Stderr output

<core_client_version>8.1.0</core_client_version>
<![CDATA[
<stderr_txt>
10:04:07 (3052422): wrapper (7.7.26015): starting
10:04:07 (3052422): wrapper: running run_atlas (--nthreads 8)
[2025-06-04 10:04:07] Arguments: --nthreads 8
[2025-06-04 10:04:07] Threads: 8
[2025-06-04 10:04:07] Checking for CVMFS
[2025-06-04 10:04:07] Probing /cvmfs/atlas.cern.ch... OK
[2025-06-04 10:04:07] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-06-04 10:04:07] Running cvmfs_config stat atlas.cern.ch
[2025-06-04 10:04:07] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-06-04 10:04:07] 2.12.6.0 851069 32895 445628 146781 1 209 40296428 40960000 8197 16776704 1 153849949 99.667 136669582 24179 http://cvmfs-s1fnal.opensciencegrid.org:8000/cvmfs/atlas.cern.ch http://192.41.231.237:6081 1
[2025-06-04 10:04:07] CVMFS is ok
[2025-06-04 10:04:07] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-06-04 10:04:07] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2025-06-04 10:04:07] Further information can be found at the LHC@home message board.
[2025-06-04 10:04:07] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-06-04 10:04:07] Checking for apptainer binary...
[2025-06-04 10:04:07] Using apptainer found in PATH at /usr/bin/apptainer
[2025-06-04 10:04:07] Running /usr/bin/apptainer --version
[2025-06-04 10:04:07] apptainer version 1.4.1-1.el9
[2025-06-04 10:04:07] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-06-04 10:04:07] c7-11-11.aglt2.org
[2025-06-04 10:04:07] apptainer works
[2025-06-04 10:04:07] Set ATHENA_PROC_NUMBER=8
[2025-06-04 10:04:07] Set ATHENA_CORE_NUMBER=8
[2025-06-04 10:04:07] Starting ATLAS job with PandaID=6679691322
[2025-06-04 10:04:07] Running command: /usr/bin/apptainer exec -B /cvmfs,/tmp/boinchome/slots/1 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-06-04 11:15:07]  *** The last 200 lines of the pilot log: ***
[2025-06-04 11:15:07]  filetype=log
[2025-06-04 11:15:07]  guid=f8574218-90d9-438c-b9c0-f3ab28194f47
[2025-06-04 11:15:07]  inputddms=['NDGF-T1_DATADISK', 'CERN-PROD_DATADISK']
[2025-06-04 11:15:07]  is_altstaged=None
[2025-06-04 11:15:07]  is_tar=False
[2025-06-04 11:15:07]  lfn=log.44871837._102215.job.log.tgz.1
[2025-06-04 11:15:07]  mtime=0
[2025-06-04 11:15:07]  protocol_id=None
[2025-06-04 11:15:07]  protocols=[{'endpoint': 'davs://dav.ndgf.org:443', 'flavour': 'WEBDAV', 'id': 331, 'path': '/atlas/disk/atlasdatadisk/rucio/'}]
[2025-06-04 11:15:07]  replicas=None
[2025-06-04 11:15:07]  scope=mc23_13p6TeV
[2025-06-04 11:15:07]  status=None
[2025-06-04 11:15:07]  status_code=0
[2025-06-04 11:15:07]  storage_token=
[2025-06-04 11:15:07]  surl=/tmp/boinchome/slots/1/PanDA_Pilot-6679691322/log.44871837._102215.job.log.tgz.1
[2025-06-04 11:15:07]  turl=davs://dav.ndgf.org:443/atlas/disk/atlasdatadisk/rucio/mc23_13p6TeV/76/ea/log.44871837._102215.job.log.tgz.1
[2025-06-04 11:15:07]  workdir=None
[2025-06-04 11:15:07] ]
[2025-06-04 11:15:07] 2025-06-04 15:14:42,906 | INFO     | transferring file log.44871837._102215.job.log.tgz.1 from /tmp/boinchome/slots/1/PanDA_Pilot-6679691322/log.44871837._102215.job.log.tgz.1 to /tmp/boinchome/slots/
[2025-06-04 11:15:07] 2025-06-04 15:14:42,906 | INFO     | executing command: /usr/bin/env mv /tmp/boinchome/slots/1/PanDA_Pilot-6679691322/log.44871837._102215.job.log.tgz.1 /tmp/boinchome/slots/1/log.44871837._102215.job
[2025-06-04 11:15:07] 2025-06-04 15:14:42,923 | INFO     | adding to output.list: log.44871837._102215.job.log.tgz.1 davs://dav.ndgf.org:443/atlas/disk/atlasdatadisk/rucio/mc23_13p6TeV/76/ea/log.44871837._102215.job.log.tg
[2025-06-04 11:15:07] 2025-06-04 15:14:42,924 | INFO     | alt stage-out settings: ['pl', 'write_lan', 'w', 'default'], allow_altstageout=False, remain_files=0, has_altstorage=True
