Stderr output

<core_client_version>8.1.0</core_client_version>
<![CDATA[
<stderr_txt>
10:10:38 (2135759): wrapper (7.7.26015): starting
10:10:38 (2135759): wrapper: running run_atlas (--nthreads 8)
[2025-06-04 10:10:38] Arguments: --nthreads 8
[2025-06-04 10:10:38] Threads: 8
[2025-06-04 10:10:38] Checking for CVMFS
[2025-06-04 10:10:38] Probing /cvmfs/atlas.cern.ch... OK
[2025-06-04 10:10:38] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-06-04 10:10:38] Running cvmfs_config stat atlas.cern.ch
[2025-06-04 10:10:38] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-06-04 10:10:38] 2.12.6.0 311205 23395 549940 146781 3 381 32052920 40960000 13801 16776704 1 127125153 99.728 88369082 24935 http://cvmfs-s1fnal.opensciencegrid.org:8000/cvmfs/atlas.cern.ch http://192.41.231.237:6081 1
[2025-06-04 10:10:38] CVMFS is ok
[2025-06-04 10:10:38] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-06-04 10:10:38] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2025-06-04 10:10:38] Further information can be found at the LHC@home message board.
[2025-06-04 10:10:38] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-06-04 10:10:38] Checking for apptainer binary...
[2025-06-04 10:10:38] Using apptainer found in PATH at /usr/bin/apptainer
[2025-06-04 10:10:38] Running /usr/bin/apptainer --version
[2025-06-04 10:10:38] apptainer version 1.4.1-1.el9
[2025-06-04 10:10:38] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-06-04 10:10:39] c7-10-13.aglt2.org
[2025-06-04 10:10:39] apptainer works
[2025-06-04 10:10:39] Set ATHENA_PROC_NUMBER=8
[2025-06-04 10:10:39] Set ATHENA_CORE_NUMBER=8
[2025-06-04 10:10:39] Starting ATLAS job with PandaID=6678312523
[2025-06-04 10:10:39] Running command: /usr/bin/apptainer exec -B /cvmfs,/tmp/boinchome/slots/1 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-06-04 11:11:33]  *** The last 200 lines of the pilot log: ***
[2025-06-04 11:11:33] 2025-06-04 15:11:03,274 | INFO     | .. there are 24 such processes running
[2025-06-04 11:11:33] 2025-06-04 15:11:03,368 | INFO     | number of running child processes to parent process 2147743: 1
[2025-06-04 11:11:33] 2025-06-04 15:11:03,368 | INFO     | maximum number of monitored processes: 6
[2025-06-04 11:11:33] 2025-06-04 15:11:03,368 | INFO     | will send heartbeat for job in 'finished' state
[2025-06-04 11:11:33] 2025-06-04 15:11:03,368 | INFO     | note: will only send 'running' state to server to prevent sending any final state too early
[2025-06-04 11:11:33] 2025-06-04 15:11:03,368 | INFO     | pilot will not update the server (heartbeat message will be written to file)
[2025-06-04 11:11:33] 2025-06-04 15:11:03,368 | INFO     | log transfer has been attempted: DONE
[2025-06-04 11:11:33] 2025-06-04 15:11:03,368 | INFO     | job 6678312523 has state 'running' - writing heartbeat
[2025-06-04 11:11:33] 2025-06-04 15:11:03,369 | INFO     | total number of processed events: 400 (read)
