Stderr output

<core_client_version>8.1.0</core_client_version>
<![CDATA[
<stderr_txt>
10:19:29 (2806713): wrapper (7.7.26015): starting
10:19:29 (2806713): wrapper: running run_atlas (--nthreads 8)
[2025-06-04 10:19:29] Arguments: --nthreads 8
[2025-06-04 10:19:29] Threads: 8
[2025-06-04 10:19:29] Checking for CVMFS
[2025-06-04 10:19:29] Probing /cvmfs/atlas.cern.ch... OK
[2025-06-04 10:19:30] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-06-04 10:19:30] Running cvmfs_config stat atlas.cern.ch
[2025-06-04 10:19:30] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-06-04 10:19:30] 2.12.6.0 2443832 23640 536004 146781 2 202 32412272 32935937 12756 16776704 0 140975983 99.645 125971215 26105 http://cvmfs-s1fnal.opensciencegrid.org:8000/cvmfs/atlas.cern.ch http://192.41.231.237:6081 1
[2025-06-04 10:19:30] CVMFS is ok
[2025-06-04 10:19:30] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-06-04 10:19:30] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2025-06-04 10:19:30] Further information can be found at the LHC@home message board.
[2025-06-04 10:19:30] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-06-04 10:19:30] Checking for apptainer binary...
[2025-06-04 10:19:30] Using apptainer found in PATH at /usr/bin/apptainer
[2025-06-04 10:19:30] Running /usr/bin/apptainer --version
[2025-06-04 10:19:30] apptainer version 1.4.1-1.el9
[2025-06-04 10:19:30] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-06-04 10:19:30] c6-12-29-1.aglt2.org
[2025-06-04 10:19:30] apptainer works
[2025-06-04 10:19:30] Set ATHENA_PROC_NUMBER=8
[2025-06-04 10:19:30] Set ATHENA_CORE_NUMBER=8
[2025-06-04 10:19:30] Starting ATLAS job with PandaID=6666906711
[2025-06-04 10:19:30] Running command: /usr/bin/apptainer exec -B /cvmfs,/tmp/boinchome/slots/0 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-06-04 11:35:05]  *** The last 200 lines of the pilot log: ***
[2025-06-04 11:35:05]  is_tar=False
[2025-06-04 11:35:05]  lfn=log.44871837._065984.job.log.tgz.1
[2025-06-04 11:35:05]  mtime=0
[2025-06-04 11:35:05]  protocol_id=None
[2025-06-04 11:35:05]  protocols=[{'endpoint': 'davs://dav.ndgf.org:443', 'flavour': 'WEBDAV', 'id': 331, 'path': '/atlas/disk/atlasdatadisk/rucio/'}]
[2025-06-04 11:35:05]  replicas=None
[2025-06-04 11:35:05]  scope=mc23_13p6TeV
[2025-06-04 11:35:05]  status=None
[2025-06-04 11:35:05]  status_code=0
[2025-06-04 11:35:05]  storage_token=
[2025-06-04 11:35:05]  surl=/tmp/boinchome/slots/0/PanDA_Pilot-6666906711/log.44871837._065984.job.log.tgz.1
[2025-06-04 11:35:05]  turl=davs://dav.ndgf.org:443/atlas/disk/atlasdatadisk/rucio/mc23_13p6TeV/62/4a/log.44871837._065984.job.log.tgz.1
[2025-06-04 11:35:05]  workdir=None
[2025-06-04 11:35:05] ]
[2025-06-04 11:35:05] 2025-06-04 15:34:38,492 | INFO     | transferring file log.44871837._065984.job.log.tgz.1 from /tmp/boinchome/slots/0/PanDA_Pilot-6666906711/log.44871837._065984.job.log.tgz.1 to /tmp/boinchome/slots/
