Stderr output

<core_client_version>7.20.2</core_client_version>
<![CDATA[
<stderr_txt>
01:43:51 (1910112): wrapper (7.7.26015): starting
01:43:51 (1910112): wrapper: running run_atlas (--nthreads 4)
[2025-06-06 01:43:51] Arguments: --nthreads 4
[2025-06-06 01:43:51] Threads: 4
[2025-06-06 01:43:51] Checking for CVMFS
[2025-06-06 01:43:51] No cvmfs_config command found, will try listing directly
[2025-06-06 01:43:51] CVMFS is ok
[2025-06-06 01:43:51] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-06-06 01:43:51] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2025-06-06 01:43:51] Further information can be found at the LHC@home message board.
[2025-06-06 01:43:51] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-06-06 01:43:51] Checking for apptainer binary...
[2025-06-06 01:43:51] which: no apptainer in ((null))
[2025-06-06 01:43:51] apptainer is not installed, using version from CVMFS
[2025-06-06 01:43:51] Checking apptainer works with /cvmfs/atlas.cern.ch/repo/containers/sw/apptainer/x86_64-el7/current/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-06-06 01:43:51] WARNING: Environment variable TMPDIR already has value [/scratch/boinc/var/slot116/slots/0/.apptainertmp], will not forward new value [/tmp] from parent process environment skurut17.grid.cesnet.cz
[2025-06-06 01:43:51] apptainer works
[2025-06-06 01:43:51] Set ATHENA_PROC_NUMBER=4
[2025-06-06 01:43:51] Set ATHENA_CORE_NUMBER=4
[2025-06-06 01:43:51] Starting ATLAS job with PandaID=6679669649
[2025-06-06 01:43:51] Running command: /cvmfs/atlas.cern.ch/repo/containers/sw/apptainer/x86_64-el7/current/bin/apptainer exec -B /cvmfs,/scratch/boinc/var/slot116/slots/0 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-06-06 03:45:07]  *** The last 200 lines of the pilot log: ***
[2025-06-06 03:45:07] 2025-06-06 01:44:27,329 | INFO     | executing command: lscpu
[2025-06-06 03:45:07] 2025-06-06 01:44:27,431 | INFO     | executing command: export ATLAS_LOCAL_ROOT_BASE=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase;source ${ATLAS_LOCAL_ROOT_BASE}/user/atlasLocalSetup.sh --quiet;lsetup
[2025-06-06 03:45:07] 2025-06-06 01:44:29,015 | INFO     | monitor loop #509: job 0:6679669649 is in state 'finished'
[2025-06-06 03:45:07] 2025-06-06 01:44:29,015 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-06-06 03:45:07] 2025-06-06 01:44:31,519 | INFO     | monitor loop #510: job 0:6679669649 is in state 'finished'
[2025-06-06 03:45:07] 2025-06-06 01:44:31,519 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-06-06 03:45:07] 2025-06-06 01:44:33,392 | INFO     | CPU arch script returned: x86-64-v3
[2025-06-06 03:45:07] 2025-06-06 01:44:33,392 | INFO     | using path: /scratch/boinc/var/slot116/slots/0/PanDA_Pilot-6679669649/memory_monitor_summary.json (trf name=prmon)
[2025-06-06 03:45:07] 2025-06-06 01:44:33,393 | INFO     | extracted standard info from prmon json
[2025-06-06 03:45:07] 2025-06-06 01:44:33,393 | INFO     | extracted standard memory fields from prmon json
[2025-06-06 03:45:07] 2025-06-06 01:44:33,393 | WARNING  | GPU info not found in prmon json: 'gpu'
[2025-06-06 03:45:07] 2025-06-06 01:44:33,393 | WARNING  | format EVNTtoHITS has no such key: dbData
[2025-06-06 03:45:07] 2025-06-06 01:44:33,393 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2025-06-06 03:45:07] 2025-06-06 01:44:33,395 | INFO     | fitting pss+swap vs Time
[2025-06-06 03:45:07] 2025-06-06 01:44:33,396 | INFO     | sum of square deviations: 509440249.5
[2025-06-06 03:45:07] 2025-06-06 01:44:33,396 | INFO     | sum of deviations: 9705348087.0
[2025-06-06 03:45:07] 2025-06-06 01:44:33,397 | INFO     | mean x: 1749170649.5