[2025-06-04 11:11:33] 2025-06-04 15:11:03,386 | INFO     | executing command: lscpu
[2025-06-04 11:11:33] 2025-06-04 15:11:03,467 | INFO     | executing command: export ATLAS_LOCAL_ROOT_BASE=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase;source ${ATLAS_LOCAL_ROOT_BASE}/user/atlasLocalSetup.sh --quiet;lsetup
[2025-06-04 11:11:33] 2025-06-04 15:11:04,207 | INFO     | job 6678312523 has state=finished
[2025-06-04 11:11:33] 2025-06-04 15:11:04,207 | INFO     | preparing for final server update for job 6678312523 in state='finished'
[2025-06-04 11:11:33] 2025-06-04 15:11:04,208 | INFO     | this job has now completed (state=finished)
[2025-06-04 11:11:33] 2025-06-04 15:11:04,208 | INFO     | pilot will not update the server (heartbeat message will be written to file)
[2025-06-04 11:11:33] 2025-06-04 15:11:04,208 | INFO     | log transfer has been attempted: DONE
[2025-06-04 11:11:33] 2025-06-04 15:11:04,208 | INFO     | job 6678312523 has finished - writing final server update
[2025-06-04 11:11:33] 2025-06-04 15:11:04,208 | INFO     | total number of processed events: 400 (read)
[2025-06-04 11:11:33] 2025-06-04 15:11:04,212 | INFO     | executing command: lscpu
[2025-06-04 11:11:33] 2025-06-04 15:11:07,814 | INFO     | CPU arch script returned: x86-64-v3
[2025-06-04 11:11:33] 2025-06-04 15:11:07,814 | INFO     | using path: /tmp/boinchome/slots/1/PanDA_Pilot-6678312523/memory_monitor_summary.json (trf name=prmon)
[2025-06-04 11:11:33] 2025-06-04 15:11:07,815 | INFO     | extracted standard info from prmon json
[2025-06-04 11:11:33] 2025-06-04 15:11:07,820 | INFO     | extracted standard memory fields from prmon json
[2025-06-04 11:11:33] 2025-06-04 15:11:07,820 | WARNING  | GPU info not found in prmon json: 'gpu'
[2025-06-04 11:11:33] 2025-06-04 15:11:07,821 | WARNING  | format EVNTtoHITS has no such key: dbData
[2025-06-04 11:11:33] 2025-06-04 15:11:07,821 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2025-06-04 11:11:33] 2025-06-04 15:11:07,823 | INFO     | fitting pss+swap vs Time
[2025-06-04 11:11:33] 2025-06-04 15:11:07,824 | INFO     | sum of square deviations: 43584073.0
[2025-06-04 11:11:33] 2025-06-04 15:11:07,824 | INFO     | sum of deviations: 2612284038.500001
[2025-06-04 11:11:33] 2025-06-04 15:11:07,824 | INFO     | mean x: 1749048134.5
[2025-06-04 11:11:33] 2025-06-04 15:11:07,825 | INFO     | mean y: 2168569.519230769
[2025-06-04 11:11:33] 2025-06-04 15:11:07,825 | INFO     | -- intersect: -104829945774.69437
[2025-06-04 11:11:33] 2025-06-04 15:11:07,825 | INFO     | intersect: -104829945774.69437
[2025-06-04 11:11:33] 2025-06-04 15:11:07,826 | INFO     | chi2: 0.7578009844326918
[2025-06-04 11:11:33] 2025-06-04 15:11:07,826 | INFO     | -- intersect: -104829945774.69437
[2025-06-04 11:11:33] 2025-06-04 15:11:07,826 | INFO     | current memory leak: 59.94 B/s (using 52 data points, chi2=0.76)