[2025-06-04 11:35:05] 2025-06-04 15:34:38,492 | INFO     | executing command: /usr/bin/env mv /tmp/boinchome/slots/0/PanDA_Pilot-6666906711/log.44871837._065984.job.log.tgz.1 /tmp/boinchome/slots/0/log.44871837._065984.job
[2025-06-04 11:35:05] 2025-06-04 15:34:38,509 | INFO     | adding to output.list: log.44871837._065984.job.log.tgz.1 davs://dav.ndgf.org:443/atlas/disk/atlasdatadisk/rucio/mc23_13p6TeV/62/4a/log.44871837._065984.job.log.tg
[2025-06-04 11:35:05] 2025-06-04 15:34:38,510 | INFO     | alt stage-out settings: ['pl', 'write_lan', 'w', 'default'], allow_altstageout=False, remain_files=0, has_altstorage=True
[2025-06-04 11:35:05] 2025-06-04 15:34:38,510 | INFO     | summary of transferred files:
[2025-06-04 11:35:05] 2025-06-04 15:34:38,510 | INFO     |  -- lfn=log.44871837._065984.job.log.tgz.1, status_code=0, status=transferred
[2025-06-04 11:35:05] 2025-06-04 15:34:38,510 | INFO     | stage-out finished correctly
[2025-06-04 11:35:05] 2025-06-04 15:34:39,471 | WARNING  | process 2816905 can no longer be monitored (due to stat problems) - aborting
[2025-06-04 11:35:05] 2025-06-04 15:34:39,471 | INFO     | using path: /tmp/boinchome/slots/0/PanDA_Pilot-6666906711/memory_monitor_summary.json (trf name=prmon)
[2025-06-04 11:35:05] 2025-06-04 15:34:39,643 | INFO     | number of running child processes to parent process 2816905: 1
[2025-06-04 11:35:05] 2025-06-04 15:34:39,644 | INFO     | maximum number of monitored processes: 6
[2025-06-04 11:35:05] 2025-06-04 15:34:41,773 | INFO     | finished stage-out for finished payload, adding job to finished_jobs queue
[2025-06-04 11:35:05] 2025-06-04 15:34:41,827 | INFO     | job 6666906711 has state=finished
[2025-06-04 11:35:05] 2025-06-04 15:34:41,828 | INFO     | preparing for final server update for job 6666906711 in state='finished'
[2025-06-04 11:35:05] 2025-06-04 15:34:41,828 | INFO     | this job has now completed (state=finished)
[2025-06-04 11:35:05] 2025-06-04 15:34:41,828 | INFO     | pilot will not update the server (heartbeat message will be written to file)
[2025-06-04 11:35:05] 2025-06-04 15:34:41,829 | INFO     | log transfer has been attempted: DONE
[2025-06-04 11:35:05] 2025-06-04 15:34:41,829 | INFO     | job 6666906711 has finished - writing final server update
[2025-06-04 11:35:05] 2025-06-04 15:34:41,829 | INFO     | total number of processed events: 400 (read)
[2025-06-04 11:35:05] 2025-06-04 15:34:41,849 | INFO     | executing command: lscpu
[2025-06-04 11:35:05] 2025-06-04 15:34:41,917 | INFO     | executing command: export ATLAS_LOCAL_ROOT_BASE=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase;source ${ATLAS_LOCAL_ROOT_BASE}/user/atlasLocalSetup.sh --quiet;lsetup
[2025-06-04 11:35:05] 2025-06-04 15:34:42,146 | INFO     | monitor loop #335: job 0:6666906711 is in state 'finished'
