Stderr output

<core_client_version>7.7.0</core_client_version>
<![CDATA[
<stderr_txt>
10:25:24 (41378): wrapper (7.7.26015): starting
10:25:24 (41378): wrapper: running run_atlas (--nthreads 8)
[2025-06-04 10:25:24] Arguments: --nthreads 8
[2025-06-04 10:25:24] Threads: 8
[2025-06-04 10:25:24] Checking for CVMFS
[2025-06-04 10:25:24] Probing /cvmfs/atlas.cern.ch... OK
[2025-06-04 10:25:24] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-06-04 10:25:24] Running cvmfs_config stat atlas.cern.ch
[2025-06-04 10:25:24] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-06-04 10:25:24] 2.11.2.0 5309 11482 151888 146781 3 293 14027457 18432000 17361 130560 0 65894727 99.742 33005849 64357 http://cvmfs-s1fnal.opensciencegrid.org:8000/cvmfs/atlas.cern.ch http://192.41.237.109:6081 1
[2025-06-04 10:25:24] CVMFS is ok
[2025-06-04 10:25:24] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-06-04 10:25:24] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2025-06-04 10:25:24] Further information can be found at the LHC@home message board.
[2025-06-04 10:25:24] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-06-04 10:25:24] Checking for apptainer binary...
[2025-06-04 10:25:24] Using apptainer found in PATH at /usr/bin/apptainer
[2025-06-04 10:25:24] Running /usr/bin/apptainer --version
[2025-06-04 10:25:24] apptainer version 1.3.2-1.el7
[2025-06-04 10:25:24] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-06-04 10:25:28] c-212-7.aglt2.org
[2025-06-04 10:25:28] apptainer works
[2025-06-04 10:25:28] Set ATHENA_PROC_NUMBER=8
[2025-06-04 10:25:28] Set ATHENA_CORE_NUMBER=8
[2025-06-04 10:25:28] Starting ATLAS job with PandaID=6679707440
[2025-06-04 10:25:28] Running command: /usr/bin/apptainer exec -B /cvmfs,/tmp/boinchome/slots/0 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-06-04 11:46:03]  *** The last 200 lines of the pilot log: ***
[2025-06-04 11:46:03]  workdir=None
[2025-06-04 11:46:03] ]
[2025-06-04 11:46:03] 2025-06-04 15:45:20,465 | INFO     | transferring file log.45006595._056647.job.log.tgz.1 from /tmp/boinchome/slots/0/PanDA_Pilot-6679707440/log.45006595._056647.job.log.tgz.1 to /tmp/boinchome/slots/
[2025-06-04 11:46:03] 2025-06-04 15:45:20,465 | INFO     | executing command: /usr/bin/env mv /tmp/boinchome/slots/0/PanDA_Pilot-6679707440/log.45006595._056647.job.log.tgz.1 /tmp/boinchome/slots/0/log.45006595._056647.job
[2025-06-04 11:46:03] 2025-06-04 15:45:20,600 | INFO     | adding to output.list: log.45006595._056647.job.log.tgz.1 davs://dav.ndgf.org:443/atlas/disk/atlasdatadisk/rucio/mc23_13p6TeV/47/b0/log.45006595._056647.job.log.tg
[2025-06-04 11:46:03] 2025-06-04 15:45:20,601 | INFO     | alt stage-out settings: ['pl', 'write_lan', 'w', 'default'], allow_altstageout=False, remain_files=0, has_altstorage=True
[2025-06-04 11:46:03] 2025-06-04 15:45:20,601 | INFO     | summary of transferred files:
[2025-06-04 11:46:03] 2025-06-04 15:45:20,601 | INFO     |  -- lfn=log.45006595._056647.job.log.tgz.1, status_code=0, status=transferred
