Stderr output

<core_client_version>7.20.2</core_client_version>
<![CDATA[
<stderr_txt>
11:27:44 (3210756): wrapper (7.7.26015): starting
11:27:44 (3210756): wrapper: running run_atlas (--nthreads 4)
[2025-06-06 11:27:44] Arguments: --nthreads 4
[2025-06-06 11:27:44] Threads: 4
[2025-06-06 11:27:44] Checking for CVMFS
[2025-06-06 11:27:44] No cvmfs_config command found, will try listing directly
[2025-06-06 11:27:44] CVMFS is ok
[2025-06-06 11:27:44] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-06-06 11:27:44] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2025-06-06 11:27:44] Further information can be found at the LHC@home message board.
[2025-06-06 11:27:44] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-06-06 11:27:44] Checking for apptainer binary...
[2025-06-06 11:27:44] which: no apptainer in ((null))
[2025-06-06 11:27:44] apptainer is not installed, using version from CVMFS
[2025-06-06 11:27:44] Checking apptainer works with /cvmfs/atlas.cern.ch/repo/containers/sw/apptainer/x86_64-el7/current/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-06-06 11:27:44] WARNING: Environment variable TMPDIR already has value [/scratch/boinc/var/slot80/slots/0/.apptainertmp], will not forward new value [/tmp] from parent process environment skurut14.grid.cesnet.cz
[2025-06-06 11:27:44] apptainer works
[2025-06-06 11:27:44] Set ATHENA_PROC_NUMBER=4
[2025-06-06 11:27:44] Set ATHENA_CORE_NUMBER=4
[2025-06-06 11:27:44] Starting ATLAS job with PandaID=6679710976
[2025-06-06 11:27:44] Running command: /cvmfs/atlas.cern.ch/repo/containers/sw/apptainer/x86_64-el7/current/bin/apptainer exec -B /cvmfs,/scratch/boinc/var/slot80/slots/0 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-06-06 12:50:07]  *** The last 200 lines of the pilot log: ***
[2025-06-06 12:50:07]  is_altstaged=None
[2025-06-06 12:50:07]  is_tar=False
[2025-06-06 12:50:07]  lfn=log.45006595._056648.job.log.tgz.1
[2025-06-06 12:50:07]  mtime=0
[2025-06-06 12:50:07]  protocol_id=None
[2025-06-06 12:50:07]  protocols=[{'endpoint': 'davs://dav.ndgf.org:443', 'flavour': 'WEBDAV', 'id': 331, 'path': '/atlas/disk/atlasdatadisk/rucio/'}]
[2025-06-06 12:50:07]  replicas=None
[2025-06-06 12:50:07]  scope=mc23_13p6TeV
[2025-06-06 12:50:07]  status=None
[2025-06-06 12:50:07]  status_code=0
[2025-06-06 12:50:07]  storage_token=
[2025-06-06 12:50:07]  surl=/scratch/boinc/var/slot80/slots/0/PanDA_Pilot-6679710976/log.45006595._056648.job.log.tgz.1
[2025-06-06 12:50:07]  turl=davs://dav.ndgf.org:443/atlas/disk/atlasdatadisk/rucio/mc23_13p6TeV/48/15/log.45006595._056648.job.log.tgz.1
[2025-06-06 12:50:07]  workdir=None
[2025-06-06 12:50:07] ]
[2025-06-06 12:50:07] 2025-06-06 10:48:13,332 | INFO     | transferring file log.45006595._056648.job.log.tgz.1 from /scratch/boinc/var/slot80/slots/0/PanDA_Pilot-6679710976/log.45006595._056648.job.log.tgz.1 to /scratch/b
