Stderr output

<core_client_version>7.20.2</core_client_version>
<![CDATA[
<stderr_txt>
00:33:31 (12267): wrapper (7.7.26015): starting
00:33:31 (12267): wrapper: running run_atlas (--nthreads 8)
[2025-06-05 00:33:31] Arguments: --nthreads 8
[2025-06-05 00:33:31] Threads: 8
[2025-06-05 00:33:31] Checking for CVMFS
[2025-06-05 00:33:32] Probing /cvmfs/atlas.cern.ch... OK
[2025-06-05 00:33:32] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-06-05 00:33:32] Running cvmfs_config stat atlas.cern.ch
[2025-06-05 00:33:33] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-06-05 00:33:33] 2.11.2.0 17022 33995 92520 146797 4 16 19834515 25165825 2745 130560 0 18058766 99.819 20052500 4657 http://s1cern-cvmfs.openhtc.io/cvmfs/atlas.cern.ch http://192.168.73.11:3128/ 1
[2025-06-05 00:33:33] CVMFS is ok
[2025-06-05 00:33:33] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-06-05 00:33:33] Checking for apptainer binary...
[2025-06-05 00:33:33] Using apptainer found in PATH at /usr/bin/apptainer
[2025-06-05 00:33:33] Running /usr/bin/apptainer --version
[2025-06-05 00:33:33] apptainer version 1.3.2-1.el7
[2025-06-05 00:33:33] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-06-05 01:04:08] cg-vwn241.simple-grid.lan
[2025-06-05 01:04:08] apptainer works
[2025-06-05 01:04:08] Set ATHENA_PROC_NUMBER=8
[2025-06-05 01:04:08] Set ATHENA_CORE_NUMBER=8
[2025-06-05 01:04:08] Starting ATLAS job with PandaID=6679735697
[2025-06-05 01:04:08] Running command: /usr/bin/apptainer exec -B /cvmfs,/var/lib/boinc/slots/13 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-06-05 05:10:24]  *** The last 200 lines of the pilot log: ***
[2025-06-05 05:10:24] 2025-06-05 02:59:39,257 | INFO     | extracted standard memory fields from prmon json
[2025-06-05 05:10:24] 2025-06-05 02:59:39,257 | WARNING  | GPU info not found in prmon json: 'gpu'
[2025-06-05 05:10:24] 2025-06-05 02:59:39,257 | WARNING  | format EVNTtoHITS has no such key: dbData
[2025-06-05 05:10:24] 2025-06-05 02:59:39,257 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2025-06-05 05:10:24] 2025-06-05 02:59:39,262 | INFO     | fitting pss+swap vs Time
[2025-06-05 05:10:24] 2025-06-05 02:59:39,263 | INFO     | sum of square deviations: 3256879670.0
[2025-06-05 05:10:24] 2025-06-05 02:59:39,265 | INFO     | sum of deviations: 9467351218.999998
[2025-06-05 05:10:24] 2025-06-05 02:59:39,265 | INFO     | mean x: 1749085588.0
[2025-06-05 05:10:24] 2025-06-05 02:59:39,265 | INFO     | mean y: 2481779.8675799086
[2025-06-05 05:10:24] 2025-06-05 02:59:39,265 | INFO     | -- intersect: -5081896291.026004
[2025-06-05 05:10:24] 2025-06-05 02:59:39,265 | INFO     | intersect: -5081896291.026004
[2025-06-05 05:10:24] 2025-06-05 02:59:39,266 | INFO     | chi2: 5.7890736549517
[2025-06-05 05:10:24] 2025-06-05 02:59:39,266 | INFO     | sum of square deviations: 3038856977.5
[2025-06-05 05:10:24] 2025-06-05 02:59:39,268 | INFO     | sum of deviations: 24126015358.500004
[2025-06-05 05:10:24] 2025-06-05 02:59:39,268 | INFO     | mean x: 1749085435.5
[2025-06-05 05:10:24] 2025-06-05 02:59:39,268 | INFO     | mean y: 2491846.761682243
[2025-06-05 05:10:24] 2025-06-05 02:59:39,269 | INFO     | -- intersect: -13883802372.625175
[2025-06-05 05:10:24] 2025-06-05 02:59:39,269 | INFO     | intersect: -13883802372.625175
[2025-06-05 05:10:24] 2025-06-05 02:59:39,269 | INFO     | chi2: 5.06906211714628