[2025-06-04 11:46:03] 2025-06-04 15:45:20,601 | INFO     | stage-out finished correctly
[2025-06-04 11:46:03] 2025-06-04 15:45:21,411 | WARNING  | process 58285 can no longer be monitored (due to stat problems) - aborting
[2025-06-04 11:46:03] 2025-06-04 15:45:21,411 | INFO     | using path: /tmp/boinchome/slots/0/PanDA_Pilot-6679707440/memory_monitor_summary.json (trf name=prmon)
[2025-06-04 11:46:03] 2025-06-04 15:45:21,598 | INFO     | finished stage-out for finished payload, adding job to finished_jobs queue
[2025-06-04 11:46:03] 2025-06-04 15:45:21,697 | INFO     | job 6679707440 has state=finished
[2025-06-04 11:46:03] 2025-06-04 15:45:21,697 | INFO     | preparing for final server update for job 6679707440 in state='finished'
[2025-06-04 11:46:03] 2025-06-04 15:45:21,698 | INFO     | this job has now completed (state=finished)
[2025-06-04 11:46:03] 2025-06-04 15:45:21,698 | INFO     | pilot will not update the server (heartbeat message will be written to file)
[2025-06-04 11:46:03] 2025-06-04 15:45:21,698 | INFO     | log transfer has been attempted: DONE
[2025-06-04 11:46:03] 2025-06-04 15:45:21,698 | INFO     | job 6679707440 has finished - writing final server update
[2025-06-04 11:46:03] 2025-06-04 15:45:21,699 | INFO     | total number of processed events: 400 (read)
[2025-06-04 11:46:03] 2025-06-04 15:45:21,704 | INFO     | executing command: lscpu
[2025-06-04 11:46:03] 2025-06-04 15:45:21,749 | INFO     | number of running child processes to parent process 58285: 1
[2025-06-04 11:46:03] 2025-06-04 15:45:21,750 | INFO     | maximum number of monitored processes: 6
[2025-06-04 11:46:03] 2025-06-04 15:45:21,954 | INFO     | executing command: export ATLAS_LOCAL_ROOT_BASE=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase;source ${ATLAS_LOCAL_ROOT_BASE}/user/atlasLocalSetup.sh --quiet;lsetup
[2025-06-04 11:46:03] 2025-06-04 15:45:23,883 | INFO     | PID=47361 has CPU usage=10.2% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i PR
[2025-06-04 11:46:03] 2025-06-04 15:45:23,883 | INFO     | .. there are 17 such processes running
[2025-06-04 11:46:03] 2025-06-04 15:45:24,255 | INFO     | monitor loop #356: job 0:6679707440 is in state 'finished'
[2025-06-04 11:46:03] 2025-06-04 15:45:24,255 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-06-04 11:46:03] 2025-06-04 15:45:26,759 | INFO     | monitor loop #357: job 0:6679707440 is in state 'finished'
[2025-06-04 11:46:03] 2025-06-04 15:45:26,759 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-06-04 11:46:03] 2025-06-04 15:45:29,264 | INFO     | monitor loop #358: job 0:6679707440 is in state 'finished'
[2025-06-04 11:46:03] 2025-06-04 15:45:29,264 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-06-04 11:46:03] 2025-06-04 15:45:31,769 | INFO     | monitor loop #359: job 0:6679707440 is in state 'finished'
[2025-06-04 11:46:03] 2025-06-04 15:45:31,778 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-06-04 11:46:03] 2025-06-04 15:45:34,283 | INFO     | monitor loop #360: job 0:6679707440 is in state 'finished'