[2025-06-04 11:35:05] 2025-06-04 15:34:42,147 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-06-04 11:35:05] 2025-06-04 15:34:44,649 | INFO     | monitor loop #336: job 0:6666906711 is in state 'finished'
[2025-06-04 11:35:05] 2025-06-04 15:34:44,650 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-06-04 11:35:05] 2025-06-04 15:34:46,229 | INFO     | CPU arch script returned: x86-64-v4
[2025-06-04 11:35:05] 2025-06-04 15:34:46,229 | INFO     | using path: /tmp/boinchome/slots/0/PanDA_Pilot-6666906711/memory_monitor_summary.json (trf name=prmon)
[2025-06-04 11:35:05] 2025-06-04 15:34:46,230 | INFO     | extracted standard info from prmon json
[2025-06-04 11:35:05] 2025-06-04 15:34:46,230 | INFO     | extracted standard memory fields from prmon json
[2025-06-04 11:35:05] 2025-06-04 15:34:46,230 | WARNING  | GPU info not found in prmon json: 'gpu'
[2025-06-04 11:35:05] 2025-06-04 15:34:46,231 | WARNING  | format EVNTtoHITS has no such key: dbData
[2025-06-04 11:35:05] 2025-06-04 15:34:46,231 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2025-06-04 11:35:05] 2025-06-04 15:34:46,232 | INFO     | fitting pss+swap vs Time
[2025-06-04 11:35:05] 2025-06-04 15:34:46,232 | INFO     | sum of square deviations: 93240818.0
[2025-06-04 11:35:05] 2025-06-04 15:34:46,233 | INFO     | sum of deviations: 9728851448.0
[2025-06-04 11:35:05] 2025-06-04 15:34:46,233 | INFO     | mean x: 1749049123.0
[2025-06-04 11:35:05] 2025-06-04 15:34:46,233 | INFO     | mean y: 2154752.5970149254
[2025-06-04 11:35:05] 2025-06-04 15:34:46,233 | INFO     | -- intersect: -182495590954.88574
[2025-06-04 11:35:05] 2025-06-04 15:34:46,233 | INFO     | intersect: -182495590954.88574
[2025-06-04 11:35:05] 2025-06-04 15:34:46,233 | INFO     | chi2: 0.8575874514101812
[2025-06-04 11:35:05] 2025-06-04 15:34:46,233 | INFO     | -- intersect: -182495590954.88574
[2025-06-04 11:35:05] 2025-06-04 15:34:46,233 | INFO     | current memory leak: 104.34 B/s (using 67 data points, chi2=0.86)
[2025-06-04 11:35:05] 2025-06-04 15:34:46,234 | INFO     | ..............................
[2025-06-04 11:35:05] 2025-06-04 15:34:46,234 | INFO     | . Timing measurements:
[2025-06-04 11:35:05] 2025-06-04 15:34:46,234 | INFO     | . get job = 0 s
[2025-06-04 11:35:05] 2025-06-04 15:34:46,234 | INFO     | . initial setup = 2 s
[2025-06-04 11:35:05] 2025-06-04 15:34:46,234 | INFO     | . payload setup = 5 s
[2025-06-04 11:35:05] 2025-06-04 15:34:46,234 | INFO     | . stage-in = 0 s
[2025-06-04 11:35:05] 2025-06-04 15:34:46,234 | INFO     | . payload execution = 4472 s
[2025-06-04 11:35:05] 2025-06-04 15:34:46,234 | INFO     | . stage-out = 0 s
[2025-06-04 11:35:05] 2025-06-04 15:34:46,234 | INFO     | . log creation = 0 s
[2025-06-04 11:35:05] 2025-06-04 15:34:46,234 | INFO     | ..............................
