Stderr output

<core_client_version>7.20.2</core_client_version>
<![CDATA[
<stderr_txt>
21:40:22 (1449820): wrapper (7.7.26015): starting
21:40:22 (1449820): wrapper: running run_atlas (--nthreads 4)
[2025-06-06 21:40:23] Arguments: --nthreads 4
[2025-06-06 21:40:23] Threads: 4
[2025-06-06 21:40:23] Checking for CVMFS
[2025-06-06 21:40:23] No cvmfs_config command found, will try listing directly
[2025-06-06 21:40:23] CVMFS is ok
[2025-06-06 21:40:23] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-06-06 21:40:23] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2025-06-06 21:40:23] Further information can be found at the LHC@home message board.
[2025-06-06 21:40:23] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-06-06 21:40:23] Checking for apptainer binary...
[2025-06-06 21:40:23] which: no apptainer in ((null))
[2025-06-06 21:40:23] apptainer is not installed, using version from CVMFS
[2025-06-06 21:40:23] Checking apptainer works with /cvmfs/atlas.cern.ch/repo/containers/sw/apptainer/x86_64-el7/current/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-06-06 21:40:23] WARNING: Environment variable TMPDIR already has value [/scratch/boinc/var/slot12/slots/1/.apptainertmp], will not forward new value [/tmp] from parent process environment skurut03.grid.cesnet.cz
[2025-06-06 21:40:23] apptainer works
[2025-06-06 21:40:23] Set ATHENA_PROC_NUMBER=4
[2025-06-06 21:40:23] Set ATHENA_CORE_NUMBER=4
[2025-06-06 21:40:23] Starting ATLAS job with PandaID=6679687442
[2025-06-06 21:40:23] Running command: /cvmfs/atlas.cern.ch/repo/containers/sw/apptainer/x86_64-el7/current/bin/apptainer exec -B /cvmfs,/scratch/boinc/var/slot12/slots/1 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-06-06 22:53:43]  *** The last 200 lines of the pilot log: ***
[2025-06-06 22:53:43]  inputddms=['NDGF-T1_DATADISK', 'CERN-PROD_DATADISK']
[2025-06-06 22:53:43]  is_altstaged=None
[2025-06-06 22:53:43]  is_tar=False
[2025-06-06 22:53:43]  lfn=log.45006595._056624.job.log.tgz.1
[2025-06-06 22:53:43]  mtime=0
[2025-06-06 22:53:43]  protocol_id=None
[2025-06-06 22:53:43]  protocols=[{'endpoint': 'davs://dav.ndgf.org:443', 'flavour': 'WEBDAV', 'id': 331, 'path': '/atlas/disk/atlasdatadisk/rucio/'}]
[2025-06-06 22:53:43]  replicas=None
[2025-06-06 22:53:43]  scope=mc23_13p6TeV
[2025-06-06 22:53:43]  status=None
[2025-06-06 22:53:43]  status_code=0
[2025-06-06 22:53:43]  storage_token=
[2025-06-06 22:53:43]  surl=/scratch/boinc/var/slot12/slots/1/PanDA_Pilot-6679687442/log.45006595._056624.job.log.tgz.1
[2025-06-06 22:53:43]  turl=davs://dav.ndgf.org:443/atlas/disk/atlasdatadisk/rucio/mc23_13p6TeV/09/1a/log.45006595._056624.job.log.tgz.1
[2025-06-06 22:53:43]  workdir=None
[2025-06-06 22:53:43] ]