[2025-06-04 11:11:33] 2025-06-04 15:11:07,869 | INFO     | executing command: export ATLAS_LOCAL_ROOT_BASE=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase;source ${ATLAS_LOCAL_ROOT_BASE}/user/atlasLocalSetup.sh --quiet;lsetup
[2025-06-04 11:11:33] 2025-06-04 15:11:10,329 | INFO     | monitor loop #270: job 0:6678312523 is in state 'finished'
[2025-06-04 11:11:33] 2025-06-04 15:11:10,329 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-06-04 11:11:33] 2025-06-04 15:11:12,130 | INFO     | CPU arch script returned: x86-64-v3
[2025-06-04 11:11:33] 2025-06-04 15:11:12,131 | INFO     | using path: /tmp/boinchome/slots/1/PanDA_Pilot-6678312523/memory_monitor_summary.json (trf name=prmon)
[2025-06-04 11:11:33] 2025-06-04 15:11:12,131 | INFO     | extracted standard info from prmon json
[2025-06-04 11:11:33] 2025-06-04 15:11:12,131 | INFO     | extracted standard memory fields from prmon json
[2025-06-04 11:11:33] 2025-06-04 15:11:12,132 | WARNING  | GPU info not found in prmon json: 'gpu'
[2025-06-04 11:11:33] 2025-06-04 15:11:12,132 | WARNING  | format EVNTtoHITS has no such key: dbData
[2025-06-04 11:11:33] 2025-06-04 15:11:12,132 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2025-06-04 11:11:33] 2025-06-04 15:11:12,133 | INFO     | fitting pss+swap vs Time
[2025-06-04 11:11:33] 2025-06-04 15:11:12,133 | INFO     | sum of square deviations: 43584073.0
[2025-06-04 11:11:33] 2025-06-04 15:11:12,134 | INFO     | sum of deviations: 2612284038.500001
[2025-06-04 11:11:33] 2025-06-04 15:11:12,134 | INFO     | mean x: 1749048134.5
[2025-06-04 11:11:33] 2025-06-04 15:11:12,134 | INFO     | mean y: 2168569.519230769
[2025-06-04 11:11:33] 2025-06-04 15:11:12,134 | INFO     | -- intersect: -104829945774.69437
[2025-06-04 11:11:33] 2025-06-04 15:11:12,134 | INFO     | intersect: -104829945774.69437
[2025-06-04 11:11:33] 2025-06-04 15:11:12,134 | INFO     | chi2: 0.7578009844326918
[2025-06-04 11:11:33] 2025-06-04 15:11:12,134 | INFO     | -- intersect: -104829945774.69437
[2025-06-04 11:11:33] 2025-06-04 15:11:12,134 | INFO     | current memory leak: 59.94 B/s (using 52 data points, chi2=0.76)
[2025-06-04 11:11:33] 2025-06-04 15:11:12,134 | INFO     | ..............................
[2025-06-04 11:11:33] 2025-06-04 15:11:12,135 | INFO     | . Timing measurements:
[2025-06-04 11:11:33] 2025-06-04 15:11:12,135 | INFO     | . get job = 0 s
[2025-06-04 11:11:33] 2025-06-04 15:11:12,135 | INFO     | . initial setup = 2 s
[2025-06-04 11:11:33] 2025-06-04 15:11:12,135 | INFO     | . payload setup = 6 s
[2025-06-04 11:11:33] 2025-06-04 15:11:12,135 | INFO     | . stage-in = 0 s
[2025-06-04 11:11:33] 2025-06-04 15:11:12,135 | INFO     | . payload execution = 3587 s
[2025-06-04 11:11:33] 2025-06-04 15:11:12,135 | INFO     | . stage-out = 1 s
[2025-06-04 11:11:33] 2025-06-04 15:11:12,135 | INFO     | . log creation = 0 s
[2025-06-04 11:11:33] 2025-06-04 15:11:12,135 | INFO     | ..............................