[2025-06-04 11:35:05] 2025-06-04 15:34:46,310 | INFO     | 
[2025-06-04 11:35:05] 2025-06-04 15:34:46,311 | INFO     | job summary report
[2025-06-04 11:35:05] 2025-06-04 15:34:46,311 | INFO     | --------------------------------------------------
[2025-06-04 11:35:05] 2025-06-04 15:34:46,311 | INFO     | PanDA job id: 6666906711
[2025-06-04 11:35:05] 2025-06-04 15:34:46,311 | INFO     | task id: 44871837
[2025-06-04 11:35:05] 2025-06-04 15:34:46,311 | INFO     | errors: (none)
[2025-06-04 11:35:05] 2025-06-04 15:34:46,311 | INFO     | status: LOG_TRANSFER = DONE 
[2025-06-04 11:35:05] 2025-06-04 15:34:46,311 | INFO     | pilot state: finished 
[2025-06-04 11:35:05] 2025-06-04 15:34:46,312 | INFO     | transexitcode: 0
[2025-06-04 11:35:05] 2025-06-04 15:34:46,312 | INFO     | exeerrorcode: 0
[2025-06-04 11:35:05] 2025-06-04 15:34:46,312 | INFO     | exeerrordiag: 
[2025-06-04 11:35:05] 2025-06-04 15:34:46,312 | INFO     | exitcode: 0
[2025-06-04 11:35:05] 2025-06-04 15:34:46,312 | INFO     | exitmsg: OK
[2025-06-04 11:35:05] 2025-06-04 15:34:46,312 | INFO     | cpuconsumptiontime: 30624 s
[2025-06-04 11:35:05] 2025-06-04 15:34:46,312 | INFO     | nevents: 400
[2025-06-04 11:35:05] 2025-06-04 15:34:46,312 | INFO     | neventsw: 0
[2025-06-04 11:35:05] 2025-06-04 15:34:46,312 | INFO     | pid: 2816905
[2025-06-04 11:35:05] 2025-06-04 15:34:46,313 | INFO     | pgrp: 2816905
[2025-06-04 11:35:05] 2025-06-04 15:34:46,313 | INFO     | corecount: 8
[2025-06-04 11:35:05] 2025-06-04 15:34:46,313 | INFO     | event service: False
[2025-06-04 11:35:05] 2025-06-04 15:34:46,313 | INFO     | sizes: {0: 2397390, 4: 2397596, 11: 2397624, 4482: 2423692, 4483: 2432633, 4486: 2432689, 4491: 2432987}
[2025-06-04 11:35:05] 2025-06-04 15:34:46,313 | INFO     | --------------------------------------------------
[2025-06-04 11:35:05] 2025-06-04 15:34:46,313 | INFO     | 
[2025-06-04 11:35:05] 2025-06-04 15:34:46,313 | INFO     | executing command: ls -lF /tmp/boinchome/slots/0
[2025-06-04 11:35:05] 2025-06-04 15:34:46,334 | INFO     | queue jobs had 0 job(s) [purged]
[2025-06-04 11:35:05] 2025-06-04 15:34:46,334 | INFO     | queue payloads had 0 job(s) [purged]
[2025-06-04 11:35:05] 2025-06-04 15:34:46,334 | INFO     | queue data_in had 0 job(s) [purged]
[2025-06-04 11:35:05] 2025-06-04 15:34:46,334 | INFO     | queue data_out had 0 job(s) [purged]
[2025-06-04 11:35:05] 2025-06-04 15:34:46,334 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-06-04 11:35:05] 2025-06-04 15:34:46,334 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-06-04 11:35:05] 2025-06-04 15:34:46,334 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-06-04 11:35:05] 2025-06-04 15:34:46,334 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-06-04 11:35:05] 2025-06-04 15:34:46,334 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-06-04 11:35:05] 2025-06-04 15:34:46,334 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-06-04 11:35:05] 2025-06-04 15:34:46,334 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-06-04 11:35:05] 2025-06-04 15:34:46,334 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-06-04 11:35:05] 2025-06-04 15:34:46,334 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-06-04 11:35:05] 2025-06-04 15:34:46,334 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-06-04 11:35:05] 2025-06-04 15:34:46,335 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-06-04 11:35:05] 2025-06-04 15:34:46,335 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-06-04 11:35:05] 2025-06-04 15:34:46,335 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-06-04 11:35:05] 2025-06-04 15:34:46,335 | INFO     | queue completed_jobids has 1 job(s)