[2025-06-06 22:53:43] 2025-06-06 20:53:17,427 | INFO     | transferring file log.45006595._056624.job.log.tgz.1 from /scratch/boinc/var/slot12/slots/1/PanDA_Pilot-6679687442/log.45006595._056624.job.log.tgz.1 to /scratch/b
[2025-06-06 22:53:43] 2025-06-06 20:53:17,427 | INFO     | executing command: /usr/bin/env mv /scratch/boinc/var/slot12/slots/1/PanDA_Pilot-6679687442/log.45006595._056624.job.log.tgz.1 /scratch/boinc/var/slot12/slots/1/lo
[2025-06-06 22:53:43] 2025-06-06 20:53:17,438 | INFO     | adding to output.list: log.45006595._056624.job.log.tgz.1 davs://dav.ndgf.org:443/atlas/disk/atlasdatadisk/rucio/mc23_13p6TeV/09/1a/log.45006595._056624.job.log.tg
[2025-06-06 22:53:43] 2025-06-06 20:53:17,438 | INFO     | alt stage-out settings: ['pl', 'write_lan', 'w', 'default'], allow_altstageout=False, remain_files=0, has_altstorage=True
[2025-06-06 22:53:43] 2025-06-06 20:53:17,438 | INFO     | summary of transferred files:
[2025-06-06 22:53:43] 2025-06-06 20:53:17,438 | INFO     |  -- lfn=log.45006595._056624.job.log.tgz.1, status_code=0, status=transferred
[2025-06-06 22:53:43] 2025-06-06 20:53:17,438 | INFO     | stage-out finished correctly
[2025-06-06 22:53:43] 2025-06-06 20:53:17,477 | INFO     | finished stage-out for finished payload, adding job to finished_jobs queue
[2025-06-06 22:53:43] 2025-06-06 20:53:19,525 | INFO     | job 6679687442 has state=finished
[2025-06-06 22:53:43] 2025-06-06 20:53:19,525 | INFO     | preparing for final server update for job 6679687442 in state='finished'
[2025-06-06 22:53:43] 2025-06-06 20:53:19,526 | INFO     | this job has now completed (state=finished)
[2025-06-06 22:53:43] 2025-06-06 20:53:19,526 | INFO     | pilot will not update the server (heartbeat message will be written to file)
[2025-06-06 22:53:43] 2025-06-06 20:53:19,526 | INFO     | log transfer has been attempted: DONE
[2025-06-06 22:53:43] 2025-06-06 20:53:19,526 | INFO     | job 6679687442 has finished - writing final server update
[2025-06-06 22:53:43] 2025-06-06 20:53:19,526 | WARNING  | failed to read HTCondor job classAd: [Errno 2] No such file or directory: '/scratch/condor/execute/dir_1441749/.job.ad'
[2025-06-06 22:53:43] 2025-06-06 20:53:19,526 | INFO     | total number of processed events: 400 (read)
[2025-06-06 22:53:43] 2025-06-06 20:53:19,528 | INFO     | executing command: lscpu
[2025-06-06 22:53:43] 2025-06-06 20:53:19,562 | INFO     | executing command: export ATLAS_LOCAL_ROOT_BASE=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase;source ${ATLAS_LOCAL_ROOT_BASE}/user/atlasLocalSetup.sh --quiet;lsetup
[2025-06-06 22:53:43] 2025-06-06 20:53:22,049 | WARNING  | process 1460981 can no longer be monitored (due to stat problems) - aborting
[2025-06-06 22:53:43] 2025-06-06 20:53:22,050 | INFO     | using path: /scratch/boinc/var/slot12/slots/1/PanDA_Pilot-6679687442/memory_monitor_summary.json (trf name=prmon)
