Stderr output

<core_client_version>7.7.0</core_client_version>
<![CDATA[
<stderr_txt>
10:17:06 (7050): wrapper (7.7.26015): starting
10:17:06 (7050): wrapper: running run_atlas (--nthreads 8)
[2025-06-04 10:17:06] Arguments: --nthreads 8
[2025-06-04 10:17:06] Threads: 8
[2025-06-04 10:17:06] Checking for CVMFS
[2025-06-04 10:17:07] Probing /cvmfs/atlas.cern.ch... OK
[2025-06-04 10:17:07] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-06-04 10:17:07] Running cvmfs_config stat atlas.cern.ch
[2025-06-04 10:17:07] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-06-04 10:17:07] 2.11.2.0 2931 35743 76556 146781 3 56 17976405 20275201 1 130560 0 11572309 99.976 6626649 8093 http://cvmfs-s1fnal.opensciencegrid.org:8000/cvmfs/atlas.cern.ch http://192.41.237.109:6081 1
[2025-06-04 10:17:07] CVMFS is ok
[2025-06-04 10:17:07] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-06-04 10:17:07] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2025-06-04 10:17:07] Further information can be found at the LHC@home message board.
[2025-06-04 10:17:07] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-06-04 10:17:07] Checking for apptainer binary...
[2025-06-04 10:17:07] Using apptainer found in PATH at /usr/bin/apptainer
[2025-06-04 10:17:07] Running /usr/bin/apptainer --version
[2025-06-04 10:17:07] apptainer version 1.3.2-1.el7
[2025-06-04 10:17:07] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-06-04 10:17:09] c-115-5.aglt2.org
[2025-06-04 10:17:09] apptainer works
[2025-06-04 10:17:09] Set ATHENA_PROC_NUMBER=8
[2025-06-04 10:17:09] Set ATHENA_CORE_NUMBER=8
[2025-06-04 10:17:09] Starting ATLAS job with PandaID=6679650226
[2025-06-04 10:17:09] Running command: /usr/bin/apptainer exec -B /cvmfs,/tmp/boinchome/slots/0 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-06-04 12:47:15]  *** The last 200 lines of the pilot log: ***
[2025-06-04 12:47:15] 2025-06-04 16:46:58,749 | INFO     | CPU arch script returned: x86-64-v2
[2025-06-04 12:47:15] 2025-06-04 16:46:58,750 | INFO     | using path: /tmp/boinchome/slots/0/PanDA_Pilot-6679650226/memory_monitor_summary.json (trf name=prmon)
[2025-06-04 12:47:15] 2025-06-04 16:46:58,751 | INFO     | extracted standard info from prmon json
[2025-06-04 12:47:15] 2025-06-04 16:46:58,751 | INFO     | extracted standard memory fields from prmon json
[2025-06-04 12:47:15] 2025-06-04 16:46:58,752 | WARNING  | GPU info not found in prmon json: 'gpu'
[2025-06-04 12:47:15] 2025-06-04 16:46:58,752 | WARNING  | format EVNTtoHITS has no such key: dbData
[2025-06-04 12:47:15] 2025-06-04 16:46:58,752 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2025-06-04 12:47:15] 2025-06-04 16:46:58,756 | INFO     | fitting pss+swap vs Time
[2025-06-04 12:47:15] 2025-06-04 16:46:58,757 | INFO     | sum of square deviations: 984941258.0
[2025-06-04 12:47:15] 2025-06-04 16:46:58,757 | INFO     | sum of deviations: 2464578852.0
[2025-06-04 12:47:15] 2025-06-04 16:46:58,758 | INFO     | mean x: 1749051131.0
[2025-06-04 12:47:15] 2025-06-04 16:46:58,758 | INFO     | mean y: 2479130.319727891
[2025-06-04 12:47:15] 2025-06-04 16:46:58,758 | INFO     | -- intersect: -4374101090.598666
[2025-06-04 12:47:15] 2025-06-04 16:46:58,758 | INFO     | intersect: -4374101090.598666
[2025-06-04 12:47:15] 2025-06-04 16:46:58,758 | INFO     | chi2: 2.2560824915415383
[2025-06-04 12:47:15] 2025-06-04 16:46:58,758 | INFO     | sum of square deviations: 887813855.5
[2025-06-04 12:47:15] 2025-06-04 16:46:58,759 | INFO     | sum of deviations: 11848739978.999994
[2025-06-04 12:47:15] 2025-06-04 16:46:58,759 | INFO     | mean x: 1749050978.5
[2025-06-04 12:47:15] 2025-06-04 16:46:58,759 | INFO     | mean y: 2493442.9014084507