[2025-06-04 11:35:05] 2025-06-04 15:34:46,335 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-06-04 11:35:05] 2025-06-04 15:34:46,335 | INFO     | queue messages had 0 job(s) [purged]
[2025-06-04 11:35:05] 2025-06-04 15:34:46,335 | INFO     | job 6666906711 has completed (purged errors)
[2025-06-04 11:35:05] 2025-06-04 15:34:46,335 | INFO     | overall cleanup function is called
[2025-06-04 11:35:05] 2025-06-04 15:34:47,342 | INFO     | --- collectZombieJob: --- 10, [2816905]
[2025-06-04 11:35:05] 2025-06-04 15:34:47,342 | INFO     | zombie collector waiting for pid 2816905
[2025-06-04 11:35:05] 2025-06-04 15:34:47,342 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-06-04 11:35:05] 2025-06-04 15:34:47,342 | INFO     | collected zombie processes
[2025-06-04 11:35:05] 2025-06-04 15:34:47,342 | INFO     | will attempt to kill all subprocesses of pid=2816905
[2025-06-04 11:35:05] 2025-06-04 15:34:47,516 | INFO     | process IDs to be killed: [2816905] (in reverse order)
[2025-06-04 11:35:05] 2025-06-04 15:34:47,578 | WARNING  | found no corresponding commands to process id(s)
[2025-06-04 11:35:05] 2025-06-04 15:34:47,579 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-06-04 11:35:05] 2025-06-04 15:34:47,586 | INFO     | did not find any defunct processes belonging to 2816905
[2025-06-04 11:35:05] 2025-06-04 15:34:47,593 | INFO     | did not find any defunct processes belonging to 2816905
[2025-06-04 11:35:05] 2025-06-04 15:34:47,593 | INFO     | ready for new job
[2025-06-04 11:35:05] 2025-06-04 15:34:47,593 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-06-04 11:35:05] 2025-06-04 15:34:47,594 | INFO     | **************************************
[2025-06-04 11:35:05] 2025-06-04 15:34:47,594 | INFO     | ***  PanDA Pilot version 3.10.2.2  ***
[2025-06-04 11:35:05] 2025-06-04 15:34:47,594 | INFO     | **************************************
[2025-06-04 11:35:05] 2025-06-04 15:34:47,594 | INFO     | 
[2025-06-04 11:35:05] 2025-06-04 15:34:47,610 | INFO     | architecture information:
[2025-06-04 11:35:05] 2025-06-04 15:34:47,610 | INFO     | executing command: cat /etc/os-release
[2025-06-04 11:35:05] 2025-06-04 15:34:47,623 | INFO     | cat /etc/os-release:
[2025-06-04 11:35:05] NAME="CentOS Linux"
[2025-06-04 11:35:05] VERSION="7 (Core)"
[2025-06-04 11:35:05] ID="centos"
[2025-06-04 11:35:05] ID_LIKE="rhel fedora"
[2025-06-04 11:35:05] VERSION_ID="7"
[2025-06-04 11:35:05] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-06-04 11:35:05] ANSI_COLOR="0;31"
[2025-06-04 11:35:05] CPE_NAME="cpe:/o:centos:centos:7"
[2025-06-04 11:35:05] HOME_URL="https://www.centos.org/"
[2025-06-04 11:35:05] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-06-04 11:35:05] 