[2025-06-06 22:53:43] 2025-06-06 20:53:22,148 | INFO     | number of running child processes to parent process 1460981: 1
[2025-06-06 22:53:43] 2025-06-06 20:53:22,148 | INFO     | maximum number of monitored processes: 6
[2025-06-06 22:53:43] 2025-06-06 20:53:23,281 | INFO     | CPU arch script returned: x86-64-v4
[2025-06-06 22:53:43] 2025-06-06 20:53:23,281 | INFO     | using path: /scratch/boinc/var/slot12/slots/1/PanDA_Pilot-6679687442/memory_monitor_summary.json (trf name=prmon)
[2025-06-06 22:53:43] 2025-06-06 20:53:23,281 | INFO     | extracted standard info from prmon json
[2025-06-06 22:53:43] 2025-06-06 20:53:23,281 | INFO     | extracted standard memory fields from prmon json
[2025-06-06 22:53:43] 2025-06-06 20:53:23,281 | WARNING  | GPU info not found in prmon json: 'gpu'
[2025-06-06 22:53:43] 2025-06-06 20:53:23,281 | WARNING  | format EVNTtoHITS has no such key: dbData
[2025-06-06 22:53:43] 2025-06-06 20:53:23,282 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2025-06-06 22:53:43] 2025-06-06 20:53:23,282 | INFO     | fitting pss+swap vs Time
[2025-06-06 22:53:43] 2025-06-06 20:53:23,283 | INFO     | sum of square deviations: 85136480.0
[2025-06-06 22:53:43] 2025-06-06 20:53:23,283 | INFO     | sum of deviations: -12791636743.0
[2025-06-06 22:53:43] 2025-06-06 20:53:23,283 | INFO     | mean x: 1749241108.0
[2025-06-06 22:53:43] 2025-06-06 20:53:23,283 | INFO     | mean y: 2574212.6615384617
[2025-06-06 22:53:43] 2025-06-06 20:53:23,283 | INFO     | -- intersect: 262823597931.97473
[2025-06-06 22:53:43] 2025-06-06 20:53:23,283 | INFO     | intersect: 262823597931.97473
[2025-06-06 22:53:43] 2025-06-06 20:53:23,283 | INFO     | chi2: 0.11899546532494606
[2025-06-06 22:53:43] 2025-06-06 20:53:23,283 | INFO     | -- intersect: 262823597931.97473
[2025-06-06 22:53:43] 2025-06-06 20:53:23,283 | INFO     | current memory leak: -150.25 B/s (using 65 data points, chi2=0.12)
[2025-06-06 22:53:43] 2025-06-06 20:53:23,284 | INFO     | ..............................
[2025-06-06 22:53:43] 2025-06-06 20:53:23,284 | INFO     | . Timing measurements:
[2025-06-06 22:53:43] 2025-06-06 20:53:23,284 | INFO     | . get job = 0 s
[2025-06-06 22:53:43] 2025-06-06 20:53:23,284 | INFO     | . initial setup = 1 s
[2025-06-06 22:53:43] 2025-06-06 20:53:23,284 | INFO     | . payload setup = 4 s
[2025-06-06 22:53:43] 2025-06-06 20:53:23,284 | INFO     | . stage-in = 0 s
[2025-06-06 22:53:43] 2025-06-06 20:53:23,284 | INFO     | . payload execution = 4345 s
[2025-06-06 22:53:43] 2025-06-06 20:53:23,284 | INFO     | . stage-out = 0 s
[2025-06-06 22:53:43] 2025-06-06 20:53:23,284 | INFO     | . log creation = 0 s
[2025-06-06 22:53:43] 2025-06-06 20:53:23,284 | INFO     | ..............................
