Stderr output

<core_client_version>7.20.2</core_client_version>
<![CDATA[
<stderr_txt>
20:18:44 (3037793): wrapper (7.7.26015): starting
20:18:44 (3037793): wrapper: running run_atlas (--nthreads 12)
[2025-06-04 20:18:44] Arguments: --nthreads 12
[2025-06-04 20:18:44] Threads: 12
[2025-06-04 20:18:44] Checking for CVMFS
[2025-06-04 20:18:44] Probing /cvmfs/atlas.cern.ch... OK
[2025-06-04 20:18:44] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-06-04 20:18:44] Running cvmfs_config stat atlas.cern.ch
[2025-06-04 20:18:44] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-06-04 20:18:44] 2.12.7.0 1574182 2835 89688 146791 1 55 2969101 4097025 0 130560 0 3177099 99.993 683256 7890 http://cvmfs-stratum-one.cern.ch/cvmfs/atlas.cern.ch http://188.184.28.244:3128 1
[2025-06-04 20:18:44] CVMFS is ok
[2025-06-04 20:18:44] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-06-04 20:18:44] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2025-06-04 20:18:44] Further information can be found at the LHC@home message board.
[2025-06-04 20:18:44] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-06-04 20:18:44] Checking for apptainer binary...
[2025-06-04 20:18:44] which: no apptainer in (/usr/local/sbin:/usr/local/bin:/usr/sbin:/usr/bin)
[2025-06-04 20:18:44] apptainer is not installed, using version from CVMFS
[2025-06-04 20:18:44] Checking apptainer works with /cvmfs/atlas.cern.ch/repo/containers/sw/apptainer/x86_64-el7/current/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-06-04 20:18:44] pckelar6.cern.ch
[2025-06-04 20:18:44] apptainer works
[2025-06-04 20:18:44] Set ATHENA_PROC_NUMBER=12
[2025-06-04 20:18:44] Set ATHENA_CORE_NUMBER=12
[2025-06-04 20:18:44] Starting ATLAS job with PandaID=6666762894
[2025-06-04 20:18:44] Running command: /cvmfs/atlas.cern.ch/repo/containers/sw/apptainer/x86_64-el7/current/bin/apptainer exec -B /cvmfs,/var/lib/boinc/slots/0 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-06-04 21:44:20]  *** The last 200 lines of the pilot log: ***
[2025-06-04 21:44:20]  protocols=[{'endpoint': 'davs://dav.ndgf.org:443', 'flavour': 'WEBDAV', 'id': 331, 'path': '/atlas/disk/atlasdatadisk/rucio/'}]
[2025-06-04 21:44:20]  replicas=None
[2025-06-04 21:44:20]  scope=mc23_13p6TeV
[2025-06-04 21:44:20]  status=None
[2025-06-04 21:44:20]  status_code=0
[2025-06-04 21:44:20]  storage_token=
[2025-06-04 21:44:20]  surl=/var/lib/boinc/slots/0/PanDA_Pilot-6666762894/log.44871837._061950.job.log.tgz.1
[2025-06-04 21:44:20]  turl=davs://dav.ndgf.org:443/atlas/disk/atlasdatadisk/rucio/mc23_13p6TeV/fb/ed/log.44871837._061950.job.log.tgz.1
[2025-06-04 21:44:20]  workdir=None
[2025-06-04 21:44:20] ]
[2025-06-04 21:44:20] 2025-06-04 19:43:54,441 | INFO     | transferring file log.44871837._061950.job.log.tgz.1 from /var/lib/boinc/slots/0/PanDA_Pilot-6666762894/log.44871837._061950.job.log.tgz.1 to /var/lib/boinc/slots/