[2025-06-06 12:50:07] 2025-06-06 10:48:13,333 | INFO     | executing command: /usr/bin/env mv /scratch/boinc/var/slot80/slots/0/PanDA_Pilot-6679710976/log.45006595._056648.job.log.tgz.1 /scratch/boinc/var/slot80/slots/0/lo
[2025-06-06 12:50:07] 2025-06-06 10:48:13,352 | INFO     | adding to output.list: log.45006595._056648.job.log.tgz.1 davs://dav.ndgf.org:443/atlas/disk/atlasdatadisk/rucio/mc23_13p6TeV/48/15/log.45006595._056648.job.log.tg
[2025-06-06 12:50:07] 2025-06-06 10:48:13,353 | INFO     | alt stage-out settings: ['pl', 'write_lan', 'w', 'default'], allow_altstageout=False, remain_files=0, has_altstorage=True
[2025-06-06 12:50:07] 2025-06-06 10:48:13,353 | INFO     | summary of transferred files:
[2025-06-06 12:50:07] 2025-06-06 10:48:13,353 | INFO     |  -- lfn=log.45006595._056648.job.log.tgz.1, status_code=0, status=transferred
[2025-06-06 12:50:07] 2025-06-06 10:48:13,353 | INFO     | stage-out finished correctly
[2025-06-06 12:50:07] 2025-06-06 10:48:13,847 | INFO     | finished stage-out for finished payload, adding job to finished_jobs queue
[2025-06-06 12:50:07] 2025-06-06 10:48:14,535 | INFO     | job 6679710976 has state=finished
[2025-06-06 12:50:07] 2025-06-06 10:48:14,536 | INFO     | preparing for final server update for job 6679710976 in state='finished'
[2025-06-06 12:50:07] 2025-06-06 10:48:14,536 | INFO     | this job has now completed (state=finished)
[2025-06-06 12:50:07] 2025-06-06 10:48:14,537 | INFO     | pilot will not update the server (heartbeat message will be written to file)
[2025-06-06 12:50:07] 2025-06-06 10:48:14,537 | INFO     | log transfer has been attempted: DONE
[2025-06-06 12:50:07] 2025-06-06 10:48:14,537 | INFO     | job 6679710976 has finished - writing final server update
[2025-06-06 12:50:07] 2025-06-06 10:48:14,537 | WARNING  | failed to read HTCondor job classAd: [Errno 2] No such file or directory: '/scratch/condor/execute/dir_2743184/.job.ad'
[2025-06-06 12:50:07] 2025-06-06 10:48:14,537 | INFO     | total number of processed events: 400 (read)
[2025-06-06 12:50:07] 2025-06-06 10:48:14,544 | INFO     | executing command: lscpu
[2025-06-06 12:50:07] 2025-06-06 10:48:14,622 | INFO     | executing command: export ATLAS_LOCAL_ROOT_BASE=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase;source ${ATLAS_LOCAL_ROOT_BASE}/user/atlasLocalSetup.sh --quiet;lsetup
[2025-06-06 12:50:07] 2025-06-06 10:48:16,005 | WARNING  | process 3222063 can no longer be monitored (due to stat problems) - aborting
[2025-06-06 12:50:07] 2025-06-06 10:48:16,005 | INFO     | using path: /scratch/boinc/var/slot80/slots/0/PanDA_Pilot-6679710976/memory_monitor_summary.json (trf name=prmon)
[2025-06-06 12:50:07] 2025-06-06 10:48:16,324 | INFO     | number of running child processes to parent process 3222063: 1