[2025-06-04 11:11:33] 2025-06-04 15:11:12,210 | INFO     | 
[2025-06-04 11:11:33] 2025-06-04 15:11:12,211 | INFO     | job summary report
[2025-06-04 11:11:33] 2025-06-04 15:11:12,211 | INFO     | --------------------------------------------------
[2025-06-04 11:11:33] 2025-06-04 15:11:12,211 | INFO     | PanDA job id: 6678312523
[2025-06-04 11:11:33] 2025-06-04 15:11:12,211 | INFO     | task id: 45006595
[2025-06-04 11:11:33] 2025-06-04 15:11:12,211 | INFO     | errors: (none)
[2025-06-04 11:11:33] 2025-06-04 15:11:12,211 | INFO     | status: LOG_TRANSFER = DONE 
[2025-06-04 11:11:33] 2025-06-04 15:11:12,211 | INFO     | pilot state: finished 
[2025-06-04 11:11:33] 2025-06-04 15:11:12,211 | INFO     | transexitcode: 0
[2025-06-04 11:11:33] 2025-06-04 15:11:12,211 | INFO     | exeerrorcode: 0
[2025-06-04 11:11:33] 2025-06-04 15:11:12,211 | INFO     | exeerrordiag: 
[2025-06-04 11:11:33] 2025-06-04 15:11:12,211 | INFO     | exitcode: 0
[2025-06-04 11:11:33] 2025-06-04 15:11:12,211 | INFO     | exitmsg: OK
[2025-06-04 11:11:33] 2025-06-04 15:11:12,212 | INFO     | cpuconsumptiontime: 23813 s
[2025-06-04 11:11:33] 2025-06-04 15:11:12,212 | INFO     | nevents: 400
[2025-06-04 11:11:33] 2025-06-04 15:11:12,212 | INFO     | neventsw: 0
[2025-06-04 11:11:33] 2025-06-04 15:11:12,212 | INFO     | pid: 2147743
[2025-06-04 11:11:33] 2025-06-04 15:11:12,212 | INFO     | pgrp: 2147743
[2025-06-04 11:11:33] 2025-06-04 15:11:12,212 | INFO     | corecount: 8
[2025-06-04 11:11:33] 2025-06-04 15:11:12,212 | INFO     | event service: False
[2025-06-04 11:11:33] 2025-06-04 15:11:12,212 | INFO     | sizes: {0: 2397290, 4: 2397496, 11: 2397524, 3597: 2423261, 3599: 2432258, 3608: 2432372}
[2025-06-04 11:11:33] 2025-06-04 15:11:12,212 | INFO     | --------------------------------------------------
[2025-06-04 11:11:33] 2025-06-04 15:11:12,212 | INFO     | 
[2025-06-04 11:11:33] 2025-06-04 15:11:12,212 | INFO     | executing command: ls -lF /tmp/boinchome/slots/1
[2025-06-04 11:11:33] 2025-06-04 15:11:12,234 | INFO     | queue jobs had 0 job(s) [purged]
[2025-06-04 11:11:33] 2025-06-04 15:11:12,234 | INFO     | queue payloads had 0 job(s) [purged]
[2025-06-04 11:11:33] 2025-06-04 15:11:12,234 | INFO     | queue data_in had 0 job(s) [purged]
[2025-06-04 11:11:33] 2025-06-04 15:11:12,234 | INFO     | queue data_out had 0 job(s) [purged]
[2025-06-04 11:11:33] 2025-06-04 15:11:12,234 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-06-04 11:11:33] 2025-06-04 15:11:12,234 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-06-04 11:11:33] 2025-06-04 15:11:12,234 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-06-04 11:11:33] 2025-06-04 15:11:12,234 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-06-04 11:11:33] 2025-06-04 15:11:12,234 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-06-04 11:11:33] 2025-06-04 15:11:12,234 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-06-04 11:11:33] 2025-06-04 15:11:12,235 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-06-04 11:11:33] 2025-06-04 15:11:12,235 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-06-04 11:11:33] 2025-06-04 15:11:12,235 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-06-04 11:11:33] 2025-06-04 15:11:12,235 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-06-04 11:11:33] 2025-06-04 15:11:12,235 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-06-04 11:11:33] 2025-06-04 15:11:12,235 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-06-04 11:11:33] 2025-06-04 15:11:12,235 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-06-04 11:11:33] 2025-06-04 15:11:12,235 | INFO     | queue completed_jobids has 1 job(s)
