Stderr output

<core_client_version>7.20.2</core_client_version>
<![CDATA[
<stderr_txt>
03:23:06 (2585175): wrapper (7.7.26015): starting
03:23:06 (2585175): wrapper: running run_atlas (--nthreads 6)
[2025-06-05 03:23:06] Arguments: --nthreads 6
[2025-06-05 03:23:06] Threads: 6
[2025-06-05 03:23:06] Checking for CVMFS
[2025-06-05 03:23:06] Probing /cvmfs/atlas.cern.ch... OK
[2025-06-05 03:23:06] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-06-05 03:23:06] Running cvmfs_config stat atlas.cern.ch
[2025-06-05 03:23:07] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-06-05 03:23:07] 2.11.5.0 4066018 2631 74840 146791 2 186 47967574 52428801 1492 130560 0 7537131 99.997 677965 98 http://s1cern-cvmfs.openhtc.io/cvmfs/atlas.cern.ch http://128.142.248.156:3126 1
[2025-06-05 03:23:07] CVMFS is ok
[2025-06-05 03:23:07] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-06-05 03:23:07] Checking for apptainer binary...
[2025-06-05 03:23:07] Using apptainer found in PATH at /usr/bin/apptainer
[2025-06-05 03:23:07] Running /usr/bin/apptainer --version
[2025-06-05 03:23:07] apptainer version 1.3.5-1.el9
[2025-06-05 03:23:07] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-06-05 03:23:07] testio008
[2025-06-05 03:23:07] apptainer works
[2025-06-05 03:23:07] Set ATHENA_PROC_NUMBER=6
[2025-06-05 03:23:07] Set ATHENA_CORE_NUMBER=6
[2025-06-05 03:23:07] Starting ATLAS job with PandaID=6679656731
[2025-06-05 03:23:07] Running command: /usr/bin/apptainer exec -B /cvmfs,/var/lib/boinc/slots/5 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-06-05 04:28:03]  *** The last 200 lines of the pilot log: ***
[2025-06-05 04:28:03]  status_code=0
[2025-06-05 04:28:03]  storage_token=
[2025-06-05 04:28:03]  surl=/var/lib/boinc/slots/5/PanDA_Pilot-6679656731/log.45006595._056579.job.log.tgz.1
[2025-06-05 04:28:03]  turl=davs://dav.ndgf.org:443/atlas/disk/atlasdatadisk/rucio/mc23_13p6TeV/6e/7b/log.45006595._056579.job.log.tgz.1
[2025-06-05 04:28:03]  workdir=None
[2025-06-05 04:28:03] ]
[2025-06-05 04:28:03] 2025-06-04 19:27:36,236 | INFO     | transferring file log.45006595._056579.job.log.tgz.1 from /var/lib/boinc/slots/5/PanDA_Pilot-6679656731/log.45006595._056579.job.log.tgz.1 to /var/lib/boinc/slots/
[2025-06-05 04:28:03] 2025-06-04 19:27:36,236 | INFO     | executing command: /usr/bin/env mv /var/lib/boinc/slots/5/PanDA_Pilot-6679656731/log.45006595._056579.job.log.tgz.1 /var/lib/boinc/slots/5/log.45006595._056579.job
[2025-06-05 04:28:03] 2025-06-04 19:27:36,247 | INFO     | adding to output.list: log.45006595._056579.job.log.tgz.1 davs://dav.ndgf.org:443/atlas/disk/atlasdatadisk/rucio/mc23_13p6TeV/6e/7b/log.45006595._056579.job.log.tg
[2025-06-05 04:28:03] 2025-06-04 19:27:36,248 | INFO     | alt stage-out settings: ['pl', 'write_lan', 'w', 'default'], allow_altstageout=False, remain_files=0, has_altstorage=True
[2025-06-05 04:28:03] 2025-06-04 19:27:36,248 | INFO     | summary of transferred files:
[2025-06-05 04:28:03] 2025-06-04 19:27:36,248 | INFO     |  -- lfn=log.45006595._056579.job.log.tgz.1, status_code=0, status=transferred