[2025-06-04 21:44:20] 2025-06-04 19:43:54,441 | INFO     | executing command: /usr/bin/env mv /var/lib/boinc/slots/0/PanDA_Pilot-6666762894/log.44871837._061950.job.log.tgz.1 /var/lib/boinc/slots/0/log.44871837._061950.job
[2025-06-04 21:44:20] 2025-06-04 19:43:54,454 | INFO     | adding to output.list: log.44871837._061950.job.log.tgz.1 davs://dav.ndgf.org:443/atlas/disk/atlasdatadisk/rucio/mc23_13p6TeV/fb/ed/log.44871837._061950.job.log.tg
[2025-06-04 21:44:20] 2025-06-04 19:43:54,455 | INFO     | alt stage-out settings: ['pl', 'write_lan', 'w', 'default'], allow_altstageout=False, remain_files=0, has_altstorage=True
[2025-06-04 21:44:20] 2025-06-04 19:43:54,455 | INFO     | summary of transferred files:
[2025-06-04 21:44:20] 2025-06-04 19:43:54,455 | INFO     |  -- lfn=log.44871837._061950.job.log.tgz.1, status_code=0, status=transferred
[2025-06-04 21:44:20] 2025-06-04 19:43:54,455 | INFO     | stage-out finished correctly
[2025-06-04 21:44:20] 2025-06-04 19:43:55,319 | INFO     | PID=3041459 has CPU usage=4.6% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i P
[2025-06-04 21:44:20] 2025-06-04 19:43:56,434 | INFO     | finished stage-out for finished payload, adding job to finished_jobs queue
[2025-06-04 21:44:20] 2025-06-04 19:43:56,575 | WARNING  | process 3048714 can no longer be monitored (due to stat problems) - aborting
[2025-06-04 21:44:20] 2025-06-04 19:43:56,575 | INFO     | using path: /var/lib/boinc/slots/0/PanDA_Pilot-6666762894/memory_monitor_summary.json (trf name=prmon)
[2025-06-04 21:44:20] 2025-06-04 19:43:56,649 | INFO     | number of running child processes to parent process 3048714: 1
[2025-06-04 21:44:20] 2025-06-04 19:43:56,649 | INFO     | maximum number of monitored processes: 6
[2025-06-04 21:44:20] 2025-06-04 19:43:58,126 | INFO     | job 6666762894 has state=finished
[2025-06-04 21:44:20] 2025-06-04 19:43:58,126 | INFO     | preparing for final server update for job 6666762894 in state='finished'
[2025-06-04 21:44:20] 2025-06-04 19:43:58,126 | INFO     | this job has now completed (state=finished)
[2025-06-04 21:44:20] 2025-06-04 19:43:58,126 | INFO     | pilot will not update the server (heartbeat message will be written to file)
[2025-06-04 21:44:20] 2025-06-04 19:43:58,126 | INFO     | log transfer has been attempted: DONE
[2025-06-04 21:44:20] 2025-06-04 19:43:58,127 | INFO     | job 6666762894 has finished - writing final server update
[2025-06-04 21:44:20] 2025-06-04 19:43:58,127 | INFO     | total number of processed events: 400 (read)
[2025-06-04 21:44:20] 2025-06-04 19:43:58,128 | INFO     | executing command: lscpu
[2025-06-04 21:44:20] 2025-06-04 19:43:58,149 | INFO     | executing command: export ATLAS_LOCAL_ROOT_BASE=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase;source ${ATLAS_LOCAL_ROOT_BASE}/user/atlasLocalSetup.sh --quiet;lsetup
[2025-06-04 21:44:20] 2025-06-04 19:43:59,152 | INFO     | monitor loop #380: job 0:6666762894 is in state 'finished'
