Stderr output

<core_client_version>8.0.4</core_client_version>
<![CDATA[
<stderr_txt>
09:17:24 (900521): wrapper (7.7.26015): starting
09:17:24 (900521): wrapper: running run_atlas (--nthreads 12)
[2025-06-06 09:17:24] Arguments: --nthreads 12
[2025-06-06 09:17:24] Threads: 12
[2025-06-06 09:17:24] Checking for CVMFS
[2025-06-06 09:17:24] Probing /cvmfs/atlas.cern.ch... OK
[2025-06-06 09:17:24] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-06-06 09:17:24] Running cvmfs_config stat atlas.cern.ch
[2025-06-06 09:17:24] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-06-06 09:17:24] 2.12.7.0 4529 2158 45852 146847 1 186 2572251 4096001 868 130560 0 2507270 99.994 479769 140 http://s1ral-cvmfs.openhtc.io/cvmfs/atlas.cern.ch DIRECT 1
[2025-06-06 09:17:24] CVMFS is ok
[2025-06-06 09:17:24] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-06-06 09:17:24] Small home clusters do not require a local http proxy but it is suggested if
[2025-06-06 09:17:24] more than 10 cores throughout the same LAN segment are regularly running ATLAS like tasks.
[2025-06-06 09:17:24] Further information can be found at the LHC@home message board.
[2025-06-06 09:17:24] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-06-06 09:17:24] Checking for apptainer binary...
[2025-06-06 09:17:24] apptainer is not installed, using version from CVMFS
[2025-06-06 09:17:24] Checking apptainer works with /cvmfs/atlas.cern.ch/repo/containers/sw/apptainer/x86_64-el7/current/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-06-06 09:17:24] martinpcalt
[2025-06-06 09:17:24] apptainer works
[2025-06-06 09:17:24] Set ATHENA_PROC_NUMBER=12
[2025-06-06 09:17:24] Set ATHENA_CORE_NUMBER=12
[2025-06-06 09:17:24] Starting ATLAS job with PandaID=6679702574
[2025-06-06 09:17:24] Running command: /cvmfs/atlas.cern.ch/repo/containers/sw/apptainer/x86_64-el7/current/bin/apptainer exec -B /cvmfs,/opt/boinc/instance_homes/boinc_31417/slots/3 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-06-06 11:38:35]  *** The last 200 lines of the pilot log: ***
[2025-06-06 11:38:35] 2025-06-06 11:38:15,799 | INFO     | mean x: 1749205645.5
[2025-06-06 11:38:35] 2025-06-06 11:38:15,799 | INFO     | mean y: 2693233.862318841
[2025-06-06 11:38:35] 2025-06-06 11:38:15,799 | INFO     | -- intersect: 22957581020.9995
[2025-06-06 11:38:35] 2025-06-06 11:38:15,799 | INFO     | intersect: 22957581020.9995
[2025-06-06 11:38:35] 2025-06-06 11:38:15,800 | INFO     | chi2: 2.0414572630225702
[2025-06-06 11:38:35] 2025-06-06 11:38:15,800 | INFO     | sum of square deviations: 729472282.0
[2025-06-06 11:38:35] 2025-06-06 11:38:15,800 | INFO     | sum of deviations: -322443010.9999899
[2025-06-06 11:38:35] 2025-06-06 11:38:15,800 | INFO     | mean x: 1749205493.0
[2025-06-06 11:38:35] 2025-06-06 11:38:15,800 | INFO     | mean y: 2711257.067669173
[2025-06-06 11:38:35] 2025-06-06 11:38:15,800 | INFO     | -- intersect: 775899080.5642196
[2025-06-06 11:38:35] 2025-06-06 11:38:15,800 | INFO     | intersect: 775899080.5642196
[2025-06-06 11:38:35] 2025-06-06 11:38:15,801 | INFO     | chi2: 1.3017640764540799
[2025-06-06 11:38:35] 2025-06-06 11:38:15,801 | INFO     | current chi2=1.3017640764540799 (change=36.23358666217214 %)
[2025-06-06 11:38:35] 2025-06-06 11:38:15,801 | INFO     | sum of square deviations: 650252192.0
[2025-06-06 11:38:35] 2025-06-06 11:38:15,801 | INFO     | sum of deviations: 410826155.0