[2025-06-05 04:28:03] 2025-06-04 19:27:36,248 | INFO     | stage-out finished correctly
[2025-06-05 04:28:03] 2025-06-04 19:27:38,370 | WARNING  | process 2595463 can no longer be monitored (due to stat problems) - aborting
[2025-06-05 04:28:03] 2025-06-04 19:27:38,370 | INFO     | using path: /var/lib/boinc/slots/5/PanDA_Pilot-6679656731/memory_monitor_summary.json (trf name=prmon)
[2025-06-05 04:28:03] 2025-06-04 19:27:38,370 | INFO     | using path: /var/lib/boinc/slots/5/PanDA_Pilot-6679656731/memory_monitor_summary.json (trf name=prmon)
[2025-06-05 04:28:03] 2025-06-04 19:27:38,371 | INFO     | payload log (log.EVNTtoHITS) within allowed size limit (2147483648 B): 2530892 B
[2025-06-05 04:28:03] 2025-06-04 19:27:38,371 | INFO     | payload log (payload.stdout) within allowed size limit (2147483648 B): 15781 B
[2025-06-05 04:28:03] 2025-06-04 19:27:38,371 | INFO     | executing command: df -mP /var/lib/boinc/slots/5
[2025-06-05 04:28:03] 2025-06-04 19:27:38,378 | INFO     | sufficient remaining disk space (277483618304 B)
[2025-06-05 04:28:03] 2025-06-04 19:27:38,378 | INFO     | work directory size check will use 2537553920 B as a max limit (10% grace limit added)
[2025-06-05 04:28:03] 2025-06-04 19:27:38,378 | INFO     | size of work directory /var/lib/boinc/slots/5/PanDA_Pilot-6679656731: 2820684 B (within 2537553920 B limit)
[2025-06-05 04:28:03] 2025-06-04 19:27:38,378 | INFO     | pfn file=/var/lib/boinc/slots/5/PanDA_Pilot-6679656731/HITS.45006595._056579.pool.root.1 does not exist (skip from workdir size calculation)
[2025-06-05 04:28:03] 2025-06-04 19:27:38,379 | INFO     | total size of present files: 0 B (workdir size: 2820684 B)
[2025-06-05 04:28:03] 2025-06-04 19:27:38,379 | INFO     | output file size check: skipping output file /var/lib/boinc/slots/5/PanDA_Pilot-6679656731/HITS.45006595._056579.pool.root.1 since it does not exist
[2025-06-05 04:28:03] 2025-06-04 19:27:38,431 | INFO     | number of running child processes to parent process 2595463: 1
[2025-06-05 04:28:03] 2025-06-04 19:27:38,431 | INFO     | maximum number of monitored processes: 6
[2025-06-05 04:28:03] 2025-06-04 19:27:38,843 | INFO     | finished stage-out for finished payload, adding job to finished_jobs queue
[2025-06-05 04:28:03] 2025-06-04 19:27:40,887 | INFO     | job 6679656731 has state=finished
[2025-06-05 04:28:03] 2025-06-04 19:27:40,887 | INFO     | preparing for final server update for job 6679656731 in state='finished'
[2025-06-05 04:28:03] 2025-06-04 19:27:40,888 | INFO     | this job has now completed (state=finished)
[2025-06-05 04:28:03] 2025-06-04 19:27:40,888 | INFO     | pilot will not update the server (heartbeat message will be written to file)
[2025-06-05 04:28:03] 2025-06-04 19:27:40,888 | INFO     | log transfer has been attempted: DONE
[2025-06-05 04:28:03] 2025-06-04 19:27:40,888 | INFO     | job 6679656731 has finished - writing final server update
[2025-06-05 04:28:03] 2025-06-04 19:27:40,888 | INFO     | total number of processed events: 400 (read)