[2025-06-06 03:45:07] 2025-06-06 01:44:33,397 | INFO     | mean y: 2308441.6101694917
[2025-06-06 03:45:07] 2025-06-06 01:44:33,397 | INFO     | -- intersect: -33321148104.320583
[2025-06-06 03:45:07] 2025-06-06 01:44:33,397 | INFO     | intersect: -33321148104.320583
[2025-06-06 03:45:07] 2025-06-06 01:44:33,397 | INFO     | chi2: 1.5867148980484678
[2025-06-06 03:45:07] 2025-06-06 01:44:33,397 | INFO     | sum of square deviations: 447383272.0
[2025-06-06 03:45:07] 2025-06-06 01:44:33,398 | INFO     | sum of deviations: 9312402191.0
[2025-06-06 03:45:07] 2025-06-06 01:44:33,398 | INFO     | mean x: 1749170497.0
[2025-06-06 03:45:07] 2025-06-06 01:44:33,398 | INFO     | mean y: 2307474.3008849556
[2025-06-06 03:45:07] 2025-06-06 01:44:33,398 | INFO     | -- intersect: -36407143187.268234
[2025-06-06 03:45:07] 2025-06-06 01:44:33,398 | INFO     | intersect: -36407143187.268234
[2025-06-06 03:45:07] 2025-06-06 01:44:33,398 | INFO     | chi2: 1.589702626635772
[2025-06-06 03:45:07] 2025-06-06 01:44:33,398 | INFO     | current chi2=1.589702626635772 (change=-0.18829649806521676 %)
[2025-06-06 03:45:07] 2025-06-06 01:44:33,398 | INFO     | right removable region: 112
[2025-06-06 03:45:07] 2025-06-06 01:44:33,399 | INFO     | sum of square deviations: 447383272.0
[2025-06-06 03:45:07] 2025-06-06 01:44:33,399 | INFO     | sum of deviations: -7608018576.000001
[2025-06-06 03:45:07] 2025-06-06 01:44:33,399 | INFO     | mean x: 1749170802.0
[2025-06-06 03:45:07] 2025-06-06 01:44:33,399 | INFO     | mean y: 2350185.1238938053
[2025-06-06 03:45:07] 2025-06-06 01:44:33,399 | INFO     | -- intersect: 29748039814.334747
[2025-06-06 03:45:07] 2025-06-06 01:44:33,400 | INFO     | intersect: 29748039814.334747
[2025-06-06 03:45:07] 2025-06-06 01:44:33,400 | INFO     | chi2: 0.030322708086576035
[2025-06-06 03:45:07] 2025-06-06 01:44:33,400 | INFO     | current chi2=0.030322708086576035 (change=98.08896304409377 %)
[2025-06-06 03:45:07] 2025-06-06 01:44:33,400 | INFO     | sum of square deviations: 390582207.0
[2025-06-06 03:45:07] 2025-06-06 01:44:33,401 | INFO     | sum of deviations: -6592243404.0
[2025-06-06 03:45:07] 2025-06-06 01:44:33,401 | INFO     | mean x: 1749170954.5
[2025-06-06 03:45:07] 2025-06-06 01:44:33,401 | INFO     | mean y: 2347443.5
[2025-06-06 03:45:07] 2025-06-06 01:44:33,401 | INFO     | -- intersect: 29524840994.444088
[2025-06-06 03:45:07] 2025-06-06 01:44:33,401 | INFO     | intersect: 29524840994.444088
[2025-06-06 03:45:07] 2025-06-06 01:44:33,401 | INFO     | chi2: 0.030175787338764675
[2025-06-06 03:45:07] 2025-06-06 01:44:33,401 | INFO     | current chi2=0.030175787338764675 (change=0.48452383405821875 %)
[2025-06-06 03:45:07] 2025-06-06 01:44:33,401 | INFO     | left removable region: 20
[2025-06-06 03:45:07] 2025-06-06 01:44:33,402 | INFO     | sum of square deviations: 241429643.0
[2025-06-06 03:45:07] 2025-06-06 01:44:33,402 | INFO     | sum of deviations: -3254153732.5000005
[2025-06-06 03:45:07] 2025-06-06 01:44:33,402 | INFO     | mean x: 1749171076.5
[2025-06-06 03:45:07] 2025-06-06 01:44:33,402 | INFO     | mean y: 2337922.163043478
[2025-06-06 03:45:07] 2025-06-06 01:44:33,402 | INFO     | -- intersect: 23578861155.366512
[2025-06-06 03:45:07] 2025-06-06 01:44:33,402 | INFO     | intersect: 23578861155.366512
[2025-06-06 03:45:07] 2025-06-06 01:44:33,403 | INFO     | chi2: 0.023325663168279213
[2025-06-06 03:45:07] 2025-06-06 01:44:33,403 | INFO     | -- intersect: 23578861155.366512
[2025-06-06 03:45:07] 2025-06-06 01:44:33,403 | INFO     | current memory leak: -13.48 B/s (using 92 data points, chi2=0.02)
[2025-06-06 03:45:07] 2025-06-06 01:44:33,403 | INFO     | ..............................