[2025-06-06 22:53:43] 2025-06-06 20:53:23,325 | INFO     | 
[2025-06-06 22:53:43] 2025-06-06 20:53:23,325 | INFO     | job summary report
[2025-06-06 22:53:43] 2025-06-06 20:53:23,325 | INFO     | --------------------------------------------------
[2025-06-06 22:53:43] 2025-06-06 20:53:23,325 | INFO     | PanDA job id: 6679687442
[2025-06-06 22:53:43] 2025-06-06 20:53:23,325 | INFO     | task id: 45006595
[2025-06-06 22:53:43] 2025-06-06 20:53:23,326 | INFO     | errors: (none)
[2025-06-06 22:53:43] 2025-06-06 20:53:23,326 | INFO     | status: LOG_TRANSFER = DONE 
[2025-06-06 22:53:43] 2025-06-06 20:53:23,326 | INFO     | pilot state: finished 
[2025-06-06 22:53:43] 2025-06-06 20:53:23,326 | INFO     | transexitcode: 0
[2025-06-06 22:53:43] 2025-06-06 20:53:23,326 | INFO     | exeerrorcode: 0
[2025-06-06 22:53:43] 2025-06-06 20:53:23,326 | INFO     | exeerrordiag: 
[2025-06-06 22:53:43] 2025-06-06 20:53:23,326 | INFO     | exitcode: 0
[2025-06-06 22:53:43] 2025-06-06 20:53:23,326 | INFO     | exitmsg: OK
[2025-06-06 22:53:43] 2025-06-06 20:53:23,326 | INFO     | cpuconsumptiontime: 16533 s
[2025-06-06 22:53:43] 2025-06-06 20:53:23,326 | INFO     | nevents: 400
[2025-06-06 22:53:43] 2025-06-06 20:53:23,326 | INFO     | neventsw: 0
[2025-06-06 22:53:43] 2025-06-06 20:53:23,326 | INFO     | pid: 1460981
[2025-06-06 22:53:43] 2025-06-06 20:53:23,326 | INFO     | pgrp: 1460981
[2025-06-06 22:53:43] 2025-06-06 20:53:23,326 | INFO     | corecount: 4
[2025-06-06 22:53:43] 2025-06-06 20:53:23,326 | INFO     | event service: False
[2025-06-06 22:53:43] 2025-06-06 20:53:23,326 | INFO     | sizes: {0: 2396457, 1: 2397324, 3: 2397530, 11: 2397558, 4352: 2423652, 4353: 2432799, 4358: 2432913}
[2025-06-06 22:53:43] 2025-06-06 20:53:23,326 | INFO     | --------------------------------------------------
[2025-06-06 22:53:43] 2025-06-06 20:53:23,326 | INFO     | 
[2025-06-06 22:53:43] 2025-06-06 20:53:23,326 | INFO     | executing command: ls -lF /scratch/boinc/var/slot12/slots/1
[2025-06-06 22:53:43] 2025-06-06 20:53:23,338 | INFO     | queue jobs had 0 job(s) [purged]
[2025-06-06 22:53:43] 2025-06-06 20:53:23,338 | INFO     | queue payloads had 0 job(s) [purged]
[2025-06-06 22:53:43] 2025-06-06 20:53:23,338 | INFO     | queue data_in had 0 job(s) [purged]
[2025-06-06 22:53:43] 2025-06-06 20:53:23,338 | INFO     | queue data_out had 0 job(s) [purged]
[2025-06-06 22:53:43] 2025-06-06 20:53:23,338 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-06-06 22:53:43] 2025-06-06 20:53:23,338 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-06-06 22:53:43] 2025-06-06 20:53:23,338 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-06-06 22:53:43] 2025-06-06 20:53:23,338 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-06-06 22:53:43] 2025-06-06 20:53:23,338 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-06-06 22:53:43] 2025-06-06 20:53:23,339 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-06-06 22:53:43] 2025-06-06 20:53:23,339 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-06-06 22:53:43] 2025-06-06 20:53:23,339 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-06-06 22:53:43] 2025-06-06 20:53:23,339 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-06-06 22:53:43] 2025-06-06 20:53:23,339 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-06-06 22:53:43] 2025-06-06 20:53:23,339 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-06-06 22:53:43] 2025-06-06 20:53:23,339 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-06-06 22:53:43] 2025-06-06 20:53:23,339 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-06-06 22:53:43] 2025-06-06 20:53:23,339 | INFO     | queue completed_jobids has 1 job(s)