[2025-06-04 11:46:03] 2025-06-04 15:45:34,283 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-06-04 11:46:03] 2025-06-04 15:45:36,789 | INFO     | monitor loop #361: job 0:6679707440 is in state 'finished'
[2025-06-04 11:46:03] 2025-06-04 15:45:36,789 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-06-04 11:46:03] 2025-06-04 15:45:39,294 | INFO     | monitor loop #362: job 0:6679707440 is in state 'finished'
[2025-06-04 11:46:03] 2025-06-04 15:45:39,294 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-06-04 11:46:03] 2025-06-04 15:45:40,489 | INFO     | CPU arch script returned: x86-64-v3
[2025-06-04 11:46:03] 2025-06-04 15:45:40,490 | INFO     | using path: /tmp/boinchome/slots/0/PanDA_Pilot-6679707440/memory_monitor_summary.json (trf name=prmon)
[2025-06-04 11:46:03] 2025-06-04 15:45:40,490 | INFO     | extracted standard info from prmon json
[2025-06-04 11:46:03] 2025-06-04 15:45:40,490 | INFO     | extracted standard memory fields from prmon json
[2025-06-04 11:46:03] 2025-06-04 15:45:40,490 | WARNING  | GPU info not found in prmon json: 'gpu'
[2025-06-04 11:46:03] 2025-06-04 15:45:40,491 | WARNING  | format EVNTtoHITS has no such key: dbData
[2025-06-04 11:46:03] 2025-06-04 15:45:40,491 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2025-06-04 11:46:03] 2025-06-04 15:45:40,492 | INFO     | fitting pss+swap vs Time
[2025-06-04 11:46:03] 2025-06-04 15:45:40,492 | INFO     | sum of square deviations: 106336877.5
[2025-06-04 11:46:03] 2025-06-04 15:45:40,493 | INFO     | sum of deviations: 1446708025.0
[2025-06-04 11:46:03] 2025-06-04 15:45:40,493 | INFO     | mean x: 1749049663.5
[2025-06-04 11:46:03] 2025-06-04 15:45:40,493 | INFO     | mean y: 2472518.0857142857
[2025-06-04 11:46:03] 2025-06-04 15:45:40,493 | INFO     | -- intersect: -23793262731.983105
[2025-06-04 11:46:03] 2025-06-04 15:45:40,493 | INFO     | intersect: -23793262731.983105
[2025-06-04 11:46:03] 2025-06-04 15:45:40,493 | INFO     | chi2: 0.013148258728975258
[2025-06-04 11:46:03] 2025-06-04 15:45:40,493 | INFO     | -- intersect: -23793262731.983105
[2025-06-04 11:46:03] 2025-06-04 15:45:40,493 | INFO     | current memory leak: 13.60 B/s (using 70 data points, chi2=0.01)
[2025-06-04 11:46:03] 2025-06-04 15:45:40,494 | INFO     | ..............................
[2025-06-04 11:46:03] 2025-06-04 15:45:40,494 | INFO     | . Timing measurements:
[2025-06-04 11:46:03] 2025-06-04 15:45:40,494 | INFO     | . get job = 0 s
[2025-06-04 11:46:03] 2025-06-04 15:45:40,494 | INFO     | . initial setup = 3 s
[2025-06-04 11:46:03] 2025-06-04 15:45:40,494 | INFO     | . payload setup = 21 s
[2025-06-04 11:46:03] 2025-06-04 15:45:40,494 | INFO     | . stage-in = 0 s
[2025-06-04 11:46:03] 2025-06-04 15:45:40,494 | INFO     | . payload execution = 4694 s
[2025-06-04 11:46:03] 2025-06-04 15:45:40,494 | INFO     | . stage-out = 1 s
[2025-06-04 11:46:03] 2025-06-04 15:45:40,494 | INFO     | . log creation = 0 s
[2025-06-04 11:46:03] 2025-06-04 15:45:40,494 | INFO     | ..............................
