Stderr output

<core_client_version>8.1.0</core_client_version>
<![CDATA[
<stderr_txt>
10:11:46 (3778036): wrapper (7.7.26015): starting
10:11:46 (3778036): wrapper: running run_atlas (--nthreads 8)
[2025-06-04 10:11:46] Arguments: --nthreads 8
[2025-06-04 10:11:46] Threads: 8
[2025-06-04 10:11:46] Checking for CVMFS
[2025-06-04 10:11:47] Probing /cvmfs/atlas.cern.ch... OK
[2025-06-04 10:11:47] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-06-04 10:11:47] Running cvmfs_config stat atlas.cern.ch
[2025-06-04 10:11:47] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-06-04 10:11:47] 2.12.6.0 863165 32902 488908 146781 0 511 25310158 40960001 23496 16776704 1 151980927 99.683 135378608 27642 http://cvmfs-s1fnal.opensciencegrid.org:8000/cvmfs/atlas.cern.ch http://192.41.231.237:6081 1
[2025-06-04 10:11:47] CVMFS is ok
[2025-06-04 10:11:47] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-06-04 10:11:47] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2025-06-04 10:11:47] Further information can be found at the LHC@home message board.
[2025-06-04 10:11:47] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-06-04 10:11:47] Checking for apptainer binary...
[2025-06-04 10:11:47] Using apptainer found in PATH at /usr/bin/apptainer
[2025-06-04 10:11:47] Running /usr/bin/apptainer --version
[2025-06-04 10:11:47] apptainer version 1.4.1-1.el9
[2025-06-04 10:11:47] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-06-04 10:11:47] c7-11-14.aglt2.org
[2025-06-04 10:11:47] apptainer works
[2025-06-04 10:11:47] Set ATHENA_PROC_NUMBER=8
[2025-06-04 10:11:47] Set ATHENA_CORE_NUMBER=8
[2025-06-04 10:11:47] Starting ATLAS job with PandaID=6666850420
[2025-06-04 10:11:47] Running command: /usr/bin/apptainer exec -B /cvmfs,/tmp/boinchome/slots/1 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-06-04 12:22:58]  *** The last 200 lines of the pilot log: ***
[2025-06-04 12:22:58] 2025-06-04 16:22:46,215 | INFO     | using path: /tmp/boinchome/slots/1/PanDA_Pilot-6666850420/memory_monitor_summary.json (trf name=prmon)
[2025-06-04 12:22:58] 2025-06-04 16:22:46,215 | INFO     | extracted standard info from prmon json
[2025-06-04 12:22:58] 2025-06-04 16:22:46,215 | INFO     | extracted standard memory fields from prmon json
[2025-06-04 12:22:58] 2025-06-04 16:22:46,216 | WARNING  | GPU info not found in prmon json: 'gpu'
[2025-06-04 12:22:58] 2025-06-04 16:22:46,216 | WARNING  | format EVNTtoHITS has no such key: dbData
[2025-06-04 12:22:58] 2025-06-04 16:22:46,216 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2025-06-04 12:22:58] 2025-06-04 16:22:46,218 | INFO     | fitting pss+swap vs Time
[2025-06-04 12:22:58] 2025-06-04 16:22:46,218 | INFO     | sum of square deviations: 665610041.9689934