[2025-06-05 05:10:24] 2025-06-05 02:59:39,269 | INFO     | current chi2=5.06906211714628 (change=12.437422301399746 %)
[2025-06-05 05:10:24] 2025-06-05 02:59:39,269 | INFO     | right removable region: 213
[2025-06-05 05:10:24] 2025-06-05 02:59:39,270 | INFO     | sum of square deviations: 3038856977.5
[2025-06-05 05:10:24] 2025-06-05 02:59:39,272 | INFO     | sum of deviations: -62487243836.5
[2025-06-05 05:10:24] 2025-06-05 02:59:39,272 | INFO     | mean x: 1749085740.5
[2025-06-05 05:10:24] 2025-06-05 02:59:39,272 | INFO     | mean y: 2532016.4906542054
[2025-06-05 05:10:24] 2025-06-05 02:59:39,272 | INFO     | -- intersect: 35968537645.187164
[2025-06-05 05:10:24] 2025-06-05 02:59:39,272 | INFO     | intersect: 35968537645.187164
[2025-06-05 05:10:24] 2025-06-05 02:59:39,273 | INFO     | chi2: 1.5325854327965795
[2025-06-05 05:10:24] 2025-06-05 02:59:39,273 | INFO     | current chi2=1.5325854327965795 (change=73.52624056725071 %)
[2025-06-05 05:10:24] 2025-06-05 02:59:39,273 | INFO     | sum of square deviations: 2830787960.0
[2025-06-05 05:10:24] 2025-06-05 02:59:39,275 | INFO     | sum of deviations: -81415456942.00002
[2025-06-05 05:10:24] 2025-06-05 02:59:39,275 | INFO     | mean x: 1749085893.0
[2025-06-05 05:10:24] 2025-06-05 02:59:39,275 | INFO     | mean y: 2545760.033492823
[2025-06-05 05:10:24] 2025-06-05 02:59:39,275 | INFO     | -- intersect: 50307488843.58439
[2025-06-05 05:10:24] 2025-06-05 02:59:39,275 | INFO     | intersect: 50307488843.58439
[2025-06-05 05:10:24] 2025-06-05 02:59:39,276 | INFO     | chi2: 1.010847762374448
[2025-06-05 05:10:24] 2025-06-05 02:59:39,276 | INFO     | current chi2=1.010847762374448 (change=34.0429746529753 %)
[2025-06-05 05:10:24] 2025-06-05 02:59:39,276 | INFO     | sum of square deviations: 2632440055.0
[2025-06-05 05:10:24] 2025-06-05 02:59:39,278 | INFO     | sum of deviations: -76896405105.0
[2025-06-05 05:10:24] 2025-06-05 02:59:39,279 | INFO     | mean x: 1749086045.5
[2025-06-05 05:10:24] 2025-06-05 02:59:39,279 | INFO     | mean y: 2542273.1078431373
[2025-06-05 05:10:24] 2025-06-05 02:59:39,279 | INFO     | -- intersect: 51095226743.85468
[2025-06-05 05:10:24] 2025-06-05 02:59:39,279 | INFO     | intersect: 51095226743.85468
[2025-06-05 05:10:24] 2025-06-05 02:59:39,280 | INFO     | chi2: 1.0099019455626852
[2025-06-05 05:10:24] 2025-06-05 02:59:39,280 | INFO     | current chi2=1.0099019455626852 (change=0.09356669193600181 %)
[2025-06-05 05:10:24] 2025-06-05 02:59:39,280 | INFO     | left removable region: 30
[2025-06-05 05:10:24] 2025-06-05 02:59:39,280 | INFO     | sum of square deviations: 1900284932.0
[2025-06-05 05:10:24] 2025-06-05 02:59:39,282 | INFO     | sum of deviations: -42361157870.99999
[2025-06-05 05:10:24] 2025-06-05 02:59:39,282 | INFO     | mean x: 1749086320.0
[2025-06-05 05:10:24] 2025-06-05 02:59:39,282 | INFO     | mean y: 2538054.7213114756
[2025-06-05 05:10:24] 2025-06-05 02:59:39,282 | INFO     | -- intersect: 38993175976.34348
[2025-06-05 05:10:24] 2025-06-05 02:59:39,282 | INFO     | intersect: 38993175976.34348
[2025-06-05 05:10:24] 2025-06-05 02:59:39,283 | INFO     | chi2: 0.2002031712058002
[2025-06-05 05:10:24] 2025-06-05 02:59:39,283 | INFO     | -- intersect: 38993175976.34348
[2025-06-05 05:10:24] 2025-06-05 02:59:39,283 | INFO     | current memory leak: -22.29 B/s (using 183 data points, chi2=0.20)
[2025-06-05 05:10:24] 2025-06-05 02:59:39,284 | INFO     | ..............................
