Stderr output

<core_client_version>8.0.4</core_client_version>
<![CDATA[
<stderr_txt>
00:24:25 (244369): wrapper (7.7.26015): starting
00:24:25 (244369): wrapper: running run_atlas (--nthreads 2)
[2025-06-05 00:24:25] Arguments: --nthreads 2
[2025-06-05 00:24:25] Threads: 2
[2025-06-05 00:24:25] Checking for CVMFS
[2025-06-05 00:24:25] Probing /cvmfs/atlas.cern.ch... OK
[2025-06-05 00:24:25] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-06-05 00:24:25] Running cvmfs_config stat atlas.cern.ch
[2025-06-05 00:24:25] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-06-05 00:24:25] 2.9.2.0 3009 998 58792 146797 3 55 35606689 36864000 0 130560 0 651927 99.990 238057 64918 http://cvmfs-stratum-one.cern.ch:8000/cvmfs/atlas.cern.ch http://130.183.36.13:3128 1
[2025-06-05 00:24:25] CVMFS is ok
[2025-06-05 00:24:25] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-06-05 00:24:25] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2025-06-05 00:24:25] Further information can be found at the LHC@home message board.
[2025-06-05 00:24:25] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-06-05 00:24:25] Checking for apptainer binary...
[2025-06-05 00:24:25] Using apptainer found in PATH at /usr/bin/apptainer
[2025-06-05 00:24:25] Running /usr/bin/apptainer --version
[2025-06-05 00:24:25] apptainer version 1.3.6-6.1
[2025-06-05 00:24:25] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-06-05 00:24:25] magicA244
[2025-06-05 00:24:25] apptainer works
[2025-06-05 00:24:25] Set ATHENA_PROC_NUMBER=2
[2025-06-05 00:24:25] Set ATHENA_CORE_NUMBER=2
[2025-06-05 00:24:25] Starting ATLAS job with PandaID=6679711782
[2025-06-05 00:24:25] Running command: /usr/bin/apptainer exec -B /cvmfs,/local/data/boinc/slots/0 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-06-05 02:14:45]  *** The last 200 lines of the pilot log: ***
[2025-06-05 02:14:45] 2025-06-05 00:14:18,833 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-06-05 02:14:45] 2025-06-05 00:14:21,337 | INFO     | monitor loop #509: job 0:6679711782 is in state 'finished'
[2025-06-05 02:14:45] 2025-06-05 00:14:21,338 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-06-05 02:14:45] 2025-06-05 00:14:23,221 | INFO     | PID=247988 has CPU usage=2.7% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i PR
[2025-06-05 02:14:45] 2025-06-05 00:14:23,840 | INFO     | monitor loop #510: job 0:6679711782 is in state 'finished'
[2025-06-05 02:14:45] 2025-06-05 00:14:23,841 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-06-05 02:14:45] 2025-06-05 00:14:25,753 | INFO     | CPU arch script returned: x86-64-v3
[2025-06-05 02:14:45] 2025-06-05 00:14:25,753 | INFO     | using path: /local/data/boinc/slots/0/PanDA_Pilot-6679711782/memory_monitor_summary.json (trf name=prmon)
[2025-06-05 02:14:45] 2025-06-05 00:14:25,753 | INFO     | extracted standard info from prmon json
[2025-06-05 02:14:45] 2025-06-05 00:14:25,753 | INFO     | extracted standard memory fields from prmon json
[2025-06-05 02:14:45] 2025-06-05 00:14:25,753 | WARNING  | GPU info not found in prmon json: 'gpu'
[2025-06-05 02:14:45] 2025-06-05 00:14:25,754 | WARNING  | format EVNTtoHITS has no such key: dbData
[2025-06-05 02:14:45] 2025-06-05 00:14:25,754 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2025-06-05 02:14:45] 2025-06-05 00:14:25,754 | INFO     | fitting pss+swap vs Time
[2025-06-05 02:14:45] 2025-06-05 00:14:25,754 | INFO     | sum of square deviations: 390582207.0
[2025-06-05 02:14:45] 2025-06-05 00:14:25,755 | INFO     | sum of deviations: -6489163713.0
[2025-06-05 02:14:45] 2025-06-05 00:14:25,755 | INFO     | mean x: 1749079171.5