[2025-06-04 12:47:15] 2025-06-04 16:46:58,759 | INFO     | -- intersect: -23340294153.70646
[2025-06-04 12:47:15] 2025-06-04 16:46:58,760 | INFO     | intersect: -23340294153.70646
[2025-06-04 12:47:15] 2025-06-04 16:46:58,760 | INFO     | chi2: 1.4888020149914662
[2025-06-04 12:47:15] 2025-06-04 16:46:58,760 | INFO     | current chi2=1.4888020149914662 (change=34.00941585366428 %)
[2025-06-04 12:47:15] 2025-06-04 16:46:58,760 | INFO     | sum of square deviations: 797291228.0
[2025-06-04 12:47:15] 2025-06-04 16:46:58,761 | INFO     | sum of deviations: 11323709136.0
[2025-06-04 12:47:15] 2025-06-04 16:46:58,761 | INFO     | mean x: 1749050826.0
[2025-06-04 12:47:15] 2025-06-04 16:46:58,761 | INFO     | mean y: 2492558.138686131
[2025-06-04 12:47:15] 2025-06-04 16:46:58,761 | INFO     | -- intersect: -24838797703.372314
[2025-06-04 12:47:15] 2025-06-04 16:46:58,761 | INFO     | intersect: -24838797703.372314
[2025-06-04 12:47:15] 2025-06-04 16:46:58,762 | INFO     | chi2: 1.4906159134713601
[2025-06-04 12:47:15] 2025-06-04 16:46:58,762 | INFO     | current chi2=1.4906159134713601 (change=-0.12183611129141844 %)
[2025-06-04 12:47:15] 2025-06-04 16:46:58,762 | INFO     | right removable region: 136
[2025-06-04 12:47:15] 2025-06-04 16:46:58,762 | INFO     | sum of square deviations: 887813855.5
[2025-06-04 12:47:15] 2025-06-04 16:46:58,763 | INFO     | sum of deviations: -18232986711.5
[2025-06-04 12:47:15] 2025-06-04 16:46:58,763 | INFO     | mean x: 1749051283.5
[2025-06-04 12:47:15] 2025-06-04 16:46:58,763 | INFO     | mean y: 2511081.823943662
[2025-06-04 12:47:15] 2025-06-04 16:46:58,763 | INFO     | -- intersect: 35922685803.390366
[2025-06-04 12:47:15] 2025-06-04 16:46:58,763 | INFO     | intersect: 35922685803.390366
[2025-06-04 12:47:15] 2025-06-04 16:46:58,763 | INFO     | chi2: 0.8927619685452961
[2025-06-04 12:47:15] 2025-06-04 16:46:58,763 | INFO     | current chi2=0.8927619685452961 (change=60.428664648016095 %)
[2025-06-04 12:47:15] 2025-06-04 16:46:58,764 | INFO     | sum of square deviations: 797291228.0
[2025-06-04 12:47:15] 2025-06-04 16:46:58,764 | INFO     | sum of deviations: -15298242216.0
[2025-06-04 12:47:15] 2025-06-04 16:46:58,764 | INFO     | mean x: 1749051436.0
[2025-06-04 12:47:15] 2025-06-04 16:46:58,765 | INFO     | mean y: 2506067.124087591
[2025-06-04 12:47:15] 2025-06-04 16:46:58,765 | INFO     | -- intersect: 33562906052.0724
[2025-06-04 12:47:15] 2025-06-04 16:46:58,765 | INFO     | intersect: 33562906052.0724
[2025-06-04 12:47:15] 2025-06-04 16:46:58,765 | INFO     | chi2: 0.8779367156851797
[2025-06-04 12:47:15] 2025-06-04 16:46:58,765 | INFO     | current chi2=0.8779367156851797 (change=1.6606053329392232 %)
[2025-06-04 12:47:15] 2025-06-04 16:46:58,765 | INFO     | left removable region: 20
[2025-06-04 12:47:15] 2025-06-04 16:46:58,765 | INFO     | sum of square deviations: 483971865.0
[2025-06-04 12:47:15] 2025-06-04 16:46:58,766 | INFO     | sum of deviations: 2281782683.5
[2025-06-04 12:47:15] 2025-06-04 16:46:58,766 | INFO     | mean x: 1749051405.5
[2025-06-04 12:47:15] 2025-06-04 16:46:58,766 | INFO     | mean y: 2504603.922413793
[2025-06-04 12:47:15] 2025-06-04 16:46:58,766 | INFO     | -- intersect: -8243749978.70965
[2025-06-04 12:47:15] 2025-06-04 16:46:58,766 | INFO     | intersect: -8243749978.70965
[2025-06-04 12:47:15] 2025-06-04 16:46:58,767 | INFO     | chi2: 0.00019750864618780584
[2025-06-04 12:47:15] 2025-06-04 16:46:58,767 | INFO     | -- intersect: -8243749978.70965
[2025-06-04 12:47:15] 2025-06-04 16:46:58,767 | INFO     | current memory leak: 4.71 B/s (using 116 data points, chi2=0.00)
[2025-06-04 12:47:15] 2025-06-04 16:46:58,767 | INFO     | ..............................