[2025-06-04 11:15:07] 2025-06-04 15:14:42,924 | INFO     | summary of transferred files:
[2025-06-04 11:15:07] 2025-06-04 15:14:42,924 | INFO     |  -- lfn=log.44871837._102215.job.log.tgz.1, status_code=0, status=transferred
[2025-06-04 11:15:07] 2025-06-04 15:14:42,924 | INFO     | stage-out finished correctly
[2025-06-04 11:15:07] 2025-06-04 15:14:42,976 | INFO     | finished stage-out for finished payload, adding job to finished_jobs queue
[2025-06-04 11:15:07] 2025-06-04 15:14:44,917 | INFO     | job 6679691322 has state=finished
[2025-06-04 11:15:07] 2025-06-04 15:14:44,917 | INFO     | preparing for final server update for job 6679691322 in state='finished'
[2025-06-04 11:15:07] 2025-06-04 15:14:44,918 | INFO     | this job has now completed (state=finished)
[2025-06-04 11:15:07] 2025-06-04 15:14:44,918 | INFO     | pilot will not update the server (heartbeat message will be written to file)
[2025-06-04 11:15:07] 2025-06-04 15:14:44,918 | INFO     | log transfer has been attempted: DONE
[2025-06-04 11:15:07] 2025-06-04 15:14:44,918 | INFO     | job 6679691322 has finished - writing final server update
[2025-06-04 11:15:07] 2025-06-04 15:14:44,918 | INFO     | total number of processed events: 400 (read)
[2025-06-04 11:15:07] 2025-06-04 15:14:44,935 | INFO     | executing command: lscpu
[2025-06-04 11:15:07] 2025-06-04 15:14:45,004 | INFO     | executing command: export ATLAS_LOCAL_ROOT_BASE=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase;source ${ATLAS_LOCAL_ROOT_BASE}/user/atlasLocalSetup.sh --quiet;lsetup
[2025-06-04 11:15:07] 2025-06-04 15:14:47,080 | WARNING  | process 3066869 can no longer be monitored (due to stat problems) - aborting
[2025-06-04 11:15:07] 2025-06-04 15:14:47,080 | INFO     | using path: /tmp/boinchome/slots/1/PanDA_Pilot-6679691322/memory_monitor_summary.json (trf name=prmon)
[2025-06-04 11:15:07] 2025-06-04 15:14:47,299 | INFO     | number of running child processes to parent process 3066869: 1
[2025-06-04 11:15:07] 2025-06-04 15:14:47,299 | INFO     | maximum number of monitored processes: 6
[2025-06-04 11:15:07] 2025-06-04 15:14:48,412 | INFO     | CPU arch script returned: x86-64-v3
[2025-06-04 11:15:07] 2025-06-04 15:14:48,413 | INFO     | using path: /tmp/boinchome/slots/1/PanDA_Pilot-6679691322/memory_monitor_summary.json (trf name=prmon)
[2025-06-04 11:15:07] 2025-06-04 15:14:48,413 | INFO     | extracted standard info from prmon json
[2025-06-04 11:15:07] 2025-06-04 15:14:48,413 | INFO     | extracted standard memory fields from prmon json
[2025-06-04 11:15:07] 2025-06-04 15:14:48,413 | WARNING  | GPU info not found in prmon json: 'gpu'
[2025-06-04 11:15:07] 2025-06-04 15:14:48,414 | WARNING  | format EVNTtoHITS has no such key: dbData
[2025-06-04 11:15:07] 2025-06-04 15:14:48,414 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2025-06-04 11:15:07] 2025-06-04 15:14:48,414 | INFO     | fitting pss+swap vs Time
[2025-06-04 11:15:07] 2025-06-04 15:14:48,415 | INFO     | sum of square deviations: 73882315.5
[2025-06-04 11:15:07] 2025-06-04 15:14:48,415 | INFO     | sum of deviations: 2279422166.4999995
[2025-06-04 11:15:07] 2025-06-04 15:14:48,415 | INFO     | mean x: 1749048046.5
[2025-06-04 11:15:07] 2025-06-04 15:14:48,415 | INFO     | mean y: 2235618.8225806453
[2025-06-04 11:15:07] 2025-06-04 15:14:48,415 | INFO     | -- intersect: -53959512337.83996
[2025-06-04 11:15:07] 2025-06-04 15:14:48,415 | INFO     | intersect: -53959512337.83996
[2025-06-04 11:15:07] 2025-06-04 15:14:48,415 | INFO     | chi2: 0.6734537220633622
[2025-06-04 11:15:07] 2025-06-04 15:14:48,415 | INFO     | -- intersect: -53959512337.83996
[2025-06-04 11:15:07] 2025-06-04 15:14:48,415 | INFO     | current memory leak: 30.85 B/s (using 62 data points, chi2=0.67)
[2025-06-04 11:15:07] 2025-06-04 15:14:48,415 | INFO     | ..............................