[2025-06-04 12:22:58] 2025-06-04 16:22:46,219 | INFO     | sum of deviations: 36292324963.18605
[2025-06-04 12:22:58] 2025-06-04 16:22:46,219 | INFO     | mean x: 1749050250.015504
[2025-06-04 12:22:58] 2025-06-04 16:22:46,219 | INFO     | mean y: 2083142.9069767443
[2025-06-04 12:22:58] 2025-06-04 16:22:46,219 | INFO     | -- intersect: -95364717307.89131
[2025-06-04 12:22:58] 2025-06-04 16:22:46,219 | INFO     | intersect: -95364717307.89131
[2025-06-04 12:22:58] 2025-06-04 16:22:46,219 | INFO     | chi2: 3.758748297611244
[2025-06-04 12:22:58] 2025-06-04 16:22:46,219 | INFO     | sum of square deviations: 591172046.9677436
[2025-06-04 12:22:58] 2025-06-04 16:22:46,220 | INFO     | sum of deviations: 40615464802.64516
[2025-06-04 12:22:58] 2025-06-04 16:22:46,220 | INFO     | mean x: 1749050097.516129
[2025-06-04 12:22:58] 2025-06-04 16:22:46,220 | INFO     | mean y: 2091533.177419355
[2025-06-04 12:22:58] 2025-06-04 16:22:46,220 | INFO     | -- intersect: -120163405191.6796
[2025-06-04 12:22:58] 2025-06-04 16:22:46,220 | INFO     | intersect: -120163405191.6796
[2025-06-04 12:22:58] 2025-06-04 16:22:46,220 | INFO     | chi2: 3.1210621171796142
[2025-06-04 12:22:58] 2025-06-04 16:22:46,220 | INFO     | current chi2=3.1210621171796142 (change=16.965386611199566 %)
[2025-06-04 12:22:58] 2025-06-04 16:22:46,220 | INFO     | right removable region: 123
[2025-06-04 12:22:58] 2025-06-04 16:22:46,221 | INFO     | sum of square deviations: 591170826.9677436
[2025-06-04 12:22:58] 2025-06-04 16:22:46,221 | INFO     | sum of deviations: 10664479960.48388
[2025-06-04 12:22:58] 2025-06-04 16:22:46,221 | INFO     | mean x: 1749050402.516129
[2025-06-04 12:22:58] 2025-06-04 16:22:46,221 | INFO     | mean y: 2135377.2580645164
[2025-06-04 12:22:58] 2025-06-04 16:22:46,221 | INFO     | -- intersect: -31550018613.803604
[2025-06-04 12:22:58] 2025-06-04 16:22:46,221 | INFO     | intersect: -31550018613.803604
[2025-06-04 12:22:58] 2025-06-04 16:22:46,222 | INFO     | chi2: 1.5177526170323845
[2025-06-04 12:22:58] 2025-06-04 16:22:46,222 | INFO     | current chi2=1.5177526170323845 (change=59.62079668923441 %)
[2025-06-04 12:22:58] 2025-06-04 16:22:46,222 | INFO     | sum of square deviations: 522499161.9663862
[2025-06-04 12:22:58] 2025-06-04 16:22:46,222 | INFO     | sum of deviations: -3695923136.512605
[2025-06-04 12:22:58] 2025-06-04 16:22:46,223 | INFO     | mean x: 1749050555.0168068
[2025-06-04 12:22:58] 2025-06-04 16:22:46,223 | INFO     | mean y: 2167042.756302521
[2025-06-04 12:22:58] 2025-06-04 16:22:46,223 | INFO     | -- intersect: 12374160882.686516
[2025-06-04 12:22:58] 2025-06-04 16:22:46,223 | INFO     | intersect: 12374160882.686516