[2025-06-06 11:38:35] 2025-06-06 11:38:15,801 | INFO     | mean x: 1749205340.5
[2025-06-06 11:38:35] 2025-06-06 11:38:15,801 | INFO     | sufficient remaining disk space (278012100608 B)
[2025-06-06 11:38:35] 2025-06-06 11:38:15,801 | INFO     | mean y: 2712669.359375
[2025-06-06 11:38:35] 2025-06-06 11:38:15,801 | INFO     | -- intersect: -1102426710.6906977
[2025-06-06 11:38:35] 2025-06-06 11:38:15,801 | INFO     | intersect: -1102426710.6906977
[2025-06-06 11:38:35] 2025-06-06 11:38:15,801 | INFO     | work directory size check will use 2537553920 B as a max limit (10% grace limit added)
[2025-06-06 11:38:35] 2025-06-06 11:38:15,802 | INFO     | chi2: 1.3032285747460455
[2025-06-06 11:38:35] 2025-06-06 11:38:15,802 | INFO     | current chi2=1.3032285747460455 (change=-0.11250105287547929 %)
[2025-06-06 11:38:35] 2025-06-06 11:38:15,802 | INFO     | right removable region: 127
[2025-06-06 11:38:35] 2025-06-06 11:38:15,802 | INFO     | sum of square deviations: 729472282.0
[2025-06-06 11:38:35] 2025-06-06 11:38:15,802 | INFO     | sum of deviations: -30731220805.0
[2025-06-06 11:38:35] 2025-06-06 11:38:15,802 | INFO     | mean x: 1749205798.0
[2025-06-06 11:38:35] 2025-06-06 11:38:15,802 | INFO     | mean y: 2728470.3157894737
[2025-06-06 11:38:35] 2025-06-06 11:38:15,802 | INFO     | -- intersect: 73693300323.63295
[2025-06-06 11:38:35] 2025-06-06 11:38:15,802 | INFO     | intersect: 73693300323.63295
[2025-06-06 11:38:35] 2025-06-06 11:38:15,802 | INFO     | chi2: 0.80330907910577
[2025-06-06 11:38:35] 2025-06-06 11:38:15,802 | INFO     | current chi2=0.80330907910577 (change=60.65021327380643 %)
[2025-06-06 11:38:35] 2025-06-06 11:38:15,803 | INFO     | sum of square deviations: 650252192.0
[2025-06-06 11:38:35] 2025-06-06 11:38:15,803 | INFO     | sum of deviations: -29252450021.0
[2025-06-06 11:38:35] 2025-06-06 11:38:15,803 | INFO     | mean x: 1749205950.5
[2025-06-06 11:38:35] 2025-06-06 11:38:15,803 | INFO     | mean y: 2725604.0625
[2025-06-06 11:38:35] 2025-06-06 11:38:15,803 | INFO     | -- intersect: 78693055714.37923
[2025-06-06 11:38:35] 2025-06-06 11:38:15,803 | INFO     | intersect: 78693055714.37923
[2025-06-06 11:38:35] 2025-06-06 11:38:15,803 | INFO     | chi2: 0.8011042521724011
[2025-06-06 11:38:35] 2025-06-06 11:38:15,803 | INFO     | current chi2=0.8011042521724011 (change=0.2744680709725391 %)
[2025-06-06 11:38:35] 2025-06-06 11:38:15,803 | INFO     | left removable region: 20
[2025-06-06 11:38:35] 2025-06-06 11:38:15,803 | INFO     | sum of square deviations: 379832238.0
[2025-06-06 11:38:35] 2025-06-06 11:38:15,804 | INFO     | sum of deviations: -14265069234.0
[2025-06-06 11:38:35] 2025-06-06 11:38:15,804 | INFO     | mean x: 1749205920.0
[2025-06-06 11:38:35] 2025-06-06 11:38:15,804 | INFO     | mean y: 2741898.429906542
[2025-06-06 11:38:35] 2025-06-06 11:38:15,804 | INFO     | -- intersect: 65696332533.89004
[2025-06-06 11:38:35] 2025-06-06 11:38:15,804 | INFO     | intersect: 65696332533.89004
[2025-06-06 11:38:35] 2025-06-06 11:38:15,804 | INFO     | chi2: 0.03108188452737203
[2025-06-06 11:38:35] 2025-06-06 11:38:15,804 | INFO     | -- intersect: 65696332533.89004
[2025-06-06 11:38:35] 2025-06-06 11:38:15,804 | INFO     | current memory leak: -37.56 B/s (using 107 data points, chi2=0.03)
[2025-06-06 11:38:35] 2025-06-06 11:38:15,804 | INFO     | ..............................