[2025-06-04 11:11:33] 2025-06-04 15:11:12,235 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-06-04 11:11:33] 2025-06-04 15:11:12,235 | INFO     | queue messages had 0 job(s) [purged]
[2025-06-04 11:11:33] 2025-06-04 15:11:12,235 | INFO     | job 6678312523 has completed (purged errors)
[2025-06-04 11:11:33] 2025-06-04 15:11:12,235 | INFO     | overall cleanup function is called
[2025-06-04 11:11:33] 2025-06-04 15:11:13,243 | INFO     | --- collectZombieJob: --- 10, [2147743]
[2025-06-04 11:11:33] 2025-06-04 15:11:13,243 | INFO     | zombie collector waiting for pid 2147743
[2025-06-04 11:11:33] 2025-06-04 15:11:13,244 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-06-04 11:11:33] 2025-06-04 15:11:13,244 | INFO     | collected zombie processes
[2025-06-04 11:11:33] 2025-06-04 15:11:13,244 | INFO     | will attempt to kill all subprocesses of pid=2147743
[2025-06-04 11:11:33] 2025-06-04 15:11:13,542 | INFO     | process IDs to be killed: [2147743] (in reverse order)
[2025-06-04 11:11:33] 2025-06-04 15:11:13,659 | WARNING  | found no corresponding commands to process id(s)
[2025-06-04 11:11:33] 2025-06-04 15:11:13,659 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-06-04 11:11:33] 2025-06-04 15:11:13,674 | INFO     | did not find any defunct processes belonging to 2147743
[2025-06-04 11:11:33] 2025-06-04 15:11:13,687 | INFO     | did not find any defunct processes belonging to 2147743
[2025-06-04 11:11:33] 2025-06-04 15:11:13,688 | INFO     | ready for new job
[2025-06-04 11:11:33] 2025-06-04 15:11:13,688 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-06-04 11:11:33] 2025-06-04 15:11:13,689 | INFO     | **************************************
[2025-06-04 11:11:33] 2025-06-04 15:11:13,689 | INFO     | ***  PanDA Pilot version 3.10.2.2  ***
[2025-06-04 11:11:33] 2025-06-04 15:11:13,689 | INFO     | **************************************
[2025-06-04 11:11:33] 2025-06-04 15:11:13,689 | INFO     | 
[2025-06-04 11:11:33] 2025-06-04 15:11:13,706 | INFO     | architecture information:
[2025-06-04 11:11:33] 2025-06-04 15:11:13,707 | INFO     | executing command: cat /etc/os-release
[2025-06-04 11:11:33] 2025-06-04 15:11:13,726 | INFO     | cat /etc/os-release:
[2025-06-04 11:11:33] NAME="CentOS Linux"
[2025-06-04 11:11:33] VERSION="7 (Core)"
[2025-06-04 11:11:33] ID="centos"
[2025-06-04 11:11:33] ID_LIKE="rhel fedora"
[2025-06-04 11:11:33] VERSION_ID="7"
[2025-06-04 11:11:33] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-06-04 11:11:33] ANSI_COLOR="0;31"
[2025-06-04 11:11:33] CPE_NAME="cpe:/o:centos:centos:7"
[2025-06-04 11:11:33] HOME_URL="https://www.centos.org/"
[2025-06-04 11:11:33] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-06-04 11:11:33] 