[2025-06-06 22:53:43] 2025-06-06 20:53:23,339 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-06-06 22:53:43] 2025-06-06 20:53:23,339 | INFO     | queue messages had 0 job(s) [purged]
[2025-06-06 22:53:43] 2025-06-06 20:53:23,339 | INFO     | job 6679687442 has completed (purged errors)
[2025-06-06 22:53:43] 2025-06-06 20:53:23,339 | INFO     | overall cleanup function is called
[2025-06-06 22:53:43] 2025-06-06 20:53:24,095 | INFO     | PID=1453995 has CPU usage=4.9% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i P
[2025-06-06 22:53:43] 2025-06-06 20:53:24,345 | INFO     | --- collectZombieJob: --- 10, [1460981]
[2025-06-06 22:53:43] 2025-06-06 20:53:24,346 | INFO     | zombie collector waiting for pid 1460981
[2025-06-06 22:53:43] 2025-06-06 20:53:24,346 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-06-06 22:53:43] 2025-06-06 20:53:24,346 | INFO     | collected zombie processes
[2025-06-06 22:53:43] 2025-06-06 20:53:24,346 | INFO     | will attempt to kill all subprocesses of pid=1460981
[2025-06-06 22:53:43] 2025-06-06 20:53:24,440 | INFO     | process IDs to be killed: [1460981] (in reverse order)
[2025-06-06 22:53:43] 2025-06-06 20:53:24,482 | WARNING  | found no corresponding commands to process id(s)
[2025-06-06 22:53:43] 2025-06-06 20:53:24,482 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-06-06 22:53:43] 2025-06-06 20:53:24,485 | INFO     | did not find any defunct processes belonging to 1460981
[2025-06-06 22:53:43] 2025-06-06 20:53:24,489 | INFO     | did not find any defunct processes belonging to 1460981
[2025-06-06 22:53:43] 2025-06-06 20:53:24,489 | INFO     | ready for new job
[2025-06-06 22:53:43] 2025-06-06 20:53:24,489 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-06-06 22:53:43] 2025-06-06 20:53:24,490 | INFO     | **************************************
[2025-06-06 22:53:43] 2025-06-06 20:53:24,490 | INFO     | ***  PanDA Pilot version 3.10.2.2  ***
[2025-06-06 22:53:43] 2025-06-06 20:53:24,490 | INFO     | **************************************
[2025-06-06 22:53:43] 2025-06-06 20:53:24,490 | INFO     | 
[2025-06-06 22:53:43] 2025-06-06 20:53:24,492 | INFO     | architecture information:
[2025-06-06 22:53:43] 2025-06-06 20:53:24,492 | INFO     | executing command: cat /etc/os-release
[2025-06-06 22:53:43] 2025-06-06 20:53:24,499 | INFO     | cat /etc/os-release:
[2025-06-06 22:53:43] NAME="CentOS Linux"
[2025-06-06 22:53:43] VERSION="7 (Core)"
[2025-06-06 22:53:43] ID="centos"
[2025-06-06 22:53:43] ID_LIKE="rhel fedora"
[2025-06-06 22:53:43] VERSION_ID="7"
[2025-06-06 22:53:43] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-06-06 22:53:43] ANSI_COLOR="0;31"
[2025-06-06 22:53:43] CPE_NAME="cpe:/o:centos:centos:7"
[2025-06-06 22:53:43] HOME_URL="https://www.centos.org/"