[2025-06-04 12:47:15] 2025-06-04 16:46:58,768 | INFO     | . Timing measurements:
[2025-06-04 12:47:15] 2025-06-04 16:46:58,768 | INFO     | . get job = 0 s
[2025-06-04 12:47:15] 2025-06-04 16:46:58,768 | INFO     | . initial setup = 2 s
[2025-06-04 12:47:15] 2025-06-04 16:46:58,768 | INFO     | . payload setup = 11 s
[2025-06-04 12:47:15] 2025-06-04 16:46:58,768 | INFO     | . stage-in = 0 s
[2025-06-04 12:47:15] 2025-06-04 16:46:58,768 | INFO     | . payload execution = 8931 s
[2025-06-04 12:47:15] 2025-06-04 16:46:58,768 | INFO     | . stage-out = 0 s
[2025-06-04 12:47:15] 2025-06-04 16:46:58,768 | INFO     | . log creation = 0 s
[2025-06-04 12:47:15] 2025-06-04 16:46:58,768 | INFO     | ..............................
[2025-06-04 12:47:15] 2025-06-04 16:46:58,885 | INFO     | 
[2025-06-04 12:47:15] 2025-06-04 16:46:58,885 | INFO     | job summary report
[2025-06-04 12:47:15] 2025-06-04 16:46:58,885 | INFO     | --------------------------------------------------
[2025-06-04 12:47:15] 2025-06-04 16:46:58,885 | INFO     | PanDA job id: 6679650226
[2025-06-04 12:47:15] 2025-06-04 16:46:58,885 | INFO     | task id: 44871837
[2025-06-04 12:47:15] 2025-06-04 16:46:58,886 | INFO     | errors: (none)
[2025-06-04 12:47:15] 2025-06-04 16:46:58,886 | INFO     | status: LOG_TRANSFER = DONE 
[2025-06-04 12:47:15] 2025-06-04 16:46:58,886 | INFO     | pilot state: finished 
[2025-06-04 12:47:15] 2025-06-04 16:46:58,886 | INFO     | transexitcode: 0
[2025-06-04 12:47:15] 2025-06-04 16:46:58,886 | INFO     | exeerrorcode: 0
[2025-06-04 12:47:15] 2025-06-04 16:46:58,887 | INFO     | exeerrordiag: 
[2025-06-04 12:47:15] 2025-06-04 16:46:58,887 | INFO     | exitcode: 0
[2025-06-04 12:47:15] 2025-06-04 16:46:58,887 | INFO     | exitmsg: OK
[2025-06-04 12:47:15] 2025-06-04 16:46:58,887 | INFO     | cpuconsumptiontime: 67387 s
[2025-06-04 12:47:15] 2025-06-04 16:46:58,887 | INFO     | nevents: 400
[2025-06-04 12:47:15] 2025-06-04 16:46:58,887 | INFO     | neventsw: 0
[2025-06-04 12:47:15] 2025-06-04 16:46:58,887 | INFO     | pid: 18052
[2025-06-04 12:47:15] 2025-06-04 16:46:58,887 | INFO     | pgrp: 18052
[2025-06-04 12:47:15] 2025-06-04 16:46:58,887 | INFO     | corecount: 8
[2025-06-04 12:47:15] 2025-06-04 16:46:58,888 | INFO     | event service: False
[2025-06-04 12:47:15] 2025-06-04 16:46:58,888 | INFO     | sizes: {0: 2397064, 1: 2397319, 7: 2397525, 12: 2397553, 8947: 2425589, 8948: 2434714, 8958: 2434828}
[2025-06-04 12:47:15] 2025-06-04 16:46:58,888 | INFO     | --------------------------------------------------
[2025-06-04 12:47:15] 2025-06-04 16:46:58,888 | INFO     | 
[2025-06-04 12:47:15] 2025-06-04 16:46:58,888 | INFO     | executing command: ls -lF /tmp/boinchome/slots/0
[2025-06-04 12:47:15] 2025-06-04 16:46:58,917 | INFO     | queue jobs had 0 job(s) [purged]
[2025-06-04 12:47:15] 2025-06-04 16:46:58,918 | INFO     | queue payloads had 0 job(s) [purged]
[2025-06-04 12:47:15] 2025-06-04 16:46:58,918 | INFO     | queue data_in had 0 job(s) [purged]
[2025-06-04 12:47:15] 2025-06-04 16:46:58,918 | INFO     | queue data_out had 0 job(s) [purged]