[2025-06-06 11:38:35] 2025-06-06 11:38:15,804 | INFO     | . Timing measurements:
[2025-06-06 11:38:35] 2025-06-06 11:38:15,804 | INFO     | . get job = 0 s
[2025-06-06 11:38:35] 2025-06-06 11:38:15,804 | INFO     | . initial setup = 1 s
[2025-06-06 11:38:35] 2025-06-06 11:38:15,804 | INFO     | . payload setup = 2 s
[2025-06-06 11:38:35] 2025-06-06 11:38:15,805 | INFO     | . stage-in = 0 s
[2025-06-06 11:38:35] 2025-06-06 11:38:15,805 | INFO     | . payload execution = 8374 s
[2025-06-06 11:38:35] 2025-06-06 11:38:15,805 | INFO     | . stage-out = 1 s
[2025-06-06 11:38:35] 2025-06-06 11:38:15,805 | INFO     | . log creation = 0 s
[2025-06-06 11:38:35] 2025-06-06 11:38:15,805 | INFO     | ..............................
[2025-06-06 11:38:35] 2025-06-06 11:38:15,840 | INFO     | 
[2025-06-06 11:38:35] 2025-06-06 11:38:15,840 | INFO     | job summary report
[2025-06-06 11:38:35] 2025-06-06 11:38:15,840 | INFO     | --------------------------------------------------
[2025-06-06 11:38:35] 2025-06-06 11:38:15,840 | INFO     | PanDA job id: 6679702574
[2025-06-06 11:38:35] 2025-06-06 11:38:15,840 | INFO     | task id: 45006595
[2025-06-06 11:38:35] 2025-06-06 11:38:15,840 | INFO     | errors: (none)
[2025-06-06 11:38:35] 2025-06-06 11:38:15,840 | INFO     | status: LOG_TRANSFER = DONE 
[2025-06-06 11:38:35] 2025-06-06 11:38:15,840 | INFO     | pilot state: finished 
[2025-06-06 11:38:35] 2025-06-06 11:38:15,840 | INFO     | transexitcode: 0
[2025-06-06 11:38:35] 2025-06-06 11:38:15,840 | INFO     | exeerrorcode: 0
[2025-06-06 11:38:35] 2025-06-06 11:38:15,840 | INFO     | exeerrordiag: 
[2025-06-06 11:38:35] 2025-06-06 11:38:15,840 | INFO     | exitcode: 0
[2025-06-06 11:38:35] 2025-06-06 11:38:15,841 | INFO     | exitmsg: OK
[2025-06-06 11:38:35] 2025-06-06 11:38:15,841 | INFO     | cpuconsumptiontime: 27842 s
[2025-06-06 11:38:35] 2025-06-06 11:38:15,841 | INFO     | nevents: 400
[2025-06-06 11:38:35] 2025-06-06 11:38:15,841 | INFO     | neventsw: 0
[2025-06-06 11:38:35] 2025-06-06 11:38:15,841 | INFO     | pid: 910620
[2025-06-06 11:38:35] 2025-06-06 11:38:15,841 | INFO     | pgrp: 910620
[2025-06-06 11:38:35] 2025-06-06 11:38:15,841 | INFO     | corecount: 12
[2025-06-06 11:38:35] 2025-06-06 11:38:15,841 | INFO     | event service: False
[2025-06-06 11:38:35] 2025-06-06 11:38:15,841 | INFO     | sizes: {0: 2397143, 1: 2397342, 2: 2397548, 11: 2397576, 8380: 2425357, 8381: 2425356, 8383: 2434583, 8434: 2434697}
[2025-06-06 11:38:35] 2025-06-06 11:38:15,841 | INFO     | --------------------------------------------------
[2025-06-06 11:38:35] 2025-06-06 11:38:15,841 | INFO     | 
[2025-06-06 11:38:35] 2025-06-06 11:38:15,841 | INFO     | executing command: ls -lF /opt/boinc/instance_homes/boinc_31417/slots/3
[2025-06-06 11:38:35] 2025-06-06 11:38:15,844 | INFO     | size of work directory /opt/boinc/instance_homes/boinc_31417/slots/3/PanDA_Pilot-6679702574: 4840649 B (within 2537553920 B limit)
