Stderr output

<core_client_version>8.1.0</core_client_version>
<![CDATA[
<stderr_txt>
10:59:51 (191299): wrapper (7.7.26015): starting
10:59:51 (191299): wrapper: running run_atlas (--nthreads 8)
[2025-06-04 10:59:51] Arguments: --nthreads 8
[2025-06-04 10:59:51] Threads: 8
[2025-06-04 10:59:51] Checking for CVMFS
[2025-06-04 10:59:51] Probing /cvmfs/atlas.cern.ch... OK
[2025-06-04 10:59:51] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-06-04 10:59:51] Running cvmfs_config stat atlas.cern.ch
[2025-06-04 10:59:51] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-06-04 10:59:51] 2.12.6.0 34999 38799 524800 146783 2 352 22271398 32935937 15999 16776704 1 300743742 99.617 298587130 22536 http://cvmfs-s1fnal.opensciencegrid.org:8000/cvmfs/atlas.cern.ch http://192.41.231.237:6081 1
[2025-06-04 10:59:51] CVMFS is ok
[2025-06-04 10:59:51] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-06-04 10:59:51] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2025-06-04 10:59:51] Further information can be found at the LHC@home message board.
[2025-06-04 10:59:51] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-06-04 10:59:51] Checking for apptainer binary...
[2025-06-04 10:59:51] Using apptainer found in PATH at /usr/bin/apptainer
[2025-06-04 10:59:51] Running /usr/bin/apptainer --version
[2025-06-04 10:59:51] apptainer version 1.4.1-1.el9
[2025-06-04 10:59:51] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-06-04 10:59:52] c7-2-16.aglt2.org
[2025-06-04 10:59:52] apptainer works
[2025-06-04 10:59:52] Set ATHENA_PROC_NUMBER=8
[2025-06-04 10:59:52] Set ATHENA_CORE_NUMBER=8
[2025-06-04 10:59:52] Starting ATLAS job with PandaID=6668051293
[2025-06-04 10:59:52] Running command: /usr/bin/apptainer exec -B /cvmfs,/tmp/boinchome/slots/1 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-06-04 11:53:56]  *** The last 200 lines of the pilot log: ***
[2025-06-04 11:53:56]  inputddms=['NDGF-T1_DATADISK', 'CERN-PROD_DATADISK']
[2025-06-04 11:53:56]  is_altstaged=None
[2025-06-04 11:53:56]  is_tar=False
[2025-06-04 11:53:56]  lfn=log.44871837._079356.job.log.tgz.1
[2025-06-04 11:53:56]  mtime=0
[2025-06-04 11:53:56]  protocol_id=None
[2025-06-04 11:53:56]  protocols=[{'endpoint': 'davs://dav.ndgf.org:443', 'flavour': 'WEBDAV', 'id': 331, 'path': '/atlas/disk/atlasdatadisk/rucio/'}]
[2025-06-04 11:53:56]  replicas=None
[2025-06-04 11:53:56]  scope=mc23_13p6TeV
[2025-06-04 11:53:56]  status=None
[2025-06-04 11:53:56]  status_code=0
[2025-06-04 11:53:56]  storage_token=
[2025-06-04 11:53:56]  surl=/tmp/boinchome/slots/1/PanDA_Pilot-6668051293/log.44871837._079356.job.log.tgz.1
[2025-06-04 11:53:56]  turl=davs://dav.ndgf.org:443/atlas/disk/atlasdatadisk/rucio/mc23_13p6TeV/5e/51/log.44871837._079356.job.log.tgz.1
