Stderr output

<core_client_version>7.7.0</core_client_version>
<![CDATA[
<stderr_txt>
10:11:56 (13197): wrapper (7.7.26015): starting
10:11:56 (13197): wrapper: running run_atlas (--nthreads 8)
[2025-06-04 10:11:56] Arguments: --nthreads 8
[2025-06-04 10:11:56] Threads: 8
[2025-06-04 10:11:56] Checking for CVMFS
[2025-06-04 10:11:56] Probing /cvmfs/atlas.cern.ch... OK
[2025-06-04 10:11:56] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-06-04 10:11:56] Running cvmfs_config stat atlas.cern.ch
[2025-06-04 10:11:57] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-06-04 10:11:57] 2.11.2.0 74184 12798 356900 146781 0 457 18419508 18432001 11868 130560 0 76442689 99.626 56693074 42707 http://cvmfs-s1fnal.opensciencegrid.org:8000/cvmfs/atlas.cern.ch http://192.41.237.109:6081 1
[2025-06-04 10:11:57] CVMFS is ok
[2025-06-04 10:11:57] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-06-04 10:11:57] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2025-06-04 10:11:57] Further information can be found at the LHC@home message board.
[2025-06-04 10:11:57] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-06-04 10:11:57] Checking for apptainer binary...
[2025-06-04 10:11:57] Using apptainer found in PATH at /usr/bin/apptainer
[2025-06-04 10:11:57] Running /usr/bin/apptainer --version
[2025-06-04 10:11:57] apptainer version 1.3.2-1.el7
[2025-06-04 10:11:57] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-06-04 10:11:58] c-212-13.aglt2.org
[2025-06-04 10:11:58] apptainer works
[2025-06-04 10:11:58] Set ATHENA_PROC_NUMBER=8
[2025-06-04 10:11:58] Set ATHENA_CORE_NUMBER=8
[2025-06-04 10:11:58] Starting ATLAS job with PandaID=6678313347
[2025-06-04 10:11:58] Running command: /usr/bin/apptainer exec -B /cvmfs,/tmp/boinchome/slots/0 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-06-04 11:10:36]  *** The last 200 lines of the pilot log: ***
[2025-06-04 11:10:36]  is_tar=False
[2025-06-04 11:10:36]  lfn=log.45006595._052441.job.log.tgz.1
[2025-06-04 11:10:36]  mtime=0
[2025-06-04 11:10:36]  protocol_id=None
[2025-06-04 11:10:36]  protocols=[{'endpoint': 'davs://dav.ndgf.org:443', 'flavour': 'WEBDAV', 'id': 331, 'path': '/atlas/disk/atlasdatadisk/rucio/'}]
[2025-06-04 11:10:36]  replicas=None
[2025-06-04 11:10:36]  scope=mc23_13p6TeV
[2025-06-04 11:10:36]  status=None
[2025-06-04 11:10:36]  status_code=0
[2025-06-04 11:10:36]  storage_token=
[2025-06-04 11:10:36]  surl=/tmp/boinchome/slots/0/PanDA_Pilot-6678313347/log.45006595._052441.job.log.tgz.1
[2025-06-04 11:10:36]  turl=davs://dav.ndgf.org:443/atlas/disk/atlasdatadisk/rucio/mc23_13p6TeV/78/32/log.45006595._052441.job.log.tgz.1
[2025-06-04 11:10:36]  workdir=None
[2025-06-04 11:10:36] ]
