Stderr output

<core_client_version>8.1.0</core_client_version>
<![CDATA[
<stderr_txt>
10:04:36 (634099): wrapper (7.7.26015): starting
10:04:36 (634099): wrapper: running run_atlas (--nthreads 8)
[2025-06-04 10:04:36] Arguments: --nthreads 8
[2025-06-04 10:04:36] Threads: 8
[2025-06-04 10:04:36] Checking for CVMFS
[2025-06-04 10:04:36] Probing /cvmfs/atlas.cern.ch... OK
[2025-06-04 10:04:36] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-06-04 10:04:36] Running cvmfs_config stat atlas.cern.ch
[2025-06-04 10:04:36] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-06-04 10:04:36] 2.12.6.0 912492 23395 450636 146781 1 605 28948905 40960001 11213 16776704 0 112464275 99.720 81553837 26933 http://cvmfs-s1fnal.opensciencegrid.org:8000/cvmfs/atlas.cern.ch http://192.41.231.237:6081 1
[2025-06-04 10:04:36] CVMFS is ok
[2025-06-04 10:04:36] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-06-04 10:04:36] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2025-06-04 10:04:36] Further information can be found at the LHC@home message board.
[2025-06-04 10:04:36] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-06-04 10:04:36] Checking for apptainer binary...
[2025-06-04 10:04:36] Using apptainer found in PATH at /usr/bin/apptainer
[2025-06-04 10:04:36] Running /usr/bin/apptainer --version
[2025-06-04 10:04:36] apptainer version 1.4.1-1.el9
[2025-06-04 10:04:36] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-06-04 10:04:36] c7-10-12.aglt2.org
[2025-06-04 10:04:36] apptainer works
[2025-06-04 10:04:36] Set ATHENA_PROC_NUMBER=8
[2025-06-04 10:04:36] Set ATHENA_CORE_NUMBER=8
[2025-06-04 10:04:36] Starting ATLAS job with PandaID=6679682788
[2025-06-04 10:04:36] Running command: /usr/bin/apptainer exec -B /cvmfs,/tmp/boinchome/slots/0 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-06-04 11:03:13]  *** The last 200 lines of the pilot log: ***
[2025-06-04 11:03:13]  is_tar=False
[2025-06-04 11:03:13]  lfn=log.45006595._056622.job.log.tgz.1
[2025-06-04 11:03:13]  mtime=0
[2025-06-04 11:03:13]  protocol_id=None
[2025-06-04 11:03:13]  protocols=[{'endpoint': 'davs://dav.ndgf.org:443', 'flavour': 'WEBDAV', 'id': 331, 'path': '/atlas/disk/atlasdatadisk/rucio/'}]
[2025-06-04 11:03:13]  replicas=None
[2025-06-04 11:03:13]  scope=mc23_13p6TeV
[2025-06-04 11:03:13]  status=None
[2025-06-04 11:03:13]  status_code=0
[2025-06-04 11:03:13]  storage_token=
[2025-06-04 11:03:13]  surl=/tmp/boinchome/slots/0/PanDA_Pilot-6679682788/log.45006595._056622.job.log.tgz.1
[2025-06-04 11:03:13]  turl=davs://dav.ndgf.org:443/atlas/disk/atlasdatadisk/rucio/mc23_13p6TeV/4b/c8/log.45006595._056622.job.log.tgz.1
[2025-06-04 11:03:13]  workdir=None
[2025-06-04 11:03:13] ]
