Stderr output

<core_client_version>8.1.0</core_client_version>
<![CDATA[
<stderr_txt>
10:17:03 (3476264): wrapper (7.7.26015): starting
10:17:03 (3476264): wrapper: running run_atlas (--nthreads 8)
[2025-06-04 10:17:03] Arguments: --nthreads 8
[2025-06-04 10:17:03] Threads: 8
[2025-06-04 10:17:03] Checking for CVMFS
[2025-06-04 10:17:03] Probing /cvmfs/atlas.cern.ch... OK
[2025-06-04 10:17:03] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-06-04 10:17:03] Running cvmfs_config stat atlas.cern.ch
[2025-06-04 10:17:04] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-06-04 10:17:04] 2.12.6.0 676006 23837 195512 146781 1 859 21322596 32503808 34501 16776704 0 311138183 99.696 225791566 36740 http://cvmfs-s1fnal.opensciencegrid.org:8000/cvmfs/atlas.cern.ch http://192.41.231.237:6081 1
[2025-06-04 10:17:04] CVMFS is ok
[2025-06-04 10:17:04] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-06-04 10:17:04] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2025-06-04 10:17:04] Further information can be found at the LHC@home message board.
[2025-06-04 10:17:04] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-06-04 10:17:04] Checking for apptainer binary...
[2025-06-04 10:17:04] Using apptainer found in PATH at /usr/bin/apptainer
[2025-06-04 10:17:04] Running /usr/bin/apptainer --version
[2025-06-04 10:17:04] apptainer version 1.4.1-1.el9
[2025-06-04 10:17:04] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-06-04 10:17:04] c8-7-2.aglt2.org
[2025-06-04 10:17:04] apptainer works
[2025-06-04 10:17:04] Set ATHENA_PROC_NUMBER=8
[2025-06-04 10:17:04] Set ATHENA_CORE_NUMBER=8
[2025-06-04 10:17:04] Starting ATLAS job with PandaID=6679750660
[2025-06-04 10:17:04] Running command: /usr/bin/apptainer exec -B /cvmfs,/tmp/boinchome/slots/0 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-06-04 11:10:10]  *** The last 200 lines of the pilot log: ***
[2025-06-04 11:10:10]  filetype=log
[2025-06-04 11:10:10]  guid=87365812-ca69-40e2-b1c0-4b067365751e
[2025-06-04 11:10:10]  inputddms=['NDGF-T1_DATADISK', 'CERN-PROD_DATADISK']
[2025-06-04 11:10:10]  is_altstaged=None
[2025-06-04 11:10:10]  is_tar=False
[2025-06-04 11:10:10]  lfn=log.45006595._056684.job.log.tgz.1
[2025-06-04 11:10:10]  mtime=0
[2025-06-04 11:10:10]  protocol_id=None
[2025-06-04 11:10:10]  protocols=[{'endpoint': 'davs://dav.ndgf.org:443', 'flavour': 'WEBDAV', 'id': 331, 'path': '/atlas/disk/atlasdatadisk/rucio/'}]
[2025-06-04 11:10:10]  replicas=None
[2025-06-04 11:10:10]  scope=mc23_13p6TeV
[2025-06-04 11:10:10]  status=None
[2025-06-04 11:10:10]  status_code=0
[2025-06-04 11:10:10]  storage_token=
[2025-06-04 11:10:10]  surl=/tmp/boinchome/slots/0/PanDA_Pilot-6679750660/log.45006595._056684.job.log.tgz.1
[2025-06-04 11:10:10]  turl=davs://dav.ndgf.org:443/atlas/disk/atlasdatadisk/rucio/mc23_13p6TeV/04/be/log.45006595._056684.job.log.tgz.1
