Stderr output

<core_client_version>7.7.0</core_client_version>
<![CDATA[
<stderr_txt>
10:06:32 (75825): wrapper (7.7.26015): starting
10:06:32 (75825): wrapper: running run_atlas (--nthreads 8)
[2025-06-04 10:06:32] Arguments: --nthreads 8
[2025-06-04 10:06:32] Threads: 8
[2025-06-04 10:06:32] Checking for CVMFS
[2025-06-04 10:06:32] Probing /cvmfs/atlas.cern.ch... OK
[2025-06-04 10:06:32] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-06-04 10:06:32] Running cvmfs_config stat atlas.cern.ch
[2025-06-04 10:06:32] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-06-04 10:06:32] 2.11.2.0 73730 11083 345448 146781 3 622 15990851 18432000 15009 130560 0 90421847 99.412 112706517 72186 http://cvmfs-s1fnal.opensciencegrid.org:8000/cvmfs/atlas.cern.ch http://192.41.237.109:6081 1
[2025-06-04 10:06:32] CVMFS is ok
[2025-06-04 10:06:32] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-06-04 10:06:32] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2025-06-04 10:06:32] Further information can be found at the LHC@home message board.
[2025-06-04 10:06:32] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-06-04 10:06:32] Checking for apptainer binary...
[2025-06-04 10:06:32] Using apptainer found in PATH at /usr/bin/apptainer
[2025-06-04 10:06:32] Running /usr/bin/apptainer --version
[2025-06-04 10:06:32] apptainer version 1.3.2-1.el7
[2025-06-04 10:06:32] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-06-04 10:06:34] c-212-10.aglt2.org
[2025-06-04 10:06:34] apptainer works
[2025-06-04 10:06:34] Set ATHENA_PROC_NUMBER=8
[2025-06-04 10:06:34] Set ATHENA_CORE_NUMBER=8
[2025-06-04 10:06:34] Starting ATLAS job with PandaID=6667883773
[2025-06-04 10:06:34] Running command: /usr/bin/apptainer exec -B /cvmfs,/tmp/boinchome/slots/5 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-06-04 11:47:53]  *** The last 200 lines of the pilot log: ***
[2025-06-04 11:47:53]  inputddms=['NDGF-T1_DATADISK', 'CERN-PROD_DATADISK']
[2025-06-04 11:47:53]  is_altstaged=None
[2025-06-04 11:47:53]  is_tar=False
[2025-06-04 11:47:53]  lfn=log.44871837._076734.job.log.tgz.1
[2025-06-04 11:47:53]  mtime=0
[2025-06-04 11:47:53]  protocol_id=None
[2025-06-04 11:47:53]  protocols=[{'endpoint': 'davs://dav.ndgf.org:443', 'flavour': 'WEBDAV', 'id': 331, 'path': '/atlas/disk/atlasdatadisk/rucio/'}]
[2025-06-04 11:47:53]  replicas=None
[2025-06-04 11:47:53]  scope=mc23_13p6TeV
[2025-06-04 11:47:53]  status=None
[2025-06-04 11:47:53]  status_code=0
[2025-06-04 11:47:53]  storage_token=
[2025-06-04 11:47:53]  surl=/tmp/boinchome/slots/5/PanDA_Pilot-6667883773/log.44871837._076734.job.log.tgz.1
[2025-06-04 11:47:53]  turl=davs://dav.ndgf.org:443/atlas/disk/atlasdatadisk/rucio/mc23_13p6TeV/37/d8/log.44871837._076734.job.log.tgz.1
[2025-06-04 11:47:53]  workdir=None