[2025-06-05 02:14:45] 2025-06-05 00:14:25,755 | INFO     | mean y: 2369638.611111111
[2025-06-05 02:14:45] 2025-06-05 00:14:25,755 | INFO     | -- intersect: 29061709484.222416
[2025-06-05 02:14:45] 2025-06-05 00:14:25,755 | INFO     | intersect: 29061709484.222416
[2025-06-05 02:14:45] 2025-06-05 00:14:25,755 | INFO     | chi2: 1.5669094197822762
[2025-06-05 02:14:45] 2025-06-05 00:14:25,755 | INFO     | sum of square deviations: 338804492.0
[2025-06-05 02:14:45] 2025-06-05 00:14:25,755 | INFO     | sum of deviations: -5498128311.0
[2025-06-05 02:14:45] 2025-06-05 00:14:25,755 | INFO     | mean x: 1749079019.0
[2025-06-05 02:14:45] 2025-06-05 00:14:25,755 | INFO     | mean y: 2372561.0291262134
[2025-06-05 02:14:45] 2025-06-05 00:14:25,755 | INFO     | -- intersect: 28386473420.412086
[2025-06-05 02:14:45] 2025-06-05 00:14:25,755 | INFO     | intersect: 28386473420.412086
[2025-06-05 02:14:45] 2025-06-05 00:14:25,755 | INFO     | chi2: 1.5677700289567784
[2025-06-05 02:14:45] 2025-06-05 00:14:25,755 | INFO     | current chi2=1.5677700289567784 (change=-0.05492399009394179 %)
[2025-06-05 02:14:45] 2025-06-05 00:14:25,755 | INFO     | right removable region: 102
[2025-06-05 02:14:45] 2025-06-05 00:14:25,756 | INFO     | sum of square deviations: 338804492.0
[2025-06-05 02:14:45] 2025-06-05 00:14:25,756 | INFO     | sum of deviations: -19664584457.0
[2025-06-05 02:14:45] 2025-06-05 00:14:25,756 | INFO     | mean x: 1749079324.0
[2025-06-05 02:14:45] 2025-06-05 00:14:25,756 | INFO     | mean y: 2407331.281553398
[2025-06-05 02:14:45] 2025-06-05 00:14:25,756 | INFO     | -- intersect: 101520890412.05035
[2025-06-05 02:14:45] 2025-06-05 00:14:25,756 | INFO     | intersect: 101520890412.05035
[2025-06-05 02:14:45] 2025-06-05 00:14:25,756 | INFO     | chi2: 0.09045076225585394
[2025-06-05 02:14:45] 2025-06-05 00:14:25,756 | INFO     | current chi2=0.09045076225585394 (change=94.22744154104184 %)
[2025-06-05 02:14:45] 2025-06-05 00:14:25,756 | INFO     | sum of square deviations: 291817564.5
[2025-06-05 02:14:45] 2025-06-05 00:14:25,756 | INFO     | sum of deviations: -17630243515.5
[2025-06-05 02:14:45] 2025-06-05 00:14:25,756 | INFO     | mean x: 1749079476.5
[2025-06-05 02:14:45] 2025-06-05 00:14:25,756 | INFO     | mean y: 2400724.6224489794
[2025-06-05 02:14:45] 2025-06-05 00:14:25,756 | INFO     | -- intersect: 105673548900.68866
[2025-06-05 02:14:45] 2025-06-05 00:14:25,756 | INFO     | intersect: 105673548900.68866
[2025-06-05 02:14:45] 2025-06-05 00:14:25,756 | INFO     | chi2: 0.08867940142819492
[2025-06-05 02:14:45] 2025-06-05 00:14:25,756 | INFO     | current chi2=0.08867940142819492 (change=1.9583702596650945 %)
[2025-06-05 02:14:45] 2025-06-05 00:14:25,756 | INFO     | left removable region: 20
[2025-06-05 02:14:45] 2025-06-05 00:14:25,757 | INFO     | sum of square deviations: 170944600.5
[2025-06-05 02:14:45] 2025-06-05 00:14:25,757 | INFO     | sum of deviations: -12028450127.000002
[2025-06-05 02:14:45] 2025-06-05 00:14:25,757 | INFO     | mean x: 1749079598.5
[2025-06-05 02:14:45] 2025-06-05 00:14:25,757 | INFO     | mean y: 2389439.975609756
[2025-06-05 02:14:45] 2025-06-05 00:14:25,757 | INFO     | -- intersect: 123075693055.14558
[2025-06-05 02:14:45] 2025-06-05 00:14:25,757 | INFO     | intersect: 123075693055.14558
[2025-06-05 02:14:45] 2025-06-05 00:14:25,757 | INFO     | chi2: 0.07872795490949298
[2025-06-05 02:14:45] 2025-06-05 00:14:25,757 | INFO     | -- intersect: 123075693055.14558
[2025-06-05 02:14:45] 2025-06-05 00:14:25,757 | INFO     | current memory leak: -70.36 B/s (using 82 data points, chi2=0.08)
[2025-06-05 02:14:45] 2025-06-05 00:14:25,757 | INFO     | ..............................
