Stderr output

<core_client_version>7.7.0</core_client_version>
<![CDATA[
<stderr_txt>
10:13:38 (10804): wrapper (7.7.26015): starting
10:13:38 (10804): wrapper: running run_atlas (--nthreads 8)
[2025-06-04 10:13:38] Arguments: --nthreads 8
[2025-06-04 10:13:38] Threads: 8
[2025-06-04 10:13:38] Checking for CVMFS
[2025-06-04 10:13:38] Probing /cvmfs/atlas.cern.ch... OK
[2025-06-04 10:13:38] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-06-04 10:13:38] Running cvmfs_config stat atlas.cern.ch
[2025-06-04 10:13:38] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-06-04 10:13:38] 2.11.2.0 2886 35740 71188 146781 2 56 17615403 20275200 1 130560 0 11749497 99.976 6691765 8097 http://cvmfs-s1fnal.opensciencegrid.org:8000/cvmfs/atlas.cern.ch http://192.41.237.109:6081 1
[2025-06-04 10:13:38] CVMFS is ok
[2025-06-04 10:13:38] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-06-04 10:13:38] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2025-06-04 10:13:38] Further information can be found at the LHC@home message board.
[2025-06-04 10:13:38] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-06-04 10:13:38] Checking for apptainer binary...
[2025-06-04 10:13:38] Using apptainer found in PATH at /usr/bin/apptainer
[2025-06-04 10:13:38] Running /usr/bin/apptainer --version
[2025-06-04 10:13:38] apptainer version 1.3.2-1.el7
[2025-06-04 10:13:38] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-06-04 10:13:40] c-115-10.aglt2.org
[2025-06-04 10:13:40] apptainer works
[2025-06-04 10:13:40] Set ATHENA_PROC_NUMBER=8
[2025-06-04 10:13:40] Set ATHENA_CORE_NUMBER=8
[2025-06-04 10:13:40] Starting ATLAS job with PandaID=6679725980
[2025-06-04 10:13:40] Running command: /usr/bin/apptainer exec -B /cvmfs,/tmp/boinchome/slots/0 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-06-04 11:54:36]  *** The last 200 lines of the pilot log: ***
[2025-06-04 11:54:36]  filetype=log
[2025-06-04 11:54:36]  guid=d4dceca6-5097-4d9a-a947-0aebd161103a
[2025-06-04 11:54:36]  inputddms=['NDGF-T1_DATADISK', 'CERN-PROD_DATADISK']
[2025-06-04 11:54:36]  is_altstaged=None
[2025-06-04 11:54:36]  is_tar=False
[2025-06-04 11:54:36]  lfn=log.45006595._056660.job.log.tgz.1
[2025-06-04 11:54:36]  mtime=0
[2025-06-04 11:54:36]  protocol_id=None
[2025-06-04 11:54:36]  protocols=[{'endpoint': 'davs://dav.ndgf.org:443', 'flavour': 'WEBDAV', 'id': 331, 'path': '/atlas/disk/atlasdatadisk/rucio/'}]
[2025-06-04 11:54:36]  replicas=None
[2025-06-04 11:54:36]  scope=mc23_13p6TeV
[2025-06-04 11:54:36]  status=None
[2025-06-04 11:54:36]  status_code=0
[2025-06-04 11:54:36]  storage_token=
[2025-06-04 11:54:36]  surl=/tmp/boinchome/slots/0/PanDA_Pilot-6679725980/log.45006595._056660.job.log.tgz.1
[2025-06-04 11:54:36]  turl=davs://dav.ndgf.org:443/atlas/disk/atlasdatadisk/rucio/mc23_13p6TeV/a1/d9/log.45006595._056660.job.log.tgz.1