[2025-06-04 11:53:56]  workdir=None
[2025-06-04 11:53:56] ]
[2025-06-04 11:53:56] 2025-06-04 15:53:31,219 | INFO     | transferring file log.44871837._079356.job.log.tgz.1 from /tmp/boinchome/slots/1/PanDA_Pilot-6668051293/log.44871837._079356.job.log.tgz.1 to /tmp/boinchome/slots/
[2025-06-04 11:53:56] 2025-06-04 15:53:31,219 | INFO     | executing command: /usr/bin/env mv /tmp/boinchome/slots/1/PanDA_Pilot-6668051293/log.44871837._079356.job.log.tgz.1 /tmp/boinchome/slots/1/log.44871837._079356.job
[2025-06-04 11:53:56] 2025-06-04 15:53:31,232 | INFO     | adding to output.list: log.44871837._079356.job.log.tgz.1 davs://dav.ndgf.org:443/atlas/disk/atlasdatadisk/rucio/mc23_13p6TeV/5e/51/log.44871837._079356.job.log.tg
[2025-06-04 11:53:56] 2025-06-04 15:53:31,233 | INFO     | alt stage-out settings: ['pl', 'write_lan', 'w', 'default'], allow_altstageout=False, remain_files=0, has_altstorage=True
[2025-06-04 11:53:56] 2025-06-04 15:53:31,233 | INFO     | summary of transferred files:
[2025-06-04 11:53:56] 2025-06-04 15:53:31,233 | INFO     |  -- lfn=log.44871837._079356.job.log.tgz.1, status_code=0, status=transferred
[2025-06-04 11:53:56] 2025-06-04 15:53:31,233 | INFO     | stage-out finished correctly
[2025-06-04 11:53:56] 2025-06-04 15:53:33,459 | INFO     | finished stage-out for finished payload, adding job to finished_jobs queue
[2025-06-04 11:53:56] 2025-06-04 15:53:35,389 | INFO     | job 6668051293 has state=finished
[2025-06-04 11:53:56] 2025-06-04 15:53:35,390 | INFO     | preparing for final server update for job 6668051293 in state='finished'
[2025-06-04 11:53:56] 2025-06-04 15:53:35,390 | INFO     | this job has now completed (state=finished)
[2025-06-04 11:53:56] 2025-06-04 15:53:35,390 | INFO     | pilot will not update the server (heartbeat message will be written to file)
[2025-06-04 11:53:56] 2025-06-04 15:53:35,390 | INFO     | log transfer has been attempted: DONE
[2025-06-04 11:53:56] 2025-06-04 15:53:35,390 | INFO     | job 6668051293 has finished - writing final server update
[2025-06-04 11:53:56] 2025-06-04 15:53:35,390 | INFO     | total number of processed events: 400 (read)
[2025-06-04 11:53:56] 2025-06-04 15:53:35,406 | INFO     | executing command: lscpu
[2025-06-04 11:53:56] 2025-06-04 15:53:35,474 | INFO     | executing command: export ATLAS_LOCAL_ROOT_BASE=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase;source ${ATLAS_LOCAL_ROOT_BASE}/user/atlasLocalSetup.sh --quiet;lsetup
[2025-06-04 11:53:56] 2025-06-04 15:53:37,695 | WARNING  | process 201720 can no longer be monitored (due to stat problems) - aborting
[2025-06-04 11:53:56] 2025-06-04 15:53:37,696 | INFO     | using path: /tmp/boinchome/slots/1/PanDA_Pilot-6668051293/memory_monitor_summary.json (trf name=prmon)