[2025-06-04 11:11:33] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-06-04 11:11:33] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-06-04 11:11:33] REDHAT_SUPPORT_PRODUCT="centos"
[2025-06-04 11:11:33] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-06-04 11:11:33] 
[2025-06-04 11:11:33] 2025-06-04 15:11:13,727 | INFO     | **************************************
[2025-06-04 11:11:33] 2025-06-04 15:11:14,230 | INFO     | executing command: df -mP /tmp/boinchome/slots/1
[2025-06-04 11:11:33] 2025-06-04 15:11:14,249 | INFO     | sufficient remaining disk space (86044049408 B)
[2025-06-04 11:11:33] 2025-06-04 15:11:14,250 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-06-04 11:11:33] 2025-06-04 15:11:14,251 | INFO     | current server update state: UPDATING_FINAL
[2025-06-04 11:11:33] 2025-06-04 15:11:14,251 | INFO     | update_server=False
[2025-06-04 11:11:33] 2025-06-04 15:11:14,251 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-06-04 11:11:33] 2025-06-04 15:11:14,251 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-06-04 11:11:33] 2025-06-04 15:11:14,252 | WARNING  | aborting monitor loop since graceful_stop has been set (timing out remaining threads)
[2025-06-04 11:11:33] 2025-06-04 15:11:14,252 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-06-04 11:11:33] 2025-06-04 15:11:14,252 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-06-04 11:11:33] 2025-06-04 15:11:14,252 | INFO     | found 0 job(s) in 20 queues
[2025-06-04 11:11:33] 2025-06-04 15:11:14,253 | INFO     | aborting loop
[2025-06-04 11:11:33] 2025-06-04 15:11:14,253 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-06-04 11:11:33] 2025-06-04 15:11:14,253 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-06-04 11:11:33] 2025-06-04 15:11:14,710 | INFO     | all job control threads have been joined
[2025-06-04 11:11:33] 2025-06-04 15:11:15,011 | INFO     | all data control threads have been joined
[2025-06-04 11:11:33] 2025-06-04 15:11:15,256 | INFO     | [job] retrieve thread has finished
[2025-06-04 11:11:33] 2025-06-04 15:11:15,258 | INFO     | [job] job monitor thread has finished
[2025-06-04 11:11:33] 2025-06-04 15:11:15,526 | INFO     | all payload control threads have been joined
[2025-06-04 11:11:33] 2025-06-04 15:11:15,715 | INFO     | [job] control thread has finished
[2025-06-04 11:11:33] 2025-06-04 15:11:15,834 | INFO     | [payload] execute_payloads thread has finished
[2025-06-04 11:11:33] 2025-06-04 15:11:15,840 | INFO     | [job] validate thread has finished
[2025-06-04 11:11:33] 2025-06-04 15:11:16,017 | INFO     | [data] control thread has finished
[2025-06-04 11:11:33] 2025-06-04 15:11:16,020 | INFO     | [payload] failed_post thread has finished
[2025-06-04 11:11:33] 2025-06-04 15:11:16,181 | INFO     | [data] copytool_in thread has finished
[2025-06-04 11:11:33] 2025-06-04 15:11:16,230 | INFO     | [payload] validate_pre thread has finished
[2025-06-04 11:11:33] 2025-06-04 15:11:16,241 | INFO     | [job] create_data_payload thread has finished
[2025-06-04 11:11:33] 2025-06-04 15:11:16,257 | INFO     | [data] copytool_out thread has finished
[2025-06-04 11:11:33] 2025-06-04 15:11:16,533 | INFO     | [payload] control thread has finished