[2025-06-04 11:54:36]  workdir=None
[2025-06-04 11:54:36] ]
[2025-06-04 11:54:36] 2025-06-04 15:54:14,746 | INFO     | transferring file log.45006595._056660.job.log.tgz.1 from /tmp/boinchome/slots/0/PanDA_Pilot-6679725980/log.45006595._056660.job.log.tgz.1 to /tmp/boinchome/slots/
[2025-06-04 11:54:36] 2025-06-04 15:54:14,747 | INFO     | executing command: /usr/bin/env mv /tmp/boinchome/slots/0/PanDA_Pilot-6679725980/log.45006595._056660.job.log.tgz.1 /tmp/boinchome/slots/0/log.45006595._056660.job
[2025-06-04 11:54:36] 2025-06-04 15:54:14,772 | INFO     | adding to output.list: log.45006595._056660.job.log.tgz.1 davs://dav.ndgf.org:443/atlas/disk/atlasdatadisk/rucio/mc23_13p6TeV/a1/d9/log.45006595._056660.job.log.tg
[2025-06-04 11:54:36] 2025-06-04 15:54:14,774 | INFO     | alt stage-out settings: ['pl', 'write_lan', 'w', 'default'], allow_altstageout=False, remain_files=0, has_altstorage=True
[2025-06-04 11:54:36] 2025-06-04 15:54:14,774 | INFO     | summary of transferred files:
[2025-06-04 11:54:36] 2025-06-04 15:54:14,774 | INFO     |  -- lfn=log.45006595._056660.job.log.tgz.1, status_code=0, status=transferred
[2025-06-04 11:54:36] 2025-06-04 15:54:14,775 | INFO     | stage-out finished correctly
[2025-06-04 11:54:36] 2025-06-04 15:54:14,861 | INFO     | finished stage-out for finished payload, adding job to finished_jobs queue
[2025-06-04 11:54:36] 2025-06-04 15:54:14,944 | INFO     | job 6679725980 has state=finished
[2025-06-04 11:54:36] 2025-06-04 15:54:14,945 | INFO     | preparing for final server update for job 6679725980 in state='finished'
[2025-06-04 11:54:36] 2025-06-04 15:54:14,946 | INFO     | this job has now completed (state=finished)
[2025-06-04 11:54:36] 2025-06-04 15:54:14,946 | INFO     | pilot will not update the server (heartbeat message will be written to file)
[2025-06-04 11:54:36] 2025-06-04 15:54:14,946 | INFO     | log transfer has been attempted: DONE
[2025-06-04 11:54:36] 2025-06-04 15:54:14,946 | INFO     | job 6679725980 has finished - writing final server update
[2025-06-04 11:54:36] 2025-06-04 15:54:14,947 | INFO     | total number of processed events: 400 (read)
[2025-06-04 11:54:36] 2025-06-04 15:54:14,949 | INFO     | executing command: lscpu
[2025-06-04 11:54:36] 2025-06-04 15:54:14,979 | INFO     | executing command: export ATLAS_LOCAL_ROOT_BASE=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase;source ${ATLAS_LOCAL_ROOT_BASE}/user/atlasLocalSetup.sh --quiet;lsetup
[2025-06-04 11:54:36] 2025-06-04 15:54:15,092 | INFO     | PID=14460 has CPU usage=6.8% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i PR 
[2025-06-04 11:54:36] 2025-06-04 15:54:19,221 | WARNING  | process 20913 can no longer be monitored (due to stat problems) - aborting