[2025-06-06 03:45:07] 2025-06-06 01:44:33,403 | INFO     | . Timing measurements:
[2025-06-06 03:45:07] 2025-06-06 01:44:33,403 | INFO     | . get job = 0 s
[2025-06-06 03:45:07] 2025-06-06 01:44:33,404 | INFO     | . initial setup = 1 s
[2025-06-06 03:45:07] 2025-06-06 01:44:33,404 | INFO     | . payload setup = 10 s
[2025-06-06 03:45:07] 2025-06-06 01:44:33,404 | INFO     | . stage-in = 0 s
[2025-06-06 03:45:07] 2025-06-06 01:44:33,404 | INFO     | . payload execution = 7188 s
[2025-06-06 03:45:07] 2025-06-06 01:44:33,404 | INFO     | . stage-out = 0 s
[2025-06-06 03:45:07] 2025-06-06 01:44:33,404 | INFO     | . log creation = 0 s
[2025-06-06 03:45:07] 2025-06-06 01:44:33,404 | INFO     | ..............................
[2025-06-06 03:45:07] 2025-06-06 01:44:33,848 | INFO     | 
[2025-06-06 03:45:07] 2025-06-06 01:44:33,849 | INFO     | job summary report
[2025-06-06 03:45:07] 2025-06-06 01:44:33,849 | INFO     | --------------------------------------------------
[2025-06-06 03:45:07] 2025-06-06 01:44:33,849 | INFO     | PanDA job id: 6679669649
[2025-06-06 03:45:07] 2025-06-06 01:44:33,849 | INFO     | task id: 45006595
[2025-06-06 03:45:07] 2025-06-06 01:44:33,849 | INFO     | errors: (none)
[2025-06-06 03:45:07] 2025-06-06 01:44:33,849 | INFO     | status: LOG_TRANSFER = DONE 
[2025-06-06 03:45:07] 2025-06-06 01:44:33,849 | INFO     | pilot state: finished 
[2025-06-06 03:45:07] 2025-06-06 01:44:33,850 | INFO     | transexitcode: 0
[2025-06-06 03:45:07] 2025-06-06 01:44:33,850 | INFO     | exeerrorcode: 0
[2025-06-06 03:45:07] 2025-06-06 01:44:33,850 | INFO     | exeerrordiag: 
[2025-06-06 03:45:07] 2025-06-06 01:44:33,850 | INFO     | exitcode: 0
[2025-06-06 03:45:07] 2025-06-06 01:44:33,850 | INFO     | exitmsg: OK
[2025-06-06 03:45:07] 2025-06-06 01:44:33,850 | INFO     | cpuconsumptiontime: 27079 s
[2025-06-06 03:45:07] 2025-06-06 01:44:33,850 | INFO     | nevents: 400
[2025-06-06 03:45:07] 2025-06-06 01:44:33,850 | INFO     | neventsw: 0
[2025-06-06 03:45:07] 2025-06-06 01:44:33,850 | INFO     | pid: 1922494
[2025-06-06 03:45:07] 2025-06-06 01:44:33,850 | INFO     | pgrp: 1922494
[2025-06-06 03:45:07] 2025-06-06 01:44:33,850 | INFO     | corecount: 4
[2025-06-06 03:45:07] 2025-06-06 01:44:33,850 | INFO     | event service: False
[2025-06-06 03:45:07] 2025-06-06 01:44:33,850 | INFO     | sizes: {0: 2397303, 7: 2397509, 11: 2397537, 7202: 2424761, 7203: 2433781, 7204: 2433781, 7210: 2434079}
[2025-06-06 03:45:07] 2025-06-06 01:44:33,851 | INFO     | --------------------------------------------------
[2025-06-06 03:45:07] 2025-06-06 01:44:33,851 | INFO     | 
[2025-06-06 03:45:07] 2025-06-06 01:44:33,851 | INFO     | executing command: ls -lF /scratch/boinc/var/slot116/slots/0
[2025-06-06 03:45:07] 2025-06-06 01:44:33,883 | INFO     | queue jobs had 0 job(s) [purged]
[2025-06-06 03:45:07] 2025-06-06 01:44:33,884 | INFO     | queue payloads had 0 job(s) [purged]
[2025-06-06 03:45:07] 2025-06-06 01:44:33,884 | INFO     | queue data_in had 0 job(s) [purged]
[2025-06-06 03:45:07] 2025-06-06 01:44:33,884 | INFO     | queue data_out had 0 job(s) [purged]