[2025-06-04 11:53:56] 2025-06-04 15:53:37,961 | INFO     | number of running child processes to parent process 201720: 1
[2025-06-04 11:53:56] 2025-06-04 15:53:37,961 | INFO     | maximum number of monitored processes: 6
[2025-06-04 11:53:56] 2025-06-04 15:53:38,079 | INFO     | CPU arch script returned: x86-64-v3
[2025-06-04 11:53:56] 2025-06-04 15:53:38,079 | INFO     | using path: /tmp/boinchome/slots/1/PanDA_Pilot-6668051293/memory_monitor_summary.json (trf name=prmon)
[2025-06-04 11:53:56] 2025-06-04 15:53:38,079 | INFO     | extracted standard info from prmon json
[2025-06-04 11:53:56] 2025-06-04 15:53:38,079 | INFO     | extracted standard memory fields from prmon json
[2025-06-04 11:53:56] 2025-06-04 15:53:38,080 | WARNING  | GPU info not found in prmon json: 'gpu'
[2025-06-04 11:53:56] 2025-06-04 15:53:38,080 | WARNING  | format EVNTtoHITS has no such key: dbData
[2025-06-04 11:53:56] 2025-06-04 15:53:38,080 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2025-06-04 11:53:56] 2025-06-04 15:53:38,080 | INFO     | fitting pss+swap vs Time
[2025-06-04 11:53:56] 2025-06-04 15:53:38,080 | INFO     | sum of square deviations: 30168007.5
[2025-06-04 11:53:56] 2025-06-04 15:53:38,081 | INFO     | sum of deviations: -5002073688.0
[2025-06-04 11:53:56] 2025-06-04 15:53:38,081 | INFO     | mean x: 1749050902.5
[2025-06-04 11:53:56] 2025-06-04 15:53:38,081 | INFO     | mean y: 2347114.0
[2025-06-04 11:53:56] 2025-06-04 15:53:38,081 | INFO     | -- intersect: 290007628316.8737
[2025-06-04 11:53:56] 2025-06-04 15:53:38,081 | INFO     | intersect: 290007628316.8737
[2025-06-04 11:53:56] 2025-06-04 15:53:38,081 | INFO     | chi2: 0.11364613445148555
[2025-06-04 11:53:56] 2025-06-04 15:53:38,081 | INFO     | -- intersect: 290007628316.8737
[2025-06-04 11:53:56] 2025-06-04 15:53:38,081 | INFO     | current memory leak: -165.81 B/s (using 46 data points, chi2=0.11)
[2025-06-04 11:53:56] 2025-06-04 15:53:38,081 | INFO     | ..............................
[2025-06-04 11:53:56] 2025-06-04 15:53:38,081 | INFO     | . Timing measurements:
[2025-06-04 11:53:56] 2025-06-04 15:53:38,081 | INFO     | . get job = 0 s
[2025-06-04 11:53:56] 2025-06-04 15:53:38,081 | INFO     | . initial setup = 2 s
[2025-06-04 11:53:56] 2025-06-04 15:53:38,081 | INFO     | . payload setup = 5 s
[2025-06-04 11:53:56] 2025-06-04 15:53:38,081 | INFO     | . stage-in = 0 s
[2025-06-04 11:53:56] 2025-06-04 15:53:38,081 | INFO     | . payload execution = 3186 s
[2025-06-04 11:53:56] 2025-06-04 15:53:38,081 | INFO     | . stage-out = 0 s
[2025-06-04 11:53:56] 2025-06-04 15:53:38,081 | INFO     | . log creation = 0 s
[2025-06-04 11:53:56] 2025-06-04 15:53:38,081 | INFO     | ..............................