[2025-06-04 11:11:33] 2025-06-04 15:11:16,800 | INFO     | [payload] validate_post thread has finished
[2025-06-04 11:11:33] 2025-06-04 15:11:17,221 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-06-04 11:11:33] 2025-06-04 15:11:18,222 | INFO     | [job] queue monitor thread has finished
[2025-06-04 11:11:33] 2025-06-04 15:11:18,254 | INFO     | [data] queue_monitor thread has finished
[2025-06-04 11:11:33] 2025-06-04 15:11:24,690 | INFO     | job.realtimelogging is not enabled
[2025-06-04 11:11:33] 2025-06-04 15:11:25,695 | INFO     | [payload] run_realtimelog thread has finished
[2025-06-04 11:11:33] 2025-06-04 15:11:27,788 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140343767578432)>', '<ExcThread(monitor, started 140343131490048)>']
[2025-06-04 11:11:33] 2025-06-04 15:11:28,317 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-06-04 11:11:33] 2025-06-04 15:11:28,318 | INFO     | [monitor] control thread has ended
[2025-06-04 11:11:33] 2025-06-04 15:11:32,814 | INFO     | all workflow threads have been joined
[2025-06-04 11:11:33] 2025-06-04 15:11:32,814 | INFO     | end of generic workflow (traces error code: 0)
[2025-06-04 11:11:33] 2025-06-04 15:11:32,814 | INFO     | traces error code: 0
[2025-06-04 11:11:33] 2025-06-04 15:11:32,814 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-06-04 11:11:33] 2025-06-04 15:11:32,908 [wrapper] ==== pilot stdout END ====
[2025-06-04 11:11:33] 2025-06-04 15:11:32,912 [wrapper] ==== wrapper stdout RESUME ====
[2025-06-04 11:11:33] 2025-06-04 15:11:32,915 [wrapper] pilotpid: 2139419
[2025-06-04 11:11:33] 2025-06-04 15:11:32,918 [wrapper] Pilot exit status: 0
[2025-06-04 11:11:33] 2025-06-04 15:11:32,931 [wrapper] pandaids: 6678312523
[2025-06-04 11:11:33] 2025-06-04 15:11:33,016 [wrapper] cleanup supervisor_pilot 2298063 2139420
[2025-06-04 11:11:33] 2025-06-04 15:11:33,020 [wrapper] Test setup, not cleaning
[2025-06-04 11:11:33] 2025-06-04 15:11:33,023 [wrapper] apfmon messages muted
[2025-06-04 11:11:33] 2025-06-04 15:11:33,027 [wrapper] ==== wrapper stdout END ====
[2025-06-04 11:11:33] 2025-06-04 15:11:33,030 [wrapper] ==== wrapper stderr END ====
[2025-06-04 11:11:33]  *** Error codes and diagnostics ***
[2025-06-04 11:11:33]     "exeErrorCode": 0,
[2025-06-04 11:11:33]     "exeErrorDiag": "",
[2025-06-04 11:11:33]     "pilotErrorCode": 0,
[2025-06-04 11:11:33]     "pilotErrorDiag": "",
[2025-06-04 11:11:33]  *** Listing of results directory ***
[2025-06-04 11:11:33] total 389380
[2025-06-04 11:11:33] -rw-r--r--. 1 boincer umatlas    495897 Jun  4 00:04 pilot3.tar.gz
[2025-06-04 11:11:33] -rwx------. 1 boincer umatlas     37140 Jun  4 00:07 runpilot2-wrapper.sh
[2025-06-04 11:11:33] -rw-r--r--. 1 boincer umatlas      5111 Jun  4 00:07 queuedata.json
[2025-06-04 11:11:33] -rw-r--r--. 1 boincer umatlas       100 Jun  4 10:10 wrapper_26015_x86_64-pc-linux-gnu
[2025-06-04 11:11:33] -rwxr-xr-x. 1 boincer umatlas      7986 Jun  4 10:10 run_atlas
[2025-06-04 11:11:33] -rw-r--r--. 1 boincer umatlas       105 Jun  4 10:10 job.xml
[2025-06-04 11:11:33] -rw-r--r--. 2 boincer umatlas 213294697 Jun  4 10:10 EVNT.45006593._000618.pool.root.1
[2025-06-04 11:11:33] -rw-r--r--. 2 boincer umatlas     15093 Jun  4 10:10 start_atlas.sh