[2025-06-04 11:10:10]  workdir=None
[2025-06-04 11:10:10] ]
[2025-06-04 11:10:10] 2025-06-04 15:09:50,867 | INFO     | transferring file log.45006595._056684.job.log.tgz.1 from /tmp/boinchome/slots/0/PanDA_Pilot-6679750660/log.45006595._056684.job.log.tgz.1 to /tmp/boinchome/slots/
[2025-06-04 11:10:10] 2025-06-04 15:09:50,867 | INFO     | executing command: /usr/bin/env mv /tmp/boinchome/slots/0/PanDA_Pilot-6679750660/log.45006595._056684.job.log.tgz.1 /tmp/boinchome/slots/0/log.45006595._056684.job
[2025-06-04 11:10:10] 2025-06-04 15:09:50,883 | INFO     | adding to output.list: log.45006595._056684.job.log.tgz.1 davs://dav.ndgf.org:443/atlas/disk/atlasdatadisk/rucio/mc23_13p6TeV/04/be/log.45006595._056684.job.log.tg
[2025-06-04 11:10:10] 2025-06-04 15:09:50,884 | INFO     | alt stage-out settings: ['pl', 'write_lan', 'w', 'default'], allow_altstageout=False, remain_files=0, has_altstorage=True
[2025-06-04 11:10:10] 2025-06-04 15:09:50,884 | INFO     | summary of transferred files:
[2025-06-04 11:10:10] 2025-06-04 15:09:50,884 | INFO     |  -- lfn=log.45006595._056684.job.log.tgz.1, status_code=0, status=transferred
[2025-06-04 11:10:10] 2025-06-04 15:09:50,884 | INFO     | stage-out finished correctly
[2025-06-04 11:10:10] 2025-06-04 15:09:51,758 | INFO     | PID=3480345 has CPU usage=11.9% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i 
[2025-06-04 11:10:10] 2025-06-04 15:09:51,758 | INFO     | .. there are 51 such processes running
[2025-06-04 11:10:10] 2025-06-04 15:09:54,246 | INFO     | finished stage-out for finished payload, adding job to finished_jobs queue
[2025-06-04 11:10:10] 2025-06-04 15:09:54,302 | INFO     | job 6679750660 has state=finished
[2025-06-04 11:10:10] 2025-06-04 15:09:54,302 | INFO     | preparing for final server update for job 6679750660 in state='finished'
[2025-06-04 11:10:10] 2025-06-04 15:09:54,302 | INFO     | this job has now completed (state=finished)
[2025-06-04 11:10:10] 2025-06-04 15:09:54,302 | INFO     | pilot will not update the server (heartbeat message will be written to file)
[2025-06-04 11:10:10] 2025-06-04 15:09:54,303 | INFO     | log transfer has been attempted: DONE
[2025-06-04 11:10:10] 2025-06-04 15:09:54,303 | INFO     | job 6679750660 has finished - writing final server update
[2025-06-04 11:10:10] 2025-06-04 15:09:54,303 | INFO     | total number of processed events: 400 (read)
[2025-06-04 11:10:10] 2025-06-04 15:09:54,321 | INFO     | executing command: lscpu
[2025-06-04 11:10:10] 2025-06-04 15:09:54,397 | INFO     | executing command: export ATLAS_LOCAL_ROOT_BASE=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase;source ${ATLAS_LOCAL_ROOT_BASE}/user/atlasLocalSetup.sh --quiet;lsetup
[2025-06-04 11:10:10] 2025-06-04 15:09:56,711 | WARNING  | process 3490057 can no longer be monitored (due to stat problems) - aborting