[2025-06-04 11:10:36] 2025-06-04 15:10:08,253 | INFO     | transferring file log.45006595._052441.job.log.tgz.1 from /tmp/boinchome/slots/0/PanDA_Pilot-6678313347/log.45006595._052441.job.log.tgz.1 to /tmp/boinchome/slots/
[2025-06-04 11:10:36] 2025-06-04 15:10:08,253 | INFO     | executing command: /usr/bin/env mv /tmp/boinchome/slots/0/PanDA_Pilot-6678313347/log.45006595._052441.job.log.tgz.1 /tmp/boinchome/slots/0/log.45006595._052441.job
[2025-06-04 11:10:36] 2025-06-04 15:10:08,272 | INFO     | adding to output.list: log.45006595._052441.job.log.tgz.1 davs://dav.ndgf.org:443/atlas/disk/atlasdatadisk/rucio/mc23_13p6TeV/78/32/log.45006595._052441.job.log.tg
[2025-06-04 11:10:36] 2025-06-04 15:10:08,272 | INFO     | alt stage-out settings: ['pl', 'write_lan', 'w', 'default'], allow_altstageout=False, remain_files=0, has_altstorage=True
[2025-06-04 11:10:36] 2025-06-04 15:10:08,273 | INFO     | summary of transferred files:
[2025-06-04 11:10:36] 2025-06-04 15:10:08,273 | INFO     |  -- lfn=log.45006595._052441.job.log.tgz.1, status_code=0, status=transferred
[2025-06-04 11:10:36] 2025-06-04 15:10:08,273 | INFO     | stage-out finished correctly
[2025-06-04 11:10:36] 2025-06-04 15:10:09,231 | INFO     | finished stage-out for finished payload, adding job to finished_jobs queue
[2025-06-04 11:10:36] 2025-06-04 15:10:09,732 | INFO     | monitor loop #264: job 0:6678313347 is in state 'finished'
[2025-06-04 11:10:36] 2025-06-04 15:10:09,732 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-06-04 11:10:36] 2025-06-04 15:10:10,301 | INFO     | job 6678313347 has state=finished
[2025-06-04 11:10:36] 2025-06-04 15:10:10,301 | INFO     | preparing for final server update for job 6678313347 in state='finished'
[2025-06-04 11:10:36] 2025-06-04 15:10:10,301 | INFO     | this job has now completed (state=finished)
[2025-06-04 11:10:36] 2025-06-04 15:10:10,301 | INFO     | pilot will not update the server (heartbeat message will be written to file)
[2025-06-04 11:10:36] 2025-06-04 15:10:10,301 | INFO     | log transfer has been attempted: DONE
[2025-06-04 11:10:36] 2025-06-04 15:10:10,301 | INFO     | job 6678313347 has finished - writing final server update
[2025-06-04 11:10:36] 2025-06-04 15:10:10,301 | INFO     | total number of processed events: 400 (read)
[2025-06-04 11:10:36] 2025-06-04 15:10:10,305 | INFO     | executing command: lscpu
[2025-06-04 11:10:36] 2025-06-04 15:10:10,377 | INFO     | executing command: export ATLAS_LOCAL_ROOT_BASE=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase;source ${ATLAS_LOCAL_ROOT_BASE}/user/atlasLocalSetup.sh --quiet;lsetup
[2025-06-04 11:10:36] 2025-06-04 15:10:12,235 | INFO     | monitor loop #265: job 0:6678313347 is in state 'finished'