[2025-06-04 11:03:13] 2025-06-04 15:02:49,980 | INFO     | transferring file log.45006595._056622.job.log.tgz.1 from /tmp/boinchome/slots/0/PanDA_Pilot-6679682788/log.45006595._056622.job.log.tgz.1 to /tmp/boinchome/slots/
[2025-06-04 11:03:13] 2025-06-04 15:02:49,980 | INFO     | executing command: /usr/bin/env mv /tmp/boinchome/slots/0/PanDA_Pilot-6679682788/log.45006595._056622.job.log.tgz.1 /tmp/boinchome/slots/0/log.45006595._056622.job
[2025-06-04 11:03:13] 2025-06-04 15:02:49,999 | INFO     | adding to output.list: log.45006595._056622.job.log.tgz.1 davs://dav.ndgf.org:443/atlas/disk/atlasdatadisk/rucio/mc23_13p6TeV/4b/c8/log.45006595._056622.job.log.tg
[2025-06-04 11:03:13] 2025-06-04 15:02:49,999 | INFO     | alt stage-out settings: ['pl', 'write_lan', 'w', 'default'], allow_altstageout=False, remain_files=0, has_altstorage=True
[2025-06-04 11:03:13] 2025-06-04 15:02:50,000 | INFO     | summary of transferred files:
[2025-06-04 11:03:13] 2025-06-04 15:02:50,000 | INFO     |  -- lfn=log.45006595._056622.job.log.tgz.1, status_code=0, status=transferred
[2025-06-04 11:03:13] 2025-06-04 15:02:50,000 | INFO     | stage-out finished correctly
[2025-06-04 11:03:13] 2025-06-04 15:02:50,194 | INFO     | finished stage-out for finished payload, adding job to finished_jobs queue
[2025-06-04 11:03:13] 2025-06-04 15:02:50,248 | INFO     | job 6679682788 has state=finished
[2025-06-04 11:03:13] 2025-06-04 15:02:50,248 | INFO     | preparing for final server update for job 6679682788 in state='finished'
[2025-06-04 11:03:13] 2025-06-04 15:02:50,249 | INFO     | this job has now completed (state=finished)
[2025-06-04 11:03:13] 2025-06-04 15:02:50,249 | INFO     | pilot will not update the server (heartbeat message will be written to file)
[2025-06-04 11:03:13] 2025-06-04 15:02:50,249 | INFO     | log transfer has been attempted: DONE
[2025-06-04 11:03:13] 2025-06-04 15:02:50,249 | INFO     | job 6679682788 has finished - writing final server update
[2025-06-04 11:03:13] 2025-06-04 15:02:50,249 | INFO     | total number of processed events: 400 (read)
[2025-06-04 11:03:13] 2025-06-04 15:02:50,266 | INFO     | executing command: lscpu
[2025-06-04 11:03:13] 2025-06-04 15:02:50,329 | INFO     | executing command: export ATLAS_LOCAL_ROOT_BASE=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase;source ${ATLAS_LOCAL_ROOT_BASE}/user/atlasLocalSetup.sh --quiet;lsetup
[2025-06-04 11:03:13] 2025-06-04 15:02:51,396 | INFO     | PID=640215 has CPU usage=7.6% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i PR
[2025-06-04 11:03:13] 2025-06-04 15:02:51,397 | INFO     | .. there are 20 such processes running
[2025-06-04 11:03:13] 2025-06-04 15:02:53,440 | WARNING  | process 656794 can no longer be monitored (due to stat problems) - aborting
[2025-06-04 11:03:13] 2025-06-04 15:02:53,440 | INFO     | using path: /tmp/boinchome/slots/0/PanDA_Pilot-6679682788/memory_monitor_summary.json (trf name=prmon)