[2025-06-04 21:44:20] 2025-06-04 19:43:59,152 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-06-04 21:44:20] 2025-06-04 19:44:00,330 | INFO     | 5110s have passed since pilot start - server update state is 'UPDATING_FINAL'
[2025-06-04 21:44:20] 2025-06-04 19:44:01,655 | INFO     | monitor loop #381: job 0:6666762894 is in state 'finished'
[2025-06-04 21:44:20] 2025-06-04 19:44:01,655 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-06-04 21:44:20] 2025-06-04 19:44:02,032 | INFO     | CPU arch script returned: x86-64-v2
[2025-06-04 21:44:20] 2025-06-04 19:44:02,033 | INFO     | using path: /var/lib/boinc/slots/0/PanDA_Pilot-6666762894/memory_monitor_summary.json (trf name=prmon)
[2025-06-04 21:44:20] 2025-06-04 19:44:02,033 | INFO     | extracted standard info from prmon json
[2025-06-04 21:44:20] 2025-06-04 19:44:02,033 | INFO     | extracted standard memory fields from prmon json
[2025-06-04 21:44:20] 2025-06-04 19:44:02,033 | WARNING  | GPU info not found in prmon json: 'gpu'
[2025-06-04 21:44:20] 2025-06-04 19:44:02,034 | WARNING  | format EVNTtoHITS has no such key: dbData
[2025-06-04 21:44:20] 2025-06-04 19:44:02,034 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2025-06-04 21:44:20] 2025-06-04 19:44:02,035 | INFO     | fitting pss+swap vs Time
[2025-06-04 21:44:20] 2025-06-04 19:44:02,035 | INFO     | sum of square deviations: 141539398.0
[2025-06-04 21:44:20] 2025-06-04 19:44:02,036 | INFO     | sum of deviations: -15097006876.0
[2025-06-04 21:44:20] 2025-06-04 19:44:02,036 | INFO     | mean x: 1749063776.0
[2025-06-04 21:44:20] 2025-06-04 19:44:02,036 | INFO     | mean y: 3021317.1948051946
[2025-06-04 21:44:20] 2025-06-04 19:44:02,036 | INFO     | -- intersect: 186563288111.8474
[2025-06-04 21:44:20] 2025-06-04 19:44:02,036 | INFO     | intersect: 186563288111.8474
[2025-06-04 21:44:20] 2025-06-04 19:44:02,036 | INFO     | chi2: 0.12618712853603092
[2025-06-04 21:44:20] 2025-06-04 19:44:02,036 | INFO     | -- intersect: 186563288111.8474
[2025-06-04 21:44:20] 2025-06-04 19:44:02,037 | INFO     | current memory leak: -106.66 B/s (using 77 data points, chi2=0.13)
[2025-06-04 21:44:20] 2025-06-04 19:44:02,037 | INFO     | ..............................
[2025-06-04 21:44:20] 2025-06-04 19:44:02,037 | INFO     | . Timing measurements:
[2025-06-04 21:44:20] 2025-06-04 19:44:02,037 | INFO     | . get job = 0 s
[2025-06-04 21:44:20] 2025-06-04 19:44:02,037 | INFO     | . initial setup = 1 s
[2025-06-04 21:44:20] 2025-06-04 19:44:02,037 | INFO     | . payload setup = 5 s
[2025-06-04 21:44:20] 2025-06-04 19:44:02,037 | INFO     | . stage-in = 0 s
[2025-06-04 21:44:20] 2025-06-04 19:44:02,038 | INFO     | . payload execution = 5080 s
[2025-06-04 21:44:20] 2025-06-04 19:44:02,038 | INFO     | . stage-out = 0 s
[2025-06-04 21:44:20] 2025-06-04 19:44:02,038 | INFO     | . log creation = 0 s
[2025-06-04 21:44:20] 2025-06-04 19:44:02,038 | INFO     | ..............................