[2025-06-04 11:46:03] 2025-06-04 15:45:40,569 | INFO     | 
[2025-06-04 11:46:03] 2025-06-04 15:45:40,569 | INFO     | job summary report
[2025-06-04 11:46:03] 2025-06-04 15:45:40,569 | INFO     | --------------------------------------------------
[2025-06-04 11:46:03] 2025-06-04 15:45:40,569 | INFO     | PanDA job id: 6679707440
[2025-06-04 11:46:03] 2025-06-04 15:45:40,569 | INFO     | task id: 45006595
[2025-06-04 11:46:03] 2025-06-04 15:45:40,569 | INFO     | errors: (none)
[2025-06-04 11:46:03] 2025-06-04 15:45:40,569 | INFO     | status: LOG_TRANSFER = DONE 
[2025-06-04 11:46:03] 2025-06-04 15:45:40,570 | INFO     | pilot state: finished 
[2025-06-04 11:46:03] 2025-06-04 15:45:40,570 | INFO     | transexitcode: 0
[2025-06-04 11:46:03] 2025-06-04 15:45:40,570 | INFO     | exeerrorcode: 0
[2025-06-04 11:46:03] 2025-06-04 15:45:40,570 | INFO     | exeerrordiag: 
[2025-06-04 11:46:03] 2025-06-04 15:45:40,570 | INFO     | exitcode: 0
[2025-06-04 11:46:03] 2025-06-04 15:45:40,570 | INFO     | exitmsg: OK
[2025-06-04 11:46:03] 2025-06-04 15:45:40,570 | INFO     | cpuconsumptiontime: 28520 s
[2025-06-04 11:46:03] 2025-06-04 15:45:40,570 | INFO     | nevents: 400
[2025-06-04 11:46:03] 2025-06-04 15:45:40,570 | INFO     | neventsw: 0
[2025-06-04 11:46:03] 2025-06-04 15:45:40,570 | INFO     | pid: 58285
[2025-06-04 11:46:03] 2025-06-04 15:45:40,570 | INFO     | pgrp: 58285
[2025-06-04 11:46:03] 2025-06-04 15:45:40,570 | INFO     | corecount: 8
[2025-06-04 11:46:03] 2025-06-04 15:45:40,570 | INFO     | event service: False
[2025-06-04 11:46:03] 2025-06-04 15:45:40,570 | INFO     | sizes: {0: 2397120, 1: 2397319, 11: 2397319, 18: 2397553, 22: 2397581, 4721: 2423743, 4723: 2432684, 4724: 2432740, 4743: 2432910}
[2025-06-04 11:46:03] 2025-06-04 15:45:40,570 | INFO     | --------------------------------------------------
[2025-06-04 11:46:03] 2025-06-04 15:45:40,570 | INFO     | 
[2025-06-04 11:46:03] 2025-06-04 15:45:40,570 | INFO     | executing command: ls -lF /tmp/boinchome/slots/0
[2025-06-04 11:46:03] 2025-06-04 15:45:40,587 | INFO     | queue jobs had 0 job(s) [purged]
[2025-06-04 11:46:03] 2025-06-04 15:45:40,588 | INFO     | queue payloads had 0 job(s) [purged]
[2025-06-04 11:46:03] 2025-06-04 15:45:40,588 | INFO     | queue data_in had 0 job(s) [purged]
[2025-06-04 11:46:03] 2025-06-04 15:45:40,588 | INFO     | queue data_out had 0 job(s) [purged]
[2025-06-04 11:46:03] 2025-06-04 15:45:40,588 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-06-04 11:46:03] 2025-06-04 15:45:40,588 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-06-04 11:46:03] 2025-06-04 15:45:40,588 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-06-04 11:46:03] 2025-06-04 15:45:40,588 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-06-04 11:46:03] 2025-06-04 15:45:40,588 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-06-04 11:46:03] 2025-06-04 15:45:40,588 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-06-04 11:46:03] 2025-06-04 15:45:40,588 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-06-04 11:46:03] 2025-06-04 15:45:40,588 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-06-04 11:46:03] 2025-06-04 15:45:40,588 