Stderr output

<core_client_version>8.1.0</core_client_version>
<![CDATA[
<stderr_txt>
10:12:35 (3795723): wrapper (7.7.26015): starting
10:12:35 (3795723): wrapper: running run_atlas (--nthreads 8)
[2025-06-04 10:12:35] Arguments: --nthreads 8
[2025-06-04 10:12:35] Threads: 8
[2025-06-04 10:12:35] Checking for CVMFS
[2025-06-04 10:12:35] Probing /cvmfs/atlas.cern.ch... OK
[2025-06-04 10:12:35] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-06-04 10:12:35] Running cvmfs_config stat atlas.cern.ch
[2025-06-04 10:12:35] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-06-04 10:12:35] 2.12.6.0 863165 32903 496328 146781 3 633 25314519 40960001 23538 16776704 1 152053516 99.683 135378609 27642 http://cvmfs-s1fnal.opensciencegrid.org:8000/cvmfs/atlas.cern.ch http://192.41.231.237:6081 1
[2025-06-04 10:12:35] CVMFS is ok
[2025-06-04 10:12:35] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-06-04 10:12:35] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2025-06-04 10:12:35] Further information can be found at the LHC@home message board.
[2025-06-04 10:12:35] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-06-04 10:12:35] Checking for apptainer binary...
[2025-06-04 10:12:35] Using apptainer found in PATH at /usr/bin/apptainer
[2025-06-04 10:12:35] Running /usr/bin/apptainer --version
[2025-06-04 10:12:35] apptainer version 1.4.1-1.el9
[2025-06-04 10:12:35] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-06-04 10:12:36] c7-11-14.aglt2.org
[2025-06-04 10:12:36] apptainer works
[2025-06-04 10:12:36] Set ATHENA_PROC_NUMBER=8
[2025-06-04 10:12:36] Set ATHENA_CORE_NUMBER=8
[2025-06-04 10:12:36] Starting ATLAS job with PandaID=6666907218
[2025-06-04 10:12:36] Running command: /usr/bin/apptainer exec -B /cvmfs,/tmp/boinchome/slots/0 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-06-04 12:02:12]  *** The last 200 lines of the pilot log: ***
[2025-06-04 12:02:12] 2025-06-04 16:01:59,391 | INFO     | using path: /tmp/boinchome/slots/0/PanDA_Pilot-6666907218/memory_monitor_summary.json (trf name=prmon)
[2025-06-04 12:02:12] 2025-06-04 16:01:59,392 | INFO     | extracted standard info from prmon json
[2025-06-04 12:02:12] 2025-06-04 16:01:59,392 | INFO     | extracted standard memory fields from prmon json
[2025-06-04 12:02:12] 2025-06-04 16:01:59,392 | WARNING  | GPU info not found in prmon json: 'gpu'
[2025-06-04 12:02:12] 2025-06-04 16:01:59,393 | WARNING  | format EVNTtoHITS has no such key: dbData
[2025-06-04 12:02:12] 2025-06-04 16:01:59,393 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2025-06-04 12:02:12] 2025-06-04 16:01:59,395 | INFO     | fitting pss+swap vs Time