[2025-06-06 12:50:07] 2025-06-06 10:48:16,324 | INFO     | maximum number of monitored processes: 6
[2025-06-06 12:50:07] 2025-06-06 10:48:17,677 | INFO     | PID=3214659 has CPU usage=11.5% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i 
[2025-06-06 12:50:07] 2025-06-06 10:48:17,677 | INFO     | .. there are 3 such processes running
[2025-06-06 12:50:07] 2025-06-06 10:48:18,449 | INFO     | CPU arch script returned: x86-64-v3
[2025-06-06 12:50:07] 2025-06-06 10:48:18,450 | INFO     | using path: /scratch/boinc/var/slot80/slots/0/PanDA_Pilot-6679710976/memory_monitor_summary.json (trf name=prmon)
[2025-06-06 12:50:07] 2025-06-06 10:48:18,450 | INFO     | extracted standard info from prmon json
[2025-06-06 12:50:07] 2025-06-06 10:48:18,450 | INFO     | extracted standard memory fields from prmon json
[2025-06-06 12:50:07] 2025-06-06 10:48:18,450 | WARNING  | GPU info not found in prmon json: 'gpu'
[2025-06-06 12:50:07] 2025-06-06 10:48:18,450 | WARNING  | format EVNTtoHITS has no such key: dbData
[2025-06-06 12:50:07] 2025-06-06 10:48:18,451 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2025-06-06 12:50:07] 2025-06-06 10:48:18,452 | INFO     | fitting pss+swap vs Time
[2025-06-06 12:50:07] 2025-06-06 10:48:18,452 | INFO     | sum of square deviations: 115715658.0
[2025-06-06 12:50:07] 2025-06-06 10:48:18,452 | INFO     | sum of deviations: -2336875901.0
[2025-06-06 12:50:07] 2025-06-06 10:48:18,452 | INFO     | mean x: 1749204570.5
[2025-06-06 12:50:07] 2025-06-06 10:48:18,452 | INFO     | mean y: 2406728.111111111
[2025-06-06 12:50:07] 2025-06-06 10:48:18,452 | INFO     | -- intersect: 35327565633.7495
[2025-06-06 12:50:07] 2025-06-06 10:48:18,452 | INFO     | intersect: 35327565633.7495
[2025-06-06 12:50:07] 2025-06-06 10:48:18,452 | INFO     | chi2: 0.03409229748368423
[2025-06-06 12:50:07] 2025-06-06 10:48:18,452 | INFO     | -- intersect: 35327565633.7495
[2025-06-06 12:50:07] 2025-06-06 10:48:18,452 | INFO     | current memory leak: -20.19 B/s (using 72 data points, chi2=0.03)
[2025-06-06 12:50:07] 2025-06-06 10:48:18,453 | INFO     | ..............................
[2025-06-06 12:50:07] 2025-06-06 10:48:18,453 | INFO     | . Timing measurements:
[2025-06-06 12:50:07] 2025-06-06 10:48:18,453 | INFO     | . get job = 0 s
[2025-06-06 12:50:07] 2025-06-06 10:48:18,453 | INFO     | . initial setup = 1 s
[2025-06-06 12:50:07] 2025-06-06 10:48:18,453 | INFO     | . payload setup = 6 s
[2025-06-06 12:50:07] 2025-06-06 10:48:18,453 | INFO     | . stage-in = 0 s
[2025-06-06 12:50:07] 2025-06-06 10:48:18,453 | INFO     | . payload execution = 4794 s
[2025-06-06 12:50:07] 2025-06-06 10:48:18,453 | INFO     | . stage-out = 0 s
[2025-06-06 12:50:07] 2025-06-06 10:48:18,453 | INFO     | . log creation = 0 s
[2025-06-06 12:50:07] 2025-06-06 10:48:18,453 | INFO     | ..............................