[2025-06-06 11:38:35] 2025-06-06 11:38:15,844 | INFO     | pfn file=/opt/boinc/instance_homes/boinc_31417/slots/3/PanDA_Pilot-6679702574/HITS.45006595._056640.pool.root.1 does not exist (skip from workdir size calculation)
[2025-06-06 11:38:35] 2025-06-06 11:38:15,844 | INFO     | total size of present files: 0 B (workdir size: 4840649 B)
[2025-06-06 11:38:35] 2025-06-06 11:38:15,844 | INFO     | output file size check: skipping output file /opt/boinc/instance_homes/boinc_31417/slots/3/PanDA_Pilot-6679702574/HITS.45006595._056640.pool.root.1 since it does n
[2025-06-06 11:38:35] 2025-06-06 11:38:15,849 | INFO     | queue jobs had 0 job(s) [purged]
[2025-06-06 11:38:35] 2025-06-06 11:38:15,849 | INFO     | queue payloads had 0 job(s) [purged]
[2025-06-06 11:38:35] 2025-06-06 11:38:15,849 | INFO     | queue data_in had 0 job(s) [purged]
[2025-06-06 11:38:35] 2025-06-06 11:38:15,849 | INFO     | queue data_out had 0 job(s) [purged]
[2025-06-06 11:38:35] 2025-06-06 11:38:15,849 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-06-06 11:38:35] 2025-06-06 11:38:15,850 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-06-06 11:38:35] 2025-06-06 11:38:15,850 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-06-06 11:38:35] 2025-06-06 11:38:15,850 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-06-06 11:38:35] 2025-06-06 11:38:15,850 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-06-06 11:38:35] 2025-06-06 11:38:15,850 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-06-06 11:38:35] 2025-06-06 11:38:15,850 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-06-06 11:38:35] 2025-06-06 11:38:15,850 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-06-06 11:38:35] 2025-06-06 11:38:15,850 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-06-06 11:38:35] 2025-06-06 11:38:15,850 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-06-06 11:38:35] 2025-06-06 11:38:15,850 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-06-06 11:38:35] 2025-06-06 11:38:15,850 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-06-06 11:38:35] 2025-06-06 11:38:15,850 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-06-06 11:38:35] 2025-06-06 11:38:15,850 | INFO     | queue completed_jobids has 1 job(s)
[2025-06-06 11:38:35] 2025-06-06 11:38:15,850 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-06-06 11:38:35] 2025-06-06 11:38:15,850 | INFO     | queue messages had 0 job(s) [purged]
[2025-06-06 11:38:35] 2025-06-06 11:38:15,850 | INFO     | job 6679702574 has completed (purged errors)
[2025-06-06 11:38:35] 2025-06-06 11:38:15,851 | INFO     | overall cleanup function is called
[2025-06-06 11:38:35] 2025-06-06 11:38:15,884 | INFO     | number of running child processes to parent process 910620: 1
[2025-06-06 11:38:35] 2025-06-06 11:38:15,885 | INFO     | maximum number of monitored processes: 6