[2025-06-05 04:28:03] 2025-06-04 19:27:40,890 | INFO     | executing command: lscpu
[2025-06-05 04:28:03] 2025-06-04 19:27:40,909 | INFO     | executing command: export ATLAS_LOCAL_ROOT_BASE=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase;source ${ATLAS_LOCAL_ROOT_BASE}/user/atlasLocalSetup.sh --quiet;lsetup
[2025-06-05 04:28:03] 2025-06-04 19:27:40,934 | INFO     | monitor loop #290: job 0:6679656731 is in state 'finished'
[2025-06-05 04:28:03] 2025-06-04 19:27:40,935 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-06-05 04:28:03] 2025-06-04 19:27:43,173 | INFO     | CPU arch script returned: x86-64-v3
[2025-06-05 04:28:03] 2025-06-04 19:27:43,173 | INFO     | using path: /var/lib/boinc/slots/5/PanDA_Pilot-6679656731/memory_monitor_summary.json (trf name=prmon)
[2025-06-05 04:28:03] 2025-06-04 19:27:43,173 | INFO     | extracted standard info from prmon json
[2025-06-05 04:28:03] 2025-06-04 19:27:43,173 | INFO     | extracted standard memory fields from prmon json
[2025-06-05 04:28:03] 2025-06-04 19:27:43,173 | WARNING  | GPU info not found in prmon json: 'gpu'
[2025-06-05 04:28:03] 2025-06-04 19:27:43,173 | WARNING  | format EVNTtoHITS has no such key: dbData
[2025-06-05 04:28:03] 2025-06-04 19:27:43,173 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2025-06-05 04:28:03] 2025-06-04 19:27:43,174 | INFO     | fitting pss+swap vs Time
[2025-06-05 04:28:03] 2025-06-04 19:27:43,174 | INFO     | sum of square deviations: 54438230.0
[2025-06-05 04:28:03] 2025-06-04 19:27:43,174 | INFO     | sum of deviations: 10515975318.0
[2025-06-05 04:28:03] 2025-06-04 19:27:43,174 | INFO     | mean x: 1749063392.5
[2025-06-05 04:28:03] 2025-06-04 19:27:43,174 | INFO     | mean y: 2415524.214285714
[2025-06-05 04:28:03] 2025-06-04 19:27:43,174 | INFO     | -- intersect: -337868736148.9269
[2025-06-05 04:28:03] 2025-06-04 19:27:43,174 | INFO     | intersect: -337868736148.9269
[2025-06-05 04:28:03] 2025-06-04 19:27:43,174 | INFO     | chi2: 1.495501665485653
[2025-06-05 04:28:03] 2025-06-04 19:27:43,174 | INFO     | -- intersect: -337868736148.9269
[2025-06-05 04:28:03] 2025-06-04 19:27:43,174 | INFO     | current memory leak: 193.17 B/s (using 56 data points, chi2=1.50)
[2025-06-05 04:28:03] 2025-06-04 19:27:43,174 | INFO     | ..............................
[2025-06-05 04:28:03] 2025-06-04 19:27:43,174 | INFO     | . Timing measurements:
[2025-06-05 04:28:03] 2025-06-04 19:27:43,174 | INFO     | . get job = 0 s
[2025-06-05 04:28:03] 2025-06-04 19:27:43,174 | INFO     | . initial setup = 3 s
[2025-06-05 04:28:03] 2025-06-04 19:27:43,174 | INFO     | . payload setup = 1 s
[2025-06-05 04:28:03] 2025-06-04 19:27:43,174 | INFO     | . stage-in = 0 s
[2025-06-05 04:28:03] 2025-06-04 19:27:43,174 | INFO     | . payload execution = 3844 s
[2025-06-05 04:28:03] 2025-06-04 19:27:43,174 | INFO     | . stage-out = 0 s
[2025-06-05 04:28:03] 2025-06-04 19:27:43,174 | INFO     | . log creation = 0 s
[2025-06-05 04:28:03] 2025-06-04 19:27:43,174 | INFO     | ..............................