[2025-06-06 22:53:43] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-06-06 22:53:43] 
[2025-06-06 22:53:43] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-06-06 22:53:43] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-06-06 22:53:43] REDHAT_SUPPORT_PRODUCT="centos"
[2025-06-06 22:53:43] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-06-06 22:53:43] 
[2025-06-06 22:53:43] 2025-06-06 20:53:24,499 | INFO     | **************************************
[2025-06-06 22:53:43] 2025-06-06 20:53:25,002 | INFO     | executing command: df -mP /scratch/boinc/var/slot12/slots/1
[2025-06-06 22:53:43] 2025-06-06 20:53:25,011 | INFO     | sufficient remaining disk space (719980593152 B)
[2025-06-06 22:53:43] 2025-06-06 20:53:25,011 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-06-06 22:53:43] 2025-06-06 20:53:25,011 | INFO     | current server update state: UPDATING_FINAL
[2025-06-06 22:53:43] 2025-06-06 20:53:25,011 | INFO     | update_server=False
[2025-06-06 22:53:43] 2025-06-06 20:53:25,011 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-06-06 22:53:43] 2025-06-06 20:53:25,011 | WARNING  | aborting monitor loop since graceful_stop has been set (timing out remaining threads)
[2025-06-06 22:53:43] 2025-06-06 20:53:25,011 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-06-06 22:53:43] 2025-06-06 20:53:25,012 | INFO     | found 0 job(s) in 20 queues
[2025-06-06 22:53:43] 2025-06-06 20:53:25,012 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-06-06 22:53:43] 2025-06-06 20:53:25,012 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-06-06 22:53:43] 2025-06-06 20:53:25,151 | INFO     | all job control threads have been joined
[2025-06-06 22:53:43] 2025-06-06 20:53:25,475 | INFO     | all data control threads have been joined
[2025-06-06 22:53:43] 2025-06-06 20:53:25,487 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-06-06 22:53:43] 2025-06-06 20:53:25,656 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-06-06 22:53:43] 2025-06-06 20:53:25,656 | INFO     | aborting loop
[2025-06-06 22:53:43] 2025-06-06 20:53:26,016 | INFO     | [job] retrieve thread has finished
[2025-06-06 22:53:43] 2025-06-06 20:53:26,017 | INFO     | [job] queue monitor thread has finished
[2025-06-06 22:53:43] 2025-06-06 20:53:26,030 | INFO     | [payload] validate_post thread has finished
[2025-06-06 22:53:43] 2025-06-06 20:53:26,153 | INFO     | all payload control threads have been joined
[2025-06-06 22:53:43] 2025-06-06 20:53:26,156 | INFO     | [job] control thread has finished
[2025-06-06 22:53:43] 2025-06-06 20:53:26,480 | INFO     | [data] control thread has finished
[2025-06-06 22:53:43] 2025-06-06 20:53:26,560 | INFO     | [data] copytool_in thread has finished
[2025-06-06 22:53:43] 2025-06-06 20:53:26,662 | INFO     | [job] job monitor thread has finished
[2025-06-06 22:53:43] 2025-06-06 20:53:26,814 | INFO     | [job] create_data_payload thread has finished
[2025-06-06 22:53:43] 2025-06-06 20:53:26,833 | INFO     | [job] validate thread has finished
[2025-06-06 22:53:43] 2025-06-06 20:53:26,975 | INFO     | [payload] validate_pre thread has finished
[2025-06-06 22:53:43] 2025-06-06 20:53:26,990 | INFO     | [payload] execute_payloads thread has finished