[2025-06-05 02:14:45] 2025-06-05 00:14:25,757 | INFO     | . Timing measurements:
[2025-06-05 02:14:45] 2025-06-05 00:14:25,757 | INFO     | . get job = 0 s
[2025-06-05 02:14:45] 2025-06-05 00:14:25,757 | INFO     | . initial setup = 1 s
[2025-06-05 02:14:45] 2025-06-05 00:14:25,757 | INFO     | . payload setup = 7 s
[2025-06-05 02:14:45] 2025-06-05 00:14:25,757 | INFO     | . stage-in = 0 s
[2025-06-05 02:14:45] 2025-06-05 00:14:25,757 | INFO     | . payload execution = 6545 s
[2025-06-05 02:14:45] 2025-06-05 00:14:25,757 | INFO     | . stage-out = 0 s
[2025-06-05 02:14:45] 2025-06-05 00:14:25,757 | INFO     | . log creation = 0 s
[2025-06-05 02:14:45] 2025-06-05 00:14:25,757 | INFO     | ..............................
[2025-06-05 02:14:45] 2025-06-05 00:14:26,166 | INFO     | 
[2025-06-05 02:14:45] 2025-06-05 00:14:26,166 | INFO     | job summary report
[2025-06-05 02:14:45] 2025-06-05 00:14:26,166 | INFO     | --------------------------------------------------
[2025-06-05 02:14:45] 2025-06-05 00:14:26,166 | INFO     | PanDA job id: 6679711782
[2025-06-05 02:14:45] 2025-06-05 00:14:26,166 | INFO     | task id: 45006595
[2025-06-05 02:14:45] 2025-06-05 00:14:26,167 | INFO     | errors: (none)
[2025-06-05 02:14:45] 2025-06-05 00:14:26,167 | INFO     | status: LOG_TRANSFER = DONE 
[2025-06-05 02:14:45] 2025-06-05 00:14:26,167 | INFO     | pilot state: finished 
[2025-06-05 02:14:45] 2025-06-05 00:14:26,167 | INFO     | transexitcode: 0
[2025-06-05 02:14:45] 2025-06-05 00:14:26,167 | INFO     | exeerrorcode: 0
[2025-06-05 02:14:45] 2025-06-05 00:14:26,167 | INFO     | exeerrordiag: 
[2025-06-05 02:14:45] 2025-06-05 00:14:26,167 | INFO     | exitcode: 0
[2025-06-05 02:14:45] 2025-06-05 00:14:26,168 | INFO     | exitmsg: OK
[2025-06-05 02:14:45] 2025-06-05 00:14:26,168 | INFO     | cpuconsumptiontime: 12747 s
[2025-06-05 02:14:45] 2025-06-05 00:14:26,168 | INFO     | nevents: 400
[2025-06-05 02:14:45] 2025-06-05 00:14:26,168 | INFO     | neventsw: 0
[2025-06-05 02:14:45] 2025-06-05 00:14:26,168 | INFO     | pid: 254452
[2025-06-05 02:14:45] 2025-06-05 00:14:26,168 | INFO     | pgrp: 254452
[2025-06-05 02:14:45] 2025-06-05 00:14:26,168 | INFO     | corecount: 2
[2025-06-05 02:14:45] 2025-06-05 00:14:26,169 | INFO     | event service: False
[2025-06-05 02:14:45] 2025-06-05 00:14:26,169 | INFO     | sizes: {0: 2397292, 7: 2397498, 11: 2397526, 6556: 2424565, 6557: 2433567, 6568: 2433681}
[2025-06-05 02:14:45] 2025-06-05 00:14:26,169 | INFO     | --------------------------------------------------
[2025-06-05 02:14:45] 2025-06-05 00:14:26,169 | INFO     | 
[2025-06-05 02:14:45] 2025-06-05 00:14:26,169 | INFO     | executing command: ls -lF /local/data/boinc/slots/0
[2025-06-05 02:14:45] 2025-06-05 00:14:26,181 | INFO     | queue jobs had 0 job(s) [purged]
[2025-06-05 02:14:45] 2025-06-05 00:14:26,181 | INFO     | queue payloads had 0 job(s) [purged]
[2025-06-05 02:14:45] 2025-06-05 00:14:26,181 | INFO     | queue data_in had 0 job(s) [purged]
[2025-06-05 02:14:45] 2025-06-05 00:14:26,181 | INFO     | queue data_out had 0 job(s) [purged]