[2025-06-04 12:02:12] 2025-06-04 16:01:59,395 | INFO     | sum of square deviations: 379832238.0
[2025-06-04 12:02:12] 2025-06-04 16:01:59,395 | INFO     | sum of deviations: 29871947660.0
[2025-06-04 12:02:12] 2025-06-04 16:01:59,395 | INFO     | mean x: 1749049626.0
[2025-06-04 12:02:12] 2025-06-04 16:01:59,396 | INFO     | mean y: 2107692.5887850467
[2025-06-04 12:02:12] 2025-06-04 16:01:59,396 | INFO     | -- intersect: -137552090333.68454
[2025-06-04 12:02:12] 2025-06-04 16:01:59,396 | INFO     | intersect: -137552090333.68454
[2025-06-04 12:02:12] 2025-06-04 16:01:59,396 | INFO     | chi2: 2.9969578103710406
[2025-06-04 12:02:12] 2025-06-04 16:01:59,396 | INFO     | sum of square deviations: 329031285.5
[2025-06-04 12:02:12] 2025-06-04 16:01:59,397 | INFO     | sum of deviations: 28841281839.0
[2025-06-04 12:02:12] 2025-06-04 16:01:59,397 | INFO     | mean x: 1749049473.5
[2025-06-04 12:02:12] 2025-06-04 16:01:59,397 | INFO     | mean y: 2104543.294117647
[2025-06-04 12:02:12] 2025-06-04 16:01:59,397 | INFO     | -- intersect: -153311063652.58572
[2025-06-04 12:02:12] 2025-06-04 16:01:59,397 | INFO     | intersect: -153311063652.58572
[2025-06-04 12:02:12] 2025-06-04 16:01:59,397 | INFO     | chi2: 2.98775995261899
[2025-06-04 12:02:12] 2025-06-04 16:01:59,397 | INFO     | current chi2=2.98775995261899 (change=0.306906480972846 %)
[2025-06-04 12:02:12] 2025-06-04 16:01:59,397 | INFO     | right removable region: 101
[2025-06-04 12:02:12] 2025-06-04 16:01:59,397 | INFO     | sum of square deviations: 329031285.5
[2025-06-04 12:02:12] 2025-06-04 16:01:59,398 | INFO     | sum of deviations: 8629840983.000002
[2025-06-04 12:02:12] 2025-06-04 16:01:59,398 | INFO     | mean x: 1749049778.5
[2025-06-04 12:02:12] 2025-06-04 16:01:59,398 | INFO     | mean y: 2171080.725490196
[2025-06-04 12:02:12] 2025-06-04 16:01:59,398 | INFO     | -- intersect: -45871951305.14221
[2025-06-04 12:02:12] 2025-06-04 16:01:59,398 | INFO     | intersect: -45871951305.14221
[2025-06-04 12:02:12] 2025-06-04 16:01:59,398 | INFO     | chi2: 0.742070328511036
[2025-06-04 12:02:12] 2025-06-04 16:01:59,398 | INFO     | current chi2=0.742070328511036 (change=75.23921338021226 %)
[2025-06-04 12:02:12] 2025-06-04 16:01:59,398 | INFO     | sum of square deviations: 282974608.0
[2025-06-04 12:02:12] 2025-06-04 16:01:59,399 | INFO     | sum of deviations: -2638434341.9999995
[2025-06-04 12:02:12] 2025-06-04 16:01:59,399 | INFO     | mean x: 1749049931.0
[2025-06-04 12:02:12] 2025-06-04 16:01:59,399 | INFO     | mean y: 2208034.81443299
[2025-06-04 12:02:12] 2025-06-04 16:01:59,399 | INFO     | -- intersect: 16310220391.25572
[2025-06-04 12:02:12] 2025-06-04 16:01:59,399 | INFO     | intersect: 16310220391.25572