[2025-06-04 21:44:20] 2025-06-04 19:44:02,106 | INFO     | 
[2025-06-04 21:44:20] 2025-06-04 19:44:02,107 | INFO     | job summary report
[2025-06-04 21:44:20] 2025-06-04 19:44:02,107 | INFO     | --------------------------------------------------
[2025-06-04 21:44:20] 2025-06-04 19:44:02,107 | INFO     | PanDA job id: 6666762894
[2025-06-04 21:44:20] 2025-06-04 19:44:02,107 | INFO     | task id: 44871837
[2025-06-04 21:44:20] 2025-06-04 19:44:02,107 | INFO     | errors: (none)
[2025-06-04 21:44:20] 2025-06-04 19:44:02,107 | INFO     | status: LOG_TRANSFER = DONE 
[2025-06-04 21:44:20] 2025-06-04 19:44:02,107 | INFO     | pilot state: finished 
[2025-06-04 21:44:20] 2025-06-04 19:44:02,107 | INFO     | transexitcode: 0
[2025-06-04 21:44:20] 2025-06-04 19:44:02,107 | INFO     | exeerrorcode: 0
[2025-06-04 21:44:20] 2025-06-04 19:44:02,107 | INFO     | exeerrordiag: 
[2025-06-04 21:44:20] 2025-06-04 19:44:02,107 | INFO     | exitcode: 0
[2025-06-04 21:44:20] 2025-06-04 19:44:02,107 | INFO     | exitmsg: OK
[2025-06-04 21:44:20] 2025-06-04 19:44:02,108 | INFO     | cpuconsumptiontime: 55967 s
[2025-06-04 21:44:20] 2025-06-04 19:44:02,108 | INFO     | nevents: 400
[2025-06-04 21:44:20] 2025-06-04 19:44:02,108 | INFO     | neventsw: 0
[2025-06-04 21:44:20] 2025-06-04 19:44:02,108 | INFO     | pid: 3048714
[2025-06-04 21:44:20] 2025-06-04 19:44:02,108 | INFO     | pgrp: 3048714
[2025-06-04 21:44:20] 2025-06-04 19:44:02,108 | INFO     | corecount: 12
[2025-06-04 21:44:20] 2025-06-04 19:44:02,108 | INFO     | event service: False
[2025-06-04 21:44:20] 2025-06-04 19:44:02,108 | INFO     | sizes: {0: 2397392, 3: 2397598, 11: 2397626, 5088: 2423908, 5089: 2432849, 5091: 2432905, 5097: 2433203}
[2025-06-04 21:44:20] 2025-06-04 19:44:02,108 | INFO     | --------------------------------------------------
[2025-06-04 21:44:20] 2025-06-04 19:44:02,108 | INFO     | 
[2025-06-04 21:44:20] 2025-06-04 19:44:02,108 | INFO     | executing command: ls -lF /var/lib/boinc/slots/0
[2025-06-04 21:44:20] 2025-06-04 19:44:02,127 | INFO     | queue jobs had 0 job(s) [purged]
[2025-06-04 21:44:20] 2025-06-04 19:44:02,127 | INFO     | queue payloads had 0 job(s) [purged]
[2025-06-04 21:44:20] 2025-06-04 19:44:02,127 | INFO     | queue data_in had 0 job(s) [purged]
[2025-06-04 21:44:20] 2025-06-04 19:44:02,127 | INFO     | queue data_out had 0 job(s) [purged]
[2025-06-04 21:44:20] 2025-06-04 19:44:02,127 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-06-04 21:44:20] 2025-06-04 19:44:02,128 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-06-04 21:44:20] 2025-06-04 19:44:02,128 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-06-04 21:44:20] 2025-06-04 19:44:02,128 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-06-04 21:44:20] 2025-06-04 19:44:02,128 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-06-04 21:44:20] 2025-06-04 19:44:02,128 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-06-04 21:44:20] 2025-06-04 19:44:02,128 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-06-04 21:44:20] 2025-06-04 19:44:02,128 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-06-04 21:44:20] 2025-06-04 19:44:02,128 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-06-04 21:44:20] 2025-06-04 19:44:02,128 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-06-04 21:44:20] 2025-06-04 19:44:02,128 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-06-04 21:44:20] 2025-06-04 19:44:02,128 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-06-04 21:44:20] 2025-06-04 19:44:02,129 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-06-04 21:44:20] 2025-06-04 19:44:02,129 | INFO     | queue completed_jobids has 1 job(s)