[2025-06-04 11:47:53] ]
[2025-06-04 11:47:53] 2025-06-04 15:47:33,325 | INFO     | transferring file log.44871837._076734.job.log.tgz.1 from /tmp/boinchome/slots/5/PanDA_Pilot-6667883773/log.44871837._076734.job.log.tgz.1 to /tmp/boinchome/slots/
[2025-06-04 11:47:53] 2025-06-04 15:47:33,325 | INFO     | executing command: /usr/bin/env mv /tmp/boinchome/slots/5/PanDA_Pilot-6667883773/log.44871837._076734.job.log.tgz.1 /tmp/boinchome/slots/5/log.44871837._076734.job
[2025-06-04 11:47:53] 2025-06-04 15:47:33,337 | INFO     | adding to output.list: log.44871837._076734.job.log.tgz.1 davs://dav.ndgf.org:443/atlas/disk/atlasdatadisk/rucio/mc23_13p6TeV/37/d8/log.44871837._076734.job.log.tg
[2025-06-04 11:47:53] 2025-06-04 15:47:33,338 | INFO     | alt stage-out settings: ['pl', 'write_lan', 'w', 'default'], allow_altstageout=False, remain_files=0, has_altstorage=True
[2025-06-04 11:47:53] 2025-06-04 15:47:33,338 | INFO     | summary of transferred files:
[2025-06-04 11:47:53] 2025-06-04 15:47:33,338 | INFO     |  -- lfn=log.44871837._076734.job.log.tgz.1, status_code=0, status=transferred
[2025-06-04 11:47:53] 2025-06-04 15:47:33,338 | INFO     | stage-out finished correctly
[2025-06-04 11:47:53] 2025-06-04 15:47:34,561 | INFO     | monitor loop #448: job 0:6667883773 is in state 'finished'
[2025-06-04 11:47:53] 2025-06-04 15:47:34,562 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-06-04 11:47:53] 2025-06-04 15:47:36,754 | INFO     | finished stage-out for finished payload, adding job to finished_jobs queue
[2025-06-04 11:47:53] 2025-06-04 15:47:37,064 | INFO     | monitor loop #449: job 0:6667883773 is in state 'finished'
[2025-06-04 11:47:53] 2025-06-04 15:47:37,064 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-06-04 11:47:53] 2025-06-04 15:47:38,614 | INFO     | job 6667883773 has state=finished
[2025-06-04 11:47:53] 2025-06-04 15:47:38,614 | INFO     | preparing for final server update for job 6667883773 in state='finished'
[2025-06-04 11:47:53] 2025-06-04 15:47:38,614 | INFO     | this job has now completed (state=finished)
[2025-06-04 11:47:53] 2025-06-04 15:47:38,614 | INFO     | pilot will not update the server (heartbeat message will be written to file)
[2025-06-04 11:47:53] 2025-06-04 15:47:38,614 | INFO     | log transfer has been attempted: DONE
[2025-06-04 11:47:53] 2025-06-04 15:47:38,614 | INFO     | job 6667883773 has finished - writing final server update
[2025-06-04 11:47:53] 2025-06-04 15:47:38,615 | INFO     | total number of processed events: 400 (read)
[2025-06-04 11:47:53] 2025-06-04 15:47:38,617 | INFO     | executing command: lscpu
[2025-06-04 11:47:53] 2025-06-04 15:47:38,654 | INFO     | executing command: export ATLAS_LOCAL_ROOT_BASE=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase;source ${ATLAS_LOCAL_ROOT_BASE}/user/atlasLocalSetup.sh --quiet;lsetup