[2025-06-04 11:10:36] 2025-06-04 15:10:12,235 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-06-04 11:10:36] 2025-06-04 15:10:14,737 | INFO     | monitor loop #266: job 0:6678313347 is in state 'finished'
[2025-06-04 11:10:36] 2025-06-04 15:10:14,737 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-06-04 11:10:36] 2025-06-04 15:10:15,032 | INFO     | CPU arch script returned: x86-64-v3
[2025-06-04 11:10:36] 2025-06-04 15:10:15,033 | INFO     | using path: /tmp/boinchome/slots/0/PanDA_Pilot-6678313347/memory_monitor_summary.json (trf name=prmon)
[2025-06-04 11:10:36] 2025-06-04 15:10:15,033 | INFO     | extracted standard info from prmon json
[2025-06-04 11:10:36] 2025-06-04 15:10:15,034 | INFO     | extracted standard memory fields from prmon json
[2025-06-04 11:10:36] 2025-06-04 15:10:15,034 | WARNING  | GPU info not found in prmon json: 'gpu'
[2025-06-04 11:10:36] 2025-06-04 15:10:15,034 | WARNING  | format EVNTtoHITS has no such key: dbData
[2025-06-04 11:10:36] 2025-06-04 15:10:15,034 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2025-06-04 11:10:36] 2025-06-04 15:10:15,035 | INFO     | fitting pss+swap vs Time
[2025-06-04 11:10:36] 2025-06-04 15:10:15,035 | INFO     | sum of square deviations: 38744912.5
[2025-06-04 11:10:36] 2025-06-04 15:10:15,035 | INFO     | sum of deviations: -478528865.5000001
[2025-06-04 11:10:36] 2025-06-04 15:10:15,035 | INFO     | mean x: 1749048169.5
[2025-06-04 11:10:36] 2025-06-04 15:10:15,035 | INFO     | mean y: 2494534.46
[2025-06-04 11:10:36] 2025-06-04 15:10:15,035 | INFO     | -- intersect: 21604557418.346676
[2025-06-04 11:10:36] 2025-06-04 15:10:15,035 | INFO     | intersect: 21604557418.346676
[2025-06-04 11:10:36] 2025-06-04 15:10:15,035 | INFO     | chi2: 0.0016131496325618377
[2025-06-04 11:10:36] 2025-06-04 15:10:15,035 | INFO     | -- intersect: 21604557418.346676
[2025-06-04 11:10:36] 2025-06-04 15:10:15,035 | INFO     | current memory leak: -12.35 B/s (using 50 data points, chi2=0.00)
[2025-06-04 11:10:36] 2025-06-04 15:10:15,036 | INFO     | ..............................
[2025-06-04 11:10:36] 2025-06-04 15:10:15,036 | INFO     | . Timing measurements:
[2025-06-04 11:10:36] 2025-06-04 15:10:15,036 | INFO     | . get job = 0 s
[2025-06-04 11:10:36] 2025-06-04 15:10:15,036 | INFO     | . initial setup = 2 s
[2025-06-04 11:10:36] 2025-06-04 15:10:15,036 | INFO     | . payload setup = 12 s
[2025-06-04 11:10:36] 2025-06-04 15:10:15,036 | INFO     | . stage-in = 0 s
[2025-06-04 11:10:36] 2025-06-04 15:10:15,036 | INFO     | . payload execution = 3438 s
[2025-06-04 11:10:36] 2025-06-04 15:10:15,036 | INFO     | . stage-out = 0 s
[2025-06-04 11:10:36] 2025-06-04 15:10:15,036 | INFO     | . log creation = 0 s
[2025-06-04 11:10:36] 2025-06-04 15:10:15,036 | INFO     | ..............................