[2025-06-06 12:50:07] 2025-06-06 10:48:18,508 | INFO     | 
[2025-06-06 12:50:07] 2025-06-06 10:48:18,509 | INFO     | job summary report
[2025-06-06 12:50:07] 2025-06-06 10:48:18,509 | INFO     | --------------------------------------------------
[2025-06-06 12:50:07] 2025-06-06 10:48:18,509 | INFO     | PanDA job id: 6679710976
[2025-06-06 12:50:07] 2025-06-06 10:48:18,509 | INFO     | task id: 45006595
[2025-06-06 12:50:07] 2025-06-06 10:48:18,509 | INFO     | errors: (none)
[2025-06-06 12:50:07] 2025-06-06 10:48:18,509 | INFO     | status: LOG_TRANSFER = DONE 
[2025-06-06 12:50:07] 2025-06-06 10:48:18,509 | INFO     | pilot state: finished 
[2025-06-06 12:50:07] 2025-06-06 10:48:18,509 | INFO     | transexitcode: 0
[2025-06-06 12:50:07] 2025-06-06 10:48:18,509 | INFO     | exeerrorcode: 0
[2025-06-06 12:50:07] 2025-06-06 10:48:18,509 | INFO     | exeerrordiag: 
[2025-06-06 12:50:07] 2025-06-06 10:48:18,510 | INFO     | exitcode: 0
[2025-06-06 12:50:07] 2025-06-06 10:48:18,510 | INFO     | exitmsg: OK
[2025-06-06 12:50:07] 2025-06-06 10:48:18,510 | INFO     | cpuconsumptiontime: 18268 s
[2025-06-06 12:50:07] 2025-06-06 10:48:18,510 | INFO     | nevents: 400
[2025-06-06 12:50:07] 2025-06-06 10:48:18,510 | INFO     | neventsw: 0
[2025-06-06 12:50:07] 2025-06-06 10:48:18,510 | INFO     | pid: 3222063
[2025-06-06 12:50:07] 2025-06-06 10:48:18,510 | INFO     | pgrp: 3222063
[2025-06-06 12:50:07] 2025-06-06 10:48:18,510 | INFO     | corecount: 4
[2025-06-06 12:50:07] 2025-06-06 10:48:18,510 | INFO     | event service: False
[2025-06-06 12:50:07] 2025-06-06 10:48:18,510 | INFO     | sizes: {0: 2397302, 5: 2397508, 11: 2397564, 4804: 2423754, 4805: 2432773, 4810: 2432887}
[2025-06-06 12:50:07] 2025-06-06 10:48:18,510 | INFO     | --------------------------------------------------
[2025-06-06 12:50:07] 2025-06-06 10:48:18,510 | INFO     | 
[2025-06-06 12:50:07] 2025-06-06 10:48:18,510 | INFO     | executing command: ls -lF /scratch/boinc/var/slot80/slots/0
[2025-06-06 12:50:07] 2025-06-06 10:48:18,531 | INFO     | queue jobs had 0 job(s) [purged]
[2025-06-06 12:50:07] 2025-06-06 10:48:18,532 | INFO     | queue payloads had 0 job(s) [purged]
[2025-06-06 12:50:07] 2025-06-06 10:48:18,532 | INFO     | queue data_in had 0 job(s) [purged]
[2025-06-06 12:50:07] 2025-06-06 10:48:18,532 | INFO     | queue data_out had 0 job(s) [purged]
[2025-06-06 12:50:07] 2025-06-06 10:48:18,532 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-06-06 12:50:07] 2025-06-06 10:48:18,532 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-06-06 12:50:07] 2025-06-06 10:48:18,532 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-06-06 12:50:07] 2025-06-06 10:48:18,532 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-06-06 12:50:07] 2025-06-06 10:48:18,532 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-06-06 12:50:07] 2025-06-06 10:48:18,532 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-06-06 12:50:07] 2025-06-06 10:48:18,532 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-06-06 12:50:07] 2025-06-06 10:48:18,532 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-06-06 12:50:07] 2025-06-06 10:48:18,532 