[2025-06-06 03:45:07] 2025-06-06 01:44:33,884 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-06-06 03:45:07] 2025-06-06 01:44:33,884 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-06-06 03:45:07] 2025-06-06 01:44:33,884 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-06-06 03:45:07] 2025-06-06 01:44:33,884 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-06-06 03:45:07] 2025-06-06 01:44:33,884 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-06-06 03:45:07] 2025-06-06 01:44:33,884 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-06-06 03:45:07] 2025-06-06 01:44:33,884 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-06-06 03:45:07] 2025-06-06 01:44:33,884 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-06-06 03:45:07] 2025-06-06 01:44:33,884 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-06-06 03:45:07] 2025-06-06 01:44:33,885 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-06-06 03:45:07] 2025-06-06 01:44:33,885 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-06-06 03:45:07] 2025-06-06 01:44:33,885 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-06-06 03:45:07] 2025-06-06 01:44:33,885 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-06-06 03:45:07] 2025-06-06 01:44:33,885 | INFO     | queue completed_jobids has 1 job(s)
[2025-06-06 03:45:07] 2025-06-06 01:44:33,885 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-06-06 03:45:07] 2025-06-06 01:44:33,885 | INFO     | queue messages had 0 job(s) [purged]
[2025-06-06 03:45:07] 2025-06-06 01:44:33,885 | INFO     | job 6679669649 has completed (purged errors)
[2025-06-06 03:45:07] 2025-06-06 01:44:33,885 | INFO     | overall cleanup function is called
[2025-06-06 03:45:07] 2025-06-06 01:44:34,894 | INFO     | --- collectZombieJob: --- 10, [1922494]
[2025-06-06 03:45:07] 2025-06-06 01:44:34,894 | INFO     | zombie collector waiting for pid 1922494
[2025-06-06 03:45:07] 2025-06-06 01:44:34,894 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-06-06 03:45:07] 2025-06-06 01:44:34,894 | INFO     | collected zombie processes
[2025-06-06 03:45:07] 2025-06-06 01:44:34,894 | INFO     | will attempt to kill all subprocesses of pid=1922494
[2025-06-06 03:45:07] 2025-06-06 01:44:35,537 | INFO     | process IDs to be killed: [1922494] (in reverse order)
[2025-06-06 03:45:07] 2025-06-06 01:44:35,752 | WARNING  | found no corresponding commands to process id(s)
[2025-06-06 03:45:07] 2025-06-06 01:44:35,753 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-06-06 03:45:07] 2025-06-06 01:44:35,778 | INFO     | did not find any defunct processes belonging to 1922494
[2025-06-06 03:45:07] 2025-06-06 01:44:35,800 | INFO     | did not find any defunct processes belonging to 1922494
[2025-06-06 03:45:07] 2025-06-06 01:44:35,800 | INFO     | ready for new job
[2025-06-06 03:45:07] 2025-06-06 01:44:35,800 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-06-06 03:45:07] 2025-06-06 01:44:35,802 | INFO     | **************************************
[2025-06-06 03:45:07] 2025-06-06 01:44:35,802 | INFO     | ***  PanDA Pilot version 3.10.2.2  ***
[2025-06-06 03:45:07] 2025-06-06 01:44:35,802 | INFO     | **************************************
[2025-06-06 03:45:07] 2025-06-06 01:44:35,802 | INFO     | 
[2025-06-06 03:45:07] 2025-06-06 01:44:35,810 | INFO     | architecture information:
[2025-06-06 03:45:07] 2025-06-06 01:44:35,811 | INFO     | executing command: cat /etc/os-release
[2025-06-06 03:45:07] 2025-06-06 01:44:35,834 | INFO     | cat /etc/os-release:
[2025-06-06 03:45:07] NAME="CentOS Linux"
[2025-06-06 03:45:07] VERSION="7 (Core)"
[2025-06-06 03:45:07] ID="centos"
[2025-06-06 03:45:07] ID_LIKE="rhel fedora"
[2025-06-06 03:45:07] VERSION_ID="7"
[2025-06-06 03:45:07] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-06-06 03:45:07] ANSI_COLOR="0;31"
[2025-06-06 03:45:07] CPE_NAME="cpe:/o:centos:centos:7"
[2025-06-06 03:45:07] HOME_URL="https://www.centos.org/"
[2025-06-06 03:45:07] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-06-06 03:45:07] 
[2025-06-06 03:45:07] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-06-06 03:45:07] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-06-06 03:45:07] REDHAT_SUPPORT_PRODUCT="centos"
[2025-06-06 03:45:07] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-06-06 03:45:07] 
[2025-06-06 03:45:07] 2025-06-06 01:44:35,835 | INFO     | **************************************
[2025-06-06 03:45:07] 2025-06-06 01:44:36,338 | INFO     | executing command: df -mP /scratch/boinc/var/slot116/slots/0
[2025-06-06 03:45:07] 2025-06-06 01:44:36,361 | INFO     | sufficient remaining disk space (3272173682688 B)
[2025-06-06 03:45:07] 2025-06-06 01:44:36,361 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-06-06 03:45:07] 2025-06-06 01:44:36,362 | INFO     | current server update state: UPDATING_FINAL
[2025-06-06 03:45:07] 2025-06-06 01:44:36,362 | INFO     | update_server=False
[2025-06-06 03:45:07] 2025-06-06 01:44:36,362 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-06-06 03:45:07] 2025-06-06 01:44:36,456 | INFO     | found 0 job(s) in 20 queues
[2025-06-06 03:45:07] 2025-06-06 01:44:36,457 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-06-06 03:45:07] 2025-06-06 01:44:36,457 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-06-06 03:45:07] 2025-06-06 01:44:36,530 | WARNING  | job monitor detected an abort_job request (signal=args.signal)
[2025-06-06 03:45:07] 2025-06-06 01:44:36,530 | WARNING  | cannot recover job monitoring - aborting pilot
[2025-06-06 03:45:07] 2025-06-06 01:44:36,530 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-06-06 03:45:07] 2025-06-06 01:44:36,530 | INFO     | will abort loop
[2025-06-06 03:45:07] 2025-06-06 01:44:36,722 | INFO     | all payload control threads have been joined
[2025-06-06 03:45:07] 2025-06-06 01:44:36,744 | INFO     | all data control threads have been joined
[2025-06-06 03:45:07] 2025-06-06 01:44:37,340 | INFO     | all job control threads have been joined
[2025-06-06 03:45:07] 2025-06-06 01:44:37,367 | INFO     | [job] retrieve thread has finished
[2025-06-06 03:45:07] 2025-06-06 01:44:37,535 | INFO     | [job] job monitor thread has finished
[2025-06-06 03:45:07] 2025-06-06 01:44:37,710 | INFO     | [payload] execute_payloads thread has finished
[2025-06-06 03:45:07] 2025-06-06 01:44:37,728 | INFO     | [payload] control thread has finished
[2025-06-06 03:45:07] 2025-06-06 01:44:37,744 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-06-06 03:45:07] 2025-06-06 01:44:37,749 | INFO     | [data] control thread has finished
[2025-06-06 03:45:07] 2025-06-06 01:44:37,751 | INFO     | [job] validate thread has finished
[2025-06-06 03:45:07] 2025-06-06 01:44:37,827 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-06-06 03:45:07] 2025-06-06 01:44:37,853 | INFO     | [data] copytool_in thread has finished