[2025-06-04 11:10:36] 2025-06-04 15:10:15,236 | INFO     | 
[2025-06-04 11:10:36] 2025-06-04 15:10:15,236 | INFO     | job summary report
[2025-06-04 11:10:36] 2025-06-04 15:10:15,236 | INFO     | --------------------------------------------------
[2025-06-04 11:10:36] 2025-06-04 15:10:15,236 | INFO     | PanDA job id: 6678313347
[2025-06-04 11:10:36] 2025-06-04 15:10:15,236 | INFO     | task id: 45006595
[2025-06-04 11:10:36] 2025-06-04 15:10:15,236 | INFO     | errors: (none)
[2025-06-04 11:10:36] 2025-06-04 15:10:15,236 | INFO     | status: LOG_TRANSFER = DONE 
[2025-06-04 11:10:36] 2025-06-04 15:10:15,236 | INFO     | pilot state: finished 
[2025-06-04 11:10:36] 2025-06-04 15:10:15,236 | INFO     | transexitcode: 0
[2025-06-04 11:10:36] 2025-06-04 15:10:15,236 | INFO     | exeerrorcode: 0
[2025-06-04 11:10:36] 2025-06-04 15:10:15,237 | INFO     | exeerrordiag: 
[2025-06-04 11:10:36] 2025-06-04 15:10:15,237 | INFO     | exitcode: 0
[2025-06-04 11:10:36] 2025-06-04 15:10:15,237 | INFO     | exitmsg: OK
[2025-06-04 11:10:36] 2025-06-04 15:10:15,237 | INFO     | cpuconsumptiontime: 25323 s
[2025-06-04 11:10:36] 2025-06-04 15:10:15,237 | INFO     | nevents: 400
[2025-06-04 11:10:36] 2025-06-04 15:10:15,237 | INFO     | neventsw: 0
[2025-06-04 11:10:36] 2025-06-04 15:10:15,237 | INFO     | pid: 32145
[2025-06-04 11:10:36] 2025-06-04 15:10:15,237 | INFO     | pgrp: 32145
[2025-06-04 11:10:36] 2025-06-04 15:10:15,237 | INFO     | corecount: 8
[2025-06-04 11:10:36] 2025-06-04 15:10:15,237 | INFO     | event service: False
[2025-06-04 11:10:36] 2025-06-04 15:10:15,237 | INFO     | sizes: {0: 2397114, 1: 2397369, 7: 2397575, 11: 2397603, 3454: 2423061, 3455: 2423060, 3456: 2432213, 3457: 2432269, 3463: 2432439}
[2025-06-04 11:10:36] 2025-06-04 15:10:15,237 | INFO     | --------------------------------------------------
[2025-06-04 11:10:36] 2025-06-04 15:10:15,237 | INFO     | 
[2025-06-04 11:10:36] 2025-06-04 15:10:15,237 | INFO     | executing command: ls -lF /tmp/boinchome/slots/0
[2025-06-04 11:10:36] 2025-06-04 15:10:15,275 | INFO     | queue jobs had 0 job(s) [purged]
[2025-06-04 11:10:36] 2025-06-04 15:10:15,275 | INFO     | queue payloads had 0 job(s) [purged]
[2025-06-04 11:10:36] 2025-06-04 15:10:15,275 | INFO     | queue data_in had 0 job(s) [purged]
[2025-06-04 11:10:36] 2025-06-04 15:10:15,275 | INFO     | queue data_out had 0 job(s) [purged]
[2025-06-04 11:10:36] 2025-06-04 15:10:15,275 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-06-04 11:10:36] 2025-06-04 15:10:15,275 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-06-04 11:10:36] 2025-06-04 15:10:15,275 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-06-04 11:10:36] 2025-06-04 15:10:15,275 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-06-04 11:10:36] 2025-06-04 15:10:15,275 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-06-04 11:10:36] 2025-06-04 15:10:15,275 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-06-04 11:10:36] 2025-06-04 15:10:15,275 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-06-04 11:10:36] 2025-06-04 15:10:15,275 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-06-04 11:10:36] 2025-06-04 15:10:15,275 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-06-04 11:10:36] 2025-06-04 15:10:15,275 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-06-04 11:10:36] 2025-06-04 15:10:15,275 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-06-04 11:10:36] 2025-06-04 15:10:15,275 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-06-04 11:10:36] 2025-06-04 15:10:15,276 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-06-04 11:10:36] 2025-06-04 15:10:15,276 | INFO     | queue completed_jobids has 1 job(s)