[2025-06-05 04:28:03] 2025-06-04 19:27:43,202 | INFO     | 
[2025-06-05 04:28:03] 2025-06-04 19:27:43,202 | INFO     | job summary report
[2025-06-05 04:28:03] 2025-06-04 19:27:43,203 | INFO     | --------------------------------------------------
[2025-06-05 04:28:03] 2025-06-04 19:27:43,203 | INFO     | PanDA job id: 6679656731
[2025-06-05 04:28:03] 2025-06-04 19:27:43,203 | INFO     | task id: 45006595
[2025-06-05 04:28:03] 2025-06-04 19:27:43,203 | INFO     | errors: (none)
[2025-06-05 04:28:03] 2025-06-04 19:27:43,203 | INFO     | status: LOG_TRANSFER = DONE 
[2025-06-05 04:28:03] 2025-06-04 19:27:43,203 | INFO     | pilot state: finished 
[2025-06-05 04:28:03] 2025-06-04 19:27:43,203 | INFO     | transexitcode: 0
[2025-06-05 04:28:03] 2025-06-04 19:27:43,203 | INFO     | exeerrorcode: 0
[2025-06-05 04:28:03] 2025-06-04 19:27:43,203 | INFO     | exeerrordiag: 
[2025-06-05 04:28:03] 2025-06-04 19:27:43,203 | INFO     | exitcode: 0
[2025-06-05 04:28:03] 2025-06-04 19:27:43,203 | INFO     | exitmsg: OK
[2025-06-05 04:28:03] 2025-06-04 19:27:43,203 | INFO     | cpuconsumptiontime: 18846 s
[2025-06-05 04:28:03] 2025-06-04 19:27:43,203 | INFO     | nevents: 400
[2025-06-05 04:28:03] 2025-06-04 19:27:43,203 | INFO     | neventsw: 0
[2025-06-05 04:28:03] 2025-06-04 19:27:43,203 | INFO     | pid: 2595463
[2025-06-05 04:28:03] 2025-06-04 19:27:43,203 | INFO     | pgrp: 2595463
[2025-06-05 04:28:03] 2025-06-04 19:27:43,203 | INFO     | corecount: 6
[2025-06-05 04:28:03] 2025-06-04 19:27:43,203 | INFO     | event service: False
[2025-06-05 04:28:03] 2025-06-04 19:27:43,203 | INFO     | sizes: {0: 2397241, 1: 2397447, 10: 2397475, 3849: 2423187, 3850: 2432183, 3853: 2432211, 3857: 2432509}
[2025-06-05 04:28:03] 2025-06-04 19:27:43,203 | INFO     | --------------------------------------------------
[2025-06-05 04:28:03] 2025-06-04 19:27:43,203 | INFO     | 
[2025-06-05 04:28:03] 2025-06-04 19:27:43,203 | INFO     | executing command: ls -lF /var/lib/boinc/slots/5
[2025-06-05 04:28:03] 2025-06-04 19:27:43,211 | INFO     | queue jobs had 0 job(s) [purged]
[2025-06-05 04:28:03] 2025-06-04 19:27:43,211 | INFO     | queue payloads had 0 job(s) [purged]
[2025-06-05 04:28:03] 2025-06-04 19:27:43,211 | INFO     | queue data_in had 0 job(s) [purged]
[2025-06-05 04:28:03] 2025-06-04 19:27:43,211 | INFO     | queue data_out had 0 job(s) [purged]
[2025-06-05 04:28:03] 2025-06-04 19:27:43,211 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-06-05 04:28:03] 2025-06-04 19:27:43,211 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-06-05 04:28:03] 2025-06-04 19:27:43,211 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-06-05 04:28:03] 2025-06-04 19:27:43,211 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-06-05 04:28:03] 2025-06-04 19:27:43,211 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-06-05 04:28:03] 2025-06-04 19:27:43,211 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-06-05 04:28:03] 2025-06-04 19:27:43,211 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-06-05 04:28:03] 2025-06-04 19:27:43,211 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-06-05 04:28:03] 2025-06-04 19:27:43,211 