[2025-06-04 11:10:10] 2025-06-04 15:09:56,712 | INFO     | using path: /tmp/boinchome/slots/0/PanDA_Pilot-6679750660/memory_monitor_summary.json (trf name=prmon)
[2025-06-04 11:10:10] 2025-06-04 15:09:57,140 | INFO     | number of running child processes to parent process 3490057: 1
[2025-06-04 11:10:10] 2025-06-04 15:09:57,141 | INFO     | maximum number of monitored processes: 6
[2025-06-04 11:10:10] 2025-06-04 15:09:58,915 | INFO     | CPU arch script returned: x86-64-v4
[2025-06-04 11:10:10] 2025-06-04 15:09:58,917 | INFO     | using path: /tmp/boinchome/slots/0/PanDA_Pilot-6679750660/memory_monitor_summary.json (trf name=prmon)
[2025-06-04 11:10:10] 2025-06-04 15:09:58,917 | INFO     | extracted standard info from prmon json
[2025-06-04 11:10:10] 2025-06-04 15:09:58,917 | INFO     | extracted standard memory fields from prmon json
[2025-06-04 11:10:10] 2025-06-04 15:09:58,917 | WARNING  | GPU info not found in prmon json: 'gpu'
[2025-06-04 11:10:10] 2025-06-04 15:09:58,918 | WARNING  | format EVNTtoHITS has no such key: dbData
[2025-06-04 11:10:10] 2025-06-04 15:09:58,918 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2025-06-04 11:10:10] 2025-06-04 15:09:58,919 | INFO     | fitting pss+swap vs Time
[2025-06-04 11:10:10] 2025-06-04 15:09:58,919 | INFO     | sum of square deviations: 28242390.0
[2025-06-04 11:10:10] 2025-06-04 15:09:58,919 | INFO     | sum of deviations: 4495585442.0
[2025-06-04 11:10:10] 2025-06-04 15:09:58,919 | INFO     | mean x: 1749048306.0
[2025-06-04 11:10:10] 2025-06-04 15:09:58,919 | INFO     | mean y: 2391357.5555555555
[2025-06-04 11:10:10] 2025-06-04 15:09:58,919 | INFO     | -- intersect: -278408752380.9298
[2025-06-04 11:10:10] 2025-06-04 15:09:58,919 | INFO     | intersect: -278408752380.9298
[2025-06-04 11:10:10] 2025-06-04 15:09:58,919 | INFO     | chi2: 0.7694851113747774
[2025-06-04 11:10:10] 2025-06-04 15:09:58,919 | INFO     | -- intersect: -278408752380.9298
[2025-06-04 11:10:10] 2025-06-04 15:09:58,919 | INFO     | current memory leak: 159.18 B/s (using 45 data points, chi2=0.77)
[2025-06-04 11:10:10] 2025-06-04 15:09:58,920 | INFO     | ..............................
[2025-06-04 11:10:10] 2025-06-04 15:09:58,920 | INFO     | . Timing measurements:
[2025-06-04 11:10:10] 2025-06-04 15:09:58,920 | INFO     | . get job = 0 s
[2025-06-04 11:10:10] 2025-06-04 15:09:58,920 | INFO     | . initial setup = 2 s
[2025-06-04 11:10:10] 2025-06-04 15:09:58,920 | INFO     | . payload setup = 5 s
[2025-06-04 11:10:10] 2025-06-04 15:09:58,920 | INFO     | . stage-in = 0 s
[2025-06-04 11:10:10] 2025-06-04 15:09:58,920 | INFO     | . payload execution = 3132 s
[2025-06-04 11:10:10] 2025-06-04 15:09:58,920 | INFO     | . stage-out = 0 s
[2025-06-04 11:10:10] 2025-06-04 15:09:58,920 | INFO     | . log creation = 0 s
[2025-06-04 11:10:10] 2025-06-04 15:09:58,920 | INFO     | ..............................