[2025-06-04 11:15:07] 2025-06-04 15:14:48,416 | INFO     | . Timing measurements:
[2025-06-04 11:15:07] 2025-06-04 15:14:48,416 | INFO     | . get job = 0 s
[2025-06-04 11:15:07] 2025-06-04 15:14:48,416 | INFO     | . initial setup = 2 s
[2025-06-04 11:15:07] 2025-06-04 15:14:48,416 | INFO     | . payload setup = 5 s
[2025-06-04 11:15:07] 2025-06-04 15:14:48,416 | INFO     | . stage-in = 0 s
[2025-06-04 11:15:07] 2025-06-04 15:14:48,416 | INFO     | . payload execution = 4201 s
[2025-06-04 11:15:07] 2025-06-04 15:14:48,416 | INFO     | . stage-out = 0 s
[2025-06-04 11:15:07] 2025-06-04 15:14:48,416 | INFO     | . log creation = 0 s
[2025-06-04 11:15:07] 2025-06-04 15:14:48,416 | INFO     | ..............................
[2025-06-04 11:15:07] 2025-06-04 15:14:48,471 | INFO     | 
[2025-06-04 11:15:07] 2025-06-04 15:14:48,471 | INFO     | job summary report
[2025-06-04 11:15:07] 2025-06-04 15:14:48,471 | INFO     | --------------------------------------------------
[2025-06-04 11:15:07] 2025-06-04 15:14:48,471 | INFO     | PanDA job id: 6679691322
[2025-06-04 11:15:07] 2025-06-04 15:14:48,472 | INFO     | task id: 44871837
[2025-06-04 11:15:07] 2025-06-04 15:14:48,472 | INFO     | errors: (none)
[2025-06-04 11:15:07] 2025-06-04 15:14:48,472 | INFO     | status: LOG_TRANSFER = DONE 
[2025-06-04 11:15:07] 2025-06-04 15:14:48,472 | INFO     | pilot state: finished 
[2025-06-04 11:15:07] 2025-06-04 15:14:48,472 | INFO     | transexitcode: 0
[2025-06-04 11:15:07] 2025-06-04 15:14:48,472 | INFO     | exeerrorcode: 0
[2025-06-04 11:15:07] 2025-06-04 15:14:48,472 | INFO     | exeerrordiag: 
[2025-06-04 11:15:07] 2025-06-04 15:14:48,472 | INFO     | exitcode: 0
[2025-06-04 11:15:07] 2025-06-04 15:14:48,472 | INFO     | exitmsg: OK
[2025-06-04 11:15:07] 2025-06-04 15:14:48,472 | INFO     | cpuconsumptiontime: 28760 s
[2025-06-04 11:15:07] 2025-06-04 15:14:48,472 | INFO     | nevents: 400
[2025-06-04 11:15:07] 2025-06-04 15:14:48,472 | INFO     | neventsw: 0
[2025-06-04 11:15:07] 2025-06-04 15:14:48,472 | INFO     | pid: 3066869
[2025-06-04 11:15:07] 2025-06-04 15:14:48,472 | INFO     | pgrp: 3066869
[2025-06-04 11:15:07] 2025-06-04 15:14:48,472 | INFO     | corecount: 8
[2025-06-04 11:15:07] 2025-06-04 15:14:48,472 | INFO     | event service: False
[2025-06-04 11:15:07] 2025-06-04 15:14:48,472 | INFO     | sizes: {0: 2397341, 4: 2397547, 11: 2397575, 4210: 2423549, 4211: 2432546, 4216: 2432660}
[2025-06-04 11:15:07] 2025-06-04 15:14:48,472 | INFO     | --------------------------------------------------
[2025-06-04 11:15:07] 2025-06-04 15:14:48,472 | INFO     | 
[2025-06-04 11:15:07] 2025-06-04 15:14:48,472 | INFO     | executing command: ls -lF /tmp/boinchome/slots/1
[2025-06-04 11:15:07] 2025-06-04 15:14:48,490 | INFO     | queue jobs had 0 job(s) [purged]
[2025-06-04 11:15:07] 2025-06-04 15:14:48,490 | INFO     | queue payloads had 0 job(s) [purged]
[2025-06-04 11:15:07] 2025-06-04 15:14:48,490 | INFO     | queue data_in had 0 job(s) [purged]
[2025-06-04 11:15:07] 2025-06-04 15:14:48,490 | INFO     | queue data_out had 0 job(s) [purged]
[2025-06-04 11:15:07] 2025-06-04 15:14:48,490 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-06-04 11:15:07] 2025-06-04 15:14:48,490 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-06-04 11:15:07] 2025-06-04 15:14:48,490 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-06-04 11:15:07] 2025-06-04 15:14:48,490 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-06-04 11:15:07] 2025-06-04 15:14:48,490 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-06-04 11:15:07] 2025-06-04 15:14:48,490 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-06-04 11:15:07] 2025-06-04 15:14:48,490 