[2025-06-06 11:38:35] 2025-06-06 11:38:15,885 | INFO     | aborting job monitoring since job object (job id=6679702574) has expired
[2025-06-06 11:38:35] 2025-06-06 11:38:16,872 | INFO     | --- collectZombieJob: --- 10, [910620]
[2025-06-06 11:38:35] 2025-06-06 11:38:16,872 | INFO     | zombie collector waiting for pid 910620
[2025-06-06 11:38:35] 2025-06-06 11:38:16,872 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-06-06 11:38:35] 2025-06-06 11:38:16,872 | INFO     | collected zombie processes
[2025-06-06 11:38:35] 2025-06-06 11:38:16,872 | INFO     | will attempt to kill all subprocesses of pid=910620
[2025-06-06 11:38:35] 2025-06-06 11:38:16,904 | INFO     | process IDs to be killed: [910620] (in reverse order)
[2025-06-06 11:38:35] 2025-06-06 11:38:16,920 | WARNING  | found no corresponding commands to process id(s)
[2025-06-06 11:38:35] 2025-06-06 11:38:16,920 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-06-06 11:38:35] 2025-06-06 11:38:16,921 | INFO     | did not find any defunct processes belonging to 910620
[2025-06-06 11:38:35] 2025-06-06 11:38:16,922 | INFO     | did not find any defunct processes belonging to 910620
[2025-06-06 11:38:35] 2025-06-06 11:38:16,922 | INFO     | ready for new job
[2025-06-06 11:38:35] 2025-06-06 11:38:16,922 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-06-06 11:38:35] 2025-06-06 11:38:16,923 | INFO     | **************************************
[2025-06-06 11:38:35] 2025-06-06 11:38:16,923 | INFO     | ***  PanDA Pilot version 3.10.2.2  ***
[2025-06-06 11:38:35] 2025-06-06 11:38:16,923 | INFO     | **************************************
[2025-06-06 11:38:35] 2025-06-06 11:38:16,923 | INFO     | 
[2025-06-06 11:38:35] 2025-06-06 11:38:16,940 | INFO     | architecture information:
[2025-06-06 11:38:35] 2025-06-06 11:38:16,941 | INFO     | executing command: cat /etc/os-release
[2025-06-06 11:38:35] 2025-06-06 11:38:16,947 | INFO     | cat /etc/os-release:
[2025-06-06 11:38:35] NAME="CentOS Linux"
[2025-06-06 11:38:35] VERSION="7 (Core)"
[2025-06-06 11:38:35] ID="centos"
[2025-06-06 11:38:35] ID_LIKE="rhel fedora"
[2025-06-06 11:38:35] VERSION_ID="7"
[2025-06-06 11:38:35] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-06-06 11:38:35] ANSI_COLOR="0;31"
[2025-06-06 11:38:35] CPE_NAME="cpe:/o:centos:centos:7"
[2025-06-06 11:38:35] HOME_URL="https://www.centos.org/"
[2025-06-06 11:38:35] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-06-06 11:38:35] 
[2025-06-06 11:38:35] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-06-06 11:38:35] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-06-06 11:38:35] REDHAT_SUPPORT_PRODUCT="centos"
[2025-06-06 11:38:35] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-06-06 11:38:35] 
[2025-06-06 11:38:35] 2025-06-06 11:38:16,947 | INFO     | **************************************
[2025-06-06 11:38:35] 2025-06-06 11:38:17,449 | INFO     | executing command: df -mP /opt/boinc/instance_homes/boinc_31417/slots/3