[2025-06-05 02:14:45] 2025-06-05 00:14:26,181 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-06-05 02:14:45] 2025-06-05 00:14:26,182 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-06-05 02:14:45] 2025-06-05 00:14:26,182 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-06-05 02:14:45] 2025-06-05 00:14:26,182 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-06-05 02:14:45] 2025-06-05 00:14:26,182 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-06-05 02:14:45] 2025-06-05 00:14:26,182 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-06-05 02:14:45] 2025-06-05 00:14:26,182 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-06-05 02:14:45] 2025-06-05 00:14:26,182 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-06-05 02:14:45] 2025-06-05 00:14:26,182 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-06-05 02:14:45] 2025-06-05 00:14:26,182 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-06-05 02:14:45] 2025-06-05 00:14:26,182 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-06-05 02:14:45] 2025-06-05 00:14:26,182 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-06-05 02:14:45] 2025-06-05 00:14:26,182 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-06-05 02:14:45] 2025-06-05 00:14:26,182 | INFO     | queue completed_jobids has 1 job(s)
[2025-06-05 02:14:45] 2025-06-05 00:14:26,182 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-06-05 02:14:45] 2025-06-05 00:14:26,182 | INFO     | queue messages had 0 job(s) [purged]
[2025-06-05 02:14:45] 2025-06-05 00:14:26,182 | INFO     | job 6679711782 has completed (purged errors)
[2025-06-05 02:14:45] 2025-06-05 00:14:26,182 | INFO     | overall cleanup function is called
[2025-06-05 02:14:45] 2025-06-05 00:14:27,188 | INFO     | --- collectZombieJob: --- 10, [254452]
[2025-06-05 02:14:45] 2025-06-05 00:14:27,189 | INFO     | zombie collector waiting for pid 254452
[2025-06-05 02:14:45] 2025-06-05 00:14:27,189 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-06-05 02:14:45] 2025-06-05 00:14:27,189 | INFO     | collected zombie processes
[2025-06-05 02:14:45] 2025-06-05 00:14:27,189 | INFO     | will attempt to kill all subprocesses of pid=254452
[2025-06-05 02:14:45] 2025-06-05 00:14:27,223 | INFO     | process IDs to be killed: [254452] (in reverse order)
[2025-06-05 02:14:45] 2025-06-05 00:14:27,245 | WARNING  | found no corresponding commands to process id(s)
[2025-06-05 02:14:45] 2025-06-05 00:14:27,245 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-06-05 02:14:45] 2025-06-05 00:14:27,246 | INFO     | did not find any defunct processes belonging to 254452
[2025-06-05 02:14:45] 2025-06-05 00:14:27,246 | INFO     | did not find any defunct processes belonging to 254452
[2025-06-05 02:14:45] 2025-06-05 00:14:27,246 | INFO     | ready for new job
[2025-06-05 02:14:45] 2025-06-05 00:14:27,246 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-06-05 02:14:45] 2025-06-05 00:14:27,247 | INFO     | **************************************
[2025-06-05 02:14:45] 2025-06-05 00:14:27,247 | INFO     | ***  PanDA Pilot version 3.10.2.2  ***
[2025-06-05 02:14:45] 2025-06-05 00:14:27,247 | INFO     | **************************************
[2025-06-05 02:14:45] 2025-06-05 00:14:27,247 | INFO     | 
[2025-06-05 02:14:45] 2025-06-05 00:14:27,247 | INFO     | architecture information:
[2025-06-05 02:14:45] 2025-06-05 00:14:27,247 | INFO     | executing command: cat /etc/os-release
[2025-06-05 02:14:45] 2025-06-05 00:14:27,256 | INFO     | cat /etc/os-release:
[2025-06-05 02:14:45] NAME="CentOS Linux"
[2025-06-05 02:14:45] VERSION="7 (Core)"
[2025-06-05 02:14:45] ID="centos"
[2025-06-05 02:14:45] ID_LIKE="rhel fedora"
[2025-06-05 02:14:45] VERSION_ID="7"
[2025-06-05 02:14:45] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-06-05 02:14:45] ANSI_COLOR="0;31"
[2025-06-05 02:14:45] CPE_NAME="cpe:/o:centos:centos:7"
[2025-06-05 02:14:45] HOME_URL="https://www.centos.org/"
[2025-06-05 02:14:45] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-06-05 02:14:45] 
[2025-06-05 02:14:45] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-06-05 02:14:45] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-06-05 02:14:45] REDHAT_SUPPORT_PRODUCT="centos"
[2025-06-05 02:14:45] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-06-05 02:14:45] 
[2025-06-05 02:14:45] 2025-06-05 00:14:27,256 | INFO     | **************************************
[2025-06-05 02:14:45] 2025-06-05 00:14:27,760 | INFO     | executing command: df -mP /local/data/boinc/slots/0
[2025-06-05 02:14:45] 2025-06-05 00:14:27,773 | INFO     | sufficient remaining disk space (484766121984 B)
[2025-06-05 02:14:45] 2025-06-05 00:14:27,773 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-06-05 02:14:45] 2025-06-05 00:14:27,773 | INFO     | current server update state: UPDATING_FINAL
[2025-06-05 02:14:45] 2025-06-05 00:14:27,773 | INFO     | update_server=False
[2025-06-05 02:14:45] 2025-06-05 00:14:27,773 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-06-05 02:14:45] 2025-06-05 00:14:27,773 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-06-05 02:14:45] 2025-06-05 00:14:27,773 | INFO     | aborting loop
[2025-06-05 02:14:45] 2025-06-05 00:14:27,773 | WARNING  | aborting monitor loop since graceful_stop has been set (timing out remaining threads)
[2025-06-05 02:14:45] 2025-06-05 00:14:27,773 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-06-05 02:14:45] 2025-06-05 00:14:27,773 | INFO     | found 0 job(s) in 20 queues
[2025-06-05 02:14:45] 2025-06-05 00:14:27,773 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-06-05 02:14:45] 2025-06-05 00:14:27,773 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-06-05 02:14:45] 2025-06-05 00:14:28,051 | INFO     | all job control threads have been joined
[2025-06-05 02:14:45] 2025-06-05 00:14:28,071 | INFO     | all data control threads have been joined
[2025-06-05 02:14:45] 2025-06-05 00:14:28,337 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-06-05 02:14:45] 2025-06-05 00:14:28,505 | INFO     | all payload control threads have been joined
[2025-06-05 02:14:45] 2025-06-05 00:14:28,775 | INFO     | [job] retrieve thread has finished
[2025-06-05 02:14:45] 2025-06-05 00:14:28,778 | INFO     | [job] job monitor thread has finished
[2025-06-05 02:14:45] 2025-06-05 00:14:28,779 | INFO     | [job] queue monitor thread has finished
[2025-06-05 02:14:45] 2025-06-05 00:14:28,853 | INFO     | [payload] validate_post thread has finished
[2025-06-05 02:14:45] 2025-06-05 00:14:28,966 | INFO     | [payload] execute_payloads thread has finished
[2025-06-05 02:14:45] 2025-06-05 00:14:29,057 | INFO     | [job] control thread has finished
[2025-06-05 02:14:45] 2025-06-05 00:14:29,077 | INFO     | [data] control thread has finished
[2025-06-05 02:14:45] 2025-06-05 00:14:29,511 | INFO     | [payload] control thread has finished