[2025-06-04 11:54:36] 2025-06-04 15:54:19,221 | INFO     | using path: /tmp/boinchome/slots/0/PanDA_Pilot-6679725980/memory_monitor_summary.json (trf name=prmon)
[2025-06-04 11:54:36] 2025-06-04 15:54:19,306 | INFO     | number of running child processes to parent process 20913: 1
[2025-06-04 11:54:36] 2025-06-04 15:54:19,306 | INFO     | maximum number of monitored processes: 6
[2025-06-04 11:54:36] 2025-06-04 15:54:20,233 | INFO     | CPU arch script returned: x86-64-v2
[2025-06-04 11:54:36] 2025-06-04 15:54:20,233 | INFO     | using path: /tmp/boinchome/slots/0/PanDA_Pilot-6679725980/memory_monitor_summary.json (trf name=prmon)
[2025-06-04 11:54:36] 2025-06-04 15:54:20,234 | INFO     | extracted standard info from prmon json
[2025-06-04 11:54:36] 2025-06-04 15:54:20,235 | INFO     | extracted standard memory fields from prmon json
[2025-06-04 11:54:36] 2025-06-04 15:54:20,235 | WARNING  | GPU info not found in prmon json: 'gpu'
[2025-06-04 11:54:36] 2025-06-04 15:54:20,235 | WARNING  | format EVNTtoHITS has no such key: dbData
[2025-06-04 11:54:36] 2025-06-04 15:54:20,235 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2025-06-04 11:54:36] 2025-06-04 15:54:20,239 | INFO     | fitting pss+swap vs Time
[2025-06-04 11:54:36] 2025-06-04 15:54:20,239 | INFO     | sum of square deviations: 241429643.0
[2025-06-04 11:54:36] 2025-06-04 15:54:20,240 | INFO     | sum of deviations: -8828902069.500002
[2025-06-04 11:54:36] 2025-06-04 15:54:20,240 | INFO     | mean x: 1749049549.5
[2025-06-04 11:54:36] 2025-06-04 15:54:20,240 | INFO     | mean y: 2531622.902173913
[2025-06-04 11:54:36] 2025-06-04 15:54:20,240 | INFO     | -- intersect: 63963969809.83847
[2025-06-04 11:54:36] 2025-06-04 15:54:20,240 | INFO     | intersect: 63963969809.83847
[2025-06-04 11:54:36] 2025-06-04 15:54:20,241 | INFO     | chi2: 0.09029316019888792
[2025-06-04 11:54:36] 2025-06-04 15:54:20,241 | INFO     | -- intersect: 63963969809.83847
[2025-06-04 11:54:36] 2025-06-04 15:54:20,241 | INFO     | current memory leak: -36.57 B/s (using 92 data points, chi2=0.09)
[2025-06-04 11:54:36] 2025-06-04 15:54:20,241 | INFO     | ..............................
[2025-06-04 11:54:36] 2025-06-04 15:54:20,241 | INFO     | . Timing measurements:
[2025-06-04 11:54:36] 2025-06-04 15:54:20,242 | INFO     | . get job = 0 s
[2025-06-04 11:54:36] 2025-06-04 15:54:20,242 | INFO     | . initial setup = 2 s
[2025-06-04 11:54:36] 2025-06-04 15:54:20,242 | INFO     | . payload setup = 11 s
[2025-06-04 11:54:36] 2025-06-04 15:54:20,242 | INFO     | . stage-in = 0 s
[2025-06-04 11:54:36] 2025-06-04 15:54:20,242 | INFO     | . payload execution = 5986 s
[2025-06-04 11:54:36] 2025-06-04 15:54:20,242 | INFO     | . stage-out = 0 s
[2025-06-04 11:54:36] 2025-06-04 15:54:20,242 | INFO     | . log creation = 0 s
[2025-06-04 11:54:36] 2025-06-04 15:54:20,242 | INFO     | ..............................