[2025-06-04 12:22:58] 2025-06-04 16:22:46,223 | INFO     | chi2: 0.8105126704337414
[2025-06-04 12:22:58] 2025-06-04 16:22:46,223 | INFO     | current chi2=0.8105126704337414 (change=46.59784069300357 %)
[2025-06-04 12:22:58] 2025-06-04 16:22:46,223 | INFO     | sum of square deviations: 459362484.4649136
[2025-06-04 12:22:58] 2025-06-04 16:22:46,224 | INFO     | sum of deviations: -5201331593.421053
[2025-06-04 12:22:58] 2025-06-04 16:22:46,224 | INFO     | mean x: 1749050707.5175438
[2025-06-04 12:22:58] 2025-06-04 16:22:46,224 | INFO     | mean y: 2170494.210526316
[2025-06-04 12:22:58] 2025-06-04 16:22:46,224 | INFO     | -- intersect: 19806558120.90909
[2025-06-04 12:22:58] 2025-06-04 16:22:46,224 | INFO     | intersect: 19806558120.90909
[2025-06-04 12:22:58] 2025-06-04 16:22:46,224 | INFO     | chi2: 0.7517456877917859
[2025-06-04 12:22:58] 2025-06-04 16:22:46,224 | INFO     | current chi2=0.7517456877917859 (change=7.2505939494452 %)
[2025-06-04 12:22:58] 2025-06-04 16:22:46,224 | INFO     | left removable region: 30
[2025-06-04 12:22:58] 2025-06-04 16:22:46,224 | INFO     | sum of square deviations: 249383495.9569894
[2025-06-04 12:22:58] 2025-06-04 16:22:46,225 | INFO     | sum of deviations: 3610237943.150537
[2025-06-04 12:22:58] 2025-06-04 16:22:46,225 | INFO     | mean x: 1749050982.0215054
[2025-06-04 12:22:58] 2025-06-04 16:22:46,225 | INFO     | mean y: 2173128.924731183
[2025-06-04 12:22:58] 2025-06-04 16:22:46,225 | INFO     | -- intersect: -25318228269.601624
[2025-06-04 12:22:58] 2025-06-04 16:22:46,225 | INFO     | intersect: -25318228269.601624
[2025-06-04 12:22:58] 2025-06-04 16:22:46,225 | INFO     | chi2: 0.02226929305337578
[2025-06-04 12:22:58] 2025-06-04 16:22:46,225 | INFO     | -- intersect: -25318228269.601624
[2025-06-04 12:22:58] 2025-06-04 16:22:46,225 | INFO     | current memory leak: 14.48 B/s (using 93 data points, chi2=0.02)
[2025-06-04 12:22:58] 2025-06-04 16:22:46,226 | INFO     | ..............................
[2025-06-04 12:22:58] 2025-06-04 16:22:46,226 | INFO     | . Timing measurements:
[2025-06-04 12:22:58] 2025-06-04 16:22:46,226 | INFO     | . get job = 0 s
[2025-06-04 12:22:58] 2025-06-04 16:22:46,226 | INFO     | . initial setup = 2 s
[2025-06-04 12:22:58] 2025-06-04 16:22:46,226 | INFO     | . payload setup = 6 s
[2025-06-04 12:22:58] 2025-06-04 16:22:46,226 | INFO     | . stage-in = 0 s
[2025-06-04 12:22:58] 2025-06-04 16:22:46,226 | INFO     | . payload execution = 7816 s
[2025-06-04 12:22:58] 2025-06-04 16:22:46,226 | INFO     | . stage-out = 0 s
[2025-06-04 12:22:58] 2025-06-04 16:22:46,226 | INFO     | . log creation = 0 s
[2025-06-04 12:22:58] 2025-06-04 16:22:46,226 | INFO     | ..............................