[2025-06-04 11:03:13] 2025-06-04 15:02:53,686 | INFO     | number of running child processes to parent process 656794: 1
[2025-06-04 11:03:13] 2025-06-04 15:02:53,687 | INFO     | maximum number of monitored processes: 6
[2025-06-04 11:03:13] 2025-06-04 15:02:53,842 | INFO     | CPU arch script returned: x86-64-v3
[2025-06-04 11:03:13] 2025-06-04 15:02:53,842 | INFO     | using path: /tmp/boinchome/slots/0/PanDA_Pilot-6679682788/memory_monitor_summary.json (trf name=prmon)
[2025-06-04 11:03:13] 2025-06-04 15:02:53,844 | INFO     | extracted standard info from prmon json
[2025-06-04 11:03:13] 2025-06-04 15:02:53,844 | INFO     | extracted standard memory fields from prmon json
[2025-06-04 11:03:13] 2025-06-04 15:02:53,844 | WARNING  | GPU info not found in prmon json: 'gpu'
[2025-06-04 11:03:13] 2025-06-04 15:02:53,844 | WARNING  | format EVNTtoHITS has no such key: dbData
[2025-06-04 11:03:13] 2025-06-04 15:02:53,844 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2025-06-04 11:03:13] 2025-06-04 15:02:53,846 | INFO     | fitting pss+swap vs Time
[2025-06-04 11:03:13] 2025-06-04 15:02:53,847 | INFO     | sum of square deviations: 38744912.5
[2025-06-04 11:03:13] 2025-06-04 15:02:53,847 | INFO     | sum of deviations: 3406928384.9999986
[2025-06-04 11:03:13] 2025-06-04 15:02:53,847 | INFO     | mean x: 1749047713.5
[2025-06-04 11:03:13] 2025-06-04 15:02:53,847 | INFO     | mean y: 2201015.64
[2025-06-04 11:03:13] 2025-06-04 15:02:53,847 | INFO     | -- intersect: -153795547316.93127
[2025-06-04 11:03:13] 2025-06-04 15:02:53,847 | INFO     | intersect: -153795547316.93127
[2025-06-04 11:03:13] 2025-06-04 15:02:53,847 | INFO     | chi2: 0.7909520745649777
[2025-06-04 11:03:13] 2025-06-04 15:02:53,847 | INFO     | -- intersect: -153795547316.93127
[2025-06-04 11:03:13] 2025-06-04 15:02:53,847 | INFO     | current memory leak: 87.93 B/s (using 50 data points, chi2=0.79)
[2025-06-04 11:03:13] 2025-06-04 15:02:53,848 | INFO     | ..............................
[2025-06-04 11:03:13] 2025-06-04 15:02:53,848 | INFO     | . Timing measurements:
[2025-06-04 11:03:13] 2025-06-04 15:02:53,848 | INFO     | . get job = 0 s
[2025-06-04 11:03:13] 2025-06-04 15:02:53,848 | INFO     | . initial setup = 2 s
[2025-06-04 11:03:13] 2025-06-04 15:02:53,848 | INFO     | . payload setup = 6 s
[2025-06-04 11:03:13] 2025-06-04 15:02:53,849 | INFO     | . stage-in = 0 s
[2025-06-04 11:03:13] 2025-06-04 15:02:53,849 | INFO     | . payload execution = 3456 s
[2025-06-04 11:03:13] 2025-06-04 15:02:53,849 | INFO     | . stage-out = 0 s
[2025-06-04 11:03:13] 2025-06-04 15:02:53,849 | INFO     | . log creation = 0 s
[2025-06-04 11:03:13] 2025-06-04 15:02:53,849 | INFO     | ..............................