[2025-06-04 12:02:12] 2025-06-04 16:01:59,399 | INFO     | chi2: 0.07737844606487701
[2025-06-04 12:02:12] 2025-06-04 16:01:59,399 | INFO     | current chi2=0.07737844606487701 (change=89.57262632773138 %)
[2025-06-04 12:02:12] 2025-06-04 16:01:59,400 | INFO     | sum of square deviations: 241429643.0
[2025-06-04 12:02:12] 2025-06-04 16:01:59,400 | INFO     | sum of deviations: -1778791140.4999995
[2025-06-04 12:02:12] 2025-06-04 16:01:59,400 | INFO     | mean x: 1749050083.5
[2025-06-04 12:02:12] 2025-06-04 16:01:59,400 | INFO     | mean y: 2204743.836956522
[2025-06-04 12:02:12] 2025-06-04 16:01:59,400 | INFO     | -- intersect: 12888753198.123426
[2025-06-04 12:02:12] 2025-06-04 16:01:59,400 | INFO     | intersect: 12888753198.123426
[2025-06-04 12:02:12] 2025-06-04 16:01:59,400 | INFO     | chi2: 0.06597969942204111
[2025-06-04 12:02:12] 2025-06-04 16:01:59,400 | INFO     | current chi2=0.06597969942204111 (change=14.73116510155652 %)
[2025-06-04 12:02:12] 2025-06-04 16:01:59,400 | INFO     | left removable region: 30
[2025-06-04 12:02:12] 2025-06-04 16:01:59,401 | INFO     | sum of square deviations: 110960220.0
[2025-06-04 12:02:12] 2025-06-04 16:01:59,401 | INFO     | sum of deviations: 1644338021.0
[2025-06-04 12:02:12] 2025-06-04 16:01:59,401 | INFO     | mean x: 1749050358.0
[2025-06-04 12:02:12] 2025-06-04 16:01:59,401 | INFO     | mean y: 2192077.732394366
[2025-06-04 12:02:12] 2025-06-04 16:01:59,401 | INFO     | -- intersect: -25917277118.553097
[2025-06-04 12:02:12] 2025-06-04 16:01:59,401 | INFO     | intersect: -25917277118.553097
[2025-06-04 12:02:12] 2025-06-04 16:01:59,401 | INFO     | chi2: 0.010897257011988584
[2025-06-04 12:02:12] 2025-06-04 16:01:59,401 | INFO     | -- intersect: -25917277118.553097
[2025-06-04 12:02:12] 2025-06-04 16:01:59,401 | INFO     | current memory leak: 14.82 B/s (using 71 data points, chi2=0.01)
[2025-06-04 12:02:12] 2025-06-04 16:01:59,402 | INFO     | ..............................
[2025-06-04 12:02:12] 2025-06-04 16:01:59,402 | INFO     | . Timing measurements:
[2025-06-04 12:02:12] 2025-06-04 16:01:59,402 | INFO     | . get job = 0 s
[2025-06-04 12:02:12] 2025-06-04 16:01:59,402 | INFO     | . initial setup = 2 s
[2025-06-04 12:02:12] 2025-06-04 16:01:59,402 | INFO     | . payload setup = 6 s
[2025-06-04 12:02:12] 2025-06-04 16:01:59,402 | INFO     | . stage-in = 0 s
[2025-06-04 12:02:12] 2025-06-04 16:01:59,402 | INFO     | . payload execution = 6519 s
[2025-06-04 12:02:12] 2025-06-04 16:01:59,402 | INFO     | . stage-out = 0 s
[2025-06-04 12:02:12] 2025-06-04 16:01:59,402 | INFO     | . log creation = 0 s
[2025-06-04 12:02:12] 2025-06-04 16:01:59,402 | INFO     | ..............................