[2025-06-04 11:53:56] 2025-06-04 15:53:38,118 | INFO     | 
[2025-06-04 11:53:56] 2025-06-04 15:53:38,118 | INFO     | job summary report
[2025-06-04 11:53:56] 2025-06-04 15:53:38,118 | INFO     | --------------------------------------------------
[2025-06-04 11:53:56] 2025-06-04 15:53:38,118 | INFO     | PanDA job id: 6668051293
[2025-06-04 11:53:56] 2025-06-04 15:53:38,118 | INFO     | task id: 44871837
[2025-06-04 11:53:56] 2025-06-04 15:53:38,118 | INFO     | errors: (none)
[2025-06-04 11:53:56] 2025-06-04 15:53:38,118 | INFO     | status: LOG_TRANSFER = DONE 
[2025-06-04 11:53:56] 2025-06-04 15:53:38,118 | INFO     | pilot state: finished 
[2025-06-04 11:53:56] 2025-06-04 15:53:38,118 | INFO     | transexitcode: 0
[2025-06-04 11:53:56] 2025-06-04 15:53:38,118 | INFO     | exeerrorcode: 0
[2025-06-04 11:53:56] 2025-06-04 15:53:38,118 | INFO     | exeerrordiag: 
[2025-06-04 11:53:56] 2025-06-04 15:53:38,118 | INFO     | exitcode: 0
[2025-06-04 11:53:56] 2025-06-04 15:53:38,118 | INFO     | exitmsg: OK
[2025-06-04 11:53:56] 2025-06-04 15:53:38,119 | INFO     | cpuconsumptiontime: 22770 s
[2025-06-04 11:53:56] 2025-06-04 15:53:38,119 | INFO     | nevents: 400
[2025-06-04 11:53:56] 2025-06-04 15:53:38,119 | INFO     | neventsw: 0
[2025-06-04 11:53:56] 2025-06-04 15:53:38,119 | INFO     | pid: 201720
[2025-06-04 11:53:56] 2025-06-04 15:53:38,119 | INFO     | pgrp: 201720
[2025-06-04 11:53:56] 2025-06-04 15:53:38,119 | INFO     | corecount: 8
[2025-06-04 11:53:56] 2025-06-04 15:53:38,119 | INFO     | event service: False
[2025-06-04 11:53:56] 2025-06-04 15:53:38,119 | INFO     | sizes: {0: 2397391, 4: 2397597, 11: 2397625, 3195: 2431943, 3197: 2431943, 3202: 2432113}
[2025-06-04 11:53:56] 2025-06-04 15:53:38,119 | INFO     | --------------------------------------------------
[2025-06-04 11:53:56] 2025-06-04 15:53:38,119 | INFO     | 
[2025-06-04 11:53:56] 2025-06-04 15:53:38,119 | INFO     | executing command: ls -lF /tmp/boinchome/slots/1
[2025-06-04 11:53:56] 2025-06-04 15:53:38,132 | INFO     | queue jobs had 0 job(s) [purged]
[2025-06-04 11:53:56] 2025-06-04 15:53:38,132 | INFO     | queue payloads had 0 job(s) [purged]
[2025-06-04 11:53:56] 2025-06-04 15:53:38,132 | INFO     | queue data_in had 0 job(s) [purged]
[2025-06-04 11:53:56] 2025-06-04 15:53:38,132 | INFO     | queue data_out had 0 job(s) [purged]
[2025-06-04 11:53:56] 2025-06-04 15:53:38,133 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-06-04 11:53:56] 2025-06-04 15:53:38,133 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-06-04 11:53:56] 2025-06-04 15:53:38,133 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-06-04 11:53:56] 2025-06-04 15:53:38,133 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-06-04 11:53:56] 2025-06-04 15:53:38,133 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-06-04 11:53:56] 2025-06-04 15:53:38,133 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-06-04 11:53:56] 2025-06-04 15:53:38,133 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-06-04 11:53:56] 2025-06-04 15:53:38,133 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-06-04 11:53:56] 2025-06-04 15:53:38,133 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-06-04 11:53:56] 2025-06-04 15:53:38,133 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-06-04 11:53:56] 2025-06-04 15:53:38,133 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-06-04 11:53:56] 2025-06-04 15:53:38,133 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-06-04 11:53:56] 2025-06-04 15:53:38,133 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-06-04 11:53:56] 2025-06-04 15:53:38,133 | INFO     | queue completed_jobids has 1 job(s)