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-06-06 12:50:07] 2025-06-06 10:48:18,532 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-06-06 12:50:07] 2025-06-06 10:48:18,532 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-06-06 12:50:07] 2025-06-06 10:48:18,532 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-06-06 12:50:07] 2025-06-06 10:48:18,532 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-06-06 12:50:07] 2025-06-06 10:48:18,532 | INFO     | queue completed_jobids has 1 job(s)
[2025-06-06 12:50:07] 2025-06-06 10:48:18,532 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-06-06 12:50:07] 2025-06-06 10:48:18,532 | INFO     | queue messages had 0 job(s) [purged]
[2025-06-06 12:50:07] 2025-06-06 10:48:18,532 | INFO     | job 6679710976 has completed (purged errors)
[2025-06-06 12:50:07] 2025-06-06 10:48:18,533 | INFO     | overall cleanup function is called
[2025-06-06 12:50:07] 2025-06-06 10:48:19,539 | INFO     | --- collectZombieJob: --- 10, [3222063]
[2025-06-06 12:50:07] 2025-06-06 10:48:19,539 | INFO     | zombie collector waiting for pid 3222063
[2025-06-06 12:50:07] 2025-06-06 10:48:19,539 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-06-06 12:50:07] 2025-06-06 10:48:19,539 | INFO     | collected zombie processes
[2025-06-06 12:50:07] 2025-06-06 10:48:19,539 | INFO     | will attempt to kill all subprocesses of pid=3222063
[2025-06-06 12:50:07] 2025-06-06 10:48:19,863 | INFO     | process IDs to be killed: [3222063] (in reverse order)
[2025-06-06 12:50:07] 2025-06-06 10:48:19,979 | WARNING  | found no corresponding commands to process id(s)
[2025-06-06 12:50:07] 2025-06-06 10:48:19,979 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-06-06 12:50:07] 2025-06-06 10:48:19,993 | INFO     | did not find any defunct processes belonging to 3222063
[2025-06-06 12:50:07] 2025-06-06 10:48:20,003 | INFO     | did not find any defunct processes belonging to 3222063
[2025-06-06 12:50:07] 2025-06-06 10:48:20,003 | INFO     | ready for new job
[2025-06-06 12:50:07] 2025-06-06 10:48:20,004 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-06-06 12:50:07] 2025-06-06 10:48:20,005 | INFO     | **************************************
[2025-06-06 12:50:07] 2025-06-06 10:48:20,005 | INFO     | ***  PanDA Pilot version 3.10.2.2  ***
[2025-06-06 12:50:07] 2025-06-06 10:48:20,005 | INFO     | **************************************
[2025-06-06 12:50:07] 2025-06-06 10:48:20,005 | INFO     | 
[2025-06-06 12:50:07] 2025-06-06 10:48:20,010 | INFO     | architecture information:
[2025-06-06 12:50:07] 2025-06-06 10:48:20,011 | INFO     | executing command: cat /etc/os-release
[2025-06-06 12:50:07] 2025-06-06 10:48:20,025 | INFO     | cat /etc/os-release:
[2025-06-06 12:50:07] NAME="CentOS Linux"
[2025-06-06 12:50:07] VERSION="7 (Core)"
[2025-06-06 12:50:07] ID="centos"
[2025-06-06 12:50:07] ID_LIKE="rhel fedora"
[2025-06-06 12:50:07] VERSION_ID="7"
[2025-06-06 12:50:07] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-06-06 12:50:07] ANSI_COLOR="0;31"
[2025-06-06 12:50:07] CPE_NAME="cpe:/o:centos:centos:7"
[2025-06-06 12:50:07] HOME_URL="https://www.centos.org/"