[2025-06-04 12:02:12] 2025-06-04 16:01:59,477 | INFO     | 
[2025-06-04 12:02:12] 2025-06-04 16:01:59,477 | INFO     | job summary report
[2025-06-04 12:02:12] 2025-06-04 16:01:59,477 | INFO     | --------------------------------------------------
[2025-06-04 12:02:12] 2025-06-04 16:01:59,477 | INFO     | PanDA job id: 6666907218
[2025-06-04 12:02:12] 2025-06-04 16:01:59,477 | INFO     | task id: 44871837
[2025-06-04 12:02:12] 2025-06-04 16:01:59,477 | INFO     | errors: (none)
[2025-06-04 12:02:12] 2025-06-04 16:01:59,477 | INFO     | status: LOG_TRANSFER = DONE 
[2025-06-04 12:02:12] 2025-06-04 16:01:59,477 | INFO     | pilot state: finished 
[2025-06-04 12:02:12] 2025-06-04 16:01:59,477 | INFO     | transexitcode: 0
[2025-06-04 12:02:12] 2025-06-04 16:01:59,477 | INFO     | exeerrorcode: 0
[2025-06-04 12:02:12] 2025-06-04 16:01:59,478 | INFO     | exeerrordiag: 
[2025-06-04 12:02:12] 2025-06-04 16:01:59,478 | INFO     | exitcode: 0
[2025-06-04 12:02:12] 2025-06-04 16:01:59,478 | INFO     | exitmsg: OK
[2025-06-04 12:02:12] 2025-06-04 16:01:59,478 | INFO     | cpuconsumptiontime: 41434 s
[2025-06-04 12:02:12] 2025-06-04 16:01:59,478 | INFO     | nevents: 400
[2025-06-04 12:02:12] 2025-06-04 16:01:59,478 | INFO     | neventsw: 0
[2025-06-04 12:02:12] 2025-06-04 16:01:59,478 | INFO     | pid: 3812103
[2025-06-04 12:02:12] 2025-06-04 16:01:59,478 | INFO     | pgrp: 3812103
[2025-06-04 12:02:12] 2025-06-04 16:01:59,478 | INFO     | corecount: 8
[2025-06-04 12:02:12] 2025-06-04 16:01:59,478 | INFO     | event service: False
[2025-06-04 12:02:12] 2025-06-04 16:01:59,478 | INFO     | sizes: {0: 2396564, 1: 2397420, 5: 2397626, 12: 2397682, 6528: 2424817, 6529: 2424816, 6531: 2433997, 6537: 2434111}
[2025-06-04 12:02:12] 2025-06-04 16:01:59,478 | INFO     | --------------------------------------------------
[2025-06-04 12:02:12] 2025-06-04 16:01:59,478 | INFO     | 
[2025-06-04 12:02:12] 2025-06-04 16:01:59,478 | INFO     | executing command: ls -lF /tmp/boinchome/slots/0
[2025-06-04 12:02:12] 2025-06-04 16:01:59,499 | INFO     | queue jobs had 0 job(s) [purged]
[2025-06-04 12:02:12] 2025-06-04 16:01:59,499 | INFO     | queue payloads had 0 job(s) [purged]
[2025-06-04 12:02:12] 2025-06-04 16:01:59,499 | INFO     | queue data_in had 0 job(s) [purged]
[2025-06-04 12:02:12] 2025-06-04 16:01:59,499 | INFO     | queue data_out had 0 job(s) [purged]
[2025-06-04 12:02:12] 2025-06-04 16:01:59,499 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-06-04 12:02:12] 2025-06-04 16:01:59,499 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-06-04 12:02:12] 2025-06-04 16:01:59,499 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-06-04 12:02:12] 2025-06-04 16:01:59,499 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-06-04 12:02:12] 2025-06-04 16:01:59,500 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-06-04 12:02:12] 2025-06-04 16:01:59,500 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-06-04 12:02:12] 2025-06-04 16:01:59,500 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-06-04 12:02:12] 2025-06-04 16:01:59,500 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-06-04 12:02:12] 2025-06-04 16:01:59,500 