[2025-06-04 11:47:53] 2025-06-04 15:47:39,564 | INFO     | monitor loop #450: job 0:6667883773 is in state 'finished'
[2025-06-04 11:47:53] 2025-06-04 15:47:39,565 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-06-04 11:47:53] 2025-06-04 15:47:41,319 | INFO     | CPU arch script returned: x86-64-v3
[2025-06-04 11:47:53] 2025-06-04 15:47:41,320 | INFO     | using path: /tmp/boinchome/slots/5/PanDA_Pilot-6667883773/memory_monitor_summary.json (trf name=prmon)
[2025-06-04 11:47:53] 2025-06-04 15:47:41,320 | INFO     | extracted standard info from prmon json
[2025-06-04 11:47:53] 2025-06-04 15:47:41,320 | INFO     | extracted standard memory fields from prmon json
[2025-06-04 11:47:53] 2025-06-04 15:47:41,321 | WARNING  | GPU info not found in prmon json: 'gpu'
[2025-06-04 11:47:53] 2025-06-04 15:47:41,321 | WARNING  | format EVNTtoHITS has no such key: dbData
[2025-06-04 11:47:53] 2025-06-04 15:47:41,321 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2025-06-04 11:47:53] 2025-06-04 15:47:41,322 | INFO     | fitting pss+swap vs Time
[2025-06-04 11:47:53] 2025-06-04 15:47:41,322 | INFO     | sum of square deviations: 241429643.0
[2025-06-04 11:47:53] 2025-06-04 15:47:41,322 | INFO     | sum of deviations: -629394522.9999999
[2025-06-04 11:47:53] 2025-06-04 15:47:41,322 | INFO     | mean x: 1749049119.5
[2025-06-04 11:47:53] 2025-06-04 15:47:41,322 | INFO     | mean y: 2499938.1739130435
[2025-06-04 11:47:53] 2025-06-04 15:47:41,322 | INFO     | -- intersect: 4562180027.960039
[2025-06-04 11:47:53] 2025-06-04 15:47:41,322 | INFO     | intersect: 4562180027.960039
[2025-06-04 11:47:53] 2025-06-04 15:47:41,323 | INFO     | chi2: 0.0035068210934401426
[2025-06-04 11:47:53] 2025-06-04 15:47:41,323 | INFO     | -- intersect: 4562180027.960039
[2025-06-04 11:47:53] 2025-06-04 15:47:41,323 | INFO     | current memory leak: -2.61 B/s (using 92 data points, chi2=0.00)
[2025-06-04 11:47:53] 2025-06-04 15:47:41,323 | INFO     | ..............................
[2025-06-04 11:47:53] 2025-06-04 15:47:41,323 | INFO     | . Timing measurements:
[2025-06-04 11:47:53] 2025-06-04 15:47:41,323 | INFO     | . get job = 0 s
[2025-06-04 11:47:53] 2025-06-04 15:47:41,323 | INFO     | . initial setup = 2 s
[2025-06-04 11:47:53] 2025-06-04 15:47:41,323 | INFO     | . payload setup = 9 s
[2025-06-04 11:47:53] 2025-06-04 15:47:41,323 | INFO     | . stage-in = 0 s
[2025-06-04 11:47:53] 2025-06-04 15:47:41,323 | INFO     | . payload execution = 6016 s
[2025-06-04 11:47:53] 2025-06-04 15:47:41,323 | INFO     | . stage-out = 0 s
[2025-06-04 11:47:53] 2025-06-04 15:47:41,323 | INFO     | . log creation = 0 s
[2025-06-04 11:47:53] 2025-06-04 15:47:41,323 | INFO     | ..............................