[2025-06-04 11:35:05] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-06-04 11:35:05] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-06-04 11:35:05] REDHAT_SUPPORT_PRODUCT="centos"
[2025-06-04 11:35:05] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-06-04 11:35:05] 
[2025-06-04 11:35:05] 2025-06-04 15:34:47,623 | INFO     | **************************************
[2025-06-04 11:35:05] 2025-06-04 15:34:48,126 | INFO     | executing command: df -mP /tmp/boinchome/slots/0
[2025-06-04 11:35:05] 2025-06-04 15:34:48,144 | INFO     | sufficient remaining disk space (96616841216 B)
[2025-06-04 11:35:05] 2025-06-04 15:34:48,144 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-06-04 11:35:05] 2025-06-04 15:34:48,145 | INFO     | current server update state: UPDATING_FINAL
[2025-06-04 11:35:05] 2025-06-04 15:34:48,145 | INFO     | update_server=False
[2025-06-04 11:35:05] 2025-06-04 15:34:48,145 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-06-04 11:35:05] 2025-06-04 15:34:48,145 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-06-04 11:35:05] 2025-06-04 15:34:48,146 | WARNING  | aborting monitor loop since graceful_stop has been set (timing out remaining threads)
[2025-06-04 11:35:05] 2025-06-04 15:34:48,146 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-06-04 11:35:05] 2025-06-04 15:34:48,147 | INFO     | found 0 job(s) in 20 queues
[2025-06-04 11:35:05] 2025-06-04 15:34:48,147 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-06-04 11:35:05] 2025-06-04 15:34:48,147 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-06-04 11:35:05] 2025-06-04 15:34:48,158 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-06-04 11:35:05] 2025-06-04 15:34:48,159 | INFO     | aborting loop
[2025-06-04 11:35:05] 2025-06-04 15:34:48,328 | INFO     | all data control threads have been joined
[2025-06-04 11:35:05] 2025-06-04 15:34:49,070 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-06-04 11:35:05] 2025-06-04 15:34:49,150 | INFO     | [job] retrieve thread has finished
[2025-06-04 11:35:05] 2025-06-04 15:34:49,151 | INFO     | [job] queue monitor thread has finished
[2025-06-04 11:35:05] 2025-06-04 15:34:49,164 | INFO     | [job] job monitor thread has finished
[2025-06-04 11:35:05] 2025-06-04 15:34:49,227 | INFO     | all job control threads have been joined
[2025-06-04 11:35:05] 2025-06-04 15:34:49,332 | INFO     | [data] control thread has finished
[2025-06-04 11:35:05] 2025-06-04 15:34:49,521 | INFO     | all payload control threads have been joined
[2025-06-04 11:35:05] 2025-06-04 15:34:49,644 | INFO     | [payload] failed_post thread has finished
[2025-06-04 11:35:05] 2025-06-04 15:34:50,190 | INFO     | [payload] validate_post thread has finished
[2025-06-04 11:35:05] 2025-06-04 15:34:50,233 | INFO     | [job] control thread has finished
[2025-06-04 11:35:05] 2025-06-04 15:34:50,261 | INFO     | [job] validate thread has finished
[2025-06-04 11:35:05] 2025-06-04 15:34:50,262 | INFO     | [job] create_data_payload thread has finished
[2025-06-04 11:35:05] 2025-06-04 15:34:50,330 | INFO     | [data] copytool_in thread has finished
[2025-06-04 11:35:05] 2025-06-04 15:34:50,405 | INFO     | [payload] validate_pre thread has finished