[2025-06-04 21:44:20] 2025-06-04 19:44:02,129 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-06-04 21:44:20] 2025-06-04 19:44:02,129 | INFO     | queue messages had 0 job(s) [purged]
[2025-06-04 21:44:20] 2025-06-04 19:44:02,129 | INFO     | job 6666762894 has completed (purged errors)
[2025-06-04 21:44:20] 2025-06-04 19:44:02,129 | INFO     | overall cleanup function is called
[2025-06-04 21:44:20] 2025-06-04 19:44:03,136 | INFO     | --- collectZombieJob: --- 10, [3048714]
[2025-06-04 21:44:20] 2025-06-04 19:44:03,136 | INFO     | zombie collector waiting for pid 3048714
[2025-06-04 21:44:20] 2025-06-04 19:44:03,136 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-06-04 21:44:20] 2025-06-04 19:44:03,136 | INFO     | collected zombie processes
[2025-06-04 21:44:20] 2025-06-04 19:44:03,136 | INFO     | will attempt to kill all subprocesses of pid=3048714
[2025-06-04 21:44:20] 2025-06-04 19:44:03,214 | INFO     | process IDs to be killed: [3048714] (in reverse order)
[2025-06-04 21:44:20] 2025-06-04 19:44:03,246 | WARNING  | found no corresponding commands to process id(s)
[2025-06-04 21:44:20] 2025-06-04 19:44:03,247 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-06-04 21:44:20] 2025-06-04 19:44:03,249 | INFO     | did not find any defunct processes belonging to 3048714
[2025-06-04 21:44:20] 2025-06-04 19:44:03,251 | INFO     | did not find any defunct processes belonging to 3048714
[2025-06-04 21:44:20] 2025-06-04 19:44:03,251 | INFO     | ready for new job
[2025-06-04 21:44:20] 2025-06-04 19:44:03,251 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-06-04 21:44:20] 2025-06-04 19:44:03,252 | INFO     | **************************************
[2025-06-04 21:44:20] 2025-06-04 19:44:03,253 | INFO     | ***  PanDA Pilot version 3.10.2.2  ***
[2025-06-04 21:44:20] 2025-06-04 19:44:03,253 | INFO     | **************************************
[2025-06-04 21:44:20] 2025-06-04 19:44:03,253 | INFO     | 
[2025-06-04 21:44:20] 2025-06-04 19:44:03,253 | INFO     | architecture information:
[2025-06-04 21:44:20] 2025-06-04 19:44:03,253 | INFO     | executing command: cat /etc/os-release
[2025-06-04 21:44:20] 2025-06-04 19:44:03,264 | INFO     | cat /etc/os-release:
[2025-06-04 21:44:20] NAME="CentOS Linux"
[2025-06-04 21:44:20] VERSION="7 (Core)"
[2025-06-04 21:44:20] ID="centos"
[2025-06-04 21:44:20] ID_LIKE="rhel fedora"
[2025-06-04 21:44:20] VERSION_ID="7"
[2025-06-04 21:44:20] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-06-04 21:44:20] ANSI_COLOR="0;31"
[2025-06-04 21:44:20] CPE_NAME="cpe:/o:centos:centos:7"
[2025-06-04 21:44:20] HOME_URL="https://www.centos.org/"
[2025-06-04 21:44:20] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-06-04 21:44:20] 