[2025-06-04 11:10:10] 2025-06-04 15:09:58,980 | INFO     | 
[2025-06-04 11:10:10] 2025-06-04 15:09:58,980 | INFO     | job summary report
[2025-06-04 11:10:10] 2025-06-04 15:09:58,980 | INFO     | --------------------------------------------------
[2025-06-04 11:10:10] 2025-06-04 15:09:58,980 | INFO     | PanDA job id: 6679750660
[2025-06-04 11:10:10] 2025-06-04 15:09:58,980 | INFO     | task id: 45006595
[2025-06-04 11:10:10] 2025-06-04 15:09:58,980 | INFO     | errors: (none)
[2025-06-04 11:10:10] 2025-06-04 15:09:58,980 | INFO     | status: LOG_TRANSFER = DONE 
[2025-06-04 11:10:10] 2025-06-04 15:09:58,981 | INFO     | pilot state: finished 
[2025-06-04 11:10:10] 2025-06-04 15:09:58,981 | INFO     | transexitcode: 0
[2025-06-04 11:10:10] 2025-06-04 15:09:58,981 | INFO     | exeerrorcode: 0
[2025-06-04 11:10:10] 2025-06-04 15:09:58,981 | INFO     | exeerrordiag: 
[2025-06-04 11:10:10] 2025-06-04 15:09:58,981 | INFO     | exitcode: 0
[2025-06-04 11:10:10] 2025-06-04 15:09:58,981 | INFO     | exitmsg: OK
[2025-06-04 11:10:10] 2025-06-04 15:09:58,981 | INFO     | cpuconsumptiontime: 20103 s
[2025-06-04 11:10:10] 2025-06-04 15:09:58,981 | INFO     | nevents: 400
[2025-06-04 11:10:10] 2025-06-04 15:09:58,981 | INFO     | neventsw: 0
[2025-06-04 11:10:10] 2025-06-04 15:09:58,981 | INFO     | pid: 3490057
[2025-06-04 11:10:10] 2025-06-04 15:09:58,981 | INFO     | pgrp: 3490057
[2025-06-04 11:10:10] 2025-06-04 15:09:58,981 | INFO     | corecount: 8
[2025-06-04 11:10:10] 2025-06-04 15:09:58,981 | INFO     | event service: False
[2025-06-04 11:10:10] 2025-06-04 15:09:58,981 | INFO     | sizes: {0: 2397291, 5: 2397497, 11: 2397553, 3141: 2422969, 3142: 2431910, 3145: 2431966, 3150: 2432264}
[2025-06-04 11:10:10] 2025-06-04 15:09:58,981 | INFO     | --------------------------------------------------
[2025-06-04 11:10:10] 2025-06-04 15:09:58,981 | INFO     | 
[2025-06-04 11:10:10] 2025-06-04 15:09:58,981 | INFO     | executing command: ls -lF /tmp/boinchome/slots/0
[2025-06-04 11:10:10] 2025-06-04 15:09:59,001 | INFO     | queue jobs had 0 job(s) [purged]
[2025-06-04 11:10:10] 2025-06-04 15:09:59,001 | INFO     | queue payloads had 0 job(s) [purged]
[2025-06-04 11:10:10] 2025-06-04 15:09:59,001 | INFO     | queue data_in had 0 job(s) [purged]
[2025-06-04 11:10:10] 2025-06-04 15:09:59,001 | INFO     | queue data_out had 0 job(s) [purged]
[2025-06-04 11:10:10] 2025-06-04 15:09:59,001 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-06-04 11:10:10] 2025-06-04 15:09:59,001 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-06-04 11:10:10] 2025-06-04 15:09:59,001 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-06-04 11:10:10] 2025-06-04 15:09:59,001 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-06-04 11:10:10] 2025-06-04 15:09:59,002 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-06-04 11:10:10] 2025-06-04 15:09:59,002 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-06-04 11:10:10] 2025-06-04 15:09:59,002 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-06-04 11:10:10] 2025-06-04 15:09:59,002 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-06-04 11:10:10] 2025-06-04 15:09:59,002 