[2025-06-04 11:47:53] 2025-06-04 15:47:41,503 | INFO     | PID=80856 has CPU usage=5.1% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i PR 
[2025-06-04 11:47:53] 2025-06-04 15:47:41,503 | INFO     | .. there are 14 such processes running
[2025-06-04 11:47:53] 2025-06-04 15:47:41,695 | INFO     | 
[2025-06-04 11:47:53] 2025-06-04 15:47:41,695 | INFO     | job summary report
[2025-06-04 11:47:53] 2025-06-04 15:47:41,695 | INFO     | --------------------------------------------------
[2025-06-04 11:47:53] 2025-06-04 15:47:41,695 | INFO     | PanDA job id: 6667883773
[2025-06-04 11:47:53] 2025-06-04 15:47:41,695 | INFO     | task id: 44871837
[2025-06-04 11:47:53] 2025-06-04 15:47:41,695 | INFO     | errors: (none)
[2025-06-04 11:47:53] 2025-06-04 15:47:41,695 | INFO     | status: LOG_TRANSFER = DONE 
[2025-06-04 11:47:53] 2025-06-04 15:47:41,695 | INFO     | pilot state: finished 
[2025-06-04 11:47:53] 2025-06-04 15:47:41,695 | INFO     | transexitcode: 0
[2025-06-04 11:47:53] 2025-06-04 15:47:41,695 | INFO     | exeerrorcode: 0
[2025-06-04 11:47:53] 2025-06-04 15:47:41,695 | INFO     | exeerrordiag: 
[2025-06-04 11:47:53] 2025-06-04 15:47:41,695 | INFO     | exitcode: 0
[2025-06-04 11:47:53] 2025-06-04 15:47:41,695 | INFO     | exitmsg: OK
[2025-06-04 11:47:53] 2025-06-04 15:47:41,695 | INFO     | cpuconsumptiontime: 38522 s
[2025-06-04 11:47:53] 2025-06-04 15:47:41,695 | INFO     | nevents: 400
[2025-06-04 11:47:53] 2025-06-04 15:47:41,695 | INFO     | neventsw: 0
[2025-06-04 11:47:53] 2025-06-04 15:47:41,695 | INFO     | pid: 88000
[2025-06-04 11:47:53] 2025-06-04 15:47:41,695 | INFO     | pgrp: 88000
[2025-06-04 11:47:53] 2025-06-04 15:47:41,696 | INFO     | corecount: 8
[2025-06-04 11:47:53] 2025-06-04 15:47:41,696 | INFO     | event service: False
[2025-06-04 11:47:53] 2025-06-04 15:47:41,696 | INFO     | sizes: {0: 2397389, 6: 2397595, 11: 2397623, 6029: 2424187, 6030: 2433128, 6033: 2433184, 6038: 2433482}
[2025-06-04 11:47:53] 2025-06-04 15:47:41,696 | INFO     | --------------------------------------------------
[2025-06-04 11:47:53] 2025-06-04 15:47:41,696 | INFO     | 
[2025-06-04 11:47:53] 2025-06-04 15:47:41,696 | INFO     | executing command: ls -lF /tmp/boinchome/slots/5
[2025-06-04 11:47:53] 2025-06-04 15:47:41,711 | INFO     | queue jobs had 0 job(s) [purged]
[2025-06-04 11:47:53] 2025-06-04 15:47:41,711 | INFO     | queue payloads had 0 job(s) [purged]
[2025-06-04 11:47:53] 2025-06-04 15:47:41,711 | INFO     | queue data_in had 0 job(s) [purged]
[2025-06-04 11:47:53] 2025-06-04 15:47:41,711 | INFO     | queue data_out had 0 job(s) [purged]
[2025-06-04 11:47:53] 2025-06-04 15:47:41,711 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-06-04 11:47:53] 2025-06-04 15:47:41,711 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-06-04 11:47:53] 2025-06-04 15:47:41,711 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-06-04 11:47:53] 2025-06-04 15:47:41,711 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-06-04 11:47:53] 2025-06-04 15:47:41,711 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-06-04 11:47:53] 2025-06-04 15:47:41,711 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-06-04 11:47:53] 