[2025-06-04 21:44:20] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-06-04 21:44:20] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-06-04 21:44:20] REDHAT_SUPPORT_PRODUCT="centos"
[2025-06-04 21:44:20] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-06-04 21:44:20] 
[2025-06-04 21:44:20] 2025-06-04 19:44:03,264 | INFO     | **************************************
[2025-06-04 21:44:20] 2025-06-04 19:44:03,767 | INFO     | executing command: df -mP /var/lib/boinc/slots/0
[2025-06-04 21:44:20] 2025-06-04 19:44:03,779 | INFO     | sufficient remaining disk space (870601195520 B)
[2025-06-04 21:44:20] 2025-06-04 19:44:03,780 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-06-04 21:44:20] 2025-06-04 19:44:03,780 | INFO     | current server update state: UPDATING_FINAL
[2025-06-04 21:44:20] 2025-06-04 19:44:03,780 | INFO     | update_server=False
[2025-06-04 21:44:20] 2025-06-04 19:44:03,780 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-06-04 21:44:20] 2025-06-04 19:44:03,780 | WARNING  | aborting monitor loop since graceful_stop has been set (timing out remaining threads)
[2025-06-04 21:44:20] 2025-06-04 19:44:03,780 | INFO     | found 0 job(s) in 20 queues
[2025-06-04 21:44:20] 2025-06-04 19:44:03,780 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-06-04 21:44:20] 2025-06-04 19:44:03,781 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-06-04 21:44:20] 2025-06-04 19:44:03,781 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-06-04 21:44:20] 2025-06-04 19:44:03,823 | INFO     | all data control threads have been joined
[2025-06-04 21:44:20] 2025-06-04 19:44:03,930 | INFO     | all job control threads have been joined
[2025-06-04 21:44:20] 2025-06-04 19:44:04,158 | WARNING  | job monitor detected an abort_job request (signal=args.signal)
[2025-06-04 21:44:20] 2025-06-04 19:44:04,158 | WARNING  | cannot recover job monitoring - aborting pilot
[2025-06-04 21:44:20] 2025-06-04 19:44:04,158 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-06-04 21:44:20] 2025-06-04 19:44:04,159 | INFO     | will abort loop
[2025-06-04 21:44:20] 2025-06-04 19:44:04,647 | INFO     | all payload control threads have been joined
[2025-06-04 21:44:20] 2025-06-04 19:44:04,785 | INFO     | [job] retrieve thread has finished
[2025-06-04 21:44:20] 2025-06-04 19:44:04,786 | INFO     | [job] queue monitor thread has finished
[2025-06-04 21:44:20] 2025-06-04 19:44:04,798 | INFO     | [data] copytool_in thread has finished
[2025-06-04 21:44:20] 2025-06-04 19:44:04,804 | INFO     | [payload] failed_post thread has finished
[2025-06-04 21:44:20] 2025-06-04 19:44:04,828 | INFO     | [data] control thread has finished
[2025-06-04 21:44:20] 2025-06-04 19:44:04,935 | INFO     | [job] control thread has finished
[2025-06-04 21:44:20] 2025-06-04 19:44:05,036 | INFO     | [payload] validate_pre thread has finished
[2025-06-04 21:44:20] 2025-06-04 19:44:05,037 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-06-04 21:44:20] 2025-06-04 19:44:05,061 | INFO     | [job] create_data_payload thread has finished
[2025-06-04 21:44:20] 2025-06-04 19:44:05,164 | INFO     | [job] job monitor thread has finished
[2025-06-04 21:44:20] 2025-06-04 19:44:05,183 | INFO     | [payload] execute_payloads thread has finished