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-06-04 11:46:03] 2025-06-04 15:45:40,588 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-06-04 11:46:03] 2025-06-04 15:45:40,588 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-06-04 11:46:03] 2025-06-04 15:45:40,588 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-06-04 11:46:03] 2025-06-04 15:45:40,588 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-06-04 11:46:03] 2025-06-04 15:45:40,588 | INFO     | queue completed_jobids has 1 job(s)
[2025-06-04 11:46:03] 2025-06-04 15:45:40,588 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-06-04 11:46:03] 2025-06-04 15:45:40,589 | INFO     | queue messages had 0 job(s) [purged]
[2025-06-04 11:46:03] 2025-06-04 15:45:40,589 | INFO     | job 6679707440 has completed (purged errors)
[2025-06-04 11:46:03] 2025-06-04 15:45:40,589 | INFO     | overall cleanup function is called
[2025-06-04 11:46:03] 2025-06-04 15:45:41,596 | INFO     | --- collectZombieJob: --- 10, [58285]
[2025-06-04 11:46:03] 2025-06-04 15:45:41,596 | INFO     | zombie collector waiting for pid 58285
[2025-06-04 11:46:03] 2025-06-04 15:45:41,596 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-06-04 11:46:03] 2025-06-04 15:45:41,596 | INFO     | collected zombie processes
[2025-06-04 11:46:03] 2025-06-04 15:45:41,597 | INFO     | will attempt to kill all subprocesses of pid=58285
[2025-06-04 11:46:03] 2025-06-04 15:45:41,931 | INFO     | process IDs to be killed: [58285] (in reverse order)
[2025-06-04 11:46:03] 2025-06-04 15:45:42,045 | WARNING  | found no corresponding commands to process id(s)
[2025-06-04 11:46:03] 2025-06-04 15:45:42,045 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-06-04 11:46:03] 2025-06-04 15:45:42,054 | INFO     | did not find any defunct processes belonging to 58285
[2025-06-04 11:46:03] 2025-06-04 15:45:42,061 | INFO     | did not find any defunct processes belonging to 58285
[2025-06-04 11:46:03] 2025-06-04 15:45:42,061 | INFO     | ready for new job
[2025-06-04 11:46:03] 2025-06-04 15:45:42,061 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-06-04 11:46:03] 2025-06-04 15:45:42,063 | INFO     | **************************************
[2025-06-04 11:46:03] 2025-06-04 15:45:42,063 | INFO     | ***  PanDA Pilot version 3.10.2.2  ***
[2025-06-04 11:46:03] 2025-06-04 15:45:42,063 | INFO     | **************************************
[2025-06-04 11:46:03] 2025-06-04 15:45:42,063 | INFO     | 
[2025-06-04 11:46:03] 2025-06-04 15:45:42,067 | INFO     | architecture information:
[2025-06-04 11:46:03] 2025-06-04 15:45:42,067 | INFO     | executing command: cat /etc/os-release
[2025-06-04 11:46:03] 2025-06-04 15:45:42,190 | INFO     | cat /etc/os-release:
[2025-06-04 11:46:03] NAME="CentOS Linux"
[2025-06-04 11:46:03] VERSION="7 (Core)"
[2025-06-04 11:46:03] ID="centos"
[2025-06-04 11:46:03] ID_LIKE="rhel fedora"
[2025-06-04 11:46:03] VERSION_ID="7"
[2025-06-04 11:46:03] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-06-04 11:46:03] ANSI_COLOR="0;31"
[2025-06-04 11:46:03] CPE_NAME="cpe:/o:centos:centos:7"
[2025-06-04 11:46:03] HOME_URL="https://www.centos.org/"
[2025-06-04 11:46:03] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-06-04 11:46:03] 