[2025-06-04 11:53:56] 2025-06-04 15:53:38,133 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-06-04 11:53:56] 2025-06-04 15:53:38,133 | INFO     | queue messages had 0 job(s) [purged]
[2025-06-04 11:53:56] 2025-06-04 15:53:38,133 | INFO     | job 6668051293 has completed (purged errors)
[2025-06-04 11:53:56] 2025-06-04 15:53:38,133 | INFO     | overall cleanup function is called
[2025-06-04 11:53:56] 2025-06-04 15:53:39,140 | INFO     | --- collectZombieJob: --- 10, [201720]
[2025-06-04 11:53:56] 2025-06-04 15:53:39,140 | INFO     | zombie collector waiting for pid 201720
[2025-06-04 11:53:56] 2025-06-04 15:53:39,141 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-06-04 11:53:56] 2025-06-04 15:53:39,141 | INFO     | collected zombie processes
[2025-06-04 11:53:56] 2025-06-04 15:53:39,141 | INFO     | will attempt to kill all subprocesses of pid=201720
[2025-06-04 11:53:56] 2025-06-04 15:53:39,432 | INFO     | process IDs to be killed: [201720] (in reverse order)
[2025-06-04 11:53:56] 2025-06-04 15:53:39,523 | WARNING  | found no corresponding commands to process id(s)
[2025-06-04 11:53:56] 2025-06-04 15:53:39,523 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-06-04 11:53:56] 2025-06-04 15:53:39,537 | INFO     | did not find any defunct processes belonging to 201720
[2025-06-04 11:53:56] 2025-06-04 15:53:39,549 | INFO     | did not find any defunct processes belonging to 201720
[2025-06-04 11:53:56] 2025-06-04 15:53:39,550 | INFO     | ready for new job
[2025-06-04 11:53:56] 2025-06-04 15:53:39,550 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-06-04 11:53:56] 2025-06-04 15:53:39,551 | INFO     | **************************************
[2025-06-04 11:53:56] 2025-06-04 15:53:39,551 | INFO     | ***  PanDA Pilot version 3.10.2.2  ***
[2025-06-04 11:53:56] 2025-06-04 15:53:39,551 | INFO     | **************************************
[2025-06-04 11:53:56] 2025-06-04 15:53:39,551 | INFO     | 
[2025-06-04 11:53:56] 2025-06-04 15:53:39,567 | INFO     | architecture information:
[2025-06-04 11:53:56] 2025-06-04 15:53:39,567 | INFO     | executing command: cat /etc/os-release
[2025-06-04 11:53:56] 2025-06-04 15:53:39,577 | INFO     | cat /etc/os-release:
[2025-06-04 11:53:56] NAME="CentOS Linux"
[2025-06-04 11:53:56] VERSION="7 (Core)"
[2025-06-04 11:53:56] ID="centos"
[2025-06-04 11:53:56] ID_LIKE="rhel fedora"
[2025-06-04 11:53:56] VERSION_ID="7"
[2025-06-04 11:53:56] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-06-04 11:53:56] ANSI_COLOR="0;31"
[2025-06-04 11:53:56] CPE_NAME="cpe:/o:centos:centos:7"
[2025-06-04 11:53:56] HOME_URL="https://www.centos.org/"
[2025-06-04 11:53:56] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-06-04 11:53:56] 
[2025-06-04 11:53:56] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-06-04 11:53:56] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-06-04 11:53:56] REDHAT_SUPPORT_PRODUCT="centos"