[2025-06-04 12:47:15] 2025-06-04 16:46:58,918 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-06-04 12:47:15] 2025-06-04 16:46:58,918 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-06-04 12:47:15] 2025-06-04 16:46:58,918 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-06-04 12:47:15] 2025-06-04 16:46:58,919 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-06-04 12:47:15] 2025-06-04 16:46:58,919 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-06-04 12:47:15] 2025-06-04 16:46:58,919 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-06-04 12:47:15] 2025-06-04 16:46:58,919 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-06-04 12:47:15] 2025-06-04 16:46:58,919 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-06-04 12:47:15] 2025-06-04 16:46:58,919 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-06-04 12:47:15] 2025-06-04 16:46:58,920 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-06-04 12:47:15] 2025-06-04 16:46:58,920 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-06-04 12:47:15] 2025-06-04 16:46:58,920 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-06-04 12:47:15] 2025-06-04 16:46:58,920 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-06-04 12:47:15] 2025-06-04 16:46:58,920 | INFO     | queue completed_jobids has 1 job(s)
[2025-06-04 12:47:15] 2025-06-04 16:46:58,920 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-06-04 12:47:15] 2025-06-04 16:46:58,921 | INFO     | queue messages had 0 job(s) [purged]
[2025-06-04 12:47:15] 2025-06-04 16:46:58,921 | INFO     | job 6679650226 has completed (purged errors)
[2025-06-04 12:47:15] 2025-06-04 16:46:58,921 | INFO     | overall cleanup function is called
[2025-06-04 12:47:15] 2025-06-04 16:46:59,930 | INFO     | --- collectZombieJob: --- 10, [18052]
[2025-06-04 12:47:15] 2025-06-04 16:46:59,930 | INFO     | zombie collector waiting for pid 18052
[2025-06-04 12:47:15] 2025-06-04 16:46:59,930 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-06-04 12:47:15] 2025-06-04 16:46:59,930 | INFO     | collected zombie processes
[2025-06-04 12:47:15] 2025-06-04 16:46:59,931 | INFO     | will attempt to kill all subprocesses of pid=18052
[2025-06-04 12:47:15] 2025-06-04 16:47:00,014 | INFO     | process IDs to be killed: [18052] (in reverse order)
[2025-06-04 12:47:15] 2025-06-04 16:47:00,072 | WARNING  | found no corresponding commands to process id(s)
[2025-06-04 12:47:15] 2025-06-04 16:47:00,072 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-06-04 12:47:15] 2025-06-04 16:47:00,077 | INFO     | did not find any defunct processes belonging to 18052
[2025-06-04 12:47:15] 2025-06-04 16:47:00,079 | INFO     | did not find any defunct processes belonging to 18052
[2025-06-04 12:47:15] 2025-06-04 16:47:00,079 | INFO     | ready for new job
[2025-06-04 12:47:15] 2025-06-04 16:47:00,079 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-06-04 12:47:15] 2025-06-04 16:47:00,081 | INFO     | **************************************
[2025-06-04 12:47:15] 2025-06-04 16:47:00,081 | INFO     | ***  PanDA Pilot version 3.10.2.2  ***
[2025-06-04 12:47:15] 2025-06-04 16:47:00,081 | INFO     | **************************************
[2025-06-04 12:47:15] 2025-06-04 16:47:00,082 | INFO     | 
[2025-06-04 12:47:15] 2025-06-04 16:47:00,082 | INFO     | architecture information:
[2025-06-04 12:47:15] 2025-06-04 16:47:00,083 | INFO     | executing command: cat /etc/os-release
[2025-06-04 12:47:15] 2025-06-04 16:47:00,102 | INFO     | cat /etc/os-release:
[2025-06-04 12:47:15] NAME="CentOS Linux"
[2025-06-04 12:47:15] VERSION="7 (Core)"
[2025-06-04 12:47:15] ID="centos"
[2025-06-04 12:47:15] ID_LIKE="rhel fedora"
[2025-06-04 12:47:15] VERSION_ID="7"
[2025-06-04 12:47:15] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-06-04 12:47:15] ANSI_COLOR="0;31"
[2025-06-04 12:47:15] CPE_NAME="cpe:/o:centos:centos:7"
[2025-06-04 12:47:15] HOME_URL="https://www.centos.org/"
[2025-06-04 12:47:15] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-06-04 12:47:15] 
[2025-06-04 12:47:15] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-06-04 12:47:15] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-06-04 12:47:15] REDHAT_SUPPORT_PRODUCT="centos"
[2025-06-04 12:47:15] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-06-04 12:47:15] 
[2025-06-04 12:47:15] 2025-06-04 16:47:00,102 | INFO     | **************************************
[2025-06-04 12:47:15] 2025-06-04 16:47:00,606 | INFO     | executing command: df -mP /tmp/boinchome/slots/0
[2025-06-04 12:47:15] 2025-06-04 16:47:00,626 | INFO     | sufficient remaining disk space (18592301056 B)
[2025-06-04 12:47:15] 2025-06-04 16:47:00,627 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-06-04 12:47:15] 2025-06-04 16:47:00,627 | INFO     | current server update state: UPDATING_FINAL
[2025-06-04 12:47:15] 2025-06-04 16:47:00,628 | INFO     | update_server=False
[2025-06-04 12:47:15] 2025-06-04 16:47:00,628 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-06-04 12:47:15] 2025-06-04 16:47:00,628 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-06-04 12:47:15] 2025-06-04 16:47:00,629 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-06-04 12:47:15] 2025-06-04 16:47:00,629 | INFO     | aborting loop
[2025-06-04 12:47:15] 2025-06-04 16:47:00,650 | INFO     | all data control threads have been joined
[2025-06-04 12:47:15] 2025-06-04 16:47:00,723 | INFO     | found 0 job(s) in 20 queues
[2025-06-04 12:47:15] 2025-06-04 16:47:00,723 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-06-04 12:47:15] 2025-06-04 16:47:00,723 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-06-04 12:47:15] 2025-06-04 16:47:00,961 | INFO     | all payload control threads have been joined
[2025-06-04 12:47:15] 2025-06-04 16:47:01,634 | INFO     | [job] retrieve thread has finished
[2025-06-04 12:47:15] 2025-06-04 16:47:01,635 | INFO     | [job] job monitor thread has finished
[2025-06-04 12:47:15] 2025-06-04 16:47:01,635 | INFO     | [job] queue monitor thread has finished
[2025-06-04 12:47:15] 2025-06-04 16:47:01,656 | INFO     | [data] control thread has finished
[2025-06-04 12:47:15] 2025-06-04 16:47:01,729 | INFO     | [payload] run_realtimelog thread has finished
[2025-06-04 12:47:15] 2025-06-04 16:47:01,774 | INFO     | all job control threads have been joined
[2025-06-04 12:47:15] 2025-06-04 16:47:01,834 | INFO     | [payload] validate_post thread has finished
[2025-06-04 12:47:15] 2025-06-04 16:47:01,966 | INFO     | [payload] control thread has finished
[2025-06-04 12:47:15] 2025-06-04 16:47:01,979 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-06-04 12:47:15] 2025-06-04 16:47:02,227 | INFO     | [payload] execute_payloads thread has finished
[2025-06-04 12:47:15] 2025-06-04 16:47:02,779 | INFO     | [job] control thread has finished