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-06-04 12:02:12] 2025-06-04 16:01:59,500 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-06-04 12:02:12] 2025-06-04 16:01:59,500 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-06-04 12:02:12] 2025-06-04 16:01:59,500 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-06-04 12:02:12] 2025-06-04 16:01:59,500 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-06-04 12:02:12] 2025-06-04 16:01:59,500 | INFO     | queue completed_jobids has 1 job(s)
[2025-06-04 12:02:12] 2025-06-04 16:01:59,500 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-06-04 12:02:12] 2025-06-04 16:01:59,500 | INFO     | queue messages had 0 job(s) [purged]
[2025-06-04 12:02:12] 2025-06-04 16:01:59,501 | INFO     | job 6666907218 has completed (purged errors)
[2025-06-04 12:02:12] 2025-06-04 16:01:59,501 | INFO     | overall cleanup function is called
[2025-06-04 12:02:12] 2025-06-04 16:02:00,510 | INFO     | --- collectZombieJob: --- 10, [3812103]
[2025-06-04 12:02:12] 2025-06-04 16:02:00,510 | INFO     | zombie collector waiting for pid 3812103
[2025-06-04 12:02:12] 2025-06-04 16:02:00,510 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-06-04 12:02:12] 2025-06-04 16:02:00,510 | INFO     | collected zombie processes
[2025-06-04 12:02:12] 2025-06-04 16:02:00,510 | INFO     | will attempt to kill all subprocesses of pid=3812103
[2025-06-04 12:02:12] 2025-06-04 16:02:00,911 | INFO     | process IDs to be killed: [3812103] (in reverse order)
[2025-06-04 12:02:12] 2025-06-04 16:02:01,031 | WARNING  | found no corresponding commands to process id(s)
[2025-06-04 12:02:12] 2025-06-04 16:02:01,032 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-06-04 12:02:12] 2025-06-04 16:02:01,049 | INFO     | did not find any defunct processes belonging to 3812103
[2025-06-04 12:02:12] 2025-06-04 16:02:01,066 | INFO     | did not find any defunct processes belonging to 3812103
[2025-06-04 12:02:12] 2025-06-04 16:02:01,066 | INFO     | ready for new job
[2025-06-04 12:02:12] 2025-06-04 16:02:01,066 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-06-04 12:02:12] 2025-06-04 16:02:01,068 | INFO     | **************************************
[2025-06-04 12:02:12] 2025-06-04 16:02:01,068 | INFO     | ***  PanDA Pilot version 3.10.2.2  ***
[2025-06-04 12:02:12] 2025-06-04 16:02:01,068 | INFO     | **************************************
[2025-06-04 12:02:12] 2025-06-04 16:02:01,068 | INFO     | 
[2025-06-04 12:02:12] 2025-06-04 16:02:01,083 | INFO     | architecture information:
[2025-06-04 12:02:12] 2025-06-04 16:02:01,083 | INFO     | executing command: cat /etc/os-release
[2025-06-04 12:02:12] 2025-06-04 16:02:01,104 | INFO     | cat /etc/os-release:
[2025-06-04 12:02:12] NAME="CentOS Linux"
[2025-06-04 12:02:12] VERSION="7 (Core)"
[2025-06-04 12:02:12] ID="centos"
[2025-06-04 12:02:12] ID_LIKE="rhel fedora"
[2025-06-04 12:02:12] VERSION_ID="7"
[2025-06-04 12:02:12] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-06-04 12:02:12] ANSI_COLOR="0;31"
[2025-06-04 12:02:12] CPE_NAME="cpe:/o:centos:centos:7"
[2025-06-04 12:02:12] HOME_URL="https://www.centos.org/"
[2025-06-04 12:02:12] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-06-04 12:02:12] 