[2025-06-05 05:10:24] 2025-06-05 02:59:39,284 | INFO     | . Timing measurements:
[2025-06-05 05:10:24] 2025-06-05 02:59:39,284 | INFO     | . get job = 0 s
[2025-06-05 05:10:24] 2025-06-05 02:59:39,284 | INFO     | . initial setup = 7 s
[2025-06-05 05:10:24] 2025-06-05 02:59:39,284 | INFO     | . payload setup = 179 s
[2025-06-05 05:10:24] 2025-06-05 02:59:39,285 | INFO     | . stage-in = 0 s
[2025-06-05 05:10:24] 2025-06-05 02:59:39,285 | INFO     | . payload execution = 13483 s
[2025-06-05 05:10:24] 2025-06-05 02:59:39,285 | INFO     | . stage-out = 4 s
[2025-06-05 05:10:24] 2025-06-05 02:59:39,285 | INFO     | . log creation = 1 s
[2025-06-05 05:10:24] 2025-06-05 02:59:39,285 | INFO     | ..............................
[2025-06-05 05:10:24] 2025-06-05 02:59:39,608 | INFO     | 
[2025-06-05 05:10:24] 2025-06-05 02:59:39,609 | INFO     | job summary report
[2025-06-05 05:10:24] 2025-06-05 02:59:39,609 | INFO     | --------------------------------------------------
[2025-06-05 05:10:24] 2025-06-05 02:59:39,609 | INFO     | PanDA job id: 6679735697
[2025-06-05 05:10:24] 2025-06-05 02:59:39,609 | INFO     | task id: 45006595
[2025-06-05 05:10:24] 2025-06-05 02:59:39,609 | INFO     | errors: (none)
[2025-06-05 05:10:24] 2025-06-05 02:59:39,609 | INFO     | status: LOG_TRANSFER = DONE 
[2025-06-05 05:10:24] 2025-06-05 02:59:39,609 | INFO     | pilot state: finished 
[2025-06-05 05:10:24] 2025-06-05 02:59:39,609 | INFO     | transexitcode: 0
[2025-06-05 05:10:24] 2025-06-05 02:59:39,609 | INFO     | exeerrorcode: 0
[2025-06-05 05:10:24] 2025-06-05 02:59:39,610 | INFO     | exeerrordiag: 
[2025-06-05 05:10:24] 2025-06-05 02:59:39,610 | INFO     | exitcode: 0
[2025-06-05 05:10:24] 2025-06-05 02:59:39,610 | INFO     | exitmsg: OK
[2025-06-05 05:10:24] 2025-06-05 02:59:39,610 | INFO     | cpuconsumptiontime: 50709 s
[2025-06-05 05:10:24] 2025-06-05 02:59:39,610 | INFO     | nevents: 400
[2025-06-05 05:10:24] 2025-06-05 02:59:39,610 | INFO     | neventsw: 0
[2025-06-05 05:10:24] 2025-06-05 02:59:39,610 | INFO     | pid: 17346
[2025-06-05 05:10:24] 2025-06-05 02:59:39,610 | INFO     | pgrp: 17346
[2025-06-05 05:10:24] 2025-06-05 02:59:39,610 | INFO     | corecount: 8
[2025-06-05 05:10:24] 2025-06-05 02:59:39,610 | INFO     | event service: False
[2025-06-05 05:10:24] 2025-06-05 02:59:39,611 | INFO     | sizes: {0: 2396463, 1: 2397149, 2: 2397348, 13: 2397348, 23: 2397404, 34: 2397432, 45: 2397588, 55: 2397616, 66: 2397644, 77: 2397672, 86: 2397934, 88: 2398242, 13
[2025-06-05 05:10:24] 2025-06-05 02:59:39,611 | INFO     | --------------------------------------------------
[2025-06-05 05:10:24] 2025-06-05 02:59:39,611 | INFO     | 
[2025-06-05 05:10:24] 2025-06-05 02:59:39,611 | INFO     | executing command: ls -lF /var/lib/boinc/slots/13
[2025-06-05 05:10:24] 2025-06-05 02:59:39,947 | INFO     | queue jobs had 0 job(s) [purged]
[2025-06-05 05:10:24] 2025-06-05 02:59:39,947 | INFO     | queue payloads had 0 job(s) [purged]
[2025-06-05 05:10:24] 2025-06-05 02:59:39,947 | INFO     | queue data_in had 0 job(s) [purged]
[2025-06-05 05:10:24] 2025-06-05 02:59:39,948 | INFO     | queue data_out had 0 job(s) [purged]