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-06-04 11:10:10] 2025-06-04 15:09:59,002 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-06-04 11:10:10] 2025-06-04 15:09:59,002 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-06-04 11:10:10] 2025-06-04 15:09:59,002 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-06-04 11:10:10] 2025-06-04 15:09:59,002 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-06-04 11:10:10] 2025-06-04 15:09:59,002 | INFO     | queue completed_jobids has 1 job(s)
[2025-06-04 11:10:10] 2025-06-04 15:09:59,002 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-06-04 11:10:10] 2025-06-04 15:09:59,002 | INFO     | queue messages had 0 job(s) [purged]
[2025-06-04 11:10:10] 2025-06-04 15:09:59,002 | INFO     | job 6679750660 has completed (purged errors)
[2025-06-04 11:10:10] 2025-06-04 15:09:59,002 | INFO     | overall cleanup function is called
[2025-06-04 11:10:10] 2025-06-04 15:10:00,010 | INFO     | --- collectZombieJob: --- 10, [3490057]
[2025-06-04 11:10:10] 2025-06-04 15:10:00,010 | INFO     | zombie collector waiting for pid 3490057
[2025-06-04 11:10:10] 2025-06-04 15:10:00,010 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-06-04 11:10:10] 2025-06-04 15:10:00,010 | INFO     | collected zombie processes
[2025-06-04 11:10:10] 2025-06-04 15:10:00,011 | INFO     | will attempt to kill all subprocesses of pid=3490057
[2025-06-04 11:10:10] 2025-06-04 15:10:00,517 | INFO     | process IDs to be killed: [3490057] (in reverse order)
[2025-06-04 11:10:10] 2025-06-04 15:10:00,678 | WARNING  | found no corresponding commands to process id(s)
[2025-06-04 11:10:10] 2025-06-04 15:10:00,678 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-06-04 11:10:10] 2025-06-04 15:10:00,705 | INFO     | did not find any defunct processes belonging to 3490057
[2025-06-04 11:10:10] 2025-06-04 15:10:00,734 | INFO     | did not find any defunct processes belonging to 3490057
[2025-06-04 11:10:10] 2025-06-04 15:10:00,734 | INFO     | ready for new job
[2025-06-04 11:10:10] 2025-06-04 15:10:00,734 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-06-04 11:10:10] 2025-06-04 15:10:00,736 | INFO     | **************************************
[2025-06-04 11:10:10] 2025-06-04 15:10:00,736 | INFO     | ***  PanDA Pilot version 3.10.2.2  ***
[2025-06-04 11:10:10] 2025-06-04 15:10:00,736 | INFO     | **************************************
[2025-06-04 11:10:10] 2025-06-04 15:10:00,736 | INFO     | 
[2025-06-04 11:10:10] 2025-06-04 15:10:00,754 | INFO     | architecture information:
[2025-06-04 11:10:10] 2025-06-04 15:10:00,755 | INFO     | executing command: cat /etc/os-release
[2025-06-04 11:10:10] 2025-06-04 15:10:00,771 | INFO     | cat /etc/os-release:
[2025-06-04 11:10:10] NAME="CentOS Linux"
[2025-06-04 11:10:10] VERSION="7 (Core)"
[2025-06-04 11:10:10] ID="centos"
[2025-06-04 11:10:10] ID_LIKE="rhel fedora"
[2025-06-04 11:10:10] VERSION_ID="7"
[2025-06-04 11:10:10] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-06-04 11:10:10] ANSI_COLOR="0;31"
[2025-06-04 11:10:10] CPE_NAME="cpe:/o:centos:centos:7"
[2025-06-04 11:10:10] HOME_URL="https://www.centos.org/"