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-06-05 04:28:03] 2025-06-04 19:27:43,211 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-06-05 04:28:03] 2025-06-04 19:27:43,211 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-06-05 04:28:03] 2025-06-04 19:27:43,212 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-06-05 04:28:03] 2025-06-04 19:27:43,212 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-06-05 04:28:03] 2025-06-04 19:27:43,212 | INFO     | queue completed_jobids has 1 job(s)
[2025-06-05 04:28:03] 2025-06-04 19:27:43,212 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-06-05 04:28:03] 2025-06-04 19:27:43,212 | INFO     | queue messages had 0 job(s) [purged]
[2025-06-05 04:28:03] 2025-06-04 19:27:43,212 | INFO     | job 6679656731 has completed (purged errors)
[2025-06-05 04:28:03] 2025-06-04 19:27:43,212 | INFO     | overall cleanup function is called
[2025-06-05 04:28:03] 2025-06-04 19:27:44,218 | INFO     | --- collectZombieJob: --- 10, [2595463]
[2025-06-05 04:28:03] 2025-06-04 19:27:44,218 | INFO     | zombie collector waiting for pid 2595463
[2025-06-05 04:28:03] 2025-06-04 19:27:44,218 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-06-05 04:28:03] 2025-06-04 19:27:44,218 | INFO     | collected zombie processes
[2025-06-05 04:28:03] 2025-06-04 19:27:44,218 | INFO     | will attempt to kill all subprocesses of pid=2595463
[2025-06-05 04:28:03] 2025-06-04 19:27:44,270 | INFO     | process IDs to be killed: [2595463] (in reverse order)
[2025-06-05 04:28:03] 2025-06-04 19:27:44,291 | WARNING  | found no corresponding commands to process id(s)
[2025-06-05 04:28:03] 2025-06-04 19:27:44,291 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-06-05 04:28:03] 2025-06-04 19:27:44,293 | INFO     | did not find any defunct processes belonging to 2595463
[2025-06-05 04:28:03] 2025-06-04 19:27:44,295 | INFO     | did not find any defunct processes belonging to 2595463
[2025-06-05 04:28:03] 2025-06-04 19:27:44,295 | INFO     | ready for new job
[2025-06-05 04:28:03] 2025-06-04 19:27:44,295 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-06-05 04:28:03] 2025-06-04 19:27:44,296 | INFO     | **************************************
[2025-06-05 04:28:03] 2025-06-04 19:27:44,296 | INFO     | ***  PanDA Pilot version 3.10.2.2  ***
[2025-06-05 04:28:03] 2025-06-04 19:27:44,296 | INFO     | **************************************
[2025-06-05 04:28:03] 2025-06-04 19:27:44,296 | INFO     | 
[2025-06-05 04:28:03] 2025-06-04 19:27:44,297 | INFO     | architecture information:
[2025-06-05 04:28:03] 2025-06-04 19:27:44,297 | INFO     | executing command: cat /etc/os-release
[2025-06-05 04:28:03] 2025-06-04 19:27:44,303 | INFO     | cat /etc/os-release:
[2025-06-05 04:28:03] NAME="CentOS Linux"
[2025-06-05 04:28:03] VERSION="7 (Core)"
[2025-06-05 04:28:03] ID="centos"
[2025-06-05 04:28:03] ID_LIKE="rhel fedora"
[2025-06-05 04:28:03] VERSION_ID="7"
[2025-06-05 04:28:03] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-06-05 04:28:03] ANSI_COLOR="0;31"
[2025-06-05 04:28:03] CPE_NAME="cpe:/o:centos:centos:7"
[2025-06-05 04:28:03] HOME_URL="https://www.centos.org/"