[2025-06-04 11:53:56] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-06-04 11:53:56] 
[2025-06-04 11:53:56] 2025-06-04 15:53:39,577 | INFO     | **************************************
[2025-06-04 11:53:56] 2025-06-04 15:53:40,080 | INFO     | executing command: df -mP /tmp/boinchome/slots/1
[2025-06-04 11:53:56] 2025-06-04 15:53:40,094 | INFO     | sufficient remaining disk space (76171706368 B)
[2025-06-04 11:53:56] 2025-06-04 15:53:40,094 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-06-04 11:53:56] 2025-06-04 15:53:40,094 | INFO     | current server update state: UPDATING_FINAL
[2025-06-04 11:53:56] 2025-06-04 15:53:40,094 | INFO     | update_server=False
[2025-06-04 11:53:56] 2025-06-04 15:53:40,094 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-06-04 11:53:56] 2025-06-04 15:53:40,094 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-06-04 11:53:56] 2025-06-04 15:53:40,095 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-06-04 11:53:56] 2025-06-04 15:53:40,095 | WARNING  | aborting monitor loop since graceful_stop has been set (timing out remaining threads)
[2025-06-04 11:53:56] 2025-06-04 15:53:40,095 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-06-04 11:53:56] 2025-06-04 15:53:40,096 | INFO     | found 0 job(s) in 20 queues
[2025-06-04 11:53:56] 2025-06-04 15:53:40,096 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-06-04 11:53:56] 2025-06-04 15:53:40,096 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-06-04 11:53:56] 2025-06-04 15:53:40,464 | WARNING  | job monitor detected an abort_job request (signal=args.signal)
[2025-06-04 11:53:56] 2025-06-04 15:53:40,464 | WARNING  | cannot recover job monitoring - aborting pilot
[2025-06-04 11:53:56] 2025-06-04 15:53:40,465 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-06-04 11:53:56] 2025-06-04 15:53:40,465 | INFO     | will abort loop
[2025-06-04 11:53:56] 2025-06-04 15:53:40,676 | INFO     | all data control threads have been joined
[2025-06-04 11:53:56] 2025-06-04 15:53:41,038 | INFO     | all payload control threads have been joined
[2025-06-04 11:53:56] 2025-06-04 15:53:41,099 | INFO     | [job] retrieve thread has finished
[2025-06-04 11:53:56] 2025-06-04 15:53:41,101 | INFO     | [job] queue monitor thread has finished
[2025-06-04 11:53:56] 2025-06-04 15:53:41,191 | INFO     | all job control threads have been joined
[2025-06-04 11:53:56] 2025-06-04 15:53:41,293 | INFO     | [data] copytool_in thread has finished
[2025-06-04 11:53:56] 2025-06-04 15:53:41,407 | INFO     | [payload] validate_post thread has finished
[2025-06-04 11:53:56] 2025-06-04 15:53:41,469 | INFO     | [job] job monitor thread has finished
[2025-06-04 11:53:56] 2025-06-04 15:53:41,681 | INFO     | [data] control thread has finished
[2025-06-04 11:53:56] 2025-06-04 15:53:41,812 | INFO     | [payload] failed_post thread has finished
[2025-06-04 11:53:56] 2025-06-04 15:53:41,900 | INFO     | [job] validate thread has finished
[2025-06-04 11:53:56] 2025-06-04 15:53:42,043 | INFO     | [payload] control thread has finished
[2025-06-04 11:53:56] 2025-06-04 15:53:42,101 | INFO     | [data] copytool_out thread has finished