[2025-06-04 11:10:10] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-06-04 11:10:10] 
[2025-06-04 11:10:10] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-06-04 11:10:10] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-06-04 11:10:10] REDHAT_SUPPORT_PRODUCT="centos"
[2025-06-04 11:10:10] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-06-04 11:10:10] 
[2025-06-04 11:10:10] 2025-06-04 15:10:00,771 | INFO     | **************************************
[2025-06-04 11:10:10] 2025-06-04 15:10:01,274 | INFO     | executing command: df -mP /tmp/boinchome/slots/0
[2025-06-04 11:10:10] 2025-06-04 15:10:01,293 | INFO     | sufficient remaining disk space (94961139712 B)
[2025-06-04 11:10:10] 2025-06-04 15:10:01,293 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-06-04 11:10:10] 2025-06-04 15:10:01,293 | INFO     | current server update state: UPDATING_FINAL
[2025-06-04 11:10:10] 2025-06-04 15:10:01,293 | INFO     | update_server=False
[2025-06-04 11:10:10] 2025-06-04 15:10:01,293 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-06-04 11:10:10] 2025-06-04 15:10:01,294 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-06-04 11:10:10] 2025-06-04 15:10:01,294 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-06-04 11:10:10] 2025-06-04 15:10:01,295 | INFO     | aborting loop
[2025-06-04 11:10:10] 2025-06-04 15:10:01,455 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-06-04 11:10:10] 2025-06-04 15:10:01,715 | INFO     | all job control threads have been joined
[2025-06-04 11:10:10] 2025-06-04 15:10:01,779 | INFO     | found 0 job(s) in 20 queues
[2025-06-04 11:10:10] 2025-06-04 15:10:01,780 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-06-04 11:10:10] 2025-06-04 15:10:01,780 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-06-04 11:10:10] 2025-06-04 15:10:01,798 | INFO     | all data control threads have been joined
[2025-06-04 11:10:10] 2025-06-04 15:10:02,298 | INFO     | [job] retrieve thread has finished
[2025-06-04 11:10:10] 2025-06-04 15:10:02,299 | INFO     | [job] job monitor thread has finished
[2025-06-04 11:10:10] 2025-06-04 15:10:02,586 | INFO     | [job] create_data_payload thread has finished
[2025-06-04 11:10:10] 2025-06-04 15:10:02,591 | INFO     | [payload] validate_post thread has finished
[2025-06-04 11:10:10] 2025-06-04 15:10:02,671 | INFO     | [job] validate thread has finished
[2025-06-04 11:10:10] 2025-06-04 15:10:02,672 | INFO     | [data] copytool_in thread has finished
[2025-06-04 11:10:10] 2025-06-04 15:10:02,702 | INFO     | all payload control threads have been joined
[2025-06-04 11:10:10] 2025-06-04 15:10:02,720 | INFO     | [job] control thread has finished
[2025-06-04 11:10:10] 2025-06-04 15:10:02,757 | INFO     | [payload] validate_pre thread has finished
[2025-06-04 11:10:10] 2025-06-04 15:10:02,803 | INFO     | [data] control thread has finished
[2025-06-04 11:10:10] 2025-06-04 15:10:03,060 | INFO     | [payload] failed_post thread has finished
[2025-06-04 11:10:10] 2025-06-04 15:10:03,336 | INFO     | [payload] execute_payloads thread has finished
[2025-06-04 11:10:10] 2025-06-04 15:10:03,461 | INFO     | [data] copytool_out thread has finished