[2025-06-04 11:46:03] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-06-04 11:46:03] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-06-04 11:46:03] REDHAT_SUPPORT_PRODUCT="centos"
[2025-06-04 11:46:03] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-06-04 11:46:03] 
[2025-06-04 11:46:03] 2025-06-04 15:45:42,190 | INFO     | **************************************
[2025-06-04 11:46:03] 2025-06-04 15:45:42,692 | INFO     | executing command: df -mP /tmp/boinchome/slots/0
[2025-06-04 11:46:03] 2025-06-04 15:45:42,709 | INFO     | sufficient remaining disk space (104506327040 B)
[2025-06-04 11:46:03] 2025-06-04 15:45:42,709 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-06-04 11:46:03] 2025-06-04 15:45:42,709 | INFO     | current server update state: UPDATING_FINAL
[2025-06-04 11:46:03] 2025-06-04 15:45:42,709 | INFO     | update_server=False
[2025-06-04 11:46:03] 2025-06-04 15:45:42,710 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-06-04 11:46:03] 2025-06-04 15:45:42,710 | WARNING  | aborting monitor loop since graceful_stop has been set (timing out remaining threads)
[2025-06-04 11:46:03] 2025-06-04 15:45:42,710 | INFO     | found 0 job(s) in 20 queues
[2025-06-04 11:46:03] 2025-06-04 15:45:42,710 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-06-04 11:46:03] 2025-06-04 15:45:42,710 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-06-04 11:46:03] 2025-06-04 15:45:42,807 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-06-04 11:46:03] 2025-06-04 15:45:42,807 | INFO     | aborting loop
[2025-06-04 11:46:03] 2025-06-04 15:45:42,834 | INFO     | all payload control threads have been joined
[2025-06-04 11:46:03] 2025-06-04 15:45:43,024 | INFO     | all job control threads have been joined
[2025-06-04 11:46:03] 2025-06-04 15:45:43,703 | INFO     | all data control threads have been joined
[2025-06-04 11:46:03] 2025-06-04 15:45:43,714 | INFO     | [job] retrieve thread has finished
[2025-06-04 11:46:03] 2025-06-04 15:45:43,800 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-06-04 11:46:03] 2025-06-04 15:45:43,813 | INFO     | [job] job monitor thread has finished
[2025-06-04 11:46:03] 2025-06-04 15:45:43,839 | INFO     | [payload] control thread has finished
[2025-06-04 11:46:03] 2025-06-04 15:45:43,948 | INFO     | [payload] failed_post thread has finished
[2025-06-04 11:46:03] 2025-06-04 15:45:44,030 | INFO     | [job] control thread has finished
[2025-06-04 11:46:03] 2025-06-04 15:45:44,531 | INFO     | [job] validate thread has finished
[2025-06-04 11:46:03] 2025-06-04 15:45:44,709 | INFO     | [data] control thread has finished
[2025-06-04 11:46:03] 2025-06-04 15:45:44,758 | INFO     | [payload] validate_pre thread has finished
[2025-06-04 11:46:03] 2025-06-04 15:45:44,763 | INFO     | [job] create_data_payload thread has finished
[2025-06-04 11:46:03] 2025-06-04 15:45:44,906 | INFO     | [data] copytool_in thread has finished
[2025-06-04 11:46:03] 2025-06-04 15:45:44,929 | INFO     | [payload] execute_payloads thread has finished
[2025-06-04 11:46:03] 2025-06-04 15:45:44,989 | INFO     | [payload] validate_post thread has finished