[2025-06-06 22:53:43] 2025-06-06 20:53:27,132 | INFO     | [payload] failed_post thread has finished
[2025-06-06 22:53:43] 2025-06-06 20:53:27,158 | INFO     | [payload] control thread has finished
[2025-06-06 22:53:43] 2025-06-06 20:53:27,493 | INFO     | [data] copytool_out thread has finished
[2025-06-06 22:53:43] 2025-06-06 20:53:28,021 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-06-06 22:53:43] 2025-06-06 20:53:32,027 | INFO     | [data] queue_monitor thread has finished
[2025-06-06 22:53:43] 2025-06-06 20:53:35,666 | INFO     | job.realtimelogging is not enabled
[2025-06-06 22:53:43] 2025-06-06 20:53:36,670 | INFO     | [payload] run_realtimelog thread has finished
[2025-06-06 22:53:43] 2025-06-06 20:53:38,013 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 22474299230016)>', '<ExcThread(monitor, started 22474058065664)>']
[2025-06-06 22:53:43] 2025-06-06 20:53:38,078 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-06-06 22:53:43] 2025-06-06 20:53:38,078 | INFO     | [monitor] control thread has ended
[2025-06-06 22:53:43] 2025-06-06 20:53:43,039 | INFO     | all workflow threads have been joined
[2025-06-06 22:53:43] 2025-06-06 20:53:43,039 | INFO     | end of generic workflow (traces error code: 0)
[2025-06-06 22:53:43] 2025-06-06 20:53:43,039 | INFO     | traces error code: 0
[2025-06-06 22:53:43] 2025-06-06 20:53:43,039 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-06-06 22:53:43] 2025-06-06 20:53:43,104 [wrapper] ==== pilot stdout END ====
[2025-06-06 22:53:43] 2025-06-06 20:53:43,106 [wrapper] ==== wrapper stdout RESUME ====
[2025-06-06 22:53:43] 2025-06-06 20:53:43,107 [wrapper] pilotpid: 1453995
[2025-06-06 22:53:43] 2025-06-06 20:53:43,109 [wrapper] Pilot exit status: 0
[2025-06-06 22:53:43] 2025-06-06 20:53:43,115 [wrapper] pandaids: 6679687442
[2025-06-06 22:53:43] 2025-06-06 20:53:43,142 [wrapper] cleanup supervisor_pilot 1488238 1453996
[2025-06-06 22:53:43] 2025-06-06 20:53:43,144 [wrapper] Test setup, not cleaning
[2025-06-06 22:53:43] 2025-06-06 20:53:43,145 [wrapper] apfmon messages muted
[2025-06-06 22:53:43] 2025-06-06 20:53:43,147 [wrapper] ==== wrapper stdout END ====
[2025-06-06 22:53:43] 2025-06-06 20:53:43,148 [wrapper] ==== wrapper stderr END ====
[2025-06-06 22:53:43]  *** Error codes and diagnostics ***
[2025-06-06 22:53:43]     "exeErrorCode": 0,
[2025-06-06 22:53:43]     "exeErrorDiag": "",
[2025-06-06 22:53:43]     "pilotErrorCode": 0,
[2025-06-06 22:53:43]     "pilotErrorDiag": "",
[2025-06-06 22:53:43]  *** Listing of results directory ***
[2025-06-06 22:53:43] total 398932
[2025-06-06 22:53:43] -rw-r--r-- 1 boinc boinc    495897 Jun  4 14:18 pilot3.tar.gz
[2025-06-06 22:53:43] -rw-r--r-- 1 boinc boinc      5111 Jun  4 14:26 queuedata.json
[2025-06-06 22:53:43] -rwx------ 1 boinc boinc     37140 Jun  4 14:27 runpilot2-wrapper.sh
[2025-06-06 22:53:43] -rw-r--r-- 1 boinc boinc       100 Jun  6 16:06 wrapper_26015_x86_64-pc-linux-gnu
[2025-06-06 22:53:43] -rwxr-xr-x 1 boinc boinc      7986 Jun  6 16:06 run_atlas
[2025-06-06 22:53:43] -rw-r--r-- 1 boinc boinc       105 Jun  6 16:06 job.xml
[2025-06-06 22:53:43] -rw------- 2 boinc boinc  17104896 Jun  6 16:10 copy_vWskFw