[2025-06-06 03:45:07] 2025-06-06 01:44:38,167 | INFO     | [job] create_data_payload thread has finished
[2025-06-06 03:45:07] 2025-06-06 01:44:38,252 | INFO     | [payload] validate_pre thread has finished
[2025-06-06 03:45:07] 2025-06-06 01:44:38,346 | INFO     | [job] control thread has finished
[2025-06-06 03:45:07] 2025-06-06 01:44:38,386 | INFO     | [payload] run_realtimelog thread has finished
[2025-06-06 03:45:07] 2025-06-06 01:44:38,488 | INFO     | [payload] validate_post thread has finished
[2025-06-06 03:45:07] 2025-06-06 01:44:38,506 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-06-06 03:45:07] 2025-06-06 01:44:38,633 | INFO     | [payload] failed_post thread has finished
[2025-06-06 03:45:07] 2025-06-06 01:44:39,511 | INFO     | [job] queue monitor thread has finished
[2025-06-06 03:45:07] 2025-06-06 01:44:39,749 | INFO     | [data] copytool_out thread has finished
[2025-06-06 03:45:07] 2025-06-06 01:44:41,834 | INFO     | [data] queue_monitor thread has finished
[2025-06-06 03:45:07] 2025-06-06 01:44:43,422 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 22922508117824)>', '<ExcThread(monitor, started 22922269783808)>']
[2025-06-06 03:45:07] 2025-06-06 01:44:43,484 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-06-06 03:45:07] 2025-06-06 01:44:43,485 | INFO     | [monitor] control thread has ended
[2025-06-06 03:45:07] 2025-06-06 01:44:48,427 | INFO     | all workflow threads have been joined
[2025-06-06 03:45:07] 2025-06-06 01:44:48,428 | INFO     | end of generic workflow (traces error code: 0)
[2025-06-06 03:45:07] 2025-06-06 01:44:48,428 | INFO     | traces error code: 0
[2025-06-06 03:45:07] 2025-06-06 01:44:48,428 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-06-06 03:45:07] 2025-06-06 01:44:48,561 [wrapper] ==== pilot stdout END ====
[2025-06-06 03:45:07] 2025-06-06 01:44:48,565 [wrapper] ==== wrapper stdout RESUME ====
[2025-06-06 03:45:07] 2025-06-06 01:44:48,569 [wrapper] pilotpid: 1915099
[2025-06-06 03:45:07] 2025-06-06 01:44:48,572 [wrapper] Pilot exit status: 0
[2025-06-06 03:45:07] 2025-06-06 01:44:48,588 [wrapper] pandaids: 6679669649
[2025-06-06 03:45:07] 2025-06-06 01:44:48,717 [wrapper] cleanup supervisor_pilot 2262137 1915100
[2025-06-06 03:45:07] 2025-06-06 01:44:48,721 [wrapper] Test setup, not cleaning
[2025-06-06 03:45:07] 2025-06-06 01:44:48,725 [wrapper] apfmon messages muted
[2025-06-06 03:45:07] 2025-06-06 01:44:48,729 [wrapper] ==== wrapper stdout END ====
[2025-06-06 03:45:07] 2025-06-06 01:44:48,733 [wrapper] ==== wrapper stderr END ====
[2025-06-06 03:45:07]  *** Error codes and diagnostics ***
[2025-06-06 03:45:07]     "exeErrorCode": 0,
[2025-06-06 03:45:07]     "exeErrorDiag": "",
[2025-06-06 03:45:07]     "pilotErrorCode": 0,
[2025-06-06 03:45:07]     "pilotErrorDiag": "",
[2025-06-06 03:45:07]  *** Listing of results directory ***
[2025-06-06 03:45:07] total 383340
[2025-06-06 03:45:07] -rw-r--r-- 1 boinc boinc    495897 Jun  4 13:48 pilot3.tar.gz
[2025-06-06 03:45:07] -rw-r--r-- 1 boinc boinc      5111 Jun  4 13:55 queuedata.json
[2025-06-06 03:45:07] -rwx------ 1 boinc boinc     37140 Jun  4 13:57 runpilot2-wrapper.sh
[2025-06-06 03:45:07] -rw-r--r-- 1 boinc boinc       100 Jun  6 01:43 wrapper_26015_x86_64-pc-linux-gnu
[2025-06-06 03:45:07] -rwxr-xr-x 1 boinc boinc      7986 Jun  6 01:43 run_atlas