[2025-06-04 11:46:03] 2025-06-04 15:45:45,582 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-06-04 11:46:03] 2025-06-04 15:45:45,747 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-06-04 11:46:03] 2025-06-04 15:45:45,807 | INFO     | [data] copytool_out thread has finished
[2025-06-04 11:46:03] 2025-06-04 15:45:46,588 | INFO     | [job] queue monitor thread has finished
[2025-06-04 11:46:03] 2025-06-04 15:45:49,760 | INFO     | [data] queue_monitor thread has finished
[2025-06-04 11:46:03] 2025-06-04 15:45:53,349 | INFO     | job.realtimelogging is not enabled
[2025-06-04 11:46:03] 2025-06-04 15:45:54,355 | INFO     | [payload] run_realtimelog thread has finished
[2025-06-04 11:46:03] 2025-06-04 15:45:56,385 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 139873403787072)>', '<ExcThread(monitor, started 139872941610752)>']
[2025-06-04 11:46:03] 2025-06-04 15:45:56,786 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-06-04 11:46:03] 2025-06-04 15:45:56,786 | INFO     | [monitor] control thread has ended
[2025-06-04 11:46:03] 2025-06-04 15:46:01,411 | INFO     | all workflow threads have been joined
[2025-06-04 11:46:03] 2025-06-04 15:46:01,411 | INFO     | end of generic workflow (traces error code: 0)
[2025-06-04 11:46:03] 2025-06-04 15:46:01,412 | INFO     | traces error code: 0
[2025-06-04 11:46:03] 2025-06-04 15:46:01,412 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-06-04 11:46:03] 2025-06-04 15:46:01,591 [wrapper] ==== pilot stdout END ====
[2025-06-04 11:46:03] 2025-06-04 15:46:01,605 [wrapper] ==== wrapper stdout RESUME ====
[2025-06-04 11:46:03] 2025-06-04 15:46:01,626 [wrapper] pilotpid: 47361
[2025-06-04 11:46:03] 2025-06-04 15:46:01,646 [wrapper] Pilot exit status: 0
[2025-06-04 11:46:03] 2025-06-04 15:46:01,748 [wrapper] pandaids: 6679707440
[2025-06-04 11:46:03] 2025-06-04 15:46:02,246 [wrapper] cleanup supervisor_pilot 32082 47362
[2025-06-04 11:46:03] 2025-06-04 15:46:02,284 [wrapper] Test setup, not cleaning
[2025-06-04 11:46:03] 2025-06-04 15:46:02,321 [wrapper] apfmon messages muted
[2025-06-04 11:46:03] 2025-06-04 15:46:02,361 [wrapper] ==== wrapper stdout END ====
[2025-06-04 11:46:03] 2025-06-04 15:46:02,400 [wrapper] ==== wrapper stderr END ====
[2025-06-04 11:46:03]  *** Error codes and diagnostics ***
[2025-06-04 11:46:03]     "exeErrorCode": 0,
[2025-06-04 11:46:03]     "exeErrorDiag": "",
[2025-06-04 11:46:03]     "pilotErrorCode": 0,
[2025-06-04 11:46:03]     "pilotErrorDiag": "",
[2025-06-04 11:46:03]  *** Listing of results directory ***
[2025-06-04 11:46:03] total 391132
[2025-06-04 11:46:03] -rw-r--r-- 1 boincer umatlas    495897 Jun  4 08:39 pilot3.tar.gz
[2025-06-04 11:46:03] -rwx------ 1 boincer umatlas     37140 Jun  4 09:01 runpilot2-wrapper.sh
[2025-06-04 11:46:03] -rw-r--r-- 1 boincer umatlas      5111 Jun  4 09:01 queuedata.json
[2025-06-04 11:46:03] -rw-r--r-- 1 boincer umatlas       100 Jun  4 10:25 wrapper_26015_x86_64-pc-linux-gnu
[2025-06-04 11:46:03] -rwxr-xr-x 1 boincer umatlas      7986 Jun  4 10:25 run_atlas
[2025-06-04 11:46:03] -rw-r--r-- 1 boincer umatlas       105 Jun  4 10:25 job.xml
[2025-06-04 11:46:03] -rw-r--r-- 2 boincer umatlas 218696823 Jun  4 10:25 EVNT.45006593._002084.pool.root.1