[2025-06-04 11:10:36] 2025-06-04 15:10:15,276 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-06-04 11:10:36] 2025-06-04 15:10:15,276 | INFO     | queue messages had 0 job(s) [purged]
[2025-06-04 11:10:36] 2025-06-04 15:10:15,276 | INFO     | job 6678313347 has completed (purged errors)
[2025-06-04 11:10:36] 2025-06-04 15:10:15,276 | INFO     | overall cleanup function is called
[2025-06-04 11:10:36] 2025-06-04 15:10:16,278 | INFO     | --- collectZombieJob: --- 10, [32145]
[2025-06-04 11:10:36] 2025-06-04 15:10:16,278 | INFO     | zombie collector waiting for pid 32145
[2025-06-04 11:10:36] 2025-06-04 15:10:16,278 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-06-04 11:10:36] 2025-06-04 15:10:16,278 | INFO     | collected zombie processes
[2025-06-04 11:10:36] 2025-06-04 15:10:16,278 | INFO     | will attempt to kill all subprocesses of pid=32145
[2025-06-04 11:10:36] 2025-06-04 15:10:16,411 | INFO     | process IDs to be killed: [32145] (in reverse order)
[2025-06-04 11:10:36] 2025-06-04 15:10:16,493 | WARNING  | found no corresponding commands to process id(s)
[2025-06-04 11:10:36] 2025-06-04 15:10:16,493 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-06-04 11:10:36] 2025-06-04 15:10:16,498 | INFO     | did not find any defunct processes belonging to 32145
[2025-06-04 11:10:36] 2025-06-04 15:10:16,502 | INFO     | did not find any defunct processes belonging to 32145
[2025-06-04 11:10:36] 2025-06-04 15:10:16,502 | INFO     | ready for new job
[2025-06-04 11:10:36] 2025-06-04 15:10:16,502 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-06-04 11:10:36] 2025-06-04 15:10:16,503 | INFO     | **************************************
[2025-06-04 11:10:36] 2025-06-04 15:10:16,503 | INFO     | ***  PanDA Pilot version 3.10.2.2  ***
[2025-06-04 11:10:36] 2025-06-04 15:10:16,503 | INFO     | **************************************
[2025-06-04 11:10:36] 2025-06-04 15:10:16,503 | INFO     | 
[2025-06-04 11:10:36] 2025-06-04 15:10:16,505 | INFO     | architecture information:
[2025-06-04 11:10:36] 2025-06-04 15:10:16,506 | INFO     | executing command: cat /etc/os-release
[2025-06-04 11:10:36] 2025-06-04 15:10:16,520 | INFO     | cat /etc/os-release:
[2025-06-04 11:10:36] NAME="CentOS Linux"
[2025-06-04 11:10:36] VERSION="7 (Core)"
[2025-06-04 11:10:36] ID="centos"
[2025-06-04 11:10:36] ID_LIKE="rhel fedora"
[2025-06-04 11:10:36] VERSION_ID="7"
[2025-06-04 11:10:36] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-06-04 11:10:36] ANSI_COLOR="0;31"
[2025-06-04 11:10:36] CPE_NAME="cpe:/o:centos:centos:7"
[2025-06-04 11:10:36] HOME_URL="https://www.centos.org/"
[2025-06-04 11:10:36] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-06-04 11:10:36] 