[2025-06-06 12:50:07] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-06-06 12:50:07] 
[2025-06-06 12:50:07] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-06-06 12:50:07] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-06-06 12:50:07] REDHAT_SUPPORT_PRODUCT="centos"
[2025-06-06 12:50:07] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-06-06 12:50:07] 
[2025-06-06 12:50:07] 2025-06-06 10:48:20,026 | INFO     | **************************************
[2025-06-06 12:50:07] 2025-06-06 10:48:20,529 | INFO     | executing command: df -mP /scratch/boinc/var/slot80/slots/0
[2025-06-06 12:50:07] 2025-06-06 10:48:20,547 | INFO     | sufficient remaining disk space (3361021624320 B)
[2025-06-06 12:50:07] 2025-06-06 10:48:20,547 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-06-06 12:50:07] 2025-06-06 10:48:20,547 | INFO     | current server update state: UPDATING_FINAL
[2025-06-06 12:50:07] 2025-06-06 10:48:20,548 | INFO     | update_server=False
[2025-06-06 12:50:07] 2025-06-06 10:48:20,548 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-06-06 12:50:07] 2025-06-06 10:48:20,548 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-06-06 12:50:07] 2025-06-06 10:48:20,548 | WARNING  | aborting monitor loop since graceful_stop has been set (timing out remaining threads)
[2025-06-06 12:50:07] 2025-06-06 10:48:20,549 | INFO     | aborting loop
[2025-06-06 12:50:07] 2025-06-06 10:48:20,549 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-06-06 12:50:07] 2025-06-06 10:48:20,549 | INFO     | found 0 job(s) in 20 queues
[2025-06-06 12:50:07] 2025-06-06 10:48:20,550 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-06-06 12:50:07] 2025-06-06 10:48:20,550 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-06-06 12:50:07] 2025-06-06 10:48:21,090 | INFO     | all job control threads have been joined
[2025-06-06 12:50:07] 2025-06-06 10:48:21,280 | INFO     | all data control threads have been joined
[2025-06-06 12:50:07] 2025-06-06 10:48:21,429 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-06-06 12:50:07] 2025-06-06 10:48:21,552 | INFO     | [job] retrieve thread has finished
[2025-06-06 12:50:07] 2025-06-06 10:48:21,555 | INFO     | [job] job monitor thread has finished
[2025-06-06 12:50:07] 2025-06-06 10:48:21,561 | INFO     | [data] copytool_in thread has finished
[2025-06-06 12:50:07] 2025-06-06 10:48:21,582 | INFO     | all payload control threads have been joined
[2025-06-06 12:50:07] 2025-06-06 10:48:21,589 | INFO     | [job] create_data_payload thread has finished
[2025-06-06 12:50:07] 2025-06-06 10:48:21,801 | INFO     | [payload] validate_post thread has finished
[2025-06-06 12:50:07] 2025-06-06 10:48:22,096 | INFO     | [job] control thread has finished
[2025-06-06 12:50:07] 2025-06-06 10:48:22,285 | INFO     | [data] control thread has finished
[2025-06-06 12:50:07] 2025-06-06 10:48:22,377 | INFO     | [payload] failed_post thread has finished
[2025-06-06 12:50:07] 2025-06-06 10:48:22,575 | INFO     | [payload] validate_pre thread has finished
[2025-06-06 12:50:07] 2025-06-06 10:48:22,588 | INFO     | [payload] control thread has finished