[2025-06-06 11:38:35] 2025-06-06 11:38:17,455 | INFO     | sufficient remaining disk space (278018392064 B)
[2025-06-06 11:38:35] 2025-06-06 11:38:17,456 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-06-06 11:38:35] 2025-06-06 11:38:17,456 | INFO     | current server update state: UPDATING_FINAL
[2025-06-06 11:38:35] 2025-06-06 11:38:17,456 | INFO     | update_server=False
[2025-06-06 11:38:35] 2025-06-06 11:38:17,456 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-06-06 11:38:35] 2025-06-06 11:38:17,456 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-06-06 11:38:35] 2025-06-06 11:38:17,456 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-06-06 11:38:35] 2025-06-06 11:38:17,456 | INFO     | aborting loop
[2025-06-06 11:38:35] 2025-06-06 11:38:17,905 | INFO     | all payload control threads have been joined
[2025-06-06 11:38:35] 2025-06-06 11:38:17,972 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-06-06 11:38:35] 2025-06-06 11:38:18,233 | INFO     | found 0 job(s) in 20 queues
[2025-06-06 11:38:35] 2025-06-06 11:38:18,233 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-06-06 11:38:35] 2025-06-06 11:38:18,233 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-06-06 11:38:35] 2025-06-06 11:38:18,460 | INFO     | [job] queue monitor thread has finished
[2025-06-06 11:38:35] 2025-06-06 11:38:18,460 | INFO     | [job] retrieve thread has finished
[2025-06-06 11:38:35] 2025-06-06 11:38:18,461 | INFO     | [job] job monitor thread has finished
[2025-06-06 11:38:35] 2025-06-06 11:38:18,464 | INFO     | all data control threads have been joined
[2025-06-06 11:38:35] 2025-06-06 11:38:18,628 | INFO     | [payload] validate_pre thread has finished
[2025-06-06 11:38:35] 2025-06-06 11:38:18,644 | INFO     | [job] create_data_payload thread has finished
[2025-06-06 11:38:35] 2025-06-06 11:38:18,664 | INFO     | [data] copytool_in thread has finished
[2025-06-06 11:38:35] 2025-06-06 11:38:18,676 | INFO     | all job control threads have been joined
[2025-06-06 11:38:35] 2025-06-06 11:38:18,908 | INFO     | [payload] control thread has finished
[2025-06-06 11:38:35] 2025-06-06 11:38:19,124 | INFO     | [payload] execute_payloads thread has finished
[2025-06-06 11:38:35] 2025-06-06 11:38:19,468 | INFO     | [data] control thread has finished
[2025-06-06 11:38:35] 2025-06-06 11:38:19,532 | INFO     | [job] validate thread has finished
[2025-06-06 11:38:35] 2025-06-06 11:38:19,680 | INFO     | [job] control thread has finished
[2025-06-06 11:38:35] 2025-06-06 11:38:19,780 | INFO     | [payload] failed_post thread has finished
[2025-06-06 11:38:35] 2025-06-06 11:38:19,864 | INFO     | [payload] validate_post thread has finished
[2025-06-06 11:38:35] 2025-06-06 11:38:19,977 | INFO     | [data] copytool_out thread has finished
[2025-06-06 11:38:35] 2025-06-06 11:38:20,615 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-06-06 11:38:35] 2025-06-06 11:38:24,620 | INFO     | [data] queue_monitor thread has finished