[2025-06-05 02:14:45] 2025-06-05 00:14:29,882 | INFO     | [payload] failed_post thread has finished
[2025-06-05 02:14:45] 2025-06-05 00:14:30,034 | INFO     | [data] copytool_in thread has finished
[2025-06-05 02:14:45] 2025-06-05 00:14:30,165 | INFO     | [job] validate thread has finished
[2025-06-05 02:14:45] 2025-06-05 00:14:30,175 | INFO     | [job] create_data_payload thread has finished
[2025-06-05 02:14:45] 2025-06-05 00:14:30,209 | INFO     | [payload] validate_pre thread has finished
[2025-06-05 02:14:45] 2025-06-05 00:14:30,344 | INFO     | [data] copytool_out thread has finished
[2025-06-05 02:14:45] 2025-06-05 00:14:30,415 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-06-05 02:14:45] 2025-06-05 00:14:34,423 | INFO     | [data] queue_monitor thread has finished
[2025-06-05 02:14:45] 2025-06-05 00:14:38,592 | INFO     | job.realtimelogging is not enabled
[2025-06-05 02:14:45] 2025-06-05 00:14:39,597 | INFO     | [payload] run_realtimelog thread has finished
[2025-06-05 02:14:45] 2025-06-05 00:14:39,947 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 139735912335168)>', '<ExcThread(monitor, started 139735276185344)>']
[2025-06-05 02:14:45] 2025-06-05 00:14:40,840 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-06-05 02:14:45] 2025-06-05 00:14:40,840 | INFO     | [monitor] control thread has ended
[2025-06-05 02:14:45] 2025-06-05 00:14:44,951 | INFO     | all workflow threads have been joined
[2025-06-05 02:14:45] 2025-06-05 00:14:44,951 | INFO     | end of generic workflow (traces error code: 0)
[2025-06-05 02:14:45] 2025-06-05 00:14:44,951 | INFO     | traces error code: 0
[2025-06-05 02:14:45] 2025-06-05 00:14:44,952 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-06-05 02:14:45] 2025-06-05 00:14:44,997 [wrapper] ==== pilot stdout END ====
[2025-06-05 02:14:45] 2025-06-05 00:14:45,000 [wrapper] ==== wrapper stdout RESUME ====
[2025-06-05 02:14:45] 2025-06-05 00:14:45,002 [wrapper] pilotpid: 247988
[2025-06-05 02:14:45] 2025-06-05 00:14:45,004 [wrapper] Pilot exit status: 0
[2025-06-05 02:14:45] 2025-06-05 00:14:45,010 [wrapper] pandaids: 6679711782
[2025-06-05 02:14:45] 2025-06-05 00:14:45,023 [wrapper] cleanup supervisor_pilot  268482 247989
[2025-06-05 02:14:45] 2025-06-05 00:14:45,026 [wrapper] Test setup, not cleaning
[2025-06-05 02:14:45] 2025-06-05 00:14:45,029 [wrapper] apfmon messages muted
[2025-06-05 02:14:45] 2025-06-05 00:14:45,031 [wrapper] ==== wrapper stdout END ====
[2025-06-05 02:14:45] 2025-06-05 00:14:45,033 [wrapper] ==== wrapper stderr END ====
[2025-06-05 02:14:45]  *** Error codes and diagnostics ***
[2025-06-05 02:14:45]     "exeErrorCode": 0,
[2025-06-05 02:14:45]     "exeErrorDiag": "",
[2025-06-05 02:14:45]     "pilotErrorCode": 0,
[2025-06-05 02:14:45]     "pilotErrorDiag": "",
[2025-06-05 02:14:45]  *** Listing of results directory ***
[2025-06-05 02:14:45] total 394340
[2025-06-05 02:14:45] -rw-r--r-- 1 boinc boinc    495897 Jun  4 14:39 pilot3.tar.gz
[2025-06-05 02:14:45] -rw-r--r-- 1 boinc boinc      5111 Jun  4 15:04 queuedata.json
[2025-06-05 02:14:45] -rwx------ 1 boinc boinc     37140 Jun  4 15:07 runpilot2-wrapper.sh
[2025-06-05 02:14:45] -rw-r--r-- 1 boinc boinc       100 Jun  5 00:24 wrapper_26015_x86_64-pc-linux-gnu