[2025-06-05 05:10:24] 2025-06-05 02:59:39,948 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-06-05 05:10:24] 2025-06-05 02:59:39,948 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-06-05 05:10:24] 2025-06-05 02:59:39,948 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-06-05 05:10:24] 2025-06-05 02:59:39,948 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-06-05 05:10:24] 2025-06-05 02:59:39,948 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-06-05 05:10:24] 2025-06-05 02:59:39,948 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-06-05 05:10:24] 2025-06-05 02:59:39,948 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-06-05 05:10:24] 2025-06-05 02:59:39,948 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-06-05 05:10:24] 2025-06-05 02:59:39,948 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-06-05 05:10:24] 2025-06-05 02:59:39,949 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-06-05 05:10:24] 2025-06-05 02:59:39,949 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-06-05 05:10:24] 2025-06-05 02:59:39,949 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-06-05 05:10:24] 2025-06-05 02:59:39,949 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-06-05 05:10:24] 2025-06-05 02:59:39,949 | INFO     | queue completed_jobids has 1 job(s)
[2025-06-05 05:10:24] 2025-06-05 02:59:39,949 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-06-05 05:10:24] 2025-06-05 02:59:39,949 | INFO     | queue messages had 0 job(s) [purged]
[2025-06-05 05:10:24] 2025-06-05 02:59:39,949 | INFO     | job 6679735697 has completed (purged errors)
[2025-06-05 05:10:24] 2025-06-05 02:59:39,949 | INFO     | overall cleanup function is called
[2025-06-05 05:10:24] 2025-06-05 02:59:40,958 | INFO     | --- collectZombieJob: --- 10, [17346]
[2025-06-05 05:10:24] 2025-06-05 02:59:40,959 | INFO     | zombie collector waiting for pid 17346
[2025-06-05 05:10:24] 2025-06-05 02:59:40,959 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-06-05 05:10:24] 2025-06-05 02:59:40,959 | INFO     | collected zombie processes
[2025-06-05 05:10:24] 2025-06-05 02:59:40,959 | INFO     | will attempt to kill all subprocesses of pid=17346
[2025-06-05 05:10:24] 2025-06-05 02:59:41,092 | INFO     | process IDs to be killed: [17346] (in reverse order)
[2025-06-05 05:10:24] 2025-06-05 02:59:41,353 | INFO     | PID=4391 has CPU usage=2.4% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i PR -
[2025-06-05 05:10:24] 2025-06-05 02:59:41,353 | INFO     | .. there are 9 such processes running
[2025-06-05 05:10:24] 2025-06-05 02:59:41,710 | WARNING  | found no corresponding commands to process id(s)
[2025-06-05 05:10:24] 2025-06-05 02:59:41,711 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-06-05 05:10:24] 2025-06-05 02:59:41,714 | INFO     | did not find any defunct processes belonging to 17346
[2025-06-05 05:10:24] 2025-06-05 02:59:41,726 | INFO     | did not find any defunct processes belonging to 17346
[2025-06-05 05:10:24] 2025-06-05 02:59:41,727 | INFO     | ready for new job
[2025-06-05 05:10:24] 2025-06-05 02:59:41,727 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-06-05 05:10:24] 2025-06-05 02:59:41,729 | INFO     | **************************************
[2025-06-05 05:10:24] 2025-06-05 02:59:41,729 | INFO     | ***  PanDA Pilot version 3.10.2.2  ***
[2025-06-05 05:10:24] 2025-06-05 02:59:41,729 | INFO     | **************************************
[2025-06-05 05:10:24] 2025-06-05 02:59:41,729 | INFO     | 
[2025-06-05 05:10:24] 2025-06-05 02:59:41,730 | INFO     | pilot is running in a VM