[2025-06-06 11:38:35] 2025-06-06 11:38:27,676 | INFO     | job.realtimelogging is not enabled
[2025-06-06 11:38:35] 2025-06-06 11:38:28,681 | INFO     | [payload] run_realtimelog thread has finished
[2025-06-06 11:38:35] 2025-06-06 11:38:29,801 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 139916358063936)>', '<ExcThread(monitor, started 139915908069120)>']
[2025-06-06 11:38:35] 2025-06-06 11:38:30,283 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-06-06 11:38:35] 2025-06-06 11:38:30,283 | INFO     | [monitor] control thread has ended
[2025-06-06 11:38:35] 2025-06-06 11:38:34,826 | INFO     | all workflow threads have been joined
[2025-06-06 11:38:35] 2025-06-06 11:38:34,826 | INFO     | end of generic workflow (traces error code: 0)
[2025-06-06 11:38:35] 2025-06-06 11:38:34,826 | INFO     | traces error code: 0
[2025-06-06 11:38:35] 2025-06-06 11:38:34,826 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-06-06 11:38:35] 2025-06-06 11:38:35,130 [wrapper] ==== pilot stdout END ====
[2025-06-06 11:38:35] 2025-06-06 11:38:35,131 [wrapper] ==== wrapper stdout RESUME ====
[2025-06-06 11:38:35] 2025-06-06 11:38:35,132 [wrapper] pilotpid: 904142
[2025-06-06 11:38:35] 2025-06-06 11:38:35,133 [wrapper] Pilot exit status: 0
[2025-06-06 11:38:35] 2025-06-06 11:38:35,154 [wrapper] pandaids: 6679702574
[2025-06-06 11:38:35] 2025-06-06 11:38:35,161 [wrapper] cleanup supervisor_pilot  935709 904143
[2025-06-06 11:38:35] 2025-06-06 11:38:35,162 [wrapper] Test setup, not cleaning
[2025-06-06 11:38:35] 2025-06-06 11:38:35,163 [wrapper] apfmon messages muted
[2025-06-06 11:38:35] 2025-06-06 11:38:35,164 [wrapper] ==== wrapper stdout END ====
[2025-06-06 11:38:35] 2025-06-06 11:38:35,165 [wrapper] ==== wrapper stderr END ====
[2025-06-06 11:38:35]  *** Error codes and diagnostics ***
[2025-06-06 11:38:35]     "exeErrorCode": 0,
[2025-06-06 11:38:35]     "exeErrorDiag": "",
[2025-06-06 11:38:35]     "pilotErrorCode": 0,
[2025-06-06 11:38:35]     "pilotErrorDiag": "",
[2025-06-06 11:38:35]  *** Listing of results directory ***
[2025-06-06 11:38:35] total 391300
[2025-06-06 11:38:35] -rw-r--r-- 1 boinc boinc    495897 Jun  4 12:39 pilot3.tar.gz
[2025-06-06 11:38:35] -rw-r--r-- 1 boinc boinc      5111 Jun  4 12:50 queuedata.json
[2025-06-06 11:38:35] -rwx------ 1 boinc boinc     37140 Jun  4 12:54 runpilot2-wrapper.sh
[2025-06-06 11:38:35] -rw-rw-r-- 1 boinc boinc       100 Jun  6 09:17 wrapper_26015_x86_64-pc-linux-gnu
[2025-06-06 11:38:35] -rwxr-xr-x 1 boinc boinc      7986 Jun  6 09:17 run_atlas
[2025-06-06 11:38:35] -rw-rw-r-- 1 boinc boinc       105 Jun  6 09:17 job.xml
[2025-06-06 11:38:35] -rw-rw-r-- 1 boinc boinc      9334 Jun  6 09:17 init_data.xml
[2025-06-06 11:38:35] -rw-r--r-- 2 boinc boinc 216652181 Jun  6 09:17 EVNT.45006593._002045.pool.root.1
[2025-06-06 11:38:35] drwxrwx--x 2 boinc boinc      4096 Jun  6 09:17 shared