[2025-06-04 11:54:36] 2025-06-04 15:54:20,328 | INFO     | 
[2025-06-04 11:54:36] 2025-06-04 15:54:20,329 | INFO     | job summary report
[2025-06-04 11:54:36] 2025-06-04 15:54:20,329 | INFO     | --------------------------------------------------
[2025-06-04 11:54:36] 2025-06-04 15:54:20,329 | INFO     | PanDA job id: 6679725980
[2025-06-04 11:54:36] 2025-06-04 15:54:20,329 | INFO     | task id: 45006595
[2025-06-04 11:54:36] 2025-06-04 15:54:20,329 | INFO     | errors: (none)
[2025-06-04 11:54:36] 2025-06-04 15:54:20,330 | INFO     | status: LOG_TRANSFER = DONE 
[2025-06-04 11:54:36] 2025-06-04 15:54:20,330 | INFO     | pilot state: finished 
[2025-06-04 11:54:36] 2025-06-04 15:54:20,330 | INFO     | transexitcode: 0
[2025-06-04 11:54:36] 2025-06-04 15:54:20,330 | INFO     | exeerrorcode: 0
[2025-06-04 11:54:36] 2025-06-04 15:54:20,330 | INFO     | exeerrordiag: 
[2025-06-04 11:54:36] 2025-06-04 15:54:20,330 | INFO     | exitcode: 0
[2025-06-04 11:54:36] 2025-06-04 15:54:20,331 | INFO     | exitmsg: OK
[2025-06-04 11:54:36] 2025-06-04 15:54:20,331 | INFO     | cpuconsumptiontime: 44509 s
[2025-06-04 11:54:36] 2025-06-04 15:54:20,331 | INFO     | nevents: 400
[2025-06-04 11:54:36] 2025-06-04 15:54:20,331 | INFO     | neventsw: 0
[2025-06-04 11:54:36] 2025-06-04 15:54:20,331 | INFO     | pid: 20913
[2025-06-04 11:54:36] 2025-06-04 15:54:20,331 | INFO     | pgrp: 20913
[2025-06-04 11:54:36] 2025-06-04 15:54:20,332 | INFO     | corecount: 8
[2025-06-04 11:54:36] 2025-06-04 15:54:20,332 | INFO     | event service: False
[2025-06-04 11:54:36] 2025-06-04 15:54:20,332 | INFO     | sizes: {0: 2397291, 6: 2397497, 11: 2397525, 6001: 2424102, 6002: 2433099, 6007: 2433213}
[2025-06-04 11:54:36] 2025-06-04 15:54:20,332 | INFO     | --------------------------------------------------
[2025-06-04 11:54:36] 2025-06-04 15:54:20,332 | INFO     | 
[2025-06-04 11:54:36] 2025-06-04 15:54:20,333 | INFO     | executing command: ls -lF /tmp/boinchome/slots/0
[2025-06-04 11:54:36] 2025-06-04 15:54:20,359 | INFO     | queue jobs had 0 job(s) [purged]
[2025-06-04 11:54:36] 2025-06-04 15:54:20,359 | INFO     | queue payloads had 0 job(s) [purged]
[2025-06-04 11:54:36] 2025-06-04 15:54:20,360 | INFO     | queue data_in had 0 job(s) [purged]
[2025-06-04 11:54:36] 2025-06-04 15:54:20,360 | INFO     | queue data_out had 0 job(s) [purged]
[2025-06-04 11:54:36] 2025-06-04 15:54:20,360 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-06-04 11:54:36] 2025-06-04 15:54:20,360 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-06-04 11:54:36] 2025-06-04 15:54:20,360 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-06-04 11:54:36] 2025-06-04 15:54:20,361 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-06-04 11:54:36] 2025-06-04 15:54:20,361 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-06-04 11:54:36] 2025-06-04 15:54:20,361 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-06-04 11:54:36] 2025-06-04 15:54:20,361 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-06-04 11:54:36] 2025-06-04 15:54:20,361 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-06-04 11:54:36] 2025-06-04 15:54:20,361 