[2025-06-04 12:22:58] 2025-06-04 16:22:46,305 | INFO     | 
[2025-06-04 12:22:58] 2025-06-04 16:22:46,305 | INFO     | job summary report
[2025-06-04 12:22:58] 2025-06-04 16:22:46,305 | INFO     | --------------------------------------------------
[2025-06-04 12:22:58] 2025-06-04 16:22:46,305 | INFO     | PanDA job id: 6666850420
[2025-06-04 12:22:58] 2025-06-04 16:22:46,305 | INFO     | task id: 44871837
[2025-06-04 12:22:58] 2025-06-04 16:22:46,305 | INFO     | errors: (none)
[2025-06-04 12:22:58] 2025-06-04 16:22:46,305 | INFO     | status: LOG_TRANSFER = DONE 
[2025-06-04 12:22:58] 2025-06-04 16:22:46,306 | INFO     | pilot state: finished 
[2025-06-04 12:22:58] 2025-06-04 16:22:46,306 | INFO     | transexitcode: 0
[2025-06-04 12:22:58] 2025-06-04 16:22:46,306 | INFO     | exeerrorcode: 0
[2025-06-04 12:22:58] 2025-06-04 16:22:46,306 | INFO     | exeerrordiag: 
[2025-06-04 12:22:58] 2025-06-04 16:22:46,306 | INFO     | exitcode: 0
[2025-06-04 12:22:58] 2025-06-04 16:22:46,306 | INFO     | exitmsg: OK
[2025-06-04 12:22:58] 2025-06-04 16:22:46,306 | INFO     | cpuconsumptiontime: 41977 s
[2025-06-04 12:22:58] 2025-06-04 16:22:46,306 | INFO     | nevents: 400
[2025-06-04 12:22:58] 2025-06-04 16:22:46,306 | INFO     | neventsw: 0
[2025-06-04 12:22:58] 2025-06-04 16:22:46,306 | INFO     | pid: 3788254
[2025-06-04 12:22:58] 2025-06-04 16:22:46,306 | INFO     | pgrp: 3788254
[2025-06-04 12:22:58] 2025-06-04 16:22:46,306 | INFO     | corecount: 8
[2025-06-04 12:22:58] 2025-06-04 16:22:46,306 | INFO     | event service: False
[2025-06-04 12:22:58] 2025-06-04 16:22:46,306 | INFO     | sizes: {0: 2397392, 5: 2397598, 11: 2397654, 7826: 2425365, 7827: 2425364, 7828: 2434545, 7832: 2434659}
[2025-06-04 12:22:58] 2025-06-04 16:22:46,306 | INFO     | --------------------------------------------------
[2025-06-04 12:22:58] 2025-06-04 16:22:46,306 | INFO     | 
[2025-06-04 12:22:58] 2025-06-04 16:22:46,307 | INFO     | executing command: ls -lF /tmp/boinchome/slots/1
[2025-06-04 12:22:58] 2025-06-04 16:22:46,329 | INFO     | queue jobs had 0 job(s) [purged]
[2025-06-04 12:22:58] 2025-06-04 16:22:46,329 | INFO     | queue payloads had 0 job(s) [purged]
[2025-06-04 12:22:58] 2025-06-04 16:22:46,329 | INFO     | queue data_in had 0 job(s) [purged]
[2025-06-04 12:22:58] 2025-06-04 16:22:46,329 | INFO     | queue data_out had 0 job(s) [purged]
[2025-06-04 12:22:58] 2025-06-04 16:22:46,329 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-06-04 12:22:58] 2025-06-04 16:22:46,329 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-06-04 12:22:58] 2025-06-04 16:22:46,329 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-06-04 12:22:58] 2025-06-04 16:22:46,329 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-06-04 12:22:58] 2025-06-04 16:22:46,330 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-06-04 12:22:58] 2025-06-04 16:22:46,336 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-06-04 12:22:58] 2025-06-04 16:22:46,337 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-06-04 12:22:58] 2025-06-04 16:22:46,337 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-06-04 12:22:58] 2025-06-04 16:22:46,337 