2025-06-04 15:47:41,711 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-06-04 11:47:53] 2025-06-04 15:47:41,711 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-06-04 11:47:53] 2025-06-04 15:47:41,711 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-06-04 11:47:53] 2025-06-04 15:47:41,711 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-06-04 11:47:53] 2025-06-04 15:47:41,711 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-06-04 11:47:53] 2025-06-04 15:47:41,711 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-06-04 11:47:53] 2025-06-04 15:47:41,711 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-06-04 11:47:53] 2025-06-04 15:47:41,711 | INFO     | queue completed_jobids has 1 job(s)
[2025-06-04 11:47:53] 2025-06-04 15:47:41,711 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-06-04 11:47:53] 2025-06-04 15:47:41,711 | INFO     | queue messages had 0 job(s) [purged]
[2025-06-04 11:47:53] 2025-06-04 15:47:41,712 | INFO     | job 6667883773 has completed (purged errors)
[2025-06-04 11:47:53] 2025-06-04 15:47:41,712 | INFO     | overall cleanup function is called
[2025-06-04 11:47:53] 2025-06-04 15:47:42,714 | INFO     | --- collectZombieJob: --- 10, [88000]
[2025-06-04 11:47:53] 2025-06-04 15:47:42,714 | INFO     | zombie collector waiting for pid 88000
[2025-06-04 11:47:53] 2025-06-04 15:47:42,714 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-06-04 11:47:53] 2025-06-04 15:47:42,714 | INFO     | collected zombie processes
[2025-06-04 11:47:53] 2025-06-04 15:47:42,714 | INFO     | will attempt to kill all subprocesses of pid=88000
[2025-06-04 11:47:53] 2025-06-04 15:47:42,843 | INFO     | process IDs to be killed: [88000] (in reverse order)
[2025-06-04 11:47:53] 2025-06-04 15:47:42,908 | WARNING  | found no corresponding commands to process id(s)
[2025-06-04 11:47:53] 2025-06-04 15:47:42,908 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-06-04 11:47:53] 2025-06-04 15:47:42,912 | INFO     | did not find any defunct processes belonging to 88000
[2025-06-04 11:47:53] 2025-06-04 15:47:42,916 | INFO     | did not find any defunct processes belonging to 88000
[2025-06-04 11:47:53] 2025-06-04 15:47:42,916 | INFO     | ready for new job
[2025-06-04 11:47:53] 2025-06-04 15:47:42,916 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-06-04 11:47:53] 2025-06-04 15:47:42,917 | INFO     | **************************************
[2025-06-04 11:47:53] 2025-06-04 15:47:42,917 | INFO     | ***  PanDA Pilot version 3.10.2.2  ***
[2025-06-04 11:47:53] 2025-06-04 15:47:42,917 | INFO     | **************************************
[2025-06-04 11:47:53] 2025-06-04 15:47:42,917 | INFO     | 
[2025-06-04 11:47:53] 2025-06-04 15:47:42,920 | INFO     | architecture information:
[2025-06-04 11:47:53] 2025-06-04 15:47:42,920 | INFO     | executing command: cat /etc/os-release
[2025-06-04 11:47:53] 2025-06-04 15:47:42,930 | INFO     | cat /etc/os-release:
[2025-06-04 11:47:53] NAME="CentOS Linux"
[2025-06-04 11:47:53] VERSION="7 (Core)"
[2025-06-04 11:47:53] ID="centos"
[2025-06-04 11:47:53] ID_LIKE="rhel fedora"
[2025-06-04 11:47:53] VERSION_ID="7"
[2025-06-04 11:47:53] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-06-04 11:47:53] ANSI_COLOR="0;31"