[2025-06-06 12:50:07] 2025-06-06 10:48:22,769 | INFO     | [payload] execute_payloads thread has finished
[2025-06-06 12:50:07] 2025-06-06 10:48:22,770 | INFO     | [job] validate thread has finished
[2025-06-06 12:50:07] 2025-06-06 10:48:23,435 | INFO     | [data] copytool_out thread has finished
[2025-06-06 12:50:07] 2025-06-06 10:48:23,520 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-06-06 12:50:07] 2025-06-06 10:48:24,526 | INFO     | [job] queue monitor thread has finished
[2025-06-06 12:50:07] 2025-06-06 10:48:24,556 | INFO     | [data] queue_monitor thread has finished
[2025-06-06 12:50:07] 2025-06-06 10:48:30,791 | INFO     | job.realtimelogging is not enabled
[2025-06-06 12:50:07] 2025-06-06 10:48:31,796 | INFO     | [payload] run_realtimelog thread has finished
[2025-06-06 12:50:07] 2025-06-06 10:48:32,574 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 23051401041728)>', '<ExcThread(monitor, started 23051162846976)>']
[2025-06-06 12:50:07] 2025-06-06 10:48:32,611 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-06-06 12:50:07] 2025-06-06 10:48:32,612 | INFO     | [monitor] control thread has ended
[2025-06-06 12:50:07] 2025-06-06 10:48:37,599 | INFO     | all workflow threads have been joined
[2025-06-06 12:50:07] 2025-06-06 10:48:37,599 | INFO     | end of generic workflow (traces error code: 0)
[2025-06-06 12:50:07] 2025-06-06 10:48:37,600 | INFO     | traces error code: 0
[2025-06-06 12:50:07] 2025-06-06 10:48:37,600 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-06-06 12:50:07] 2025-06-06 10:48:37,710 [wrapper] ==== pilot stdout END ====
[2025-06-06 12:50:07] 2025-06-06 10:48:37,714 [wrapper] ==== wrapper stdout RESUME ====
[2025-06-06 12:50:07] 2025-06-06 10:48:37,717 [wrapper] pilotpid: 3214659
[2025-06-06 12:50:07] 2025-06-06 10:48:37,720 [wrapper] Pilot exit status: 0
[2025-06-06 12:50:07] 2025-06-06 10:48:37,733 [wrapper] pandaids: 6679710976
[2025-06-06 12:50:07] 2025-06-06 10:48:37,818 [wrapper] cleanup supervisor_pilot 3341464 3214660
[2025-06-06 12:50:07] 2025-06-06 10:48:37,821 [wrapper] Test setup, not cleaning
[2025-06-06 12:50:07] 2025-06-06 10:48:37,823 [wrapper] apfmon messages muted
[2025-06-06 12:50:07] 2025-06-06 10:48:37,826 [wrapper] ==== wrapper stdout END ====
[2025-06-06 12:50:07] 2025-06-06 10:48:37,829 [wrapper] ==== wrapper stderr END ====
[2025-06-06 12:50:07]  *** Error codes and diagnostics ***
[2025-06-06 12:50:07]     "exeErrorCode": 0,
[2025-06-06 12:50:07]     "exeErrorDiag": "",
[2025-06-06 12:50:07]     "pilotErrorCode": 0,
[2025-06-06 12:50:07]     "pilotErrorDiag": "",
[2025-06-06 12:50:07]  *** Listing of results directory ***
[2025-06-06 12:50:07] total 385936
[2025-06-06 12:50:07] -rw-r--r-- 1 boinc boinc    495897 Jun  4 14:39 pilot3.tar.gz
[2025-06-06 12:50:07] -rwx------ 1 boinc boinc     37140 Jun  4 15:04 runpilot2-wrapper.sh
[2025-06-06 12:50:07] -rw-r--r-- 1 boinc boinc      5111 Jun  4 15:04 queuedata.json
[2025-06-06 12:50:07] -rw-r--r-- 1 boinc boinc       100 Jun  6 11:27 wrapper_26015_x86_64-pc-linux-gnu
[2025-06-06 12:50:07] -rwxr-xr-x 1 boinc boinc      7986 Jun  6 11:27 run_atlas
[2025-06-06 12:50:07] -rw-r--r-- 1 boinc boinc       105 Jun  6 11:27 job.xml