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-06-04 12:22:58] 2025-06-04 16:22:46,337 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-06-04 12:22:58] 2025-06-04 16:22:46,337 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-06-04 12:22:58] 2025-06-04 16:22:46,337 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-06-04 12:22:58] 2025-06-04 16:22:46,337 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-06-04 12:22:58] 2025-06-04 16:22:46,337 | INFO     | queue completed_jobids has 1 job(s)
[2025-06-04 12:22:58] 2025-06-04 16:22:46,337 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-06-04 12:22:58] 2025-06-04 16:22:46,337 | INFO     | queue messages had 0 job(s) [purged]
[2025-06-04 12:22:58] 2025-06-04 16:22:46,338 | INFO     | job 6666850420 has completed (purged errors)
[2025-06-04 12:22:58] 2025-06-04 16:22:46,338 | INFO     | overall cleanup function is called
[2025-06-04 12:22:58] 2025-06-04 16:22:47,348 | INFO     | --- collectZombieJob: --- 10, [3788254]
[2025-06-04 12:22:58] 2025-06-04 16:22:47,348 | INFO     | zombie collector waiting for pid 3788254
[2025-06-04 12:22:58] 2025-06-04 16:22:47,348 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-06-04 12:22:58] 2025-06-04 16:22:47,348 | INFO     | collected zombie processes
[2025-06-04 12:22:58] 2025-06-04 16:22:47,348 | INFO     | will attempt to kill all subprocesses of pid=3788254
[2025-06-04 12:22:58] 2025-06-04 16:22:47,682 | INFO     | process IDs to be killed: [3788254] (in reverse order)
[2025-06-04 12:22:58] 2025-06-04 16:22:47,804 | WARNING  | found no corresponding commands to process id(s)
[2025-06-04 12:22:58] 2025-06-04 16:22:47,804 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-06-04 12:22:58] 2025-06-04 16:22:47,824 | INFO     | did not find any defunct processes belonging to 3788254
[2025-06-04 12:22:58] 2025-06-04 16:22:47,843 | INFO     | did not find any defunct processes belonging to 3788254
[2025-06-04 12:22:58] 2025-06-04 16:22:47,844 | INFO     | ready for new job
[2025-06-04 12:22:58] 2025-06-04 16:22:47,844 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-06-04 12:22:58] 2025-06-04 16:22:47,847 | INFO     | **************************************
[2025-06-04 12:22:58] 2025-06-04 16:22:47,847 | INFO     | ***  PanDA Pilot version 3.10.2.2  ***
[2025-06-04 12:22:58] 2025-06-04 16:22:47,847 | INFO     | **************************************
[2025-06-04 12:22:58] 2025-06-04 16:22:47,847 | INFO     | 
[2025-06-04 12:22:58] 2025-06-04 16:22:47,851 | INFO     | architecture information:
[2025-06-04 12:22:58] 2025-06-04 16:22:47,852 | INFO     | executing command: cat /etc/os-release
[2025-06-04 12:22:58] 2025-06-04 16:22:47,871 | INFO     | cat /etc/os-release:
[2025-06-04 12:22:58] NAME="CentOS Linux"
[2025-06-04 12:22:58] VERSION="7 (Core)"
[2025-06-04 12:22:58] ID="centos"
[2025-06-04 12:22:58] ID_LIKE="rhel fedora"
[2025-06-04 12:22:58] VERSION_ID="7"
[2025-06-04 12:22:58] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-06-04 12:22:58] ANSI_COLOR="0;31"
[2025-06-04 12:22:58] CPE_NAME="cpe:/o:centos:centos:7"
[2025-06-04 12:22:58] HOME_URL="https://www.centos.org/"
[2025-06-04 12:22:58] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-06-04 12:22:58] 