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-06-04 11:54:36] 2025-06-04 15:54:20,362 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-06-04 11:54:36] 2025-06-04 15:54:20,362 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-06-04 11:54:36] 2025-06-04 15:54:20,362 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-06-04 11:54:36] 2025-06-04 15:54:20,362 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-06-04 11:54:36] 2025-06-04 15:54:20,362 | INFO     | queue completed_jobids has 1 job(s)
[2025-06-04 11:54:36] 2025-06-04 15:54:20,362 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-06-04 11:54:36] 2025-06-04 15:54:20,363 | INFO     | queue messages had 0 job(s) [purged]
[2025-06-04 11:54:36] 2025-06-04 15:54:20,363 | INFO     | job 6679725980 has completed (purged errors)
[2025-06-04 11:54:36] 2025-06-04 15:54:20,363 | INFO     | overall cleanup function is called
[2025-06-04 11:54:36] 2025-06-04 15:54:21,371 | INFO     | --- collectZombieJob: --- 10, [20913]
[2025-06-04 11:54:36] 2025-06-04 15:54:21,371 | INFO     | zombie collector waiting for pid 20913
[2025-06-04 11:54:36] 2025-06-04 15:54:21,372 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-06-04 11:54:36] 2025-06-04 15:54:21,372 | INFO     | collected zombie processes
[2025-06-04 11:54:36] 2025-06-04 15:54:21,372 | INFO     | will attempt to kill all subprocesses of pid=20913
[2025-06-04 11:54:36] 2025-06-04 15:54:21,456 | INFO     | process IDs to be killed: [20913] (in reverse order)
[2025-06-04 11:54:36] 2025-06-04 15:54:21,512 | WARNING  | found no corresponding commands to process id(s)
[2025-06-04 11:54:36] 2025-06-04 15:54:21,512 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-06-04 11:54:36] 2025-06-04 15:54:21,516 | INFO     | did not find any defunct processes belonging to 20913
[2025-06-04 11:54:36] 2025-06-04 15:54:21,520 | INFO     | did not find any defunct processes belonging to 20913
[2025-06-04 11:54:36] 2025-06-04 15:54:21,520 | INFO     | ready for new job
[2025-06-04 11:54:36] 2025-06-04 15:54:21,521 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-06-04 11:54:36] 2025-06-04 15:54:21,522 | INFO     | **************************************
[2025-06-04 11:54:36] 2025-06-04 15:54:21,522 | INFO     | ***  PanDA Pilot version 3.10.2.2  ***
[2025-06-04 11:54:36] 2025-06-04 15:54:21,522 | INFO     | **************************************
[2025-06-04 11:54:36] 2025-06-04 15:54:21,522 | INFO     | 
[2025-06-04 11:54:36] 2025-06-04 15:54:21,523 | INFO     | architecture information:
[2025-06-04 11:54:36] 2025-06-04 15:54:21,523 | INFO     | executing command: cat /etc/os-release
[2025-06-04 11:54:36] 2025-06-04 15:54:21,540 | INFO     | cat /etc/os-release:
[2025-06-04 11:54:36] NAME="CentOS Linux"
[2025-06-04 11:54:36] VERSION="7 (Core)"
[2025-06-04 11:54:36] ID="centos"
[2025-06-04 11:54:36] ID_LIKE="rhel fedora"
[2025-06-04 11:54:36] VERSION_ID="7"
[2025-06-04 11:54:36] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-06-04 11:54:36] ANSI_COLOR="0;31"
[2025-06-04 11:54:36] CPE_NAME="cpe:/o:centos:centos:7"
[2025-06-04 11:54:36] HOME_URL="https://www.centos.org/"
[2025-06-04 11:54:36] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-06-04 11:54:36] 