[2025-06-05 05:10:24] 2025-06-05 02:59:41,730 | INFO     | architecture information:
[2025-06-05 05:10:24] 2025-06-05 02:59:41,748 | INFO     | executing command: cat /etc/os-release
[2025-06-05 05:10:24] 2025-06-05 02:59:41,965 | INFO     | cat /etc/os-release:
[2025-06-05 05:10:24] NAME="CentOS Linux"
[2025-06-05 05:10:24] VERSION="7 (Core)"
[2025-06-05 05:10:24] ID="centos"
[2025-06-05 05:10:24] ID_LIKE="rhel fedora"
[2025-06-05 05:10:24] VERSION_ID="7"
[2025-06-05 05:10:24] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-06-05 05:10:24] ANSI_COLOR="0;31"
[2025-06-05 05:10:24] CPE_NAME="cpe:/o:centos:centos:7"
[2025-06-05 05:10:24] HOME_URL="https://www.centos.org/"
[2025-06-05 05:10:24] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-06-05 05:10:24] 
[2025-06-05 05:10:24] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-06-05 05:10:24] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-06-05 05:10:24] REDHAT_SUPPORT_PRODUCT="centos"
[2025-06-05 05:10:24] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-06-05 05:10:24] 
[2025-06-05 05:10:24] 2025-06-05 02:59:41,965 | INFO     | **************************************
[2025-06-05 05:10:24] 2025-06-05 02:59:42,469 | INFO     | executing command: df -mP /var/lib/boinc/slots/13
[2025-06-05 05:10:24] 2025-06-05 02:59:42,710 | INFO     | sufficient remaining disk space (497397268480 B)
[2025-06-05 05:10:24] 2025-06-05 02:59:42,711 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-06-05 05:10:24] 2025-06-05 02:59:42,711 | INFO     | current server update state: UPDATING_FINAL
[2025-06-05 05:10:24] 2025-06-05 02:59:42,711 | INFO     | update_server=False
[2025-06-05 05:10:24] 2025-06-05 02:59:42,711 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-06-05 05:10:24] 2025-06-05 02:59:42,716 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-06-05 05:10:24] 2025-06-05 02:59:42,717 | INFO     | aborting loop
[2025-06-05 05:10:24] 2025-06-05 02:59:43,070 | INFO     | all data control threads have been joined
[2025-06-05 05:10:24] 2025-06-05 02:59:43,133 | INFO     | all job control threads have been joined
[2025-06-05 05:10:24] 2025-06-05 02:59:43,360 | INFO     | found 0 job(s) in 20 queues
[2025-06-05 05:10:24] 2025-06-05 02:59:43,361 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-06-05 05:10:24] 2025-06-05 02:59:43,361 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-06-05 05:10:24] 2025-06-05 02:59:43,583 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-06-05 05:10:24] 2025-06-05 02:59:43,717 | INFO     | [job] retrieve thread has finished
[2025-06-05 05:10:24] 2025-06-05 02:59:43,722 | INFO     | [job] job monitor thread has finished
[2025-06-05 05:10:24] 2025-06-05 02:59:43,796 | INFO     | [payload] failed_post thread has finished
[2025-06-05 05:10:24] 2025-06-05 02:59:43,816 | INFO     | [payload] validate_pre thread has finished
[2025-06-05 05:10:24] 2025-06-05 02:59:43,948 | INFO     | all payload control threads have been joined
[2025-06-05 05:10:24] 2025-06-05 02:59:44,076 | INFO     | [data] control thread has finished
[2025-06-05 05:10:24] 2025-06-05 02:59:44,138 | INFO     | [payload] run_realtimelog thread has finished
[2025-06-05 05:10:24] 2025-06-05 02:59:44,139 | INFO     | [job] control thread has finished