[2025-06-04 11:35:05] 2025-06-04 15:34:50,525 | INFO     | [payload] control thread has finished
[2025-06-04 11:35:05] 2025-06-04 15:34:50,550 | INFO     | [payload] execute_payloads thread has finished
[2025-06-04 11:35:05] 2025-06-04 15:34:51,076 | INFO     | [data] copytool_out thread has finished
[2025-06-04 11:35:05] 2025-06-04 15:34:52,152 | INFO     | [data] queue_monitor thread has finished
[2025-06-04 11:35:05] 2025-06-04 15:34:58,519 | INFO     | job.realtimelogging is not enabled
[2025-06-04 11:35:05] 2025-06-04 15:34:59,524 | INFO     | [payload] run_realtimelog thread has finished
[2025-06-04 11:35:05] 2025-06-04 15:34:59,770 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140473928062784)>', '<ExcThread(monitor, started 140473565943552)>']
[2025-06-04 11:35:05] 2025-06-04 15:35:00,205 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-06-04 11:35:05] 2025-06-04 15:35:00,206 | INFO     | [monitor] control thread has ended
[2025-06-04 11:35:05] 2025-06-04 15:35:04,791 | INFO     | all workflow threads have been joined
[2025-06-04 11:35:05] 2025-06-04 15:35:04,792 | INFO     | end of generic workflow (traces error code: 0)
[2025-06-04 11:35:05] 2025-06-04 15:35:04,792 | INFO     | traces error code: 0
[2025-06-04 11:35:05] 2025-06-04 15:35:04,792 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-06-04 11:35:05] 2025-06-04 15:35:04,888 [wrapper] ==== pilot stdout END ====
[2025-06-04 11:35:05] 2025-06-04 15:35:04,891 [wrapper] ==== wrapper stdout RESUME ====
[2025-06-04 11:35:05] 2025-06-04 15:35:04,894 [wrapper] pilotpid: 2810333
[2025-06-04 11:35:05] 2025-06-04 15:35:04,897 [wrapper] Pilot exit status: 0
[2025-06-04 11:35:05] 2025-06-04 15:35:04,908 [wrapper] pandaids: 6666906711
[2025-06-04 11:35:05] 2025-06-04 15:35:04,961 [wrapper] cleanup supervisor_pilot 3049219 2810334
[2025-06-04 11:35:05] 2025-06-04 15:35:04,965 [wrapper] Test setup, not cleaning
[2025-06-04 11:35:05] 2025-06-04 15:35:04,968 [wrapper] apfmon messages muted
[2025-06-04 11:35:05] 2025-06-04 15:35:04,971 [wrapper] ==== wrapper stdout END ====
[2025-06-04 11:35:05] 2025-06-04 15:35:04,974 [wrapper] ==== wrapper stderr END ====
[2025-06-04 11:35:05]  *** Error codes and diagnostics ***
[2025-06-04 11:35:05]     "exeErrorCode": 0,
[2025-06-04 11:35:05]     "exeErrorDiag": "",
[2025-06-04 11:35:05]     "pilotErrorCode": 0,
[2025-06-04 11:35:05]     "pilotErrorDiag": "",
[2025-06-04 11:35:05]  *** Listing of results directory ***
[2025-06-04 11:35:05] total 411816
[2025-06-04 11:35:05] -rw-r--r--. 1 boincer umatlas    495897 May 27 06:25 pilot3.tar.gz
[2025-06-04 11:35:05] -rwx------. 1 boincer umatlas     37140 May 27 06:38 runpilot2-wrapper.sh
[2025-06-04 11:35:05] -rw-r--r--. 1 boincer umatlas      5111 May 27 06:38 queuedata.json
[2025-06-04 11:35:05] -rw-r--r--. 1 boincer umatlas       100 Jun  4 10:19 wrapper_26015_x86_64-pc-linux-gnu
[2025-06-04 11:35:05] -rwxr-xr-x. 1 boincer umatlas      7986 Jun  4 10:19 run_atlas
[2025-06-04 11:35:05] -rw-r--r--. 1 boincer umatlas       105 Jun  4 10:19 job.xml
[2025-06-04 11:35:05] -rw-r--r--. 2 boincer umatlas 222870182 Jun  4 10:19 EVNT.44871834._002599.pool.root.1
[2025-06-04 11:35:05] -rw-r--r--. 2 boincer umatlas     15093 Jun  4 10:19 start_atlas.sh