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-06-04 11:15:07] 2025-06-04 15:14:48,491 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-06-04 11:15:07] 2025-06-04 15:14:48,491 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-06-04 11:15:07] 2025-06-04 15:14:48,491 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-06-04 11:15:07] 2025-06-04 15:14:48,491 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-06-04 11:15:07] 2025-06-04 15:14:48,491 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-06-04 11:15:07] 2025-06-04 15:14:48,491 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-06-04 11:15:07] 2025-06-04 15:14:48,491 | INFO     | queue completed_jobids has 1 job(s)
[2025-06-04 11:15:07] 2025-06-04 15:14:48,491 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-06-04 11:15:07] 2025-06-04 15:14:48,491 | INFO     | queue messages had 0 job(s) [purged]
[2025-06-04 11:15:07] 2025-06-04 15:14:48,491 | INFO     | job 6679691322 has completed (purged errors)
[2025-06-04 11:15:07] 2025-06-04 15:14:48,491 | INFO     | overall cleanup function is called
[2025-06-04 11:15:07] 2025-06-04 15:14:49,497 | INFO     | --- collectZombieJob: --- 10, [3066869]
[2025-06-04 11:15:07] 2025-06-04 15:14:49,498 | INFO     | zombie collector waiting for pid 3066869
[2025-06-04 11:15:07] 2025-06-04 15:14:49,498 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-06-04 11:15:07] 2025-06-04 15:14:49,498 | INFO     | collected zombie processes
[2025-06-04 11:15:07] 2025-06-04 15:14:49,498 | INFO     | will attempt to kill all subprocesses of pid=3066869
[2025-06-04 11:15:07] 2025-06-04 15:14:49,718 | INFO     | process IDs to be killed: [3066869] (in reverse order)
[2025-06-04 11:15:07] 2025-06-04 15:14:49,808 | WARNING  | found no corresponding commands to process id(s)
[2025-06-04 11:15:07] 2025-06-04 15:14:49,808 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-06-04 11:15:07] 2025-06-04 15:14:49,819 | INFO     | did not find any defunct processes belonging to 3066869
[2025-06-04 11:15:07] 2025-06-04 15:14:49,827 | INFO     | did not find any defunct processes belonging to 3066869
[2025-06-04 11:15:07] 2025-06-04 15:14:49,827 | INFO     | ready for new job
[2025-06-04 11:15:07] 2025-06-04 15:14:49,827 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-06-04 11:15:07] 2025-06-04 15:14:49,828 | INFO     | **************************************
[2025-06-04 11:15:07] 2025-06-04 15:14:49,828 | INFO     | ***  PanDA Pilot version 3.10.2.2  ***
[2025-06-04 11:15:07] 2025-06-04 15:14:49,829 | INFO     | **************************************
[2025-06-04 11:15:07] 2025-06-04 15:14:49,829 | INFO     | 
[2025-06-04 11:15:07] 2025-06-04 15:14:49,844 | INFO     | architecture information:
[2025-06-04 11:15:07] 2025-06-04 15:14:49,844 | INFO     | executing command: cat /etc/os-release
[2025-06-04 11:15:07] 2025-06-04 15:14:49,857 | INFO     | cat /etc/os-release:
[2025-06-04 11:15:07] NAME="CentOS Linux"
[2025-06-04 11:15:07] VERSION="7 (Core)"
[2025-06-04 11:15:07] ID="centos"
[2025-06-04 11:15:07] ID_LIKE="rhel fedora"
[2025-06-04 11:15:07] VERSION_ID="7"
[2025-06-04 11:15:07] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-06-04 11:15:07] ANSI_COLOR="0;31"
[2025-06-04 11:15:07] CPE_NAME="cpe:/o:centos:centos:7"
[2025-06-04 11:15:07] HOME_URL="https://www.centos.org/"
[2025-06-04 11:15:07] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-06-04 11:15:07] 
[2025-06-04 11:15:07] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-06-04 11:15:07] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-06-04 11:15:07] REDHAT_SUPPORT_PRODUCT="centos"
[2025-06-04 11:15:07] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-06-04 11:15:07] 