[2025-06-06 11:38:35] -rw-r--r-- 2 boinc boinc    508886 Jun  6 09:17 input.tar.gz
[2025-06-06 11:38:35] -rw-r--r-- 2 boinc boinc     15093 Jun  6 09:17 start_atlas.sh
[2025-06-06 11:38:35] -rw-rw-r-- 1 boinc boinc         0 Jun  6 09:17 boinc_lockfile
[2025-06-06 11:38:35] -rw-rw-r-- 1 boinc boinc      2524 Jun  6 09:17 pandaJob.out
[2025-06-06 11:38:35] -rw------- 1 boinc boinc    987967 Jun  6 09:17 agis_schedconf.cvmfs.json
[2025-06-06 11:38:35] -rw------- 1 boinc boinc   1598969 Jun  6 09:17 agis_ddmendpoints.agis.ALL.json
[2025-06-06 11:38:35] drwx------ 4 boinc boinc      4096 Jun  6 09:17 pilot3
[2025-06-06 11:38:35] -rw------- 1 boinc boinc 177739194 Jun  6 11:36 HITS.45006595._056640.pool.root.1
[2025-06-06 11:38:35] -rw-rw-r-- 1 boinc boinc       529 Jun  6 11:36 boinc_task_state.xml
[2025-06-06 11:38:35] -rw------- 1 boinc boinc      1028 Jun  6 11:37 memory_monitor_summary.json
[2025-06-06 11:38:35] -rw------- 1 boinc boinc    408094 Jun  6 11:37 log.45006595._056640.job.log.tgz.1
[2025-06-06 11:38:35] -rw------- 1 boinc boinc        95 Jun  6 11:37 pilot_heartbeat.json
[2025-06-06 11:38:35] -rw------- 1 boinc boinc      7692 Jun  6 11:38 heartbeat.json
[2025-06-06 11:38:35] -rw-rw-r-- 1 boinc boinc      8192 Jun  6 11:38 boinc_mmap_file
[2025-06-06 11:38:35] -rw-rw-r-- 1 boinc boinc        27 Jun  6 11:38 wrapper_checkpoint.txt
[2025-06-06 11:38:35] -rw------- 1 boinc boinc      4449 Jun  6 11:38 pilotlog.txt
[2025-06-06 11:38:35] -rw------- 1 boinc boinc    821820 Jun  6 11:38 log.45006595._056640.job.log.1
[2025-06-06 11:38:35] -rw------- 1 boinc boinc       357 Jun  6 11:38 output.list
[2025-06-06 11:38:35] -rw-rw-r-- 1 boinc boinc       620 Jun  6 11:38 runtime_log
[2025-06-06 11:38:35] -rw------- 1 boinc boinc   1249280 Jun  6 11:38 result.tar.gz
[2025-06-06 11:38:35] -rw------- 1 boinc boinc       658 Jun  6 11:38 zukMDmUo2g7n9Rq4apOajLDm4fhM0noT9bVof3QYDm52aKDm97VAbn.diag
[2025-06-06 11:38:35] -rw-rw-r-- 1 boinc boinc      8978 Jun  6 11:38 runtime_log.err
[2025-06-06 11:38:35] -rw-rw-r-- 1 boinc boinc     21326 Jun  6 11:38 stderr.txt
[2025-06-06 11:38:35] HITS file was successfully produced:
[2025-06-06 11:38:35] -rw------- 1 boinc boinc 177739194 Jun  6 11:36 shared/HITS.pool.root.1
[2025-06-06 11:38:35]  *** Contents of shared directory: ***
[2025-06-06 11:38:35] total 386896
[2025-06-06 11:38:35] -rw-r--r-- 2 boinc boinc 216652181 Jun  6 09:17 ATLAS.root_0
[2025-06-06 11:38:35] -rw-r--r-- 2 boinc boinc    508886 Jun  6 09:17 input.tar.gz
[2025-06-06 11:38:35] -rw-r--r-- 2 boinc boinc     15093 Jun  6 09:17 start_atlas.sh
[2025-06-06 11:38:35] -rw------- 1 boinc boinc 177739194 Jun  6 11:36 HITS.pool.root.1
[2025-06-06 11:38:35] -rw------- 1 boinc boinc   1249280 Jun  6 11:38 result.tar.gz
11:38:37 (900521): run_atlas exited; CPU time 27875.783189
11:38:37 (900521): called boinc_finish(0)

</stderr_txt>
]]>

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