:43] 2025-06-04 15:25:27,915 | INFO     | [job] retrieve thread has finished
[2025-06-04 11:25:43] 2025-06-04 15:25:27,915 | INFO     | [job] queue monitor thread has finished
[2025-06-04 11:25:43] 2025-06-04 15:25:28,213 | INFO     | [data] control thread has finished
[2025-06-04 11:25:43] 2025-06-04 15:25:28,313 | INFO     | all payload control threads have been joined
[2025-06-04 11:25:43] 2025-06-04 15:25:28,565 | INFO     | [payload] execute_payloads thread has finished
[2025-06-04 11:25:43] 2025-06-04 15:25:28,663 | INFO     | [payload] failed_post thread has finished
[2025-06-04 11:25:43] 2025-06-04 15:25:28,817 | INFO     | [job] job monitor thread has finished
[2025-06-04 11:25:43] 2025-06-04 15:25:28,822 | INFO     | [job] validate thread has finished
[2025-06-04 11:25:43] 2025-06-04 15:25:28,833 | INFO     | [job] control thread has finished
[2025-06-04 11:25:43] 2025-06-04 15:25:28,915 | INFO     | [data] copytool_out thread has finished
[2025-06-04 11:25:43] 2025-06-04 15:25:28,963 | INFO     | [job] create_data_payload thread has finished
[2025-06-04 11:25:43] 2025-06-04 15:25:29,284 | INFO     | [data] copytool_in thread has finished
[2025-06-04 11:25:43] 2025-06-04 15:25:29,319 | INFO     | [payload] control thread has finished
[2025-06-04 11:25:43] 2025-06-04 15:25:29,338 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-06-04 11:25:43] 2025-06-04 15:25:29,401 | INFO     | [payload] validate_pre thread has finished
[2025-06-04 11:25:43] 2025-06-04 15:25:29,451 | INFO     | [payload] validate_post thread has finished
[2025-06-04 11:25:43] 2025-06-04 15:25:33,344 | INFO     | [data] queue_monitor thread has finished
[2025-06-04 11:25:43] 2025-06-04 15:25:37,536 | INFO     | job.realtimelogging is not enabled
[2025-06-04 11:25:43] 2025-06-04 15:25:38,541 | INFO     | [payload] run_realtimelog thread has finished
[2025-06-04 11:25:43] 2025-06-04 15:25:38,589 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140701517690688)>', '<ExcThread(monitor, started 140701207602944)>']
[2025-06-04 11:25:43] 2025-06-04 15:25:38,639 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-06-04 11:25:43] 2025-06-04 15:25:38,639 | INFO     | [monitor] control thread has ended
[2025-06-04 11:25:43] 2025-06-04 15:25:43,615 | INFO     | all workflow threads have been joined
[2025-06-04 11:25:43] 2025-06-04 15:25:43,615 | INFO     | end of generic workflow (traces error code: 0)
[2025-06-04 11:25:43] 2025-06-04 15:25:43,615 | INFO     | traces error code: 0
[2025-06-04 11:25:43] 2025-06-04 15:25:43,615 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-06-04 11:25:43] 2025-06-04 15:25:43,757 [wrapper] ==== pilot stdout END ====
[2025-06-04 11:25:43] 2025-06-04 15:25:43,759 [wrapper] ==== wrapper stdout RESUME ====
[2025-06-04 11:25:43] 2025-06-04 15:25:43,762 [wrapper] pilotpid: 282987
[2025-06-04 11:25:43] 2025-06-04 15:25:43,765 [wrapper] Pilot exit status: 0
[2025-06-04 11:25:43] 2025-06-04 15:25:43,774 [wrapper] pandaids: 6678392177
[2025-06-04 11:25:43] 2025-06-04 15:25:43,827 [wrapper] cleanup supervisor_pilot  73627 282988
[2025-06-04 11:25:43] 2025-06-04 15:25:43,832 [wrapper] Test setup, not cleaning
[2025-06-04 11:25:43] 2025-06-04 15:25:43,835 [wrapper] apfmon messages muted
[2025-06-04 11:25:43] 2025-06-04 15:25:43,838 [wrapper] ==== wrapper stdout END ====
[2025-06-04 11:25:43] 2025-06-04 15:25:43,841 [wrapper] ==== wrapper stderr END ====
[2025-06-04 11:25:43]  *** Error codes and diagnostics ***
[2025-06-04 11:25:43]     "exeErrorCode": 0,
[2025-06-04 11:25:43]     "exeErrorDiag": "",
[2025-06-04 11:25:43]     "pilotErrorCode": 0,
[2025-06-04 11:25:43]     "pilotErrorDiag": "",
[2025-06-04 11:25:43]  *** Listing of results directory ***
[2025-06-04 11:25:43] total 388236
[2025-06-04 11:25:43] -rw-r--r-- 1 boincer umatlas    495897 Jun  4 03:34 pilot3.tar.gz