[2025-06-04 11:11:33] drwxrwx--x. 2 boincer umatlas      4096 Jun  4 10:10 shared
[2025-06-04 11:11:33] -rw-r--r--. 2 boincer umatlas    508887 Jun  4 10:10 input.tar.gz
[2025-06-04 11:11:33] -rw-r--r--. 1 boincer umatlas         0 Jun  4 10:10 boinc_lockfile
[2025-06-04 11:11:33] -rw-r--r--. 1 boincer umatlas      2524 Jun  4 10:10 pandaJob.out
[2025-06-04 11:11:33] -rw-------. 1 boincer umatlas    986819 Jun  4 10:10 agis_schedconf.cvmfs.json
[2025-06-04 11:11:33] -rw-------. 1 boincer umatlas   1598969 Jun  4 10:10 agis_ddmendpoints.agis.ALL.json
[2025-06-04 11:11:33] drwx------. 4 boincer umatlas      4096 Jun  4 10:10 pilot3
[2025-06-04 11:11:33] -rw-r--r--. 1 boincer umatlas      6897 Jun  4 11:09 init_data.xml
[2025-06-04 11:11:33] -rw-------. 1 boincer umatlas 180293352 Jun  4 11:10 HITS.45006595._051969.pool.root.1
[2025-06-04 11:11:33] -rw-r--r--. 1 boincer umatlas       529 Jun  4 11:10 boinc_task_state.xml
[2025-06-04 11:11:33] -rw-------. 1 boincer umatlas        95 Jun  4 11:10 pilot_heartbeat.json
[2025-06-04 11:11:33] -rw-------. 1 boincer umatlas      1022 Jun  4 11:10 memory_monitor_summary.json
[2025-06-04 11:11:33] -rw-------. 1 boincer umatlas    284218 Jun  4 11:11 log.45006595._051969.job.log.tgz.1
[2025-06-04 11:11:33] -rw-------. 1 boincer umatlas      7677 Jun  4 11:11 heartbeat.json
[2025-06-04 11:11:33] -rw-r--r--. 1 boincer umatlas      8192 Jun  4 11:11 boinc_mmap_file
[2025-06-04 11:11:33] -rw-r--r--. 1 boincer umatlas        27 Jun  4 11:11 wrapper_checkpoint.txt
[2025-06-04 11:11:33] -rw-------. 1 boincer umatlas      4548 Jun  4 11:11 pilotlog.txt
[2025-06-04 11:11:33] -rw-------. 1 boincer umatlas    368547 Jun  4 11:11 log.45006595._051969.job.log.1
[2025-06-04 11:11:33] -rw-------. 1 boincer umatlas       357 Jun  4 11:11 output.list
[2025-06-04 11:11:33] -rw-r--r--. 1 boincer umatlas       620 Jun  4 11:11 runtime_log
[2025-06-04 11:11:33] -rw-------. 1 boincer umatlas    675840 Jun  4 11:11 result.tar.gz
[2025-06-04 11:11:33] -rw-r--r--. 1 boincer umatlas      8659 Jun  4 11:11 runtime_log.err
[2025-06-04 11:11:33] -rw-------. 1 boincer umatlas       651 Jun  4 11:11 nWCODmiaug7nsSi4ap6QjLDmwznN0nGgGQJmUXzaDmC7mKDmYUlO6m.diag
[2025-06-04 11:11:33] -rw-r--r--. 1 boincer umatlas     21634 Jun  4 11:11 stderr.txt
[2025-06-04 11:11:33] HITS file was successfully produced:
[2025-06-04 11:11:33] -rw-------. 1 boincer umatlas 180293352 Jun  4 11:10 shared/HITS.pool.root.1
[2025-06-04 11:11:33]  *** Contents of shared directory: ***
[2025-06-04 11:11:33] total 385548
[2025-06-04 11:11:33] -rw-r--r--. 2 boincer umatlas 213294697 Jun  4 10:10 ATLAS.root_0
[2025-06-04 11:11:33] -rw-r--r--. 2 boincer umatlas     15093 Jun  4 10:10 start_atlas.sh
[2025-06-04 11:11:33] -rw-r--r--. 2 boincer umatlas    508887 Jun  4 10:10 input.tar.gz
[2025-06-04 11:11:33] -rw-------. 1 boincer umatlas 180293352 Jun  4 11:10 HITS.pool.root.1
[2025-06-04 11:11:33] -rw-------. 1 boincer umatlas    675840 Jun  4 11:11 result.tar.gz
11:11:34 (2135759): run_atlas exited; CPU time 23840.435030
11:11:34 (2135759): called boinc_finish(0)

</stderr_txt>
]]>

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