[2025-06-04 11:10:36] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-06-04 11:10:36] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-06-04 11:10:36] REDHAT_SUPPORT_PRODUCT="centos"
[2025-06-04 11:10:36] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-06-04 11:10:36] 
[2025-06-04 11:10:36] 2025-06-04 15:10:16,520 | INFO     | **************************************
[2025-06-04 11:10:36] 2025-06-04 15:10:17,023 | INFO     | executing command: df -mP /tmp/boinchome/slots/0
[2025-06-04 11:10:36] 2025-06-04 15:10:17,155 | INFO     | sufficient remaining disk space (105006497792 B)
[2025-06-04 11:10:36] 2025-06-04 15:10:17,156 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-06-04 11:10:36] 2025-06-04 15:10:17,156 | INFO     | current server update state: UPDATING_FINAL
[2025-06-04 11:10:36] 2025-06-04 15:10:17,156 | INFO     | update_server=False
[2025-06-04 11:10:36] 2025-06-04 15:10:17,156 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-06-04 11:10:36] 2025-06-04 15:10:17,156 | WARNING  | aborting monitor loop since graceful_stop has been set (timing out remaining threads)
[2025-06-04 11:10:36] 2025-06-04 15:10:17,156 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-06-04 11:10:36] 2025-06-04 15:10:17,157 | INFO     | found 0 job(s) in 20 queues
[2025-06-04 11:10:36] 2025-06-04 15:10:17,157 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-06-04 11:10:36] 2025-06-04 15:10:17,157 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-06-04 11:10:36] 2025-06-04 15:10:17,240 | WARNING  | job monitor detected an abort_job request (signal=args.signal)
[2025-06-04 11:10:36] 2025-06-04 15:10:17,240 | WARNING  | cannot recover job monitoring - aborting pilot
[2025-06-04 11:10:36] 2025-06-04 15:10:17,241 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-06-04 11:10:36] 2025-06-04 15:10:17,241 | INFO     | will abort loop
[2025-06-04 11:10:36] 2025-06-04 15:10:17,282 | INFO     | all data control threads have been joined
[2025-06-04 11:10:36] 2025-06-04 15:10:17,792 | INFO     | all payload control threads have been joined
[2025-06-04 11:10:36] 2025-06-04 15:10:18,160 | INFO     | [job] retrieve thread has finished
[2025-06-04 11:10:36] 2025-06-04 15:10:18,246 | INFO     | [job] job monitor thread has finished
[2025-06-04 11:10:36] 2025-06-04 15:10:18,287 | INFO     | [data] control thread has finished
[2025-06-04 11:10:36] 2025-06-04 15:10:18,489 | INFO     | [data] copytool_in thread has finished
[2025-06-04 11:10:36] 2025-06-04 15:10:18,717 | INFO     | all job control threads have been joined
[2025-06-04 11:10:36] 2025-06-04 15:10:18,797 | INFO     | [payload] control thread has finished
[2025-06-04 11:10:36] 2025-06-04 15:10:18,912 | INFO     | [payload] validate_post thread has finished
[2025-06-04 11:10:36] 2025-06-04 15:10:19,162 | INFO     | [data] copytool_out thread has finished
[2025-06-04 11:10:36] 2025-06-04 15:10:19,304 | INFO     | [payload] execute_payloads thread has finished
[2025-06-04 11:10:36] 2025-06-04 15:10:19,502 | INFO     | [job] validate thread has finished
[2025-06-04 11:10:36] 2025-06-04 15:10:19,507 | INFO     | [job] create_data_payload thread has finished
[2025-06-04 11:10:36] 2025-06-04 15:10:19,539 | INFO     | [payload] validate_pre thread has finished
[2025-06-04 11:10:36] 2025-06-04 15:10:19,682 | INFO     | [payload] failed_post thread has finished