[2025-06-04 12:02:12] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-06-04 12:02:12] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-06-04 12:02:12] REDHAT_SUPPORT_PRODUCT="centos"
[2025-06-04 12:02:12] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-06-04 12:02:12] 
[2025-06-04 12:02:12] 2025-06-04 16:02:01,104 | INFO     | **************************************
[2025-06-04 12:02:12] 2025-06-04 16:02:01,607 | INFO     | executing command: df -mP /tmp/boinchome/slots/0
[2025-06-04 12:02:12] 2025-06-04 16:02:01,622 | INFO     | sufficient remaining disk space (85867888640 B)
[2025-06-04 12:02:12] 2025-06-04 16:02:01,623 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-06-04 12:02:12] 2025-06-04 16:02:01,623 | INFO     | current server update state: UPDATING_FINAL
[2025-06-04 12:02:12] 2025-06-04 16:02:01,623 | INFO     | update_server=False
[2025-06-04 12:02:12] 2025-06-04 16:02:01,623 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-06-04 12:02:12] 2025-06-04 16:02:01,623 | WARNING  | aborting monitor loop since graceful_stop has been set (timing out remaining threads)
[2025-06-04 12:02:12] 2025-06-04 16:02:01,623 | INFO     | found 0 job(s) in 20 queues
[2025-06-04 12:02:12] 2025-06-04 16:02:01,624 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-06-04 12:02:12] 2025-06-04 16:02:01,624 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-06-04 12:02:12] 2025-06-04 16:02:02,001 | INFO     | all data control threads have been joined
[2025-06-04 12:02:12] 2025-06-04 16:02:02,202 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-06-04 12:02:12] 2025-06-04 16:02:02,202 | INFO     | aborting loop
[2025-06-04 12:02:12] 2025-06-04 16:02:02,222 | INFO     | all payload control threads have been joined
[2025-06-04 12:02:12] 2025-06-04 16:02:02,222 | INFO     | all job control threads have been joined
[2025-06-04 12:02:12] 2025-06-04 16:02:02,628 | INFO     | [job] retrieve thread has finished
[2025-06-04 12:02:12] 2025-06-04 16:02:02,945 | INFO     | [payload] failed_post thread has finished
[2025-06-04 12:02:12] 2025-06-04 16:02:03,006 | INFO     | [data] control thread has finished
[2025-06-04 12:02:12] 2025-06-04 16:02:03,100 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-06-04 12:02:12] 2025-06-04 16:02:03,110 | INFO     | [payload] validate_pre thread has finished
[2025-06-04 12:02:12] 2025-06-04 16:02:03,143 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-06-04 12:02:12] 2025-06-04 16:02:03,208 | INFO     | [job] job monitor thread has finished
[2025-06-04 12:02:12] 2025-06-04 16:02:03,229 | INFO     | [job] control thread has finished
[2025-06-04 12:02:12] 2025-06-04 16:02:03,229 | INFO     | [payload] control thread has finished
[2025-06-04 12:02:12] 2025-06-04 16:02:03,244 | INFO     | [payload] validate_post thread has finished
[2025-06-04 12:02:12] 2025-06-04 16:02:03,517 | INFO     | [payload] execute_payloads thread has finished
[2025-06-04 12:02:12] 2025-06-04 16:02:03,682 | INFO     | [job] validate thread has finished
[2025-06-04 12:02:12] 2025-06-04 16:02:03,963 | INFO     | [payload] run_realtimelog thread has finished