[2025-06-05 02:14:45] -rwxr-xr-x 1 boinc boinc      7986 Jun  5 00:24 run_atlas
[2025-06-05 02:14:45] -rw-r--r-- 1 boinc boinc       105 Jun  5 00:24 job.xml
[2025-06-05 02:14:45] -rw-r--r-- 2 boinc boinc 217084415 Jun  5 00:24 EVNT.45006593._001736.pool.root.1
[2025-06-05 02:14:45] -rw-r--r-- 1 boinc boinc      6692 Jun  5 00:24 init_data.xml
[2025-06-05 02:14:45] drwxrwx--x 2 boinc boinc      4096 Jun  5 00:24 shared
[2025-06-05 02:14:45] -rw-r--r-- 2 boinc boinc    508881 Jun  5 00:24 input.tar.gz
[2025-06-05 02:14:45] -rw-r--r-- 2 boinc boinc     15093 Jun  5 00:24 start_atlas.sh
[2025-06-05 02:14:45] -rw-r--r-- 1 boinc boinc         0 Jun  5 00:24 boinc_lockfile
[2025-06-05 02:14:45] -rw-r--r-- 1 boinc boinc      2523 Jun  5 00:24 pandaJob.out
[2025-06-05 02:14:45] -rw------- 1 boinc boinc    987032 Jun  5 00:24 agis_schedconf.cvmfs.json
[2025-06-05 02:14:45] -rw------- 1 boinc boinc   1598969 Jun  5 00:24 agis_ddmendpoints.agis.ALL.json
[2025-06-05 02:14:45] drwx------ 4 boinc boinc      4096 Jun  5 00:24 pilot3
[2025-06-05 02:14:45] -rw------- 1 boinc boinc 181200482 Jun  5 02:13 HITS.45006595._056650.pool.root.1
[2025-06-05 02:14:45] -rw-r--r-- 1 boinc boinc       530 Jun  5 02:14 boinc_task_state.xml
[2025-06-05 02:14:45] -rw------- 1 boinc boinc        95 Jun  5 02:14 pilot_heartbeat.json
[2025-06-05 02:14:45] -rw------- 1 boinc boinc      1026 Jun  5 02:14 memory_monitor_summary.json
[2025-06-05 02:14:45] -rw------- 1 boinc boinc    218426 Jun  5 02:14 log.45006595._056650.job.log.tgz.1
[2025-06-05 02:14:45] -rw------- 1 boinc boinc      7672 Jun  5 02:14 heartbeat.json
[2025-06-05 02:14:45] -rw-r--r-- 1 boinc boinc      8192 Jun  5 02:14 boinc_mmap_file
[2025-06-05 02:14:45] -rw-r--r-- 1 boinc boinc        27 Jun  5 02:14 wrapper_checkpoint.txt
[2025-06-05 02:14:45] -rw------- 1 boinc boinc      4552 Jun  5 02:14 pilotlog.txt
[2025-06-05 02:14:45] -rw------- 1 boinc boinc    624892 Jun  5 02:14 log.45006595._056650.job.log.1
[2025-06-05 02:14:45] -rw------- 1 boinc boinc       357 Jun  5 02:14 output.list
[2025-06-05 02:14:45] -rw-r--r-- 1 boinc boinc       620 Jun  5 02:14 runtime_log
[2025-06-05 02:14:45] -rw------- 1 boinc boinc    860160 Jun  5 02:14 result.tar.gz
[2025-06-05 02:14:45] -rw-r--r-- 1 boinc boinc      8748 Jun  5 02:14 runtime_log.err
[2025-06-05 02:14:45] -rw------- 1 boinc boinc       662 Jun  5 02:14 nn4KDm602g7nsSi4ap6QjLDmwznN0nGgGQJmUXzaDm8ynKDmbpmGTn.diag
[2025-06-05 02:14:45] -rw-r--r-- 1 boinc boinc     21124 Jun  5 02:14 stderr.txt
[2025-06-05 02:14:45] HITS file was successfully produced:
[2025-06-05 02:14:45] -rw------- 1 boinc boinc 181200482 Jun  5 02:13 shared/HITS.pool.root.1
[2025-06-05 02:14:45]  *** Contents of shared directory: ***
[2025-06-05 02:14:45] total 390320
[2025-06-05 02:14:45] -rw-r--r-- 2 boinc boinc 217084415 Jun  5 00:24 ATLAS.root_0
[2025-06-05 02:14:45] -rw-r--r-- 2 boinc boinc    508881 Jun  5 00:24 input.tar.gz
[2025-06-05 02:14:45] -rw-r--r-- 2 boinc boinc     15093 Jun  5 00:24 start_atlas.sh
[2025-06-05 02:14:45] -rw------- 1 boinc boinc 181200482 Jun  5 02:13 HITS.pool.root.1
[2025-06-05 02:14:45] -rw------- 1 boinc boinc    860160 Jun  5 02:14 result.tar.gz
02:14:46 (244369): run_atlas exited; CPU time 12773.914207
02:14:46 (244369): called boinc_finish(0)

</stderr_txt>
]]>

©2025 CERN