[2025-06-04 11:10:36] 2025-06-04 15:10:19,723 | INFO     | [job] control thread has finished
[2025-06-04 11:10:36] 2025-06-04 15:10:19,776 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-06-04 11:10:36] 2025-06-04 15:10:20,082 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-06-04 11:10:36] 2025-06-04 15:10:21,086 | INFO     | [job] queue monitor thread has finished
[2025-06-04 11:10:36] 2025-06-04 15:10:23,782 | INFO     | [data] queue_monitor thread has finished
[2025-06-04 11:10:36] 2025-06-04 15:10:27,961 | INFO     | job.realtimelogging is not enabled
[2025-06-04 11:10:36] 2025-06-04 15:10:28,966 | INFO     | [payload] run_realtimelog thread has finished
[2025-06-04 11:10:36] 2025-06-04 15:10:31,012 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140431150729024)>', '<ExcThread(monitor, started 140430716950272)>']
[2025-06-04 11:10:36] 2025-06-04 15:10:31,220 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-06-04 11:10:36] 2025-06-04 15:10:31,220 | INFO     | [monitor] control thread has ended
[2025-06-04 11:10:36] 2025-06-04 15:10:36,037 | INFO     | all workflow threads have been joined
[2025-06-04 11:10:36] 2025-06-04 15:10:36,037 | INFO     | end of generic workflow (traces error code: 0)
[2025-06-04 11:10:36] 2025-06-04 15:10:36,037 | INFO     | traces error code: 0
[2025-06-04 11:10:36] 2025-06-04 15:10:36,037 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-06-04 11:10:36] 2025-06-04 15:10:36,096 [wrapper] ==== pilot stdout END ====
[2025-06-04 11:10:36] 2025-06-04 15:10:36,100 [wrapper] ==== wrapper stdout RESUME ====
[2025-06-04 11:10:36] 2025-06-04 15:10:36,102 [wrapper] pilotpid: 18611
[2025-06-04 11:10:36] 2025-06-04 15:10:36,103 [wrapper] Pilot exit status: 0
[2025-06-04 11:10:36] 2025-06-04 15:10:36,109 [wrapper] pandaids: 6678313347
[2025-06-04 11:10:36] 2025-06-04 15:10:36,167 [wrapper] cleanup supervisor_pilot 80746 18612
[2025-06-04 11:10:36] 2025-06-04 15:10:36,169 [wrapper] Test setup, not cleaning
[2025-06-04 11:10:36] 2025-06-04 15:10:36,172 [wrapper] apfmon messages muted
[2025-06-04 11:10:36] 2025-06-04 15:10:36,174 [wrapper] ==== wrapper stdout END ====
[2025-06-04 11:10:36] 2025-06-04 15:10:36,176 [wrapper] ==== wrapper stderr END ====
[2025-06-04 11:10:36]  *** Error codes and diagnostics ***
[2025-06-04 11:10:36]     "exeErrorCode": 0,
[2025-06-04 11:10:36]     "exeErrorDiag": "",
[2025-06-04 11:10:36]     "pilotErrorCode": 0,
[2025-06-04 11:10:36]     "pilotErrorDiag": "",
[2025-06-04 11:10:36]  *** Listing of results directory ***
[2025-06-04 11:10:36] total 390556
[2025-06-04 11:10:36] -rw-r--r-- 1 boincer umatlas    495897 Jun  4 00:04 pilot3.tar.gz
[2025-06-04 11:10:36] -rw-r--r-- 1 boincer umatlas      5111 Jun  4 00:17 queuedata.json
[2025-06-04 11:10:36] -rwx------ 1 boincer umatlas     37140 Jun  4 00:18 runpilot2-wrapper.sh
[2025-06-04 11:10:36] -rw-r--r-- 1 boincer umatlas       100 Jun  4 10:11 wrapper_26015_x86_64-pc-linux-gnu
[2025-06-04 11:10:36] -rwxr-xr-x 1 boincer umatlas      7986 Jun  4 10:11 run_atlas
[2025-06-04 11:10:36] -rw-r--r-- 1 boincer umatlas       105 Jun  4 10:11 job.xml
[2025-06-04 11:10:36] drwxrwx--x 2 boincer umatlas      4096 Jun  4 10:11 shared