[2025-06-06 12:50:07] -rw-r--r-- 1 boinc boinc      6687 Jun  6 11:27 init_data.xml
[2025-06-06 12:50:07] -rw-r--r-- 2 boinc boinc 215841734 Jun  6 11:27 EVNT.45006593._001502.pool.root.1
[2025-06-06 12:50:07] -rw-r--r-- 2 boinc boinc     15093 Jun  6 11:27 start_atlas.sh
[2025-06-06 12:50:07] drwxrwx--x 2 boinc boinc      4096 Jun  6 11:27 shared
[2025-06-06 12:50:07] -rw-r--r-- 2 boinc boinc    508879 Jun  6 11:27 input.tar.gz
[2025-06-06 12:50:07] -rw-r--r-- 1 boinc boinc         0 Jun  6 11:27 boinc_lockfile
[2025-06-06 12:50:07] -rw-r--r-- 1 boinc boinc      2524 Jun  6 11:27 pandaJob.out
[2025-06-06 12:50:07] -rw------- 1 boinc boinc    987967 Jun  6 11:27 agis_schedconf.cvmfs.json
[2025-06-06 12:50:07] -rw------- 1 boinc boinc   1598969 Jun  6 11:27 agis_ddmendpoints.agis.ALL.json
[2025-06-06 12:50:07] drwx------ 4 boinc boinc      4096 Jun  6 11:27 pilot3
[2025-06-06 12:50:07] -rw------- 1 boinc boinc        95 Jun  6 12:47 pilot_heartbeat.json
[2025-06-06 12:50:07] -rw------- 1 boinc boinc 174060497 Jun  6 12:47 HITS.45006595._056648.pool.root.1
[2025-06-06 12:50:07] -rw-r--r-- 1 boinc boinc       528 Jun  6 12:48 boinc_task_state.xml
[2025-06-06 12:50:07] -rw------- 1 boinc boinc      1026 Jun  6 12:48 memory_monitor_summary.json
[2025-06-06 12:50:07] -rw------- 1 boinc boinc    251014 Jun  6 12:48 log.45006595._056648.job.log.tgz.1
[2025-06-06 12:50:07] -rw------- 1 boinc boinc      7696 Jun  6 12:48 heartbeat.json
[2025-06-06 12:50:07] -rw------- 1 boinc boinc      4559 Jun  6 12:48 pilotlog.txt
[2025-06-06 12:50:07] -rw------- 1 boinc boinc    476044 Jun  6 12:48 log.45006595._056648.job.log.1
[2025-06-06 12:50:07] -rw------- 1 boinc boinc       357 Jun  6 12:48 output.list
[2025-06-06 12:50:07] -rw-r--r-- 1 boinc boinc       620 Jun  6 12:48 runtime_log
[2025-06-06 12:50:07] -rw------- 1 boinc boinc    747520 Jun  6 12:48 result.tar.gz
[2025-06-06 12:50:07] -rw-r--r-- 1 boinc boinc      9025 Jun  6 12:48 runtime_log.err
[2025-06-06 12:50:07] -rw------- 1 boinc boinc       661 Jun  6 12:48 priMDmay2g7n9Rq4apOajLDm4fhM0noT9bVof3QYDm72aKDmAxZF2n.diag
[2025-06-06 12:50:07] -rw-r--r-- 1 boinc boinc        26 Jun  6 12:49 wrapper_checkpoint.txt
[2025-06-06 12:50:07] -rw-r--r-- 1 boinc boinc      8192 Jun  6 12:50 boinc_mmap_file
[2025-06-06 12:50:07] -rw-r--r-- 1 boinc boinc     21318 Jun  6 12:50 stderr.txt
[2025-06-06 12:50:07] HITS file was successfully produced:
[2025-06-06 12:50:07] -rw------- 1 boinc boinc 174060497 Jun  6 12:47 shared/HITS.pool.root.1
[2025-06-06 12:50:07]  *** Contents of shared directory: ***
[2025-06-06 12:50:07] total 382024
[2025-06-06 12:50:07] -rw-r--r-- 2 boinc boinc 215841734 Jun  6 11:27 ATLAS.root_0
[2025-06-06 12:50:07] -rw-r--r-- 2 boinc boinc     15093 Jun  6 11:27 start_atlas.sh
[2025-06-06 12:50:07] -rw-r--r-- 2 boinc boinc    508879 Jun  6 11:27 input.tar.gz
[2025-06-06 12:50:07] -rw------- 1 boinc boinc 174060497 Jun  6 12:47 HITS.pool.root.1
[2025-06-06 12:50:07] -rw------- 1 boinc boinc    747520 Jun  6 12:48 result.tar.gz
12:50:09 (3210756): run_atlas exited; CPU time 18405.034072
12:50:09 (3210756): called boinc_finish(0)

</stderr_txt>
]]>

©2025 CERN