[2025-06-04 11:47:53] CPE_NAME="cpe:/o:centos:centos:7"
[2025-06-04 11:47:53] HOME_URL="https://www.centos.org/"
[2025-06-04 11:47:53] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-06-04 11:47:53] 
[2025-06-04 11:47:53] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-06-04 11:47:53] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-06-04 11:47:53] REDHAT_SUPPORT_PRODUCT="centos"
[2025-06-04 11:47:53] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-06-04 11:47:53] 
[2025-06-04 11:47:53] 2025-06-04 15:47:42,930 | INFO     | **************************************
[2025-06-04 11:47:53] 2025-06-04 15:47:43,433 | INFO     | executing command: df -mP /tmp/boinchome/slots/5
[2025-06-04 11:47:53] 2025-06-04 15:47:43,447 | INFO     | sufficient remaining disk space (106082336768 B)
[2025-06-04 11:47:53] 2025-06-04 15:47:43,447 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-06-04 11:47:53] 2025-06-04 15:47:43,447 | INFO     | current server update state: UPDATING_FINAL
[2025-06-04 11:47:53] 2025-06-04 15:47:43,447 | INFO     | update_server=False
[2025-06-04 11:47:53] 2025-06-04 15:47:43,447 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-06-04 11:47:53] 2025-06-04 15:47:43,447 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-06-04 11:47:53] 2025-06-04 15:47:43,447 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-06-04 11:47:53] 2025-06-04 15:47:43,447 | INFO     | aborting loop
[2025-06-04 11:47:53] 2025-06-04 15:47:43,509 | INFO     | found 0 job(s) in 20 queues
[2025-06-04 11:47:53] 2025-06-04 15:47:43,509 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-06-04 11:47:53] 2025-06-04 15:47:43,509 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-06-04 11:47:53] 2025-06-04 15:47:43,553 | INFO     | all data control threads have been joined
[2025-06-04 11:47:53] 2025-06-04 15:47:43,891 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-06-04 11:47:53] 2025-06-04 15:47:43,911 | INFO     | all payload control threads have been joined
[2025-06-04 11:47:53] 2025-06-04 15:47:44,045 | INFO     | all job control threads have been joined
[2025-06-04 11:47:53] 2025-06-04 15:47:44,452 | INFO     | [job] retrieve thread has finished
[2025-06-04 11:47:53] 2025-06-04 15:47:44,452 | INFO     | [job] job monitor thread has finished
[2025-06-04 11:47:53] 2025-06-04 15:47:44,475 | INFO     | [payload] validate_pre thread has finished
[2025-06-04 11:47:53] 2025-06-04 15:47:44,499 | INFO     | [payload] run_realtimelog thread has finished
[2025-06-04 11:47:53] 2025-06-04 15:47:44,512 | INFO     | [payload] failed_post thread has finished
[2025-06-04 11:47:53] 2025-06-04 15:47:44,558 | INFO     | [data] control thread has finished
[2025-06-04 11:47:53] 2025-06-04 15:47:44,916 | INFO     | [payload] control thread has finished
[2025-06-04 11:47:53] 2025-06-04 15:47:45,050 | INFO     | [job] control thread has finished
[2025-06-04 11:47:53] 2025-06-04 15:47:45,052 | INFO     | [payload] validate_post thread has finished
[2025-06-04 11:47:53] 2025-06-04 15:47:45,528 | INFO     | [job] validate thread has finished
[2025-06-04 11:47:53] 2025-06-04 15:47:45,772 | INFO     | [job] create_data_payload thread has finished