[2025-06-04 11:10:36] -rw-r--r-- 2 boincer umatlas    508883 Jun  4 10:11 input.tar.gz
[2025-06-04 11:10:36] -rw-r--r-- 2 boincer umatlas 213896017 Jun  4 10:11 EVNT.45006593._002100.pool.root.1
[2025-06-04 11:10:36] -rw-r--r-- 2 boincer umatlas     15093 Jun  4 10:11 start_atlas.sh
[2025-06-04 11:10:36] -rw-r--r-- 1 boincer umatlas         0 Jun  4 10:11 boinc_lockfile
[2025-06-04 11:10:36] -rw-r--r-- 1 boincer umatlas      2524 Jun  4 10:11 pandaJob.out
[2025-06-04 11:10:36] -rw------- 1 boincer umatlas    986819 Jun  4 10:12 agis_schedconf.cvmfs.json
[2025-06-04 11:10:36] -rw------- 1 boincer umatlas   1598969 Jun  4 10:12 agis_ddmendpoints.agis.ALL.json
[2025-06-04 11:10:36] drwx------ 4 boincer umatlas      4096 Jun  4 10:12 pilot3
[2025-06-04 11:10:36] -rw------- 1 boincer umatlas 180904613 Jun  4 11:09 HITS.45006595._052441.pool.root.1
[2025-06-04 11:10:36] -rw-r--r-- 1 boincer umatlas       529 Jun  4 11:09 boinc_task_state.xml
[2025-06-04 11:10:36] -rw------- 1 boincer umatlas      1036 Jun  4 11:10 memory_monitor_summary.json
[2025-06-04 11:10:36] -rw------- 1 boincer umatlas        95 Jun  4 11:10 pilot_heartbeat.json
[2025-06-04 11:10:36] -rw------- 1 boincer umatlas    293303 Jun  4 11:10 log.45006595._052441.job.log.tgz.1
[2025-06-04 11:10:36] -rw------- 1 boincer umatlas      7701 Jun  4 11:10 heartbeat.json
[2025-06-04 11:10:36] -rw-r--r-- 1 boincer umatlas      6388 Jun  4 11:10 init_data.xml
[2025-06-04 11:10:36] -rw-r--r-- 1 boincer umatlas      8192 Jun  4 11:10 boinc_mmap_file
[2025-06-04 11:10:36] -rw-r--r-- 1 boincer umatlas        27 Jun  4 11:10 wrapper_checkpoint.txt
[2025-06-04 11:10:36] -rw------- 1 boincer umatlas      4735 Jun  4 11:10 pilotlog.txt
[2025-06-04 11:10:36] -rw------- 1 boincer umatlas    356030 Jun  4 11:10 log.45006595._052441.job.log.1
[2025-06-04 11:10:36] -rw------- 1 boincer umatlas       357 Jun  4 11:10 output.list
[2025-06-04 11:10:36] -rw-r--r-- 1 boincer umatlas       620 Jun  4 11:10 runtime_log
[2025-06-04 11:10:36] -rw------- 1 boincer umatlas    665600 Jun  4 11:10 result.tar.gz
[2025-06-04 11:10:36] -rw------- 1 boincer umatlas       655 Jun  4 11:10 VNyNDm9kug7nsSi4ap6QjLDmwznN0nGgGQJmUXzaDmZBnKDmqNAvvm.diag
[2025-06-04 11:10:36] -rw-r--r-- 1 boincer umatlas      8659 Jun  4 11:10 runtime_log.err
[2025-06-04 11:10:36] -rw-r--r-- 1 boincer umatlas     21474 Jun  4 11:10 stderr.txt
[2025-06-04 11:10:36] HITS file was successfully produced:
[2025-06-04 11:10:36] -rw------- 1 boincer umatlas 180904613 Jun  4 11:09 shared/HITS.pool.root.1
[2025-06-04 11:10:36]  *** Contents of shared directory: ***
[2025-06-04 11:10:36] total 386728
[2025-06-04 11:10:36] -rw-r--r-- 2 boincer umatlas    508883 Jun  4 10:11 input.tar.gz
[2025-06-04 11:10:36] -rw-r--r-- 2 boincer umatlas 213896017 Jun  4 10:11 ATLAS.root_0
[2025-06-04 11:10:36] -rw-r--r-- 2 boincer umatlas     15093 Jun  4 10:11 start_atlas.sh
[2025-06-04 11:10:36] -rw------- 1 boincer umatlas 180904613 Jun  4 11:09 HITS.pool.root.1
[2025-06-04 11:10:36] -rw------- 1 boincer umatlas    665600 Jun  4 11:10 result.tar.gz
11:10:37 (13197): run_atlas exited; CPU time 25243.445327
11:10:37 (13197): called boinc_finish(0)

</stderr_txt>
]]>

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