[2025-06-04 11:15:07] 2025-06-04 15:14:49,857 | INFO     | **************************************
[2025-06-04 11:15:07] 2025-06-04 15:14:50,360 | INFO     | executing command: df -mP /tmp/boinchome/slots/1
[2025-06-04 11:15:07] 2025-06-04 15:14:50,379 | INFO     | sufficient remaining disk space (86502277120 B)
[2025-06-04 11:15:07] 2025-06-04 15:14:50,379 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-06-04 11:15:07] 2025-06-04 15:14:50,379 | INFO     | current server update state: UPDATING_FINAL
[2025-06-04 11:15:07] 2025-06-04 15:14:50,379 | INFO     | update_server=False
[2025-06-04 11:15:07] 2025-06-04 15:14:50,379 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-06-04 11:15:07] 2025-06-04 15:14:50,379 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-06-04 11:15:07] 2025-06-04 15:14:50,380 | WARNING  | aborting monitor loop since graceful_stop has been set (timing out remaining threads)
[2025-06-04 11:15:07] 2025-06-04 15:14:50,380 | INFO     | found 0 job(s) in 20 queues
[2025-06-04 11:15:07] 2025-06-04 15:14:50,380 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-06-04 11:15:07] 2025-06-04 15:14:50,381 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-06-04 11:15:07] 2025-06-04 15:14:50,522 | INFO     | all payload control threads have been joined
[2025-06-04 11:15:07] 2025-06-04 15:14:50,806 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-06-04 11:15:07] 2025-06-04 15:14:50,807 | INFO     | aborting loop
[2025-06-04 11:15:07] 2025-06-04 15:14:50,986 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-06-04 11:15:07] 2025-06-04 15:14:51,007 | INFO     | all data control threads have been joined
[2025-06-04 11:15:07] 2025-06-04 15:14:51,385 | INFO     | [job] retrieve thread has finished
[2025-06-04 11:15:07] 2025-06-04 15:14:51,385 | INFO     | [job] queue monitor thread has finished
[2025-06-04 11:15:07] 2025-06-04 15:14:51,526 | INFO     | [payload] control thread has finished
[2025-06-04 11:15:07] 2025-06-04 15:14:51,626 | INFO     | all job control threads have been joined
[2025-06-04 11:15:07] 2025-06-04 15:14:51,807 | INFO     | [job] job monitor thread has finished
[2025-06-04 11:15:07] 2025-06-04 15:14:51,891 | INFO     | [payload] execute_payloads thread has finished
[2025-06-04 11:15:07] 2025-06-04 15:14:52,012 | INFO     | [data] control thread has finished
[2025-06-04 11:15:07] 2025-06-04 15:14:52,356 | INFO     | [job] create_data_payload thread has finished
[2025-06-04 11:15:07] 2025-06-04 15:14:52,367 | INFO     | [job] validate thread has finished
[2025-06-04 11:15:07] 2025-06-04 15:14:52,419 | INFO     | [payload] validate_pre thread has finished
[2025-06-04 11:15:07] 2025-06-04 15:14:52,590 | INFO     | [payload] failed_post thread has finished
[2025-06-04 11:15:07] 2025-06-04 15:14:52,632 | INFO     | [job] control thread has finished
[2025-06-04 11:15:07] 2025-06-04 15:14:52,858 | INFO     | [data] copytool_in thread has finished
[2025-06-04 11:15:07] 2025-06-04 15:14:52,974 | INFO     | [payload] validate_post thread has finished
[2025-06-04 11:15:07] 2025-06-04 15:14:52,991 | INFO     | [data] copytool_out thread has finished
[2025-06-04 11:15:07] 2025-06-04 15:14:53,542 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-06-04 11:15:07] 2025-06-04 15:14:57,548 | INFO     | [data] queue_monitor thread has finished
[2025-06-04 11:15:07] 2025-06-04 15:15:00,710 | INFO     | job.realtimelogging is not enabled
[2025-06-04 11:15:07] 2025-06-04 15:15:01,716 | INFO     | [payload] run_realtimelog thread has finished
[2025-06-04 11:15:07] 2025-06-04 15:15:02,436 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140524204853056)>', '<ExcThread(monitor, started 140523402684160)>']
[2025-06-