[2025-06-04 11:53:56] 2025-06-04 15:53:42,142 | INFO     | [job] create_data_payload thread has finished
[2025-06-04 11:53:56] 2025-06-04 15:53:42,196 | INFO     | [job] control thread has finished
[2025-06-04 11:53:56] 2025-06-04 15:53:42,239 | INFO     | [payload] execute_payloads thread has finished
[2025-06-04 11:53:56] 2025-06-04 15:53:42,480 | INFO     | [payload] validate_pre thread has finished
[2025-06-04 11:53:56] 2025-06-04 15:53:44,101 | INFO     | [data] queue_monitor thread has finished
[2025-06-04 11:53:56] 2025-06-04 15:53:50,338 | INFO     | job.realtimelogging is not enabled
[2025-06-04 11:53:56] 2025-06-04 15:53:51,343 | INFO     | [payload] run_realtimelog thread has finished
[2025-06-04 11:53:56] 2025-06-04 15:53:51,585 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140687343101760)>', '<ExcThread(monitor, started 140686854698752)>']
[2025-06-04 11:53:56] 2025-06-04 15:53:52,147 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-06-04 11:53:56] 2025-06-04 15:53:52,147 | INFO     | [monitor] control thread has ended
[2025-06-04 11:53:56] 2025-06-04 15:53:56,608 | INFO     | all workflow threads have been joined
[2025-06-04 11:53:56] 2025-06-04 15:53:56,608 | INFO     | end of generic workflow (traces error code: 0)
[2025-06-04 11:53:56] 2025-06-04 15:53:56,608 | INFO     | traces error code: 0
[2025-06-04 11:53:56] 2025-06-04 15:53:56,608 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-06-04 11:53:56] 2025-06-04 15:53:56,766 [wrapper] ==== pilot stdout END ====
[2025-06-04 11:53:56] 2025-06-04 15:53:56,767 [wrapper] ==== wrapper stdout RESUME ====
[2025-06-04 11:53:56] 2025-06-04 15:53:56,769 [wrapper] pilotpid: 194943
[2025-06-04 11:53:56] 2025-06-04 15:53:56,770 [wrapper] Pilot exit status: 0
[2025-06-04 11:53:56] 2025-06-04 15:53:56,776 [wrapper] pandaids: 6668051293
[2025-06-04 11:53:56] 2025-06-04 15:53:56,841 [wrapper] cleanup supervisor_pilot  365820 194944
[2025-06-04 11:53:56] 2025-06-04 15:53:56,843 [wrapper] Test setup, not cleaning
[2025-06-04 11:53:56] 2025-06-04 15:53:56,844 [wrapper] apfmon messages muted
[2025-06-04 11:53:56] 2025-06-04 15:53:56,845 [wrapper] ==== wrapper stdout END ====
[2025-06-04 11:53:56] 2025-06-04 15:53:56,847 [wrapper] ==== wrapper stderr END ====
[2025-06-04 11:53:56]  *** Error codes and diagnostics ***
[2025-06-04 11:53:56]     "exeErrorCode": 0,
[2025-06-04 11:53:56]     "exeErrorDiag": "",
[2025-06-04 11:53:56]     "pilotErrorCode": 0,
[2025-06-04 11:53:56]     "pilotErrorDiag": "",
[2025-06-04 11:53:56]  *** Listing of results directory ***
[2025-06-04 11:53:56] total 411260
[2025-06-04 11:53:56] -rw-r--r--. 1 boincer umatlas    495897 May 28 00:31 pilot3.tar.gz
[2025-06-04 11:53:56] -rw-r--r--. 1 boincer umatlas      5111 May 28 01:30 queuedata.json
[2025-06-04 11:53:56] -rwx------. 1 boincer umatlas     37140 May 28 01:32 runpilot2-wrapper.sh
[2025-06-04 11:53:56] -rw-r--r--. 1 boincer umatlas       100 Jun  4 10:59 wrapper_26015_x86_64-pc-linux-gnu
[2025-06-04 11:53:56] -rwxr-xr-x. 1 boincer umatlas      7986 Jun  4 10:59 run_atlas
[2025-06-04 11:53:56] -rw-r--r--. 1 boincer umatlas       105 Jun  4 10:59 job.xml
[2025-06-04 11:53:56] -rw-r--r--. 2 boincer umatlas 225340949 Jun  4 10:59 EVNT.44871834._003102.pool.root.1