[2025-06-04 21:44:20] 2025-06-04 19:44:05,652 | INFO     | [payload] control thread has finished
[2025-06-04 21:44:20] 2025-06-04 19:44:05,926 | INFO     | [payload] validate_post thread has finished
[2025-06-04 21:44:20] 2025-06-04 19:44:06,042 | INFO     | [job] validate thread has finished
[2025-06-04 21:44:20] 2025-06-04 19:44:07,008 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-06-04 21:44:20] 2025-06-04 19:44:07,042 | INFO     | [data] copytool_out thread has finished
[2025-06-04 21:44:20] 2025-06-04 19:44:11,014 | INFO     | [data] queue_monitor thread has finished
[2025-06-04 21:44:20] 2025-06-04 19:44:14,111 | INFO     | job.realtimelogging is not enabled
[2025-06-04 21:44:20] 2025-06-04 19:44:15,116 | INFO     | [payload] run_realtimelog thread has finished
[2025-06-04 21:44:20] 2025-06-04 19:44:15,184 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 139639200855872)>', '<ExcThread(monitor, started 139638396131072)>']
[2025-06-04 21:44:20] 2025-06-04 19:44:15,842 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-06-04 21:44:20] 2025-06-04 19:44:15,842 | INFO     | [monitor] control thread has ended
[2025-06-04 21:44:20] 2025-06-04 19:44:20,206 | INFO     | all workflow threads have been joined
[2025-06-04 21:44:20] 2025-06-04 19:44:20,206 | INFO     | end of generic workflow (traces error code: 0)
[2025-06-04 21:44:20] 2025-06-04 19:44:20,206 | INFO     | traces error code: 0
[2025-06-04 21:44:20] 2025-06-04 19:44:20,206 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-06-04 21:44:20] 2025-06-04 19:44:20,290 [wrapper] ==== pilot stdout END ====
[2025-06-04 21:44:20] 2025-06-04 19:44:20,293 [wrapper] ==== wrapper stdout RESUME ====
[2025-06-04 21:44:20] 2025-06-04 19:44:20,295 [wrapper] pilotpid: 3041459
[2025-06-04 21:44:20] 2025-06-04 19:44:20,298 [wrapper] Pilot exit status: 0
[2025-06-04 21:44:20] 2025-06-04 19:44:20,306 [wrapper] pandaids: 6666762894
[2025-06-04 21:44:20] 2025-06-04 19:44:20,326 [wrapper] cleanup supervisor_pilot 3070492 3041460
[2025-06-04 21:44:20] 2025-06-04 19:44:20,328 [wrapper] Test setup, not cleaning
[2025-06-04 21:44:20] 2025-06-04 19:44:20,330 [wrapper] apfmon messages muted
[2025-06-04 21:44:20] 2025-06-04 19:44:20,332 [wrapper] ==== wrapper stdout END ====
[2025-06-04 21:44:20] 2025-06-04 19:44:20,334 [wrapper] ==== wrapper stderr END ====
[2025-06-04 21:44:20]  *** Error codes and diagnostics ***
[2025-06-04 21:44:20]     "exeErrorCode": 0,
[2025-06-04 21:44:20]     "exeErrorDiag": "",
[2025-06-04 21:44:20]     "pilotErrorCode": 0,
[2025-06-04 21:44:20]     "pilotErrorDiag": "",
[2025-06-04 21:44:20]  *** Listing of results directory ***
[2025-06-04 21:44:20] total 419592
[2025-06-04 21:44:20] -rw-r--r--. 1 boinc boinc    495897 May 27 06:09 pilot3.tar.gz
[2025-06-04 21:44:20] -rw-r--r--. 1 boinc boinc      5111 May 27 06:18 queuedata.json
[2025-06-04 21:44:20] -rwx------. 1 boinc boinc     37140 May 27 06:19 runpilot2-wrapper.sh
[2025-06-04 21:44:20] -rw-r--r--. 1 boinc boinc       100 Jun  4 20:18 wrapper_26015_x86_64-pc-linux-gnu
[2025-06-04 21:44:20] -rwxr-xr-x. 1 boinc boinc      7986 Jun  4 20:18 run_atlas
[2025-06-04 21:44:20] -rw-r--r--. 1 boinc boinc       105 Jun  4 20:18 job.xml