[2025-06-05 05:10:24] 2025-06-05 02:59:44,211 | INFO     | [data] copytool_in thread has finished
[2025-06-05 05:10:24] 2025-06-05 02:59:44,237 | INFO     | [payload] validate_post thread has finished
[2025-06-05 05:10:24] 2025-06-05 02:59:44,257 | INFO     | [payload] execute_payloads thread has finished
[2025-06-05 05:10:24] 2025-06-05 02:59:44,438 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-06-05 05:10:24] 2025-06-05 02:59:44,701 | INFO     | [job] validate thread has finished
[2025-06-05 05:10:24] 2025-06-05 02:59:44,814 | INFO     | [job] create_data_payload thread has finished
[2025-06-05 05:10:24] 2025-06-05 02:59:44,954 | INFO     | [payload] control thread has finished
[2025-06-05 05:10:24] 2025-06-05 02:59:45,444 | INFO     | [job] queue monitor thread has finished
[2025-06-05 05:10:24] 2025-06-05 02:59:45,590 | INFO     | [data] copytool_out thread has finished
[2025-06-05 05:10:24] 2025-06-05 02:59:45,632 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-06-05 05:10:24] 2025-06-05 02:59:49,641 | INFO     | [data] queue_monitor thread has finished
[2025-06-05 05:10:24] 2025-06-05 02:59:51,423 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 139806858729280)>', '<ExcThread(monitor, started 139806151538432)>']
[2025-06-05 05:10:24] 2025-06-05 02:59:52,415 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-06-05 05:10:24] 2025-06-05 02:59:52,416 | INFO     | [monitor] control thread has ended
[2025-06-05 05:10:24] 2025-06-05 02:59:56,449 | INFO     | all workflow threads have been joined
[2025-06-05 05:10:24] 2025-06-05 02:59:56,450 | INFO     | end of generic workflow (traces error code: 0)
[2025-06-05 05:10:24] 2025-06-05 02:59:56,450 | INFO     | traces error code: 0
[2025-06-05 05:10:24] 2025-06-05 02:59:56,450 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-06-05 05:10:24] 2025-06-05 02:59:56,866 [wrapper] ==== pilot stdout END ====
[2025-06-05 05:10:24] 2025-06-05 02:59:56,959 [wrapper] ==== wrapper stdout RESUME ====
[2025-06-05 05:10:24] 2025-06-05 02:59:57,059 [wrapper] pilotpid: 4391
[2025-06-05 05:10:24] 2025-06-05 02:59:57,118 [wrapper] Pilot exit status: 0
[2025-06-05 05:10:24] 2025-06-05 02:59:57,448 [wrapper] pandaids: 6679735697
[2025-06-05 05:10:24] 2025-06-05 02:59:58,278 [wrapper] cleanup supervisor_pilot 25598 4392
[2025-06-05 05:10:24] 2025-06-05 02:59:58,400 [wrapper] Test setup, not cleaning
[2025-06-05 05:10:24] 2025-06-05 02:59:58,486 [wrapper] apfmon messages muted
[2025-06-05 05:10:24] 2025-06-05 02:59:58,557 [wrapper] ==== wrapper stdout END ====
[2025-06-05 05:10:24] 2025-06-05 02:59:58,628 [wrapper] ==== wrapper stderr END ====
[2025-06-05 05:10:24]  *** Error codes and diagnostics ***
[2025-06-05 05:10:25]     "exeErrorCode": 0,
[2025-06-05 05:10:25]     "exeErrorDiag": "",
[2025-06-05 05:10:25]     "pilotErrorCode": 0,
[2025-06-05 05:10:25]     "pilotErrorDiag": "",
[2025-06-05 05:10:25]  *** Listing of results directory ***
[2025-06-05 05:10:25] total 391028
[2025-06-05 05:10:25] -rw-r--r--. 1 boinc boinc    495897 Jun  4 15:10 pilot3.tar.gz
[2025-06-05 05:10:25] -rwx------. 1 boinc boinc     37140 Jun  4 15:33 runpilot2-wrapper.sh
[2025-06-05 05:10:25] -rw-r--r--. 1 boinc boinc      5111 Jun  4 15:33 queuedata.json
[2025-06-05 05:10:25] -rw-r--r--. 1 boinc boinc       100 Jun  5 00:33 wrapper_26015_x86_64-pc-linux-gnu
[2025-06-05 05:10:25] -rwxr-xr-x. 1 boinc boinc      7986 Jun  5 00:33 run_atlas