[2025-06-04 12:22:58] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-06-04 12:22:58] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-06-04 12:22:58] REDHAT_SUPPORT_PRODUCT="centos"
[2025-06-04 12:22:58] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-06-04 12:22:58] 
[2025-06-04 12:22:58] 2025-06-04 16:22:47,872 | INFO     | **************************************
[2025-06-04 12:22:58] 2025-06-04 16:22:48,375 | INFO     | executing command: df -mP /tmp/boinchome/slots/1
[2025-06-04 12:22:58] 2025-06-04 16:22:48,398 | INFO     | sufficient remaining disk space (86478159872 B)
[2025-06-04 12:22:58] 2025-06-04 16:22:48,398 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-06-04 12:22:58] 2025-06-04 16:22:48,398 | INFO     | current server update state: UPDATING_FINAL
[2025-06-04 12:22:58] 2025-06-04 16:22:48,398 | INFO     | update_server=False
[2025-06-04 12:22:58] 2025-06-04 16:22:48,399 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-06-04 12:22:58] 2025-06-04 16:22:48,399 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-06-04 12:22:58] 2025-06-04 16:22:48,400 | WARNING  | aborting monitor loop since graceful_stop has been set (timing out remaining threads)
[2025-06-04 12:22:58] 2025-06-04 16:22:48,400 | INFO     | found 0 job(s) in 20 queues
[2025-06-04 12:22:58] 2025-06-04 16:22:48,400 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-06-04 12:22:58] 2025-06-04 16:22:48,400 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-06-04 12:22:58] 2025-06-04 16:22:48,486 | INFO     | all job control threads have been joined
[2025-06-04 12:22:58] 2025-06-04 16:22:48,851 | INFO     | all payload control threads have been joined
[2025-06-04 12:22:58] 2025-06-04 16:22:48,956 | INFO     | all data control threads have been joined
[2025-06-04 12:22:58] 2025-06-04 16:22:49,043 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-06-04 12:22:58] 2025-06-04 16:22:49,043 | INFO     | aborting loop
[2025-06-04 12:22:58] 2025-06-04 16:22:49,404 | INFO     | [job] retrieve thread has finished
[2025-06-04 12:22:58] 2025-06-04 16:22:49,415 | INFO     | [payload] validate_pre thread has finished
[2025-06-04 12:22:58] 2025-06-04 16:22:49,477 | INFO     | [data] copytool_in thread has finished
[2025-06-04 12:22:58] 2025-06-04 16:22:49,491 | INFO     | [job] control thread has finished
[2025-06-04 12:22:58] 2025-06-04 16:22:49,515 | INFO     | [job] validate thread has finished
[2025-06-04 12:22:58] 2025-06-04 16:22:49,566 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-06-04 12:22:58] 2025-06-04 16:22:49,575 | INFO     | [payload] validate_post thread has finished
[2025-06-04 12:22:58] 2025-06-04 16:22:49,746 | INFO     | [payload] run_realtimelog thread has finished
[2025-06-04 12:22:58] 2025-06-04 16:22:49,856 | INFO     | [payload] control thread has finished
[2025-06-04 12:22:58] 2025-06-04 16:22:49,962 | INFO     | [data] control thread has finished
[2025-06-04 12:22:58] 2025-06-04 16:22:50,048 | INFO     | [job] job monitor thread has finished
[2025-06-04 12:22:58] 2025-06-04 16:22:50,491 | INFO     | [payload] execute_payloads thread has finished