[2025-06-05 04:28:03] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-06-05 04:28:03] 
[2025-06-05 04:28:03] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-06-05 04:28:03] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-06-05 04:28:03] REDHAT_SUPPORT_PRODUCT="centos"
[2025-06-05 04:28:03] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-06-05 04:28:03] 
[2025-06-05 04:28:03] 2025-06-04 19:27:44,303 | INFO     | **************************************
[2025-06-05 04:28:03] 2025-06-04 19:27:44,806 | INFO     | executing command: df -mP /var/lib/boinc/slots/5
[2025-06-05 04:28:03] 2025-06-04 19:27:44,812 | INFO     | sufficient remaining disk space (277487812608 B)
[2025-06-05 04:28:03] 2025-06-04 19:27:44,813 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-06-05 04:28:03] 2025-06-04 19:27:44,813 | INFO     | current server update state: UPDATING_FINAL
[2025-06-05 04:28:03] 2025-06-04 19:27:44,813 | INFO     | update_server=False
[2025-06-05 04:28:03] 2025-06-04 19:27:44,813 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-06-05 04:28:03] 2025-06-04 19:27:44,813 | WARNING  | aborting monitor loop since graceful_stop has been set (timing out remaining threads)
[2025-06-05 04:28:03] 2025-06-04 19:27:44,813 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-06-05 04:28:03] 2025-06-04 19:27:44,813 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-06-05 04:28:03] 2025-06-04 19:27:44,813 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-06-05 04:28:03] 2025-06-04 19:27:44,813 | INFO     | found 0 job(s) in 20 queues
[2025-06-05 04:28:03] 2025-06-04 19:27:44,814 | INFO     | aborting loop
[2025-06-05 04:28:03] 2025-06-04 19:27:44,814 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-06-05 04:28:03] 2025-06-04 19:27:44,814 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-06-05 04:28:03] 2025-06-04 19:27:44,891 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-06-05 04:28:03] 2025-06-04 19:27:45,010 | INFO     | all data control threads have been joined
[2025-06-05 04:28:03] 2025-06-04 19:27:45,314 | INFO     | all payload control threads have been joined
[2025-06-05 04:28:03] 2025-06-04 19:27:45,611 | INFO     | all job control threads have been joined
[2025-06-05 04:28:03] 2025-06-04 19:27:45,814 | INFO     | [job] queue monitor thread has finished
[2025-06-05 04:28:03] 2025-06-04 19:27:45,817 | INFO     | [job] retrieve thread has finished
[2025-06-05 04:28:03] 2025-06-04 19:27:45,818 | INFO     | [job] job monitor thread has finished
[2025-06-05 04:28:03] 2025-06-04 19:27:46,009 | INFO     | [data] copytool_in thread has finished
[2025-06-05 04:28:03] 2025-06-04 19:27:46,015 | INFO     | [data] control thread has finished
[2025-06-05 04:28:03] 2025-06-04 19:27:46,056 | INFO     | [payload] failed_post thread has finished
[2025-06-05 04:28:03] 2025-06-04 19:27:46,292 | INFO     | [payload] validate_pre thread has finished
[2025-06-05 04:28:03] 2025-06-04 19:27:46,298 | INFO     | [job] validate thread has finished
[2025-06-05 04:28:03] 2025-06-04 19:27:46,317 | INFO     | [payload] control thread has finished
[2025-06-05 04:28:03] 2025-06-04 19:27:46,565 | INFO     | [payload] validate_post thread has finished