[2025-06-04 11:53:56] -rw-r--r--. 2 boincer umatlas     15093 Jun  4 10:59 start_atlas.sh
[2025-06-04 11:53:56] drwxrwx--x. 2 boincer umatlas      4096 Jun  4 10:59 shared
[2025-06-04 11:53:56] -rw-r--r--. 2 boincer umatlas    508881 Jun  4 10:59 input.tar.gz
[2025-06-04 11:53:56] -rw-r--r--. 1 boincer umatlas         0 Jun  4 10:59 boinc_lockfile
[2025-06-04 11:53:56] -rw-r--r--. 1 boincer umatlas      2558 Jun  4 10:59 pandaJob.out
[2025-06-04 11:53:56] -rw-------. 1 boincer umatlas    987207 Jun  4 10:59 agis_schedconf.cvmfs.json
[2025-06-04 11:53:56] -rw-------. 1 boincer umatlas   1598969 Jun  4 10:59 agis_ddmendpoints.agis.ALL.json
[2025-06-04 11:53:56] drwx------. 4 boincer umatlas      4096 Jun  4 11:00 pilot3
[2025-06-04 11:53:56] -rw-r--r--. 1 boincer umatlas      6933 Jun  4 11:46 init_data.xml
[2025-06-04 11:53:56] -rw-------. 1 boincer umatlas 190729114 Jun  4 11:53 HITS.44871837._079356.pool.root.1
[2025-06-04 11:53:56] -rw-r--r--. 1 boincer umatlas       529 Jun  4 11:53 boinc_task_state.xml
[2025-06-04 11:53:56] -rw-------. 1 boincer umatlas        95 Jun  4 11:53 pilot_heartbeat.json
[2025-06-04 11:53:56] -rw-------. 1 boincer umatlas      1027 Jun  4 11:53 memory_monitor_summary.json
[2025-06-04 11:53:56] -rw-------. 1 boincer umatlas    279451 Jun  4 11:53 log.44871837._079356.job.log.tgz.1
[2025-06-04 11:53:56] -rw-------. 1 boincer umatlas      7684 Jun  4 11:53 heartbeat.json
[2025-06-04 11:53:56] -rw-------. 1 boincer umatlas      4734 Jun  4 11:53 pilotlog.txt
[2025-06-04 11:53:56] -rw-r--r--. 1 boincer umatlas      8192 Jun  4 11:53 boinc_mmap_file
[2025-06-04 11:53:56] -rw-------. 1 boincer umatlas    332688 Jun  4 11:53 log.44871837._079356.job.log.1
[2025-06-04 11:53:56] -rw-------. 1 boincer umatlas       357 Jun  4 11:53 output.list
[2025-06-04 11:53:56] -rw-r--r--. 1 boincer umatlas       620 Jun  4 11:53 runtime_log
[2025-06-04 11:53:56] -rw-------. 1 boincer umatlas    634880 Jun  4 11:53 result.tar.gz
[2025-06-04 11:53:56] -rw-r--r--. 1 boincer umatlas        27 Jun  4 11:53 wrapper_checkpoint.txt
[2025-06-04 11:53:56] -rw-r--r--. 1 boincer umatlas      8654 Jun  4 11:53 runtime_log.err
[2025-06-04 11:53:56] -rw-------. 1 boincer umatlas       649 Jun  4 11:53 lUIMDm5ZOe7nsSi4ap6QjLDmwznN0nGgGQJmUXzaDmzLbKDmkopMBo.diag
[2025-06-04 11:53:56] -rw-r--r--. 1 boincer umatlas     21301 Jun  4 11:53 stderr.txt
[2025-06-04 11:53:56] HITS file was successfully produced:
[2025-06-04 11:53:56] -rw-------. 1 boincer umatlas 190729114 Jun  4 11:53 shared/HITS.pool.root.1
[2025-06-04 11:53:56]  *** Contents of shared directory: ***
[2025-06-04 11:53:56] total 407460
[2025-06-04 11:53:56] -rw-r--r--. 2 boincer umatlas 225340949 Jun  4 10:59 ATLAS.root_0
[2025-06-04 11:53:56] -rw-r--r--. 2 boincer umatlas     15093 Jun  4 10:59 start_atlas.sh
[2025-06-04 11:53:56] -rw-r--r--. 2 boincer umatlas    508881 Jun  4 10:59 input.tar.gz
[2025-06-04 11:53:56] -rw-------. 1 boincer umatlas 190729114 Jun  4 11:53 HITS.pool.root.1
[2025-06-04 11:53:56] -rw-------. 1 boincer umatlas    634880 Jun  4 11:53 result.tar.gz
11:53:58 (191299): run_atlas exited; CPU time 22877.947936
11:53:58 (191299): called boinc_finish(0)

</stderr_txt>
]]>

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