[2025-06-04 12:22:58] 2025-06-04 16:22:50,718 | INFO     | [job] create_data_payload thread has finished
[2025-06-04 12:22:58] 2025-06-04 16:22:50,942 | INFO     | [payload] failed_post thread has finished
[2025-06-04 12:22:58] 2025-06-04 16:22:51,318 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-06-04 12:22:58] 2025-06-04 16:22:51,571 | INFO     | [data] copytool_out thread has finished
[2025-06-04 12:22:58] 2025-06-04 16:22:52,324 | INFO     | [job] queue monitor thread has finished
[2025-06-04 12:22:58] 2025-06-04 16:22:52,407 | INFO     | [data] queue_monitor thread has finished
[2025-06-04 12:22:58] 2025-06-04 16:22:52,835 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140567912793920)>', '<ExcThread(monitor, started 140567275095808)>']
[2025-06-04 12:22:58] 2025-06-04 16:22:53,427 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-06-04 12:22:58] 2025-06-04 16:22:53,427 | INFO     | [monitor] control thread has ended
[2025-06-04 12:22:58] 2025-06-04 16:22:57,862 | INFO     | all workflow threads have been joined
[2025-06-04 12:22:58] 2025-06-04 16:22:57,862 | INFO     | end of generic workflow (traces error code: 0)
[2025-06-04 12:22:58] 2025-06-04 16:22:57,862 | INFO     | traces error code: 0
[2025-06-04 12:22:58] 2025-06-04 16:22:57,863 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-06-04 12:22:58] 2025-06-04 16:22:58,044 [wrapper] ==== pilot stdout END ====
[2025-06-04 12:22:58] 2025-06-04 16:22:58,047 [wrapper] ==== wrapper stdout RESUME ====
[2025-06-04 12:22:58] 2025-06-04 16:22:58,049 [wrapper] pilotpid: 3781817
[2025-06-04 12:22:58] 2025-06-04 16:22:58,052 [wrapper] Pilot exit status: 0
[2025-06-04 12:22:58] 2025-06-04 16:22:58,066 [wrapper] pandaids: 6666850420
[2025-06-04 12:22:58] 2025-06-04 16:22:58,162 [wrapper] cleanup supervisor_pilot  648927 3781818
[2025-06-04 12:22:58] 2025-06-04 16:22:58,165 [wrapper] Test setup, not cleaning
[2025-06-04 12:22:58] 2025-06-04 16:22:58,167 [wrapper] apfmon messages muted
[2025-06-04 12:22:58] 2025-06-04 16:22:58,170 [wrapper] ==== wrapper stdout END ====
[2025-06-04 12:22:58] 2025-06-04 16:22:58,173 [wrapper] ==== wrapper stderr END ====
[2025-06-04 12:22:58]  *** Error codes and diagnostics ***
[2025-06-04 12:22:58]     "exeErrorCode": 0,
[2025-06-04 12:22:58]     "exeErrorDiag": "",
[2025-06-04 12:22:58]     "pilotErrorCode": 0,
[2025-06-04 12:22:58]     "pilotErrorDiag": "",
[2025-06-04 12:22:58]  *** Listing of results directory ***
[2025-06-04 12:22:58] total 422656
[2025-06-04 12:22:58] -rw-r--r--. 1 boincer umatlas      5111 May 27 04:13 queuedata.json
[2025-06-04 12:22:58] -rw-r--r--. 1 boincer umatlas    495897 May 27 04:13 pilot3.tar.gz
[2025-06-04 12:22:58] -rwx------. 1 boincer umatlas     37140 May 27 04:17 runpilot2-wrapper.sh
[2025-06-04 12:22:58] -rw-r--r--. 1 boincer umatlas       100 Jun  4 10:11 wrapper_26015_x86_64-pc-linux-gnu
[2025-06-04 12:22:58] -rwxr-xr-x. 1 boincer umatlas      7986 Jun  4 10:11 run_atlas
[2025-06-04 12:22:58] -rw-r--r--. 1 boincer umatlas       105 Jun  4 10:11 job.xml
[2025-06-04 12:22:58] -rw-r--r--. 2 boincer umatlas 225474972 Jun  4 10:11 EVNT.44871834._002544.pool.root.1
[2025-06-04 12:22:58] -rw-r--r--. 2 boincer umatlas     15093 Jun  4 10:11 start_atlas.sh