[2025-06-04 12:47:15] 2025-06-04 16:47:02,873 | INFO     | [payload] failed_post thread has finished
[2025-06-04 12:47:15] 2025-06-04 16:47:02,908 | INFO     | [payload] validate_pre thread has finished
[2025-06-04 12:47:15] 2025-06-04 16:47:02,914 | INFO     | [job] create_data_payload thread has finished
[2025-06-04 12:47:15] 2025-06-04 16:47:02,917 | INFO     | [job] validate thread has finished
[2025-06-04 12:47:15] 2025-06-04 16:47:02,925 | INFO     | [data] copytool_in thread has finished
[2025-06-04 12:47:15] 2025-06-04 16:47:03,985 | INFO     | [data] copytool_out thread has finished
[2025-06-04 12:47:15] 2025-06-04 16:47:04,058 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-06-04 12:47:15] 2025-06-04 16:47:08,064 | INFO     | [data] queue_monitor thread has finished
[2025-06-04 12:47:15] 2025-06-04 16:47:09,992 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140113017202496)>', '<ExcThread(monitor, started 140112721581824)>']
[2025-06-04 12:47:15] 2025-06-04 16:47:10,774 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-06-04 12:47:15] 2025-06-04 16:47:10,775 | INFO     | [monitor] control thread has ended
[2025-06-04 12:47:15] 2025-06-04 16:47:15,013 | INFO     | all workflow threads have been joined
[2025-06-04 12:47:15] 2025-06-04 16:47:15,013 | INFO     | end of generic workflow (traces error code: 0)
[2025-06-04 12:47:15] 2025-06-04 16:47:15,013 | INFO     | traces error code: 0
[2025-06-04 12:47:15] 2025-06-04 16:47:15,014 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-06-04 12:47:15] 2025-06-04 16:47:15,126 [wrapper] ==== pilot stdout END ====
[2025-06-04 12:47:15] 2025-06-04 16:47:15,131 [wrapper] ==== wrapper stdout RESUME ====
[2025-06-04 12:47:15] 2025-06-04 16:47:15,136 [wrapper] pilotpid: 10637
[2025-06-04 12:47:15] 2025-06-04 16:47:15,140 [wrapper] Pilot exit status: 0
[2025-06-04 12:47:15] 2025-06-04 16:47:15,160 [wrapper] pandaids: 6679650226
[2025-06-04 12:47:15] 2025-06-04 16:47:15,204 [wrapper] cleanup supervisor_pilot  4507 10638
[2025-06-04 12:47:15] 2025-06-04 16:47:15,209 [wrapper] Test setup, not cleaning
[2025-06-04 12:47:15] 2025-06-04 16:47:15,214 [wrapper] apfmon messages muted
[2025-06-04 12:47:15] 2025-06-04 16:47:15,218 [wrapper] ==== wrapper stdout END ====
[2025-06-04 12:47:15] 2025-06-04 16:47:15,223 [wrapper] ==== wrapper stderr END ====
[2025-06-04 12:47:15]  *** Error codes and diagnostics ***
[2025-06-04 12:47:15]     "exeErrorCode": 0,
[2025-06-04 12:47:15]     "exeErrorDiag": "",
[2025-06-04 12:47:15]     "pilotErrorCode": 0,
[2025-06-04 12:47:15]     "pilotErrorDiag": "",
[2025-06-04 12:47:15]  *** Listing of results directory ***
[2025-06-04 12:47:15] total 426024
[2025-06-04 12:47:15] -rw-r--r-- 1 boincer umatlas    495897 Jun  4 07:14 pilot3.tar.gz
[2025-06-04 12:47:15] -rwx------ 1 boincer umatlas     37140 Jun  4 07:22 runpilot2-wrapper.sh
[2025-06-04 12:47:15] -rw-r--r-- 1 boincer umatlas      5111 Jun  4 07:22 queuedata.json
[2025-06-04 12:47:15] -rw-r--r-- 1 boincer umatlas       100 Jun  4 10:17 wrapper_26015_x86_64-pc-linux-gnu
[2025-06-04 12:47:15] -rwxr-xr-x 1 boincer umatlas      7986 Jun  4 10:17 run_atlas
[2025-06-04 12:47:15] -rw-r--r-- 1 boincer umatlas       105 Jun  4 10:17 job.xml