[2025-06-04 11:03:13] 2025-06-04 15:02:53,934 | INFO     | 
[2025-06-04 11:03:13] 2025-06-04 15:02:53,934 | INFO     | job summary report
[2025-06-04 11:03:13] 2025-06-04 15:02:53,935 | INFO     | --------------------------------------------------
[2025-06-04 11:03:13] 2025-06-04 15:02:53,935 | INFO     | PanDA job id: 6679682788
[2025-06-04 11:03:13] 2025-06-04 15:02:53,935 | INFO     | task id: 45006595
[2025-06-04 11:03:13] 2025-06-04 15:02:53,935 | INFO     | errors: (none)
[2025-06-04 11:03:13] 2025-06-04 15:02:53,935 | INFO     | status: LOG_TRANSFER = DONE 
[2025-06-04 11:03:13] 2025-06-04 15:02:53,935 | INFO     | pilot state: finished 
[2025-06-04 11:03:13] 2025-06-04 15:02:53,935 | INFO     | transexitcode: 0
[2025-06-04 11:03:13] 2025-06-04 15:02:53,935 | INFO     | exeerrorcode: 0
[2025-06-04 11:03:13] 2025-06-04 15:02:53,935 | INFO     | exeerrordiag: 
[2025-06-04 11:03:13] 2025-06-04 15:02:53,935 | INFO     | exitcode: 0
[2025-06-04 11:03:13] 2025-06-04 15:02:53,935 | INFO     | exitmsg: OK
[2025-06-04 11:03:13] 2025-06-04 15:02:53,935 | INFO     | cpuconsumptiontime: 22817 s
[2025-06-04 11:03:13] 2025-06-04 15:02:53,935 | INFO     | nevents: 400
[2025-06-04 11:03:13] 2025-06-04 15:02:53,935 | INFO     | neventsw: 0
[2025-06-04 11:03:13] 2025-06-04 15:02:53,935 | INFO     | pid: 656794
[2025-06-04 11:03:13] 2025-06-04 15:02:53,935 | INFO     | pgrp: 656794
[2025-06-04 11:03:13] 2025-06-04 15:02:53,935 | INFO     | corecount: 8
[2025-06-04 11:03:13] 2025-06-04 15:02:53,935 | INFO     | event service: False
[2025-06-04 11:03:13] 2025-06-04 15:02:53,935 | INFO     | sizes: {0: 2397120, 1: 2397319, 5: 2397525, 11: 2397581, 3467: 2423238, 3468: 2432363, 3472: 2432477}
[2025-06-04 11:03:13] 2025-06-04 15:02:53,935 | INFO     | --------------------------------------------------
[2025-06-04 11:03:13] 2025-06-04 15:02:53,935 | INFO     | 
[2025-06-04 11:03:13] 2025-06-04 15:02:53,936 | INFO     | executing command: ls -lF /tmp/boinchome/slots/0
[2025-06-04 11:03:13] 2025-06-04 15:02:53,955 | INFO     | queue jobs had 0 job(s) [purged]
[2025-06-04 11:03:13] 2025-06-04 15:02:53,957 | INFO     | queue payloads had 0 job(s) [purged]
[2025-06-04 11:03:13] 2025-06-04 15:02:53,957 | INFO     | queue data_in had 0 job(s) [purged]
[2025-06-04 11:03:13] 2025-06-04 15:02:53,957 | INFO     | queue data_out had 0 job(s) [purged]
[2025-06-04 11:03:13] 2025-06-04 15:02:53,957 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-06-04 11:03:13] 2025-06-04 15:02:53,957 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-06-04 11:03:13] 2025-06-04 15:02:53,957 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-06-04 11:03:13] 2025-06-04 15:02:53,957 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-06-04 11:03:13] 2025-06-04 15:02:53,957 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-06-04 11:03:13] 2025-06-04 15:02:53,957 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-06-04 11:03:13] 2025-06-04 15:02:53,957 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-06-04 11:03:13] 2025-06-04 15:02:53,957 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-06-04 11:03:13] 2025-06-04 15:02:53,957 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-06-04 11:03:13] 2025-06-04 15:02:53,957 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-06-04 11:03:13] 2025-06-04 15:02:53,957 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-06-04 11:03:13] 2025-06-04 15:02:53,957 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-06-04 11:03:13] 2025-06-04 15:02:53,957 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-06-04 11:03:13] 2025-06-04 15:02:53,957 | INFO     | queue completed_jobids has 1 job(s)