[2025-06-04 11:25:43] -rw-r--r-- 1 boincer umatlas      5111 Jun  4 03:40 queuedata.json
[2025-06-04 11:25:43] -rwx------ 1 boincer umatlas     37140 Jun  4 03:41 runpilot2-wrapper.sh
[2025-06-04 11:25:43] -rw-r--r-- 1 boincer umatlas       100 Jun  4 10:29 wrapper_26015_x86_64-pc-linux-gnu
[2025-06-04 11:25:43] -rwxr-xr-x 1 boincer umatlas      7986 Jun  4 10:29 run_atlas
[2025-06-04 11:25:43] -rw-r--r-- 1 boincer umatlas       105 Jun  4 10:29 job.xml
[2025-06-04 11:25:43] -rw-r--r-- 2 boincer umatlas 214786920 Jun  4 10:29 EVNT.45006593._002209.pool.root.1
[2025-06-04 11:25:43] -rw-r--r-- 2 boincer umatlas     15093 Jun  4 10:29 start_atlas.sh
[2025-06-04 11:25:43] drwxrwx--x 2 boincer umatlas      4096 Jun  4 10:29 shared
[2025-06-04 11:25:43] -rw-r--r-- 2 boincer umatlas    508883 Jun  4 10:29 input.tar.gz
[2025-06-04 11:25:43] -rw-r--r-- 1 boincer umatlas         0 Jun  4 10:29 boinc_lockfile
[2025-06-04 11:25:43] -rw-r--r-- 1 boincer umatlas      2524 Jun  4 10:29 pandaJob.out
[2025-06-04 11:25:43] -rw------- 1 boincer umatlas    986819 Jun  4 10:29 agis_schedconf.cvmfs.json
[2025-06-04 11:25:43] -rw------- 1 boincer umatlas   1598969 Jun  4 10:29 agis_ddmendpoints.agis.ALL.json
[2025-06-04 11:25:43] drwx------ 4 boincer umatlas      4096 Jun  4 10:29 pilot3
[2025-06-04 11:25:43] -rw-r--r-- 1 boincer umatlas      6355 Jun  4 11:18 init_data.xml
[2025-06-04 11:25:43] -rw------- 1 boincer umatlas 177641568 Jun  4 11:24 HITS.45006595._055206.pool.root.1
[2025-06-04 11:25:43] -rw-r--r-- 1 boincer umatlas       529 Jun  4 11:25 boinc_task_state.xml
[2025-06-04 11:25:43] -rw------- 1 boincer umatlas        95 Jun  4 11:25 pilot_heartbeat.json
[2025-06-04 11:25:43] -rw------- 1 boincer umatlas      1047 Jun  4 11:25 memory_monitor_summary.json
[2025-06-04 11:25:43] -rw------- 1 boincer umatlas    298887 Jun  4 11:25 log.45006595._055206.job.log.tgz.1
[2025-06-04 11:25:43] -rw------- 1 boincer umatlas      7732 Jun  4 11:25 heartbeat.json
[2025-06-04 11:25:43] -rw-r--r-- 1 boincer umatlas      8192 Jun  4 11:25 boinc_mmap_file
[2025-06-04 11:25:43] -rw-r--r-- 1 boincer umatlas        27 Jun  4 11:25 wrapper_checkpoint.txt
[2025-06-04 11:25:43] -rw------- 1 boincer umatlas      4425 Jun  4 11:25 pilotlog.txt
[2025-06-04 11:25:43] -rw------- 1 boincer umatlas    345487 Jun  4 11:25 log.45006595._055206.job.log.1
[2025-06-04 11:25:43] -rw------- 1 boincer umatlas       357 Jun  4 11:25 output.list
[2025-06-04 11:25:43] -rw-r--r-- 1 boincer umatlas       620 Jun  4 11:25 runtime_log
[2025-06-04 11:25:43] -rw------- 1 boincer umatlas    665600 Jun  4 11:25 result.tar.gz
[2025-06-04 11:25:43] -rw-r--r-- 1 boincer umatlas      8669 Jun  4 11:25 runtime_log.err
[2025-06-04 11:25:43] -rw------- 1 boincer umatlas       658 Jun  4 11:25 cnhMDmMvxg7nsSi4ap6QjLDmwznN0nGgGQJmUXzaDm7gnKDmWGmfXm.diag
[2025-06-04 11:25:43] -rw-r--r-- 1 boincer umatlas     21351 Jun  4 11:25 stderr.txt
[2025-06-04 11:25:43] HITS file was successfully produced:
[2025-06-04 11:25:43] -rw------- 1 boincer umatlas 177641568 Jun  4 11:24 shared/HITS.pool.root.1
[2025-06-04 11:25:43]  *** Contents of shared directory: ***
[2025-06-04 11:25:43] total 384412
[2025-06-04 11:25:43] -rw-r--r-- 2 boincer umatlas 214786920 Jun  4 10:29 ATLAS.root_0
[2025-06-04 11:25:43] -rw-r--r-- 2 boincer umatlas     15093 Jun  4 10:29 start_atlas.sh
[2025-06-04 11:25:43] -rw-r--r-- 2 boincer umatlas    508883 Jun  4 10:29 input.tar.gz
[2025-06-04 11:25:43] -rw------- 1 boincer umatlas 177641568 Jun  4 11:24 HITS.pool.root.1
[2025-06-04 11:25:43] -rw------- 1 boincer umatlas    665600 Jun  4 11:25 result.tar.gz
11:25:45 (279412): run_atlas exited; CPU time 26954.693913
11:25:45 (279412): called boinc_finish(0)

</stderr_txt>
]]>

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