[2025-06-04 11:46:03] -rw-r--r-- 2 boincer umatlas     15093 Jun  4 10:25 start_atlas.sh
[2025-06-04 11:46:03] drwxrwx--x 2 boincer umatlas      4096 Jun  4 10:25 shared
[2025-06-04 11:46:03] -rw-r--r-- 2 boincer umatlas    508880 Jun  4 10:25 input.tar.gz
[2025-06-04 11:46:03] -rw-r--r-- 1 boincer umatlas         0 Jun  4 10:25 boinc_lockfile
[2025-06-04 11:46:03] -rw-r--r-- 1 boincer umatlas      2524 Jun  4 10:25 pandaJob.out
[2025-06-04 11:46:03] -rw------- 1 boincer umatlas    986819 Jun  4 10:25 agis_schedconf.cvmfs.json
[2025-06-04 11:46:03] -rw------- 1 boincer umatlas   1598969 Jun  4 10:25 agis_ddmendpoints.agis.ALL.json
[2025-06-04 11:46:03] drwx------ 4 boincer umatlas      4096 Jun  4 10:25 pilot3
[2025-06-04 11:46:03] -rw------- 1 boincer umatlas 176472114 Jun  4 11:44 HITS.45006595._056647.pool.root.1
[2025-06-04 11:46:03] -rw-r--r-- 1 boincer umatlas       529 Jun  4 11:44 boinc_task_state.xml
[2025-06-04 11:46:03] -rw------- 1 boincer umatlas      1070 Jun  4 11:45 memory_monitor_summary.json
[2025-06-04 11:46:03] -rw------- 1 boincer umatlas    298994 Jun  4 11:45 log.45006595._056647.job.log.tgz.1
[2025-06-04 11:46:03] -rw-r--r-- 1 boincer umatlas      6387 Jun  4 11:45 init_data.xml
[2025-06-04 11:46:03] -rw------- 1 boincer umatlas        95 Jun  4 11:45 pilot_heartbeat.json
[2025-06-04 11:46:03] -rw------- 1 boincer umatlas      7732 Jun  4 11:45 heartbeat.json
[2025-06-04 11:46:03] -rw------- 1 boincer umatlas      4549 Jun  4 11:46 pilotlog.txt
[2025-06-04 11:46:03] -rw------- 1 boincer umatlas    464616 Jun  4 11:46 log.45006595._056647.job.log.1
[2025-06-04 11:46:03] -rw-r--r-- 1 boincer umatlas      8192 Jun  4 11:46 boinc_mmap_file
[2025-06-04 11:46:03] -rw-r--r-- 1 boincer umatlas        27 Jun  4 11:46 wrapper_checkpoint.txt
[2025-06-04 11:46:03] -rw------- 1 boincer umatlas       357 Jun  4 11:46 output.list
[2025-06-04 11:46:03] -rw-r--r-- 1 boincer umatlas       620 Jun  4 11:46 runtime_log
[2025-06-04 11:46:03] -rw------- 1 boincer umatlas    778240 Jun  4 11:46 result.tar.gz
[2025-06-04 11:46:03] -rw-r--r-- 1 boincer umatlas      8654 Jun  4 11:46 runtime_log.err
[2025-06-04 11:46:03] -rw------- 1 boincer umatlas       657 Jun  4 11:46 89vMDm4u2g7nsSi4ap6QjLDmwznN0nGgGQJmUXzaDm6ynKDmxw7vVo.diag
[2025-06-04 11:46:03] -rw-r--r-- 1 boincer umatlas     22355 Jun  4 11:46 stderr.txt
[2025-06-04 11:46:03] HITS file was successfully produced:
[2025-06-04 11:46:03] -rw------- 1 boincer umatlas 176472114 Jun  4 11:44 shared/HITS.pool.root.1
[2025-06-04 11:46:03]  *** Contents of shared directory: ***
[2025-06-04 11:46:03] total 387192
[2025-06-04 11:46:03] -rw-r--r-- 2 boincer umatlas 218696823 Jun  4 10:25 ATLAS.root_0
[2025-06-04 11:46:03] -rw-r--r-- 2 boincer umatlas     15093 Jun  4 10:25 start_atlas.sh
[2025-06-04 11:46:03] -rw-r--r-- 2 boincer umatlas    508880 Jun  4 10:25 input.tar.gz
[2025-06-04 11:46:03] -rw------- 1 boincer umatlas 176472114 Jun  4 11:44 HITS.pool.root.1
[2025-06-04 11:46:03] -rw------- 1 boincer umatlas    778240 Jun  4 11:46 result.tar.gz
11:46:05 (41378): run_atlas exited; CPU time 28422.595115
11:46:05 (41378): called boinc_finish(0)

</stderr_txt>
]]>

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