[2025-06-04 11:47:53] 2025-06-04 15:47:45,821 | INFO     | [payload] execute_payloads thread has finished
[2025-06-04 11:47:53] 2025-06-04 15:47:45,896 | INFO     | [data] copytool_out thread has finished
[2025-06-04 11:47:53] 2025-06-04 15:47:45,899 | INFO     | [data] copytool_in thread has finished
[2025-06-04 11:47:53] 2025-06-04 15:47:46,365 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-06-04 11:47:53] 2025-06-04 15:47:47,371 | INFO     | [job] queue monitor thread has finished
[2025-06-04 11:47:53] 2025-06-04 15:47:47,453 | INFO     | [data] queue_monitor thread has finished
[2025-06-04 11:47:53] 2025-06-04 15:47:47,758 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140072090322752)>', '<ExcThread(monitor, started 140071432877824)>']
[2025-06-04 11:47:53] 2025-06-04 15:47:48,523 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-06-04 11:47:53] 2025-06-04 15:47:48,523 | INFO     | [monitor] control thread has ended
[2025-06-04 11:47:53] 2025-06-04 15:47:52,779 | INFO     | all workflow threads have been joined
[2025-06-04 11:47:53] 2025-06-04 15:47:52,779 | INFO     | end of generic workflow (traces error code: 0)
[2025-06-04 11:47:53] 2025-06-04 15:47:52,779 | INFO     | traces error code: 0
[2025-06-04 11:47:53] 2025-06-04 15:47:52,779 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-06-04 11:47:53] 2025-06-04 15:47:52,830 [wrapper] ==== pilot stdout END ====
[2025-06-04 11:47:53] 2025-06-04 15:47:52,831 [wrapper] ==== wrapper stdout RESUME ====
[2025-06-04 11:47:53] 2025-06-04 15:47:52,833 [wrapper] pilotpid: 80856
[2025-06-04 11:47:53] 2025-06-04 15:47:52,835 [wrapper] Pilot exit status: 0
[2025-06-04 11:47:53] 2025-06-04 15:47:52,841 [wrapper] pandaids: 6667883773
[2025-06-04 11:47:53] 2025-06-04 15:47:52,895 [wrapper] cleanup supervisor_pilot 65802 80857
[2025-06-04 11:47:53] 2025-06-04 15:47:52,897 [wrapper] Test setup, not cleaning
[2025-06-04 11:47:53] 2025-06-04 15:47:52,898 [wrapper] apfmon messages muted
[2025-06-04 11:47:53] 2025-06-04 15:47:52,900 [wrapper] ==== wrapper stdout END ====
[2025-06-04 11:47:53] 2025-06-04 15:47:52,901 [wrapper] ==== wrapper stderr END ====
[2025-06-04 11:47:53]  *** Error codes and diagnostics ***
[2025-06-04 11:47:53]     "exeErrorCode": 0,
[2025-06-04 11:47:53]     "exeErrorDiag": "",
[2025-06-04 11:47:53]     "pilotErrorCode": 0,
[2025-06-04 11:47:53]     "pilotErrorDiag": "",
[2025-06-04 11:47:53]  *** Listing of results directory ***
[2025-06-04 11:47:53] total 417448
[2025-06-04 11:47:53] -rw-r--r-- 1 boincer umatlas    495897 May 27 21:31 pilot3.tar.gz
[2025-06-04 11:47:53] -rw-r--r-- 1 boincer umatlas      5111 May 27 21:36 queuedata.json
[2025-06-04 11:47:53] -rwx------ 1 boincer umatlas     37140 May 27 21:38 runpilot2-wrapper.sh
[2025-06-04 11:47:53] -rw-r--r-- 1 boincer umatlas       100 Jun  4 10:06 wrapper_26015_x86_64-pc-linux-gnu
[2025-06-04 11:47:53] -rwxr-xr-x 1 boincer umatlas      7986 Jun  4 10:06 run_atlas
[2025-06-04 11:47:53] -rw-r--r-- 1 boincer umatlas       105 Jun  4 10:06 job.xml
[2025-06-04 11:47:53] -rw-r--r-- 2 boincer umatlas 224172642 Jun  4 10:06 EVNT.44871834._003002.pool.root.1