[2025-06-04 11:03:13] 2025-06-04 15:02:53,958 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-06-04 11:03:13] 2025-06-04 15:02:53,958 | INFO     | queue messages had 0 job(s) [purged]
[2025-06-04 11:03:13] 2025-06-04 15:02:53,958 | INFO     | job 6679682788 has completed (purged errors)
[2025-06-04 11:03:13] 2025-06-04 15:02:53,958 | INFO     | overall cleanup function is called
[2025-06-04 11:03:13] 2025-06-04 15:02:54,965 | INFO     | --- collectZombieJob: --- 10, [656794]
[2025-06-04 11:03:13] 2025-06-04 15:02:54,965 | INFO     | zombie collector waiting for pid 656794
[2025-06-04 11:03:13] 2025-06-04 15:02:54,965 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-06-04 11:03:13] 2025-06-04 15:02:54,965 | INFO     | collected zombie processes
[2025-06-04 11:03:13] 2025-06-04 15:02:54,965 | INFO     | will attempt to kill all subprocesses of pid=656794
[2025-06-04 11:03:13] 2025-06-04 15:02:55,207 | INFO     | process IDs to be killed: [656794] (in reverse order)
[2025-06-04 11:03:13] 2025-06-04 15:02:55,302 | WARNING  | found no corresponding commands to process id(s)
[2025-06-04 11:03:13] 2025-06-04 15:02:55,303 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-06-04 11:03:13] 2025-06-04 15:02:55,315 | INFO     | did not find any defunct processes belonging to 656794
[2025-06-04 11:03:13] 2025-06-04 15:02:55,323 | INFO     | did not find any defunct processes belonging to 656794
[2025-06-04 11:03:13] 2025-06-04 15:02:55,323 | INFO     | ready for new job
[2025-06-04 11:03:13] 2025-06-04 15:02:55,324 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-06-04 11:03:13] 2025-06-04 15:02:55,325 | INFO     | **************************************
[2025-06-04 11:03:13] 2025-06-04 15:02:55,325 | INFO     | ***  PanDA Pilot version 3.10.2.2  ***
[2025-06-04 11:03:13] 2025-06-04 15:02:55,325 | INFO     | **************************************
[2025-06-04 11:03:13] 2025-06-04 15:02:55,325 | INFO     | 
[2025-06-04 11:03:13] 2025-06-04 15:02:55,339 | INFO     | architecture information:
[2025-06-04 11:03:13] 2025-06-04 15:02:55,340 | INFO     | executing command: cat /etc/os-release
[2025-06-04 11:03:13] 2025-06-04 15:02:55,353 | INFO     | cat /etc/os-release:
[2025-06-04 11:03:13] NAME="CentOS Linux"
[2025-06-04 11:03:13] VERSION="7 (Core)"
[2025-06-04 11:03:13] ID="centos"
[2025-06-04 11:03:13] ID_LIKE="rhel fedora"
[2025-06-04 11:03:13] VERSION_ID="7"
[2025-06-04 11:03:13] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-06-04 11:03:13] ANSI_COLOR="0;31"
[2025-06-04 11:03:13] CPE_NAME="cpe:/o:centos:centos:7"
[2025-06-04 11:03:13] HOME_URL="https://www.centos.org/"
[2025-06-04 11:03:13] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-06-04 11:03:13] 
[2025-06-04 11:03:13] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-06-04 11:03:13] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-06-04 11:03:13] REDHAT_SUPPORT_PRODUCT="centos"