[2025-06-06 03:45:07] -rw-r--r-- 1 boinc boinc       105 Jun  6 01:43 job.xml
[2025-06-06 03:45:07] -rw-r--r-- 1 boinc boinc      6687 Jun  6 01:43 init_data.xml
[2025-06-06 03:45:07] -rw-r--r-- 2 boinc boinc 214900673 Jun  6 01:43 EVNT.45006593._001577.pool.root.1
[2025-06-06 03:45:07] -rw-r--r-- 2 boinc boinc    508883 Jun  6 01:43 input.tar.gz
[2025-06-06 03:45:07] -rw-r--r-- 2 boinc boinc     15093 Jun  6 01:43 start_atlas.sh
[2025-06-06 03:45:07] drwxrwx--x 2 boinc boinc      4096 Jun  6 01:43 shared
[2025-06-06 03:45:07] -rw-r--r-- 1 boinc boinc         0 Jun  6 01:43 boinc_lockfile
[2025-06-06 03:45:07] -rw-r--r-- 1 boinc boinc      2524 Jun  6 01:43 pandaJob.out
[2025-06-06 03:45:07] -rw------- 1 boinc boinc    987721 Jun  6 01:44 agis_schedconf.cvmfs.json
[2025-06-06 03:45:07] -rw------- 1 boinc boinc   1598969 Jun  6 01:44 agis_ddmendpoints.agis.ALL.json
[2025-06-06 03:45:07] drwx------ 4 boinc boinc      4096 Jun  6 01:44 pilot3
[2025-06-06 03:45:07] -rw------- 1 boinc boinc        95 Jun  6 03:43 pilot_heartbeat.json
[2025-06-06 03:45:07] -rw------- 1 boinc boinc 171931655 Jun  6 03:43 HITS.45006595._056609.pool.root.1
[2025-06-06 03:45:07] -rw-r--r-- 1 boinc boinc       528 Jun  6 03:44 boinc_task_state.xml
[2025-06-06 03:45:07] -rw------- 1 boinc boinc      1026 Jun  6 03:44 memory_monitor_summary.json
[2025-06-06 03:45:07] -rw------- 1 boinc boinc    256894 Jun  6 03:44 log.45006595._056609.job.log.tgz.1
[2025-06-06 03:45:07] -rw------- 1 boinc boinc      7696 Jun  6 03:44 heartbeat.json
[2025-06-06 03:45:07] -rw------- 1 boinc boinc      4551 Jun  6 03:44 pilotlog.txt
[2025-06-06 03:45:07] -rw------- 1 boinc boinc    680395 Jun  6 03:44 log.45006595._056609.job.log.1
[2025-06-06 03:45:07] -rw------- 1 boinc boinc       357 Jun  6 03:44 output.list
[2025-06-06 03:45:07] -rw-r--r-- 1 boinc boinc       620 Jun  6 03:44 runtime_log
[2025-06-06 03:45:07] -rw------- 1 boinc boinc    952320 Jun  6 03:44 result.tar.gz
[2025-06-06 03:45:07] -rw-r--r-- 1 boinc boinc      9040 Jun  6 03:44 runtime_log.err
[2025-06-06 03:45:07] -rw------- 1 boinc boinc       662 Jun  6 03:44 ZlALDmmv1g7n9Rq4apOajLDm4fhM0noT9bVof3QYDmt2aKDmCZILtm.diag
[2025-06-06 03:45:07] -rw-r--r-- 1 boinc boinc        26 Jun  6 03:45 wrapper_checkpoint.txt
[2025-06-06 03:45:07] -rw-r--r-- 1 boinc boinc      8192 Jun  6 03:45 boinc_mmap_file
[2025-06-06 03:45:07] -rw-r--r-- 1 boinc boinc     20901 Jun  6 03:45 stderr.txt
[2025-06-06 03:45:07] HITS file was successfully produced:
[2025-06-06 03:45:07] -rw------- 1 boinc boinc 171931655 Jun  6 03:43 shared/HITS.pool.root.1
[2025-06-06 03:45:07]  *** Contents of shared directory: ***
[2025-06-06 03:45:07] total 379224
[2025-06-06 03:45:07] -rw-r--r-- 2 boinc boinc 214900673 Jun  6 01:43 ATLAS.root_0
[2025-06-06 03:45:07] -rw-r--r-- 2 boinc boinc    508883 Jun  6 01:43 input.tar.gz
[2025-06-06 03:45:07] -rw-r--r-- 2 boinc boinc     15093 Jun  6 01:43 start_atlas.sh
[2025-06-06 03:45:07] -rw------- 1 boinc boinc 171931655 Jun  6 03:43 HITS.pool.root.1
[2025-06-06 03:45:07] -rw------- 1 boinc boinc    952320 Jun  6 03:44 result.tar.gz
03:45:08 (1910112): run_atlas exited; CPU time 27441.746805
03:45:08 (1910112): called boinc_finish(0)

</stderr_txt>
]]>

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