[2025-06-04 12:02:12] 2025-06-04 16:02:03,976 | INFO     | [job] create_data_payload thread has finished
[2025-06-04 12:02:12] 2025-06-04 16:02:04,033 | INFO     | [data] copytool_in thread has finished
[2025-06-04 12:02:12] 2025-06-04 16:02:04,494 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-06-04 12:02:12] 2025-06-04 16:02:05,107 | INFO     | [data] copytool_out thread has finished
[2025-06-04 12:02:12] 2025-06-04 16:02:05,500 | INFO     | [job] queue monitor thread has finished
[2025-06-04 12:02:12] 2025-06-04 16:02:07,150 | INFO     | [data] queue_monitor thread has finished
[2025-06-04 12:02:12] 2025-06-04 16:02:07,189 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140262990280512)>', '<ExcThread(monitor, started 140262349203200)>']
[2025-06-04 12:02:12] 2025-06-04 16:02:07,660 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-06-04 12:02:12] 2025-06-04 16:02:07,660 | INFO     | [monitor] control thread has ended
[2025-06-04 12:02:12] 2025-06-04 16:02:12,214 | INFO     | all workflow threads have been joined
[2025-06-04 12:02:12] 2025-06-04 16:02:12,216 | INFO     | end of generic workflow (traces error code: 0)
[2025-06-04 12:02:12] 2025-06-04 16:02:12,216 | INFO     | traces error code: 0
[2025-06-04 12:02:12] 2025-06-04 16:02:12,216 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-06-04 12:02:12] 2025-06-04 16:02:12,349 [wrapper] ==== pilot stdout END ====
[2025-06-04 12:02:12] 2025-06-04 16:02:12,354 [wrapper] ==== wrapper stdout RESUME ====
[2025-06-04 12:02:12] 2025-06-04 16:02:12,358 [wrapper] pilotpid: 3799378
[2025-06-04 12:02:12] 2025-06-04 16:02:12,360 [wrapper] Pilot exit status: 0
[2025-06-04 12:02:12] 2025-06-04 16:02:12,378 [wrapper] pandaids: 6666907218
[2025-06-04 12:02:12] 2025-06-04 16:02:12,478 [wrapper] cleanup supervisor_pilot  535593 3799379
[2025-06-04 12:02:12] 2025-06-04 16:02:12,481 [wrapper] Test setup, not cleaning
[2025-06-04 12:02:12] 2025-06-04 16:02:12,484 [wrapper] apfmon messages muted
[2025-06-04 12:02:12] 2025-06-04 16:02:12,488 [wrapper] ==== wrapper stdout END ====
[2025-06-04 12:02:12] 2025-06-04 16:02:12,491 [wrapper] ==== wrapper stderr END ====
[2025-06-04 12:02:12]  *** Error codes and diagnostics ***
[2025-06-04 12:02:12]     "exeErrorCode": 0,
[2025-06-04 12:02:12]     "exeErrorDiag": "",
[2025-06-04 12:02:12]     "pilotErrorCode": 0,
[2025-06-04 12:02:12]     "pilotErrorDiag": "",
[2025-06-04 12:02:12]  *** Listing of results directory ***
[2025-06-04 12:02:12] total 415172
[2025-06-04 12:02:12] -rw-r--r--. 1 boincer umatlas    495897 May 27 06:25 pilot3.tar.gz
[2025-06-04 12:02:12] -rwx------. 1 boincer umatlas     37140 May 27 06:38 runpilot2-wrapper.sh
[2025-06-04 12:02:12] -rw-r--r--. 1 boincer umatlas      5111 May 27 06:38 queuedata.json
[2025-06-04 12:02:12] -rw-r--r--. 1 boincer umatlas       100 Jun  4 10:12 wrapper_26015_x86_64-pc-linux-gnu
[2025-06-04 12:02:12] -rwxr-xr-x. 1 boincer umatlas      7986 Jun  4 10:12 run_atlas
[2025-06-04 12:02:12] -rw-r--r--. 1 boincer umatlas       105 Jun  4 10:12 job.xml
[2025-06-04 12:02:12] -rw-r--r--. 2 boincer umatlas 225962845 Jun  4 10:12 EVNT.44871834._002600.pool.root.1
[2025-06-04 12:02:12] -rw-r--r--. 2 boincer umatlas     15093 Jun  4 10:12 start_atlas.sh