[2025-06-05 04:28:03] 2025-06-04 19:27:46,565 | INFO     | [job] create_data_payload thread has finished
[2025-06-05 04:28:03] 2025-06-04 19:27:46,616 | INFO     | [job] control thread has finished
[2025-06-05 04:28:03] 2025-06-04 19:27:46,819 | INFO     | [data] copytool_out thread has finished
[2025-06-05 04:28:03] 2025-06-04 19:27:47,200 | INFO     | [payload] execute_payloads thread has finished
[2025-06-05 04:28:03] 2025-06-04 19:27:48,897 | INFO     | [data] queue_monitor thread has finished
[2025-06-05 04:28:03] 2025-06-04 19:27:55,836 | INFO     | job.realtimelogging is not enabled
[2025-06-05 04:28:03] 2025-06-04 19:27:56,841 | INFO     | [payload] run_realtimelog thread has finished
[2025-06-05 04:28:03] 2025-06-04 19:27:58,694 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 139708880820032)>', '<ExcThread(monitor, started 139708164204288)>']
[2025-06-05 04:28:03] 2025-06-04 19:27:58,853 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-06-05 04:28:03] 2025-06-04 19:27:58,853 | INFO     | [monitor] control thread has ended
[2025-06-05 04:28:03] 2025-06-04 19:28:03,719 | INFO     | all workflow threads have been joined
[2025-06-05 04:28:03] 2025-06-04 19:28:03,719 | INFO     | end of generic workflow (traces error code: 0)
[2025-06-05 04:28:03] 2025-06-04 19:28:03,719 | INFO     | traces error code: 0
[2025-06-05 04:28:03] 2025-06-04 19:28:03,719 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-06-05 04:28:03] 2025-06-04 19:28:03,769 [wrapper] ==== pilot stdout END ====
[2025-06-05 04:28:03] 2025-06-04 19:28:03,770 [wrapper] ==== wrapper stdout RESUME ====
[2025-06-05 04:28:03] 2025-06-04 19:28:03,771 [wrapper] pilotpid: 2588902
[2025-06-05 04:28:03] 2025-06-04 19:28:03,772 [wrapper] Pilot exit status: 0
[2025-06-05 04:28:03] 2025-06-04 19:28:03,776 [wrapper] pandaids: 6679656731
[2025-06-05 04:28:03] 2025-06-04 19:28:03,790 [wrapper] cleanup supervisor_pilot 2630629 2588903
[2025-06-05 04:28:03] 2025-06-04 19:28:03,791 [wrapper] Test setup, not cleaning
[2025-06-05 04:28:03] 2025-06-04 19:28:03,792 [wrapper] apfmon messages muted
[2025-06-05 04:28:03] 2025-06-04 19:28:03,794 [wrapper] ==== wrapper stdout END ====
[2025-06-05 04:28:03] 2025-06-04 19:28:03,795 [wrapper] ==== wrapper stderr END ====
[2025-06-05 04:28:03]  *** Error codes and diagnostics ***
[2025-06-05 04:28:03]     "exeErrorCode": 0,
[2025-06-05 04:28:03]     "exeErrorDiag": "",
[2025-06-05 04:28:03]     "pilotErrorCode": 0,
[2025-06-05 04:28:03]     "pilotErrorDiag": "",
[2025-06-05 04:28:03]  *** Listing of results directory ***
[2025-06-05 04:28:03] total 386768
[2025-06-05 04:28:03] -rw-r--r--. 1 boinc boinc      5111 Jun  4 20:30 queuedata.json
[2025-06-05 04:28:03] -rw-r--r--. 1 boinc boinc    495897 Jun  4 20:30 pilot3.tar.gz
[2025-06-05 04:28:03] -rwx------. 1 boinc boinc     37140 Jun  4 20:31 runpilot2-wrapper.sh
[2025-06-05 04:28:03] -rw-r--r--. 1 boinc boinc       100 Jun  5 03:23 wrapper_26015_x86_64-pc-linux-gnu
[2025-06-05 04:28:03] -rwxr-xr-x. 1 boinc boinc      7986 Jun  5 03:23 run_atlas
[2025-06-05 04:28:03] -rw-r--r--. 1 boinc boinc       105 Jun  5 03:23 job.xml
[2025-06-05 04:28:03] -rw-r--r--. 2 boinc boinc     15093 Jun  5 03:23 start_atlas.sh