[2025-06-04 11:54:36] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-06-04 11:54:36] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-06-04 11:54:36] REDHAT_SUPPORT_PRODUCT="centos"
[2025-06-04 11:54:36] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-06-04 11:54:36] 
[2025-06-04 11:54:36] 2025-06-04 15:54:21,540 | INFO     | **************************************
[2025-06-04 11:54:36] 2025-06-04 15:54:22,044 | INFO     | executing command: df -mP /tmp/boinchome/slots/0
[2025-06-04 11:54:36] 2025-06-04 15:54:22,065 | INFO     | sufficient remaining disk space (18649972736 B)
[2025-06-04 11:54:36] 2025-06-04 15:54:22,066 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-06-04 11:54:36] 2025-06-04 15:54:22,066 | INFO     | current server update state: UPDATING_FINAL
[2025-06-04 11:54:36] 2025-06-04 15:54:22,066 | INFO     | update_server=False
[2025-06-04 11:54:36] 2025-06-04 15:54:22,066 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-06-04 11:54:36] 2025-06-04 15:54:22,067 | WARNING  | aborting monitor loop since graceful_stop has been set (timing out remaining threads)
[2025-06-04 11:54:36] 2025-06-04 15:54:22,068 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-06-04 11:54:36] 2025-06-04 15:54:22,068 | INFO     | found 0 job(s) in 20 queues
[2025-06-04 11:54:36] 2025-06-04 15:54:22,069 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-06-04 11:54:36] 2025-06-04 15:54:22,069 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-06-04 11:54:36] 2025-06-04 15:54:22,383 | INFO     | all data control threads have been joined
[2025-06-04 11:54:36] 2025-06-04 15:54:22,765 | INFO     | all payload control threads have been joined
[2025-06-04 11:54:36] 2025-06-04 15:54:22,819 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-06-04 11:54:36] 2025-06-04 15:54:22,819 | INFO     | aborting loop
[2025-06-04 11:54:36] 2025-06-04 15:54:22,873 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-06-04 11:54:36] 2025-06-04 15:54:23,072 | INFO     | [job] retrieve thread has finished
[2025-06-04 11:54:36] 2025-06-04 15:54:23,074 | INFO     | [job] queue monitor thread has finished
[2025-06-04 11:54:36] 2025-06-04 15:54:23,389 | INFO     | [data] control thread has finished
[2025-06-04 11:54:36] 2025-06-04 15:54:23,532 | INFO     | all job control threads have been joined
[2025-06-04 11:54:36] 2025-06-04 15:54:23,628 | INFO     | [payload] failed_post thread has finished
[2025-06-04 11:54:36] 2025-06-04 15:54:23,712 | INFO     | [job] validate thread has finished
[2025-06-04 11:54:36] 2025-06-04 15:54:23,772 | INFO     | [payload] control thread has finished
[2025-06-04 11:54:36] 2025-06-04 15:54:23,822 | INFO     | [job] job monitor thread has finished
[2025-06-04 11:54:36] 2025-06-04 15:54:23,894 | INFO     | [payload] execute_payloads thread has finished
[2025-06-04 11:54:36] 2025-06-04 15:54:24,028 | INFO     | [job] create_data_payload thread has finished
[2025-06-04 11:54:36] 2025-06-04 15:54:24,035 | INFO     | [payload] validate_pre thread has finished
[2025-06-04 11:54:36] 2025-06-04 15:54:24,037 | INFO     | [data] copytool_in thread has finished