[2025-06-04 12:47:15] -rw-r--r-- 2 boincer umatlas 225877054 Jun  4 10:17 EVNT.44871834._002775.pool.root.1
[2025-06-04 12:47:15] -rw-r--r-- 2 boincer umatlas     15093 Jun  4 10:17 start_atlas.sh
[2025-06-04 12:47:15] drwxrwx--x 2 boincer umatlas      4096 Jun  4 10:17 shared
[2025-06-04 12:47:15] -rw-r--r-- 2 boincer umatlas    508876 Jun  4 10:17 input.tar.gz
[2025-06-04 12:47:15] -rw-r--r-- 1 boincer umatlas         0 Jun  4 10:17 boinc_lockfile
[2025-06-04 12:47:15] -rw-r--r-- 1 boincer umatlas      2558 Jun  4 10:17 pandaJob.out
[2025-06-04 12:47:15] -rw------- 1 boincer umatlas    986819 Jun  4 10:17 agis_schedconf.cvmfs.json
[2025-06-04 12:47:15] -rw------- 1 boincer umatlas   1598969 Jun  4 10:17 agis_ddmendpoints.agis.ALL.json
[2025-06-04 12:47:15] drwx------ 4 boincer umatlas      4096 Jun  4 10:17 pilot3
[2025-06-04 12:47:15] -rw-r--r-- 1 boincer umatlas      5824 Jun  4 12:45 init_data.xml
[2025-06-04 12:47:15] -rw-r--r-- 1 boincer umatlas       529 Jun  4 12:46 boinc_task_state.xml
[2025-06-04 12:47:15] -rw------- 1 boincer umatlas 204204978 Jun  4 12:46 HITS.44871837._102209.pool.root.1
[2025-06-04 12:47:15] -rw------- 1 boincer umatlas        95 Jun  4 12:46 pilot_heartbeat.json
[2025-06-04 12:47:15] -rw------- 1 boincer umatlas      1051 Jun  4 12:46 memory_monitor_summary.json
[2025-06-04 12:47:15] -rw------- 1 boincer umatlas    357697 Jun  4 12:46 log.44871837._102209.job.log.tgz.1
[2025-06-04 12:47:15] -rw------- 1 boincer umatlas      7745 Jun  4 12:46 heartbeat.json
[2025-06-04 12:47:15] -rw-r--r-- 1 boincer umatlas        27 Jun  4 12:47 wrapper_checkpoint.txt
[2025-06-04 12:47:15] -rw-r--r-- 1 boincer umatlas      8192 Jun  4 12:47 boinc_mmap_file
[2025-06-04 12:47:15] -rw------- 1 boincer umatlas      4353 Jun  4 12:47 pilotlog.txt
[2025-06-04 12:47:15] -rw------- 1 boincer umatlas    811896 Jun  4 12:47 log.44871837._102209.job.log.1
[2025-06-04 12:47:15] -rw------- 1 boincer umatlas       357 Jun  4 12:47 output.list
[2025-06-04 12:47:15] -rw-r--r-- 1 boincer umatlas       620 Jun  4 12:47 runtime_log
[2025-06-04 12:47:15] -rw------- 1 boincer umatlas   1187840 Jun  4 12:47 result.tar.gz
[2025-06-04 12:47:15] -rw-r--r-- 1 boincer umatlas      8654 Jun  4 12:47 runtime_log.err
[2025-06-04 12:47:15] -rw------- 1 boincer umatlas       659 Jun  4 12:47 gXQKDmON1g7n9Rq4apOajLDm4fhM0noT9bVof3QYDmg2aKDmnvUyum.diag
[2025-06-04 12:47:15] -rw-r--r-- 1 boincer umatlas     20745 Jun  4 12:47 stderr.txt
[2025-06-04 12:47:15] HITS file was successfully produced:
[2025-06-04 12:47:15] -rw------- 1 boincer umatlas 204204978 Jun  4 12:46 shared/HITS.pool.root.1
[2025-06-04 12:47:15]  *** Contents of shared directory: ***
[2025-06-04 12:47:15] total 421684
[2025-06-04 12:47:15] -rw-r--r-- 2 boincer umatlas 225877054 Jun  4 10:17 ATLAS.root_0
[2025-06-04 12:47:15] -rw-r--r-- 2 boincer umatlas     15093 Jun  4 10:17 start_atlas.sh
[2025-06-04 12:47:15] -rw-r--r-- 2 boincer umatlas    508876 Jun  4 10:17 input.tar.gz
[2025-06-04 12:47:15] -rw------- 1 boincer umatlas 204204978 Jun  4 12:46 HITS.pool.root.1
[2025-06-04 12:47:15] -rw------- 1 boincer umatlas   1187840 Jun  4 12:47 result.tar.gz
12:47:16 (7050): run_atlas exited; CPU time 67336.392394
12:47:16 (7050): called boinc_finish(0)

</stderr_txt>
]]>

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