[2025-06-04 12:02:12] drwxrwx--x. 2 boincer umatlas      4096 Jun  4 10:12 shared
[2025-06-04 12:02:12] -rw-r--r--. 2 boincer umatlas    508872 Jun  4 10:12 input.tar.gz
[2025-06-04 12:02:12] -rw-r--r--. 1 boincer umatlas         0 Jun  4 10:12 boinc_lockfile
[2025-06-04 12:02:12] -rw-r--r--. 1 boincer umatlas      2559 Jun  4 10:12 pandaJob.out
[2025-06-04 12:02:12] -rw-------. 1 boincer umatlas    986819 Jun  4 10:12 agis_schedconf.cvmfs.json
[2025-06-04 12:02:12] -rw-------. 1 boincer umatlas   1598969 Jun  4 10:12 agis_ddmendpoints.agis.ALL.json
[2025-06-04 12:02:12] drwx------. 4 boincer umatlas      4096 Jun  4 10:12 pilot3
[2025-06-04 12:02:12] -rw-------. 1 boincer umatlas 193470580 Jun  4 12:01 HITS.44871837._066013.pool.root.1
[2025-06-04 12:02:12] -rw-r--r--. 1 boincer umatlas       529 Jun  4 12:01 boinc_task_state.xml
[2025-06-04 12:02:12] -rw-------. 1 boincer umatlas        95 Jun  4 12:01 pilot_heartbeat.json
[2025-06-04 12:02:12] -rw-r--r--. 1 boincer umatlas      6896 Jun  4 12:01 init_data.xml
[2025-06-04 12:02:12] -rw-------. 1 boincer umatlas      1033 Jun  4 12:01 memory_monitor_summary.json
[2025-06-04 12:02:12] -rw-------. 1 boincer umatlas    316468 Jun  4 12:01 log.44871837._066013.job.log.tgz.1
[2025-06-04 12:02:12] -rw-------. 1 boincer umatlas      7690 Jun  4 12:01 heartbeat.json
[2025-06-04 12:02:12] -rw-r--r--. 1 boincer umatlas      8192 Jun  4 12:02 boinc_mmap_file
[2025-06-04 12:02:12] -rw-r--r--. 1 boincer umatlas        27 Jun  4 12:02 wrapper_checkpoint.txt
[2025-06-04 12:02:12] -rw-------. 1 boincer umatlas      4476 Jun  4 12:02 pilotlog.txt
[2025-06-04 12:02:12] -rw-------. 1 boincer umatlas    616537 Jun  4 12:02 log.44871837._066013.job.log.1
[2025-06-04 12:02:12] -rw-------. 1 boincer umatlas       357 Jun  4 12:02 output.list
[2025-06-04 12:02:12] -rw-r--r--. 1 boincer umatlas       620 Jun  4 12:02 runtime_log
[2025-06-04 12:02:12] -rw-------. 1 boincer umatlas    952320 Jun  4 12:02 result.tar.gz
[2025-06-04 12:02:12] -rw-------. 1 boincer umatlas       653 Jun  4 12:02 yEQLDmjs6d7nsSi4ap6QjLDmwznN0nGgGQJmUXzaDmhAZKDmhkwctn.diag
[2025-06-04 12:02:12] -rw-r--r--. 1 boincer umatlas      8659 Jun  4 12:02 runtime_log.err
[2025-06-04 12:02:12] -rw-r--r--. 1 boincer umatlas     20862 Jun  4 12:02 stderr.txt
[2025-06-04 12:02:12] HITS file was successfully produced:
[2025-06-04 12:02:12] -rw-------. 1 boincer umatlas 193470580 Jun  4 12:01 shared/HITS.pool.root.1
[2025-06-04 12:02:12]  *** Contents of shared directory: ***
[2025-06-04 12:02:12] total 411064
[2025-06-04 12:02:12] -rw-r--r--. 2 boincer umatlas 225962845 Jun  4 10:12 ATLAS.root_0
[2025-06-04 12:02:12] -rw-r--r--. 2 boincer umatlas     15093 Jun  4 10:12 start_atlas.sh
[2025-06-04 12:02:12] -rw-r--r--. 2 boincer umatlas    508872 Jun  4 10:12 input.tar.gz
[2025-06-04 12:02:12] -rw-------. 1 boincer umatlas 193470580 Jun  4 12:01 HITS.pool.root.1
[2025-06-04 12:02:12] -rw-------. 1 boincer umatlas    952320 Jun  4 12:02 result.tar.gz
12:02:13 (3795723): run_atlas exited; CPU time 41552.238193
12:02:13 (3795723): called boinc_finish(0)

</stderr_txt>
]]>

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