[2025-06-04 11:03:13] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-06-04 11:03:13] 
[2025-06-04 11:03:13] 2025-06-04 15:02:55,354 | INFO     | **************************************
[2025-06-04 11:03:13] 2025-06-04 15:02:55,857 | INFO     | executing command: df -mP /tmp/boinchome/slots/0
[2025-06-04 11:03:13] 2025-06-04 15:02:55,875 | INFO     | sufficient remaining disk space (86518005760 B)
[2025-06-04 11:03:13] 2025-06-04 15:02:55,875 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-06-04 11:03:13] 2025-06-04 15:02:55,875 | INFO     | current server update state: UPDATING_FINAL
[2025-06-04 11:03:13] 2025-06-04 15:02:55,875 | INFO     | update_server=False
[2025-06-04 11:03:13] 2025-06-04 15:02:55,875 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-06-04 11:03:13] 2025-06-04 15:02:55,876 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-06-04 11:03:13] 2025-06-04 15:02:55,876 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-06-04 11:03:13] 2025-06-04 15:02:55,876 | WARNING  | aborting monitor loop since graceful_stop has been set (timing out remaining threads)
[2025-06-04 11:03:13] 2025-06-04 15:02:55,877 | INFO     | found 0 job(s) in 20 queues
[2025-06-04 11:03:13] 2025-06-04 15:02:55,877 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-06-04 11:03:13] 2025-06-04 15:02:55,877 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-06-04 11:03:13] 2025-06-04 15:02:56,190 | WARNING  | job monitor detected an abort_job request (signal=args.signal)
[2025-06-04 11:03:13] 2025-06-04 15:02:56,190 | WARNING  | cannot recover job monitoring - aborting pilot
[2025-06-04 11:03:13] 2025-06-04 15:02:56,190 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-06-04 11:03:13] 2025-06-04 15:02:56,190 | INFO     | will abort loop
[2025-06-04 11:03:13] 2025-06-04 15:02:56,253 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-06-04 11:03:13] 2025-06-04 15:02:56,297 | INFO     | all data control threads have been joined
[2025-06-04 11:03:13] 2025-06-04 15:02:56,698 | INFO     | all job control threads have been joined
[2025-06-04 11:03:13] 2025-06-04 15:02:56,750 | INFO     | all payload control threads have been joined
[2025-06-04 11:03:13] 2025-06-04 15:02:56,881 | INFO     | [job] retrieve thread has finished
[2025-06-04 11:03:13] 2025-06-04 15:02:56,882 | INFO     | [job] queue monitor thread has finished
[2025-06-04 11:03:13] 2025-06-04 15:02:57,196 | INFO     | [job] job monitor thread has finished
[2025-06-04 11:03:13] 2025-06-04 15:02:57,276 | INFO     | [job] validate thread has finished
[2025-06-04 11:03:13] 2025-06-04 15:02:57,302 | INFO     | [data] control thread has finished
[2025-06-04 11:03:13] 2025-06-04 15:02:57,331 | INFO     | [data] copytool_in thread has finished
[2025-06-04 11:03:13] 2025-06-04 15:02:57,377 | INFO     | [job] create_data_payload thread has finished
[2025-06-04 11:03:13] 2025-06-04 15:02:57,692 | INFO     | [payload] validate_pre thread has finished
[2025-06-04 11:03:13] 2025-06-04 15:02:57,694 | INFO     | [payload] execute_payloads thread has finished
[2025-06-04 11:03:13] 2025-06-04 15:02:57,703 | INFO     | [job] control thread has finished