[2025-06-04 11:47:53] -rw-r--r-- 2 boincer umatlas     15093 Jun  4 10:06 start_atlas.sh
[2025-06-04 11:47:53] drwxrwx--x 2 boincer umatlas      4096 Jun  4 10:06 shared
[2025-06-04 11:47:53] -rw-r--r-- 2 boincer umatlas    508869 Jun  4 10:06 input.tar.gz
[2025-06-04 11:47:53] -rw-r--r-- 1 boincer umatlas         0 Jun  4 10:06 boinc_lockfile
[2025-06-04 11:47:53] -rw-r--r-- 1 boincer umatlas      2557 Jun  4 10:06 pandaJob.out
[2025-06-04 11:47:53] -rw------- 1 boincer umatlas    986819 Jun  4 10:06 agis_schedconf.cvmfs.json
[2025-06-04 11:47:53] -rw------- 1 boincer umatlas   1598969 Jun  4 10:06 agis_ddmendpoints.agis.ALL.json
[2025-06-04 11:47:53] drwx------ 4 boincer umatlas      4096 Jun  4 10:06 pilot3
[2025-06-04 11:47:53] -rw-r--r-- 1 boincer umatlas      6388 Jun  4 11:46 init_data.xml
[2025-06-04 11:47:53] -rw------- 1 boincer umatlas 197697257 Jun  4 11:47 HITS.44871837._076734.pool.root.1
[2025-06-04 11:47:53] -rw-r--r-- 1 boincer umatlas       529 Jun  4 11:47 boinc_task_state.xml
[2025-06-04 11:47:53] -rw------- 1 boincer umatlas      1067 Jun  4 11:47 memory_monitor_summary.json
[2025-06-04 11:47:53] -rw------- 1 boincer umatlas    307782 Jun  4 11:47 log.44871837._076734.job.log.tgz.1
[2025-06-04 11:47:53] -rw------- 1 boincer umatlas        95 Jun  4 11:47 pilot_heartbeat.json
[2025-06-04 11:47:53] -rw------- 1 boincer umatlas      7735 Jun  4 11:47 heartbeat.json
[2025-06-04 11:47:53] -rw-r--r-- 1 boincer umatlas        27 Jun  4 11:47 wrapper_checkpoint.txt
[2025-06-04 11:47:53] -rw-r--r-- 1 boincer umatlas      8192 Jun  4 11:47 boinc_mmap_file
[2025-06-04 11:47:53] -rw------- 1 boincer umatlas      4354 Jun  4 11:47 pilotlog.txt
[2025-06-04 11:47:53] -rw------- 1 boincer umatlas    579056 Jun  4 11:47 log.44871837._076734.job.log.1
[2025-06-04 11:47:53] -rw------- 1 boincer umatlas       357 Jun  4 11:47 output.list
[2025-06-04 11:47:53] -rw-r--r-- 1 boincer umatlas       620 Jun  4 11:47 runtime_log
[2025-06-04 11:47:53] -rw------- 1 boincer umatlas    901120 Jun  4 11:47 result.tar.gz
[2025-06-04 11:47:53] -rw------- 1 boincer umatlas       658 Jun  4 11:47 VBYKDmnvKe7n9Rq4apOajLDm4fhM0noT9bVof3QYDm4jSKDmO5rA9m.diag
[2025-06-04 11:47:53] -rw-r--r-- 1 boincer umatlas      8659 Jun  4 11:47 runtime_log.err
[2025-06-04 11:47:53] -rw-r--r-- 1 boincer umatlas     21421 Jun  4 11:47 stderr.txt
[2025-06-04 11:47:53] HITS file was successfully produced:
[2025-06-04 11:47:53] -rw------- 1 boincer umatlas 197697257 Jun  4 11:47 shared/HITS.pool.root.1
[2025-06-04 11:47:53]  *** Contents of shared directory: ***
[2025-06-04 11:47:53] total 413384
[2025-06-04 11:47:53] -rw-r--r-- 2 boincer umatlas 224172642 Jun  4 10:06 ATLAS.root_0
[2025-06-04 11:47:53] -rw-r--r-- 2 boincer umatlas     15093 Jun  4 10:06 start_atlas.sh
[2025-06-04 11:47:53] -rw-r--r-- 2 boincer umatlas    508869 Jun  4 10:06 input.tar.gz
[2025-06-04 11:47:53] -rw------- 1 boincer umatlas 197697257 Jun  4 11:47 HITS.pool.root.1
[2025-06-04 11:47:53] -rw------- 1 boincer umatlas    901120 Jun  4 11:47 result.tar.gz
11:47:54 (75825): run_atlas exited; CPU time 38240.916590
11:47:54 (75825): called boinc_finish(0)

</stderr_txt>
]]>

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