[2025-06-04 11:10:10] 2025-06-04 15:10:03,707 | INFO     | [payload] control thread has finished
[2025-06-04 11:10:10] 2025-06-04 15:10:03,781 | INFO     | [payload] run_realtimelog thread has finished
[2025-06-04 11:10:10] 2025-06-04 15:10:03,991 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-06-04 11:10:10] 2025-06-04 15:10:04,996 | INFO     | [job] queue monitor thread has finished
[2025-06-04 11:10:10] 2025-06-04 15:10:05,300 | INFO     | [data] queue_monitor thread has finished
[2025-06-04 11:10:10] 2025-06-04 15:10:05,322 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 139741769021248)>', '<ExcThread(monitor, started 139741039154944)>']
[2025-06-04 11:10:10] 2025-06-04 15:10:05,800 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-06-04 11:10:10] 2025-06-04 15:10:05,800 | INFO     | [monitor] control thread has ended
[2025-06-04 11:10:10] 2025-06-04 15:10:10,343 | INFO     | all workflow threads have been joined
[2025-06-04 11:10:10] 2025-06-04 15:10:10,343 | INFO     | end of generic workflow (traces error code: 0)
[2025-06-04 11:10:10] 2025-06-04 15:10:10,343 | INFO     | traces error code: 0
[2025-06-04 11:10:10] 2025-06-04 15:10:10,343 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-06-04 11:10:10] 2025-06-04 15:10:10,458 [wrapper] ==== pilot stdout END ====
[2025-06-04 11:10:10] 2025-06-04 15:10:10,460 [wrapper] ==== wrapper stdout RESUME ====
[2025-06-04 11:10:10] 2025-06-04 15:10:10,461 [wrapper] pilotpid: 3480345
[2025-06-04 11:10:10] 2025-06-04 15:10:10,464 [wrapper] Pilot exit status: 0
[2025-06-04 11:10:10] 2025-06-04 15:10:10,474 [wrapper] pandaids: 6679750660
[2025-06-04 11:10:10] 2025-06-04 15:10:10,593 [wrapper] cleanup supervisor_pilot 4119018 3480346
[2025-06-04 11:10:10] 2025-06-04 15:10:10,596 [wrapper] Test setup, not cleaning
[2025-06-04 11:10:10] 2025-06-04 15:10:10,599 [wrapper] apfmon messages muted
[2025-06-04 11:10:10] 2025-06-04 15:10:10,602 [wrapper] ==== wrapper stdout END ====
[2025-06-04 11:10:10] 2025-06-04 15:10:10,605 [wrapper] ==== wrapper stderr END ====
[2025-06-04 11:10:10]  *** Error codes and diagnostics ***
[2025-06-04 11:10:10]     "exeErrorCode": 0,
[2025-06-04 11:10:10]     "exeErrorDiag": "",
[2025-06-04 11:10:10]     "pilotErrorCode": 0,
[2025-06-04 11:10:10]     "pilotErrorDiag": "",
[2025-06-04 11:10:10]  *** Listing of results directory ***
[2025-06-04 11:10:10] total 395332
[2025-06-04 11:10:10] -rw-r--r--. 1 boincer umatlas    495897 Jun  4 09:47 pilot3.tar.gz
[2025-06-04 11:10:10] -rwx------. 1 boincer umatlas     37140 Jun  4 09:49 runpilot2-wrapper.sh
[2025-06-04 11:10:10] -rw-r--r--. 1 boincer umatlas      5111 Jun  4 09:49 queuedata.json
[2025-06-04 11:10:10] -rw-r--r--. 1 boincer umatlas       100 Jun  4 10:17 wrapper_26015_x86_64-pc-linux-gnu
[2025-06-04 11:10:10] -rwxr-xr-x. 1 boincer umatlas      7986 Jun  4 10:17 run_atlas
[2025-06-04 11:10:10] -rw-r--r--. 1 boincer umatlas       105 Jun  4 10:17 job.xml
[2025-06-04 11:10:10] -rw-r--r--. 2 boincer umatlas 215146065 Jun  4 10:17 EVNT.45006593._001759.pool.root.1
[2025-06-04 11:10:10] -rw-r--r--. 2 boincer umatlas     15093 Jun  4 10:17 start_atlas.sh