[2025-06-04 11:54:36] 2025-06-04 15:54:24,308 | INFO     | [payload] run_realtimelog thread has finished
[2025-06-04 11:54:36] 2025-06-04 15:54:24,538 | INFO     | [job] control thread has finished
[2025-06-04 11:54:36] 2025-06-04 15:54:24,579 | INFO     | [payload] validate_post thread has finished
[2025-06-04 11:54:36] 2025-06-04 15:54:24,878 | INFO     | [data] copytool_out thread has finished
[2025-06-04 11:54:36] 2025-06-04 15:54:25,454 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-06-04 11:54:36] 2025-06-04 15:54:29,460 | INFO     | [data] queue_monitor thread has finished
[2025-06-04 11:54:36] 2025-06-04 15:54:31,552 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140391518340928)>', '<ExcThread(monitor, started 140390820714240)>']
[2025-06-04 11:54:36] 2025-06-04 15:54:32,118 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-06-04 11:54:36] 2025-06-04 15:54:32,118 | INFO     | [monitor] control thread has ended
[2025-06-04 11:54:36] 2025-06-04 15:54:36,578 | INFO     | all workflow threads have been joined
[2025-06-04 11:54:36] 2025-06-04 15:54:36,578 | INFO     | end of generic workflow (traces error code: 0)
[2025-06-04 11:54:36] 2025-06-04 15:54:36,579 | INFO     | traces error code: 0
[2025-06-04 11:54:36] 2025-06-04 15:54:36,579 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-06-04 11:54:36] 2025-06-04 15:54:36,698 [wrapper] ==== pilot stdout END ====
[2025-06-04 11:54:36] 2025-06-04 15:54:36,703 [wrapper] ==== wrapper stdout RESUME ====
[2025-06-04 11:54:36] 2025-06-04 15:54:36,707 [wrapper] pilotpid: 14460
[2025-06-04 11:54:36] 2025-06-04 15:54:36,712 [wrapper] Pilot exit status: 0
[2025-06-04 11:54:36] 2025-06-04 15:54:36,731 [wrapper] pandaids: 6679725980
[2025-06-04 11:54:36] 2025-06-04 15:54:36,776 [wrapper] cleanup supervisor_pilot  6269 14461
[2025-06-04 11:54:36] 2025-06-04 15:54:36,780 [wrapper] Test setup, not cleaning
[2025-06-04 11:54:36] 2025-06-04 15:54:36,785 [wrapper] apfmon messages muted
[2025-06-04 11:54:36] 2025-06-04 15:54:36,790 [wrapper] ==== wrapper stdout END ====
[2025-06-04 11:54:36] 2025-06-04 15:54:36,794 [wrapper] ==== wrapper stderr END ====
[2025-06-04 11:54:36]  *** Error codes and diagnostics ***
[2025-06-04 11:54:36]     "exeErrorCode": 0,
[2025-06-04 11:54:36]     "exeErrorDiag": "",
[2025-06-04 11:54:36]     "pilotErrorCode": 0,
[2025-06-04 11:54:36]     "pilotErrorDiag": "",
[2025-06-04 11:54:36]  *** Listing of results directory ***
[2025-06-04 11:54:36] total 385428
[2025-06-04 11:54:36] -rw-r--r-- 1 boincer umatlas    495897 Jun  4 09:10 pilot3.tar.gz
[2025-06-04 11:54:36] -rw-r--r-- 1 boincer umatlas      5111 Jun  4 09:21 queuedata.json
[2025-06-04 11:54:36] -rwx------ 1 boincer umatlas     37140 Jun  4 09:22 runpilot2-wrapper.sh
[2025-06-04 11:54:36] -rw-r--r-- 1 boincer umatlas       100 Jun  4 10:13 wrapper_26015_x86_64-pc-linux-gnu
[2025-06-04 11:54:36] -rwxr-xr-x 1 boincer umatlas      7986 Jun  4 10:13 run_atlas
[2025-06-04 11:54:36] -rw-r--r-- 1 boincer umatlas       105 Jun  4 10:13 job.xml
[2025-06-04 11:54:36] -rw-r--r-- 2 boincer umatlas 214868394 Jun  4 10:13 EVNT.45006593._001951.pool.root.1
[2025-06-04 11:54:36] -rw-r--r-- 2 boincer umatlas     15093 Jun  4 10:13 start_atlas.sh