[2025-06-06 22:53:43] -rw-r--r-- 2 boinc boinc 214247233 Jun  6 21:40 EVNT.45006593._001815.pool.root.1
[2025-06-06 22:53:43] drwxrwx--x 2 boinc boinc      4096 Jun  6 21:40 shared
[2025-06-06 22:53:43] -rw-r--r-- 2 boinc boinc    508883 Jun  6 21:40 input.tar.gz
[2025-06-06 22:53:43] -rw-r--r-- 2 boinc boinc     15093 Jun  6 21:40 start_atlas.sh
[2025-06-06 22:53:43] -rw-r--r-- 1 boinc boinc         0 Jun  6 21:40 boinc_lockfile
[2025-06-06 22:53:43] -rw-r--r-- 1 boinc boinc      2521 Jun  6 21:40 pandaJob.out
[2025-06-06 22:53:43] -rw------- 1 boinc boinc    985748 Jun  6 21:40 agis_schedconf.cvmfs.json
[2025-06-06 22:53:43] -rw------- 1 boinc boinc   1598969 Jun  6 21:40 agis_ddmendpoints.agis.ALL.json
[2025-06-06 22:53:43] drwx------ 4 boinc boinc      4096 Jun  6 21:40 pilot3
[2025-06-06 22:53:43] -rw-r--r-- 1 boinc boinc      6640 Jun  6 22:06 init_data.xml
[2025-06-06 22:53:43] -rw------- 1 boinc boinc 172014381 Jun  6 22:52 HITS.45006595._056624.pool.root.1
[2025-06-06 22:53:43] -rw-r--r-- 1 boinc boinc       529 Jun  6 22:53 boinc_task_state.xml
[2025-06-06 22:53:43] -rw------- 1 boinc boinc        95 Jun  6 22:53 pilot_heartbeat.json
[2025-06-06 22:53:43] -rw------- 1 boinc boinc      1023 Jun  6 22:53 memory_monitor_summary.json
[2025-06-06 22:53:43] -rw------- 1 boinc boinc    223208 Jun  6 22:53 log.45006595._056624.job.log.tgz.1
[2025-06-06 22:53:43] -rw------- 1 boinc boinc      7712 Jun  6 22:53 heartbeat.json
[2025-06-06 22:53:43] -rw-r--r-- 1 boinc boinc      8192 Jun  6 22:53 boinc_mmap_file
[2025-06-06 22:53:43] -rw-r--r-- 1 boinc boinc        27 Jun  6 22:53 wrapper_checkpoint.txt
[2025-06-06 22:53:43] -rw------- 1 boinc boinc      4558 Jun  6 22:53 pilotlog.txt
[2025-06-06 22:53:43] -rw------- 1 boinc boinc    433160 Jun  6 22:53 log.45006595._056624.job.log.1
[2025-06-06 22:53:43] -rw------- 1 boinc boinc       357 Jun  6 22:53 output.list
[2025-06-06 22:53:43] -rw-r--r-- 1 boinc boinc       620 Jun  6 22:53 runtime_log
[2025-06-06 22:53:43] -rw------- 1 boinc boinc    675840 Jun  6 22:53 result.tar.gz
[2025-06-06 22:53:43] -rw-r--r-- 1 boinc boinc      9025 Jun  6 22:53 runtime_log.err
[2025-06-06 22:53:43] -rw------- 1 boinc boinc       659 Jun  6 22:53 a5MMDmbO2g7n9Rq4apOajLDm4fhM0noT9bVof3QYDm32aKDmoqMaGo.diag
[2025-06-06 22:53:43] -rw-r--r-- 1 boinc boinc     21316 Jun  6 22:53 stderr.txt
[2025-06-06 22:53:43] HITS file was successfully produced:
[2025-06-06 22:53:43] -rw------- 1 boinc boinc 172014381 Jun  6 22:52 shared/HITS.pool.root.1
[2025-06-06 22:53:43]  *** Contents of shared directory: ***
[2025-06-06 22:53:43] total 395096
[2025-06-06 22:53:43] -rw------- 2 boinc boinc  17104896 Jun  6 16:10 copy_vWskFw
[2025-06-06 22:53:43] -rw-r--r-- 2 boinc boinc 214247233 Jun  6 21:40 ATLAS.root_0
[2025-06-06 22:53:43] -rw-r--r-- 2 boinc boinc    508883 Jun  6 21:40 input.tar.gz
[2025-06-06 22:53:43] -rw-r--r-- 2 boinc boinc     15093 Jun  6 21:40 start_atlas.sh
[2025-06-06 22:53:43] -rw------- 1 boinc boinc 172014381 Jun  6 22:52 HITS.pool.root.1
[2025-06-06 22:53:43] -rw------- 1 boinc boinc    675840 Jun  6 22:53 result.tar.gz
22:53:45 (1449820): run_atlas exited; CPU time 16577.497664
22:53:45 (1449820): called boinc_finish(0)

</stderr_txt>
]]>

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