[2025-06-04 11:35:05] drwxrwx--x. 2 boincer umatlas      4096 Jun  4 10:19 shared
[2025-06-04 11:35:05] -rw-r--r--. 2 boincer umatlas    508872 Jun  4 10:19 input.tar.gz
[2025-06-04 11:35:05] -rw-r--r--. 1 boincer umatlas         0 Jun  4 10:19 boinc_lockfile
[2025-06-04 11:35:05] -rw-r--r--. 1 boincer umatlas      2558 Jun  4 10:19 pandaJob.out
[2025-06-04 11:35:05] -rw-------. 1 boincer umatlas    986819 Jun  4 10:19 agis_schedconf.cvmfs.json
[2025-06-04 11:35:05] -rw-------. 1 boincer umatlas   1598969 Jun  4 10:19 agis_ddmendpoints.agis.ALL.json
[2025-06-04 11:35:05] drwx------. 4 boincer umatlas      4096 Jun  4 10:19 pilot3
[2025-06-04 11:35:05] -rw-r--r--. 1 boincer umatlas      6858 Jun  4 11:31 init_data.xml
[2025-06-04 11:35:05] -rw-------. 1 boincer umatlas        95 Jun  4 11:34 pilot_heartbeat.json
[2025-06-04 11:35:05] -rw-------. 1 boincer umatlas 193523622 Jun  4 11:34 HITS.44871837._065984.pool.root.1
[2025-06-04 11:35:05] -rw-r--r--. 1 boincer umatlas       529 Jun  4 11:34 boinc_task_state.xml
[2025-06-04 11:35:05] -rw-------. 1 boincer umatlas      1041 Jun  4 11:34 memory_monitor_summary.json
[2025-06-04 11:35:05] -rw-------. 1 boincer umatlas    291989 Jun  4 11:34 log.44871837._065984.job.log.tgz.1
[2025-06-04 11:35:05] -rw-------. 1 boincer umatlas      7720 Jun  4 11:34 heartbeat.json
[2025-06-04 11:35:05] -rw-r--r--. 1 boincer umatlas      8192 Jun  4 11:34 boinc_mmap_file
[2025-06-04 11:35:05] -rw-r--r--. 1 boincer umatlas        27 Jun  4 11:34 wrapper_checkpoint.txt
[2025-06-04 11:35:05] -rw-------. 1 boincer umatlas      4548 Jun  4 11:35 pilotlog.txt
[2025-06-04 11:35:05] -rw-------. 1 boincer umatlas    445362 Jun  4 11:35 log.44871837._065984.job.log.1
[2025-06-04 11:35:05] -rw-------. 1 boincer umatlas       357 Jun  4 11:35 output.list
[2025-06-04 11:35:05] -rw-r--r--. 1 boincer umatlas       620 Jun  4 11:35 runtime_log
[2025-06-04 11:35:05] -rw-------. 1 boincer umatlas    757760 Jun  4 11:35 result.tar.gz
[2025-06-04 11:35:05] -rw-r--r--. 1 boincer umatlas      8669 Jun  4 11:35 runtime_log.err
[2025-06-04 11:35:05] -rw-------. 1 boincer umatlas       653 Jun  4 11:35 6pZKDmjs6d7nsSi4ap6QjLDmwznN0nGgGQJmUXzaDmGAZKDmyPvvOm.diag
[2025-06-04 11:35:05] -rw-r--r--. 1 boincer umatlas     21514 Jun  4 11:35 stderr.txt
[2025-06-04 11:35:05] HITS file was successfully produced:
[2025-06-04 11:35:05] -rw-------. 1 boincer umatlas 193523622 Jun  4 11:34 shared/HITS.pool.root.1
[2025-06-04 11:35:05]  *** Contents of shared directory: ***
[2025-06-04 11:35:05] total 407900
[2025-06-04 11:35:05] -rw-r--r--. 2 boincer umatlas 222870182 Jun  4 10:19 ATLAS.root_0
[2025-06-04 11:35:05] -rw-r--r--. 2 boincer umatlas     15093 Jun  4 10:19 start_atlas.sh
[2025-06-04 11:35:05] -rw-r--r--. 2 boincer umatlas    508872 Jun  4 10:19 input.tar.gz
[2025-06-04 11:35:05] -rw-------. 1 boincer umatlas 193523622 Jun  4 11:34 HITS.pool.root.1
[2025-06-04 11:35:05] -rw-------. 1 boincer umatlas    757760 Jun  4 11:35 result.tar.gz
11:35:06 (2806713): run_atlas exited; CPU time 30765.397293
11:35:06 (2806713): called boinc_finish(0)

</stderr_txt>
]]>

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