[2025-06-04 11:03:13] 2025-06-04 15:02:57,705 | INFO     | [payload] failed_post thread has finished
[2025-06-04 11:03:13] 2025-06-04 15:02:57,756 | INFO     | [payload] control thread has finished
[2025-06-04 11:03:13] 2025-06-04 15:02:57,878 | INFO     | [data] copytool_out thread has finished
[2025-06-04 11:03:13] 2025-06-04 15:02:58,319 | INFO     | [payload] validate_post thread has finished
[2025-06-04 11:03:13] 2025-06-04 15:03:00,259 | INFO     | [data] queue_monitor thread has finished
[2025-06-04 11:03:13] 2025-06-04 15:03:06,767 | INFO     | job.realtimelogging is not enabled
[2025-06-04 11:03:13] 2025-06-04 15:03:07,773 | INFO     | [payload] run_realtimelog thread has finished
[2025-06-04 11:03:13] 2025-06-04 15:03:08,264 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 139742229567296)>', '<ExcThread(monitor, started 139741886392064)>']
[2025-06-04 11:03:13] 2025-06-04 15:03:08,941 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-06-04 11:03:13] 2025-06-04 15:03:08,941 | INFO     | [monitor] control thread has ended
[2025-06-04 11:03:13] 2025-06-04 15:03:13,290 | INFO     | all workflow threads have been joined
[2025-06-04 11:03:13] 2025-06-04 15:03:13,290 | INFO     | end of generic workflow (traces error code: 0)
[2025-06-04 11:03:13] 2025-06-04 15:03:13,290 | INFO     | traces error code: 0
[2025-06-04 11:03:13] 2025-06-04 15:03:13,291 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-06-04 11:03:13] 2025-06-04 15:03:13,425 [wrapper] ==== pilot stdout END ====
[2025-06-04 11:03:13] 2025-06-04 15:03:13,427 [wrapper] ==== wrapper stdout RESUME ====
[2025-06-04 11:03:13] 2025-06-04 15:03:13,430 [wrapper] pilotpid: 640215
[2025-06-04 11:03:13] 2025-06-04 15:03:13,432 [wrapper] Pilot exit status: 0
[2025-06-04 11:03:13] 2025-06-04 15:03:13,442 [wrapper] pandaids: 6679682788
[2025-06-04 11:03:13] 2025-06-04 15:03:13,512 [wrapper] cleanup supervisor_pilot  842782 640216
[2025-06-04 11:03:13] 2025-06-04 15:03:13,515 [wrapper] Test setup, not cleaning
[2025-06-04 11:03:13] 2025-06-04 15:03:13,518 [wrapper] apfmon messages muted
[2025-06-04 11:03:13] 2025-06-04 15:03:13,520 [wrapper] ==== wrapper stdout END ====
[2025-06-04 11:03:13] 2025-06-04 15:03:13,522 [wrapper] ==== wrapper stderr END ====
[2025-06-04 11:03:13]  *** Error codes and diagnostics ***
[2025-06-04 11:03:13]     "exeErrorCode": 0,
[2025-06-04 11:03:13]     "exeErrorDiag": "",
[2025-06-04 11:03:13]     "pilotErrorCode": 0,
[2025-06-04 11:03:13]     "pilotErrorDiag": "",
[2025-06-04 11:03:13]  *** Listing of results directory ***
[2025-06-04 11:03:13] total 393808
[2025-06-04 11:03:13] -rw-r--r--. 1 boincer umatlas    495897 Jun  4 08:18 pilot3.tar.gz
[2025-06-04 11:03:13] -rw-r--r--. 1 boincer umatlas      5111 Jun  4 08:22 queuedata.json
[2025-06-04 11:03:13] -rwx------. 1 boincer umatlas     37140 Jun  4 08:22 runpilot2-wrapper.sh
[2025-06-04 11:03:13] -rw-r--r--. 1 boincer umatlas       100 Jun  4 10:04 wrapper_26015_x86_64-pc-linux-gnu
[2025-06-04 11:03:13] -rwxr-xr-x. 1 boincer umatlas      7986 Jun  4 10:04 run_atlas
[2025-06-04 11:03:13] -rw-r--r--. 1 boincer umatlas       105 Jun  4 10:04 job.xml
[2025-06-04 11:03:13] -rw-r--r--. 2 boincer umatlas 215077866 Jun  4 10:04 EVNT.45006593._001872.pool.root.1