[2025-06-04 21:44:20] -rw-r--r--. 1 boinc boinc      6193 Jun  4 20:18 init_data.xml
[2025-06-04 21:44:20] -rw-r--r--. 2 boinc boinc 222834429 Jun  4 20:18 EVNT.44871834._002444.pool.root.1
[2025-06-04 21:44:20] -rw-r--r--. 2 boinc boinc     15093 Jun  4 20:18 start_atlas.sh
[2025-06-04 21:44:20] drwxrwx--x. 2 boinc boinc        68 Jun  4 20:18 shared
[2025-06-04 21:44:20] -rw-r--r--. 2 boinc boinc    508882 Jun  4 20:18 input.tar.gz
[2025-06-04 21:44:20] -rw-r--r--. 1 boinc boinc         0 Jun  4 20:18 boinc_lockfile
[2025-06-04 21:44:20] -rw-r--r--. 1 boinc boinc      2559 Jun  4 20:18 pandaJob.out
[2025-06-04 21:44:20] -rw-------. 1 boinc boinc    990984 Jun  4 20:18 agis_schedconf.cvmfs.json
[2025-06-04 21:44:20] -rw-------. 1 boinc boinc   1598969 Jun  4 20:18 agis_ddmendpoints.agis.ALL.json
[2025-06-04 21:44:20] drwx------. 4 boinc boinc      4096 Jun  4 20:18 pilot3
[2025-06-04 21:44:20] -rw-------. 1 boinc boinc 201316923 Jun  4 21:43 HITS.44871837._061950.pool.root.1
[2025-06-04 21:44:20] -rw-r--r--. 1 boinc boinc       529 Jun  4 21:43 boinc_task_state.xml
[2025-06-04 21:44:20] -rw-------. 1 boinc boinc      1015 Jun  4 21:43 memory_monitor_summary.json
[2025-06-04 21:44:20] -rw-------. 1 boinc boinc    362246 Jun  4 21:43 log.44871837._061950.job.log.tgz.1
[2025-06-04 21:44:20] -rw-------. 1 boinc boinc        95 Jun  4 21:43 pilot_heartbeat.json
[2025-06-04 21:44:20] -rw-------. 1 boinc boinc      7704 Jun  4 21:44 heartbeat.json
[2025-06-04 21:44:20] -rw-r--r--. 1 boinc boinc      8192 Jun  4 21:44 boinc_mmap_file
[2025-06-04 21:44:20] -rw-r--r--. 1 boinc boinc        27 Jun  4 21:44 wrapper_checkpoint.txt
[2025-06-04 21:44:20] -rw-------. 1 boinc boinc      4735 Jun  4 21:44 pilotlog.txt
[2025-06-04 21:44:20] -rw-------. 1 boinc boinc    483687 Jun  4 21:44 log.44871837._061950.job.log.1
[2025-06-04 21:44:20] -rw-------. 1 boinc boinc       357 Jun  4 21:44 output.list
[2025-06-04 21:44:20] -rw-r--r--. 1 boinc boinc       620 Jun  4 21:44 runtime_log
[2025-06-04 21:44:20] -rw-------. 1 boinc boinc    860160 Jun  4 21:44 result.tar.gz
[2025-06-04 21:44:20] -rw-------. 1 boinc boinc       655 Jun  4 21:44 wUxMDmjx0d7nsSi4ap6QjLDmwznN0nGgGQJmUXzaDmLXYKDmisDNLn.diag
[2025-06-04 21:44:20] -rw-r--r--. 1 boinc boinc      8683 Jun  4 21:44 runtime_log.err
[2025-06-04 21:44:20] -rw-r--r--. 1 boinc boinc     22023 Jun  4 21:44 stderr.txt
[2025-06-04 21:44:20] HITS file was successfully produced:
[2025-06-04 21:44:20] -rw-------. 1 boinc boinc 201316923 Jun  4 21:43 shared/HITS.pool.root.1
[2025-06-04 21:44:20]  *** Contents of shared directory: ***
[2025-06-04 21:44:20] total 415568
[2025-06-04 21:44:20] -rw-r--r--. 2 boinc boinc 222834429 Jun  4 20:18 ATLAS.root_0
[2025-06-04 21:44:20] -rw-r--r--. 2 boinc boinc     15093 Jun  4 20:18 start_atlas.sh
[2025-06-04 21:44:20] -rw-r--r--. 2 boinc boinc    508882 Jun  4 20:18 input.tar.gz
[2025-06-04 21:44:20] -rw-------. 1 boinc boinc 201316923 Jun  4 21:43 HITS.pool.root.1
[2025-06-04 21:44:20] -rw-------. 1 boinc boinc    860160 Jun  4 21:44 result.tar.gz
21:44:21 (3037793): run_atlas exited; CPU time 55999.599101
21:44:21 (3037793): called boinc_finish(0)

</stderr_txt>
]]>

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