[2025-06-04 11:54:36] drwxrwx--x 2 boincer umatlas      4096 Jun  4 10:13 shared
[2025-06-04 11:54:36] -rw-r--r-- 2 boincer umatlas    508885 Jun  4 10:13 input.tar.gz
[2025-06-04 11:54:36] -rw-r--r-- 1 boincer umatlas         0 Jun  4 10:13 boinc_lockfile
[2025-06-04 11:54:36] -rw-r--r-- 1 boincer umatlas      2524 Jun  4 10:13 pandaJob.out
[2025-06-04 11:54:36] -rw------- 1 boincer umatlas    986819 Jun  4 10:13 agis_schedconf.cvmfs.json
[2025-06-04 11:54:36] -rw------- 1 boincer umatlas   1598969 Jun  4 10:13 agis_ddmendpoints.agis.ALL.json
[2025-06-04 11:54:36] drwx------ 4 boincer umatlas      4096 Jun  4 10:13 pilot3
[2025-06-04 11:54:36] -rw-r--r-- 1 boincer umatlas      5825 Jun  4 11:48 init_data.xml
[2025-06-04 11:54:36] -rw------- 1 boincer umatlas 174233080 Jun  4 11:53 HITS.45006595._056660.pool.root.1
[2025-06-04 11:54:36] -rw------- 1 boincer umatlas      1063 Jun  4 11:54 memory_monitor_summary.json
[2025-06-04 11:54:36] -rw-r--r-- 1 boincer umatlas      8192 Jun  4 11:54 boinc_mmap_file
[2025-06-04 11:54:36] -rw-r--r-- 1 boincer umatlas        27 Jun  4 11:54 wrapper_checkpoint.txt
[2025-06-04 11:54:36] -rw------- 1 boincer umatlas        95 Jun  4 11:54 pilot_heartbeat.json
[2025-06-04 11:54:36] -rw-r--r-- 1 boincer umatlas       529 Jun  4 11:54 boinc_task_state.xml
[2025-06-04 11:54:36] -rw------- 1 boincer umatlas    313839 Jun  4 11:54 log.45006595._056660.job.log.tgz.1
[2025-06-04 11:54:36] -rw------- 1 boincer umatlas      7751 Jun  4 11:54 heartbeat.json
[2025-06-04 11:54:36] -rw------- 1 boincer umatlas      4476 Jun  4 11:54 pilotlog.txt
[2025-06-04 11:54:36] -rw------- 1 boincer umatlas    558474 Jun  4 11:54 log.45006595._056660.job.log.1
[2025-06-04 11:54:36] -rw------- 1 boincer umatlas       357 Jun  4 11:54 output.list
[2025-06-04 11:54:36] -rw-r--r-- 1 boincer umatlas       620 Jun  4 11:54 runtime_log
[2025-06-04 11:54:36] -rw------- 1 boincer umatlas    890880 Jun  4 11:54 result.tar.gz
[2025-06-04 11:54:36] -rw-r--r-- 1 boincer umatlas      8659 Jun  4 11:54 runtime_log.err
[2025-06-04 11:54:36] -rw------- 1 boincer umatlas       658 Jun  4 11:54 LBgKDmXF3g7n9Rq4apOajLDm4fhM0noT9bVof3QYDm92aKDmSOT8Io.diag
[2025-06-04 11:54:36] -rw-r--r-- 1 boincer umatlas     21287 Jun  4 11:54 stderr.txt
[2025-06-04 11:54:36] HITS file was successfully produced:
[2025-06-04 11:54:36] -rw------- 1 boincer umatlas 174233080 Jun  4 11:53 shared/HITS.pool.root.1
[2025-06-04 11:54:36]  *** Contents of shared directory: ***
[2025-06-04 11:54:36] total 381380
[2025-06-04 11:54:36] -rw-r--r-- 2 boincer umatlas 214868394 Jun  4 10:13 ATLAS.root_0
[2025-06-04 11:54:36] -rw-r--r-- 2 boincer umatlas     15093 Jun  4 10:13 start_atlas.sh
[2025-06-04 11:54:36] -rw-r--r-- 2 boincer umatlas    508885 Jun  4 10:13 input.tar.gz
[2025-06-04 11:54:36] -rw------- 1 boincer umatlas 174233080 Jun  4 11:53 HITS.pool.root.1
[2025-06-04 11:54:36] -rw------- 1 boincer umatlas    890880 Jun  4 11:54 result.tar.gz
11:54:38 (10804): run_atlas exited; CPU time 44463.523574
11:54:38 (10804): called boinc_finish(0)

</stderr_txt>
]]>

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