[2025-06-04 11:03:13] -rw-r--r--. 2 boincer umatlas     15093 Jun  4 10:04 start_atlas.sh
[2025-06-04 11:03:13] drwxrwx--x. 2 boincer umatlas      4096 Jun  4 10:04 shared
[2025-06-04 11:03:13] -rw-r--r--. 2 boincer umatlas    508888 Jun  4 10:04 input.tar.gz
[2025-06-04 11:03:13] -rw-r--r--. 1 boincer umatlas         0 Jun  4 10:04 boinc_lockfile
[2025-06-04 11:03:13] -rw-r--r--. 1 boincer umatlas      2524 Jun  4 10:04 pandaJob.out
[2025-06-04 11:03:13] -rw-------. 1 boincer umatlas    986819 Jun  4 10:04 agis_schedconf.cvmfs.json
[2025-06-04 11:03:13] -rw-------. 1 boincer umatlas   1598969 Jun  4 10:04 agis_ddmendpoints.agis.ALL.json
[2025-06-04 11:03:13] drwx------. 4 boincer umatlas      4096 Jun  4 10:04 pilot3
[2025-06-04 11:03:13] -rw-------. 1 boincer umatlas        95 Jun  4 11:01 pilot_heartbeat.json
[2025-06-04 11:03:13] -rw-r--r--. 1 boincer umatlas      6897 Jun  4 11:02 init_data.xml
[2025-06-04 11:03:13] -rw-------. 1 boincer umatlas 183039093 Jun  4 11:02 HITS.45006595._056622.pool.root.1
[2025-06-04 11:03:13] -rw-r--r--. 1 boincer umatlas       530 Jun  4 11:02 boinc_task_state.xml
[2025-06-04 11:03:13] -rw-------. 1 boincer umatlas      1028 Jun  4 11:02 memory_monitor_summary.json
[2025-06-04 11:03:13] -rw-------. 1 boincer umatlas    298844 Jun  4 11:02 log.45006595._056622.job.log.tgz.1
[2025-06-04 11:03:13] -rw-------. 1 boincer umatlas      7688 Jun  4 11:02 heartbeat.json
[2025-06-04 11:03:13] -rw-r--r--. 1 boincer umatlas      8192 Jun  4 11:03 boinc_mmap_file
[2025-06-04 11:03:13] -rw-r--r--. 1 boincer umatlas        27 Jun  4 11:03 wrapper_checkpoint.txt
[2025-06-04 11:03:13] -rw-------. 1 boincer umatlas      4734 Jun  4 11:03 pilotlog.txt
[2025-06-04 11:03:13] -rw-------. 1 boincer umatlas    358437 Jun  4 11:03 log.45006595._056622.job.log.1
[2025-06-04 11:03:13] -rw-------. 1 boincer umatlas       357 Jun  4 11:03 output.list
[2025-06-04 11:03:13] -rw-r--r--. 1 boincer umatlas       620 Jun  4 11:03 runtime_log
[2025-06-04 11:03:13] -rw-------. 1 boincer umatlas    675840 Jun  4 11:03 result.tar.gz
[2025-06-04 11:03:13] -rw-r--r--. 1 boincer umatlas      8659 Jun  4 11:03 runtime_log.err
[2025-06-04 11:03:13] -rw-------. 1 boincer umatlas       651 Jun  4 11:03 38nMDm5J2g7nsSi4ap6QjLDmwznN0nGgGQJmUXzaDmlynKDmvy52Mm.diag
[2025-06-04 11:03:13] -rw-r--r--. 1 boincer umatlas     21527 Jun  4 11:03 stderr.txt
[2025-06-04 11:03:13] HITS file was successfully produced:
[2025-06-04 11:03:13] -rw-------. 1 boincer umatlas 183039093 Jun  4 11:02 shared/HITS.pool.root.1
[2025-06-04 11:03:13]  *** Contents of shared directory: ***
[2025-06-04 11:03:13] total 389972
[2025-06-04 11:03:13] -rw-r--r--. 2 boincer umatlas 215077866 Jun  4 10:04 ATLAS.root_0
[2025-06-04 11:03:13] -rw-r--r--. 2 boincer umatlas     15093 Jun  4 10:04 start_atlas.sh
[2025-06-04 11:03:13] -rw-r--r--. 2 boincer umatlas    508888 Jun  4 10:04 input.tar.gz
[2025-06-04 11:03:13] -rw-------. 1 boincer umatlas 183039093 Jun  4 11:02 HITS.pool.root.1
[2025-06-04 11:03:13] -rw-------. 1 boincer umatlas    675840 Jun  4 11:03 result.tar.gz
11:03:14 (634099): run_atlas exited; CPU time 22834.242940
11:03:14 (634099): called boinc_finish(0)

</stderr_txt>
]]>

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