[2025-06-04 12:22:58] drwxrwx--x. 2 boincer umatlas      4096 Jun  4 10:11 shared
[2025-06-04 12:22:58] -rw-r--r--. 2 boincer umatlas    508881 Jun  4 10:11 input.tar.gz
[2025-06-04 12:22:58] -rw-r--r--. 1 boincer umatlas         0 Jun  4 10:11 boinc_lockfile
[2025-06-04 12:22:58] -rw-r--r--. 1 boincer umatlas      2559 Jun  4 10:11 pandaJob.out
[2025-06-04 12:22:58] -rw-------. 1 boincer umatlas    986819 Jun  4 10:11 agis_schedconf.cvmfs.json
[2025-06-04 12:22:58] -rw-------. 1 boincer umatlas   1598969 Jun  4 10:11 agis_ddmendpoints.agis.ALL.json
[2025-06-04 12:22:58] drwx------. 4 boincer umatlas      4096 Jun  4 10:11 pilot3
[2025-06-04 12:22:58] -rw-r--r--. 1 boincer umatlas      6896 Jun  4 12:18 init_data.xml
[2025-06-04 12:22:58] -rw-------. 1 boincer umatlas 201362664 Jun  4 12:22 HITS.44871837._064549.pool.root.1
[2025-06-04 12:22:58] -rw-r--r--. 1 boincer umatlas       529 Jun  4 12:22 boinc_task_state.xml
[2025-06-04 12:22:58] -rw-------. 1 boincer umatlas        95 Jun  4 12:22 pilot_heartbeat.json
[2025-06-04 12:22:58] -rw-------. 1 boincer umatlas      1035 Jun  4 12:22 memory_monitor_summary.json
[2025-06-04 12:22:58] -rw-------. 1 boincer umatlas    328217 Jun  4 12:22 log.44871837._064549.job.log.tgz.1
[2025-06-04 12:22:58] -rw-r--r--. 1 boincer umatlas      8192 Jun  4 12:22 boinc_mmap_file
[2025-06-04 12:22:58] -rw-r--r--. 1 boincer umatlas        27 Jun  4 12:22 wrapper_checkpoint.txt
[2025-06-04 12:22:58] -rw-------. 1 boincer umatlas      7693 Jun  4 12:22 heartbeat.json
[2025-06-04 12:22:58] -rw-------. 1 boincer umatlas      4476 Jun  4 12:22 pilotlog.txt
[2025-06-04 12:22:58] -rw-------. 1 boincer umatlas    734060 Jun  4 12:22 log.44871837._064549.job.log.1
[2025-06-04 12:22:58] -rw-------. 1 boincer umatlas       357 Jun  4 12:22 output.list
[2025-06-04 12:22:58] -rw-r--r--. 1 boincer umatlas       620 Jun  4 12:22 runtime_log
[2025-06-04 12:22:58] -rw-------. 1 boincer umatlas   1085440 Jun  4 12:22 result.tar.gz
[2025-06-04 12:22:58] -rw-------. 1 boincer umatlas       655 Jun  4 12:22 tzFODmkf4d7nsSi4ap6QjLDmwznN0nGgGQJmUXzaDmuvYKDmzrxg5m.diag
[2025-06-04 12:22:58] -rw-r--r--. 1 boincer umatlas      8659 Jun  4 12:22 runtime_log.err
[2025-06-04 12:22:58] -rw-r--r--. 1 boincer umatlas     20929 Jun  4 12:22 stderr.txt
[2025-06-04 12:22:58] HITS file was successfully produced:
[2025-06-04 12:22:58] -rw-------. 1 boincer umatlas 201362664 Jun  4 12:22 shared/HITS.pool.root.1
[2025-06-04 12:22:58]  *** Contents of shared directory: ***
[2025-06-04 12:22:58] total 418420
[2025-06-04 12:22:58] -rw-r--r--. 2 boincer umatlas 225474972 Jun  4 10:11 ATLAS.root_0
[2025-06-04 12:22:58] -rw-r--r--. 2 boincer umatlas     15093 Jun  4 10:11 start_atlas.sh
[2025-06-04 12:22:58] -rw-r--r--. 2 boincer umatlas    508881 Jun  4 10:11 input.tar.gz
[2025-06-04 12:22:58] -rw-------. 1 boincer umatlas 201362664 Jun  4 12:22 HITS.pool.root.1
[2025-06-04 12:22:58] -rw-------. 1 boincer umatlas   1085440 Jun  4 12:22 result.tar.gz
12:22:59 (3778036): run_atlas exited; CPU time 42068.738381
12:22:59 (3778036): called boinc_finish(0)

</stderr_txt>
]]>

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