[2025-06-05 05:10:25] -rw-r--r--. 1 boinc boinc       105 Jun  5 00:33 job.xml
[2025-06-05 05:10:25] -rw-r--r--. 1 boinc boinc      6393 Jun  5 00:33 init_data.xml
[2025-06-05 05:10:25] -rw-r--r--. 2 boinc boinc 217350049 Jun  5 00:33 EVNT.45006593._001925.pool.root.1
[2025-06-05 05:10:25] -rw-r--r--. 2 boinc boinc     15093 Jun  5 00:33 start_atlas.sh
[2025-06-05 05:10:25] drwxrwx--x. 2 boinc boinc        68 Jun  5 00:33 shared
[2025-06-05 05:10:25] -rw-r--r--. 2 boinc boinc    508880 Jun  5 00:33 input.tar.gz
[2025-06-05 05:10:25] -rw-r--r--. 1 boinc boinc         0 Jun  5 00:33 boinc_lockfile
[2025-06-05 05:10:25] -rw-r--r--. 1 boinc boinc      2524 Jun  5 01:04 pandaJob.out
[2025-06-05 05:10:25] -rw-------. 1 boinc boinc    987032 Jun  5 01:07 agis_schedconf.cvmfs.json
[2025-06-05 05:10:25] drwx------. 4 boinc boinc      4096 Jun  5 01:07 pilot3
[2025-06-05 05:10:25] -rw-------. 1 boinc boinc 176127748 Jun  5 04:56 HITS.45006595._056668.pool.root.1
[2025-06-05 05:10:25] -rw-r--r--. 1 boinc boinc       531 Jun  5 04:56 boinc_task_state.xml
[2025-06-05 05:10:25] -rw-------. 1 boinc boinc      1014 Jun  5 04:57 memory_monitor_summary.json
[2025-06-05 05:10:25] -rw-------. 1 boinc boinc   1598969 Jun  5 04:57 agis_ddmendpoints.agis.ALL.json
[2025-06-05 05:10:25] -rw-------. 1 boinc boinc    375636 Jun  5 04:58 log.45006595._056668.job.log.tgz.1
[2025-06-05 05:10:25] -rw-------. 1 boinc boinc        95 Jun  5 04:58 pilot_heartbeat.json
[2025-06-05 05:10:25] -rw-------. 1 boinc boinc      7695 Jun  5 04:59 heartbeat.json
[2025-06-05 05:10:25] -rw-------. 1 boinc boinc      4417 Jun  5 04:59 pilotlog.txt
[2025-06-05 05:10:25] -rw-------. 1 boinc boinc   1184199 Jun  5 04:59 log.45006595._056668.job.log.1
[2025-06-05 05:10:25] -rw-------. 1 boinc boinc       357 Jun  5 05:00 output.list
[2025-06-05 05:10:25] -rw-r--r--. 1 boinc boinc       620 Jun  5 05:00 runtime_log
[2025-06-05 05:10:25] -rw-------. 1 boinc boinc   1576960 Jun  5 05:00 result.tar.gz
[2025-06-05 05:10:25] -rw-------. 1 boinc boinc       657 Jun  5 05:00 WqSLDm1P3g7nsSi4ap6QjLDmwznN0nGgGQJmUXzaDmMznKDmmmGLEn.diag
[2025-06-05 05:10:25] -rw-r--r--. 1 boinc boinc      8673 Jun  5 05:00 runtime_log.err
[2025-06-05 05:10:25] -rw-r--r--. 1 boinc boinc      8192 Jun  5 05:10 boinc_mmap_file
[2025-06-05 05:10:25] -rw-r--r--. 1 boinc boinc        28 Jun  5 05:10 wrapper_checkpoint.txt
[2025-06-05 05:10:25] -rw-r--r--. 1 boinc boinc     20583 Jun  5 05:10 stderr.txt
[2025-06-05 05:10:25] HITS file was successfully produced:
[2025-06-05 05:10:25] -rw-------. 1 boinc boinc 176127748 Jun  5 04:56 shared/HITS.pool.root.1
[2025-06-05 05:10:25]  *** Contents of shared directory: ***
[2025-06-05 05:10:25] total 386312
[2025-06-05 05:10:25] -rw-r--r--. 2 boinc boinc 217350049 Jun  5 00:33 ATLAS.root_0
[2025-06-05 05:10:25] -rw-r--r--. 2 boinc boinc     15093 Jun  5 00:33 start_atlas.sh
[2025-06-05 05:10:25] -rw-r--r--. 2 boinc boinc    508880 Jun  5 00:33 input.tar.gz
[2025-06-05 05:10:25] -rw-------. 1 boinc boinc 176127748 Jun  5 04:56 HITS.pool.root.1
[2025-06-05 05:10:25] -rw-------. 1 boinc boinc   1576960 Jun  5 05:00 result.tar.gz
05:10:26 (12267): run_atlas exited; CPU time 50901.580064
05:10:26 (12267): called boinc_finish(0)

</stderr_txt>
]]>

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