[2025-06-05 04:28:03] drwxrwx--x. 2 boinc boinc        68 Jun  5 03:23 shared
[2025-06-05 04:28:03] -rw-r--r--. 2 boinc boinc    508878 Jun  5 03:23 input.tar.gz
[2025-06-05 04:28:03] -rw-r--r--. 1 boinc boinc      9509 Jun  5 03:23 init_data.xml
[2025-06-05 04:28:03] -rw-r--r--. 2 boinc boinc 215427981 Jun  5 03:23 EVNT.45006593._001305.pool.root.1
[2025-06-05 04:28:03] -rw-r--r--. 1 boinc boinc         0 Jun  5 03:23 boinc_lockfile
[2025-06-05 04:28:03] -rw-r--r--. 1 boinc boinc      2524 Jun  5 03:23 pandaJob.out
[2025-06-05 04:28:03] -rw-------. 1 boinc boinc    990984 Jun  5 03:23 agis_schedconf.cvmfs.json
[2025-06-05 04:28:03] -rw-------. 1 boinc boinc   1598969 Jun  5 03:23 agis_ddmendpoints.agis.ALL.json
[2025-06-05 04:28:03] drwx------. 4 boinc boinc      4096 Jun  5 03:23 pilot3
[2025-06-05 04:28:03] -rw-r--r--. 1 boinc boinc       529 Jun  5 04:27 boinc_task_state.xml
[2025-06-05 04:28:03] -rw-------. 1 boinc boinc 175497859 Jun  5 04:27 HITS.45006595._056579.pool.root.1
[2025-06-05 04:28:03] -rw-------. 1 boinc boinc      1015 Jun  5 04:27 memory_monitor_summary.json
[2025-06-05 04:28:03] -rw-------. 1 boinc boinc    255201 Jun  5 04:27 log.45006595._056579.job.log.tgz.1
[2025-06-05 04:28:03] -rw-------. 1 boinc boinc        95 Jun  5 04:27 pilot_heartbeat.json
[2025-06-05 04:28:03] -rw-r--r--. 1 boinc boinc      8192 Jun  5 04:27 boinc_mmap_file
[2025-06-05 04:28:03] -rw-------. 1 boinc boinc      7658 Jun  5 04:27 heartbeat.json
[2025-06-05 04:28:03] -rw-r--r--. 1 boinc boinc        27 Jun  5 04:27 wrapper_checkpoint.txt
[2025-06-05 04:28:03] -rw-------. 1 boinc boinc      4549 Jun  5 04:28 pilotlog.txt
[2025-06-05 04:28:03] -rw-------. 1 boinc boinc    394953 Jun  5 04:28 log.45006595._056579.job.log.1
[2025-06-05 04:28:03] -rw-------. 1 boinc boinc       357 Jun  5 04:28 output.list
[2025-06-05 04:28:03] -rw-r--r--. 1 boinc boinc       620 Jun  5 04:28 runtime_log
[2025-06-05 04:28:03] -rw-------. 1 boinc boinc    665600 Jun  5 04:28 result.tar.gz
[2025-06-05 04:28:03] -rw-r--r--. 1 boinc boinc      8617 Jun  5 04:28 runtime_log.err
[2025-06-05 04:28:03] -rw-------. 1 boinc boinc       640 Jun  5 04:28 K3bKDmtV1g7n9Rq4apOajLDm4fhM0noT9bVof3QYDmj2aKDmEYRESm.diag
[2025-06-05 04:28:03] -rw-r--r--. 1 boinc boinc     21990 Jun  5 04:28 stderr.txt
[2025-06-05 04:28:03] HITS file was successfully produced:
[2025-06-05 04:28:03] -rw-------. 1 boinc boinc 175497859 Jun  5 04:27 shared/HITS.pool.root.1
[2025-06-05 04:28:03]  *** Contents of shared directory: ***
[2025-06-05 04:28:03] total 382936
[2025-06-05 04:28:03] -rw-r--r--. 2 boinc boinc     15093 Jun  5 03:23 start_atlas.sh
[2025-06-05 04:28:03] -rw-r--r--. 2 boinc boinc    508878 Jun  5 03:23 input.tar.gz
[2025-06-05 04:28:03] -rw-r--r--. 2 boinc boinc 215427981 Jun  5 03:23 ATLAS.root_0
[2025-06-05 04:28:03] -rw-------. 1 boinc boinc 175497859 Jun  5 04:27 HITS.pool.root.1
[2025-06-05 04:28:03] -rw-------. 1 boinc boinc    665600 Jun  5 04:28 result.tar.gz
04:28:05 (2585175): run_atlas exited; CPU time 18871.363083
04:28:05 (2585175): called boinc_finish(0)

</stderr_txt>
]]>

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