[2025-06-04 11:10:10] drwxrwx--x. 2 boincer umatlas      4096 Jun  4 10:17 shared
[2025-06-04 11:10:10] -rw-r--r--. 2 boincer umatlas    508874 Jun  4 10:17 input.tar.gz
[2025-06-04 11:10:10] -rw-r--r--. 1 boincer umatlas         0 Jun  4 10:17 boinc_lockfile
[2025-06-04 11:10:10] -rw-r--r--. 1 boincer umatlas      2524 Jun  4 10:17 pandaJob.out
[2025-06-04 11:10:10] -rw-------. 1 boincer umatlas    986819 Jun  4 10:17 agis_schedconf.cvmfs.json
[2025-06-04 11:10:10] -rw-------. 1 boincer umatlas   1598969 Jun  4 10:17 agis_ddmendpoints.agis.ALL.json
[2025-06-04 11:10:10] drwx------. 4 boincer umatlas      4096 Jun  4 10:17 pilot3
[2025-06-04 11:10:10] -rw-r--r--. 1 boincer umatlas      7158 Jun  4 11:02 init_data.xml
[2025-06-04 11:10:10] -rw-------. 1 boincer umatlas        95 Jun  4 11:09 pilot_heartbeat.json
[2025-06-04 11:10:10] -rw-------. 1 boincer umatlas 184591806 Jun  4 11:09 HITS.45006595._056684.pool.root.1
[2025-06-04 11:10:10] -rw-r--r--. 1 boincer umatlas       529 Jun  4 11:09 boinc_task_state.xml
[2025-06-04 11:10:10] -rw-------. 1 boincer umatlas      1033 Jun  4 11:09 memory_monitor_summary.json
[2025-06-04 11:10:10] -rw-------. 1 boincer umatlas    302448 Jun  4 11:09 log.45006595._056684.job.log.tgz.1
[2025-06-04 11:10:10] -rw-------. 1 boincer umatlas      7690 Jun  4 11:09 heartbeat.json
[2025-06-04 11:10:10] -rw-r--r--. 1 boincer umatlas      8192 Jun  4 11:10 boinc_mmap_file
[2025-06-04 11:10:10] -rw-r--r--. 1 boincer umatlas        27 Jun  4 11:10 wrapper_checkpoint.txt
[2025-06-04 11:10:10] -rw-------. 1 boincer umatlas      4353 Jun  4 11:10 pilotlog.txt
[2025-06-04 11:10:10] -rw-------. 1 boincer umatlas    326598 Jun  4 11:10 log.45006595._056684.job.log.1
[2025-06-04 11:10:10] -rw-------. 1 boincer umatlas       357 Jun  4 11:10 output.list
[2025-06-04 11:10:10] -rw-r--r--. 1 boincer umatlas       620 Jun  4 11:10 runtime_log
[2025-06-04 11:10:10] -rw-------. 1 boincer umatlas    645120 Jun  4 11:10 result.tar.gz
[2025-06-04 11:10:10] -rw-r--r--. 1 boincer umatlas      8649 Jun  4 11:10 runtime_log.err
[2025-06-04 11:10:10] -rw-------. 1 boincer umatlas       649 Jun  4 11:10 bEFLDm9f3g7n9Rq4apOajLDm4fhM0noT9bVof3QYDmG3aKDmmOatSn.diag
[2025-06-04 11:10:10] -rw-r--r--. 1 boincer umatlas     21292 Jun  4 11:10 stderr.txt
[2025-06-04 11:10:10] HITS file was successfully produced:
[2025-06-04 11:10:10] -rw-------. 1 boincer umatlas 184591806 Jun  4 11:09 shared/HITS.pool.root.1
[2025-06-04 11:10:10]  *** Contents of shared directory: ***
[2025-06-04 11:10:10] total 391524
[2025-06-04 11:10:10] -rw-r--r--. 2 boincer umatlas 215146065 Jun  4 10:17 ATLAS.root_0
[2025-06-04 11:10:10] -rw-r--r--. 2 boincer umatlas     15093 Jun  4 10:17 start_atlas.sh
[2025-06-04 11:10:10] -rw-r--r--. 2 boincer umatlas    508874 Jun  4 10:17 input.tar.gz
[2025-06-04 11:10:10] -rw-------. 1 boincer umatlas 184591806 Jun  4 11:09 HITS.pool.root.1
[2025-06-04 11:10:10] -rw-------. 1 boincer umatlas    645120 Jun  4 11:10 result.tar.gz
11:10:12 (3476264): run_atlas exited; CPU time 20182.674932
11:10:12 (3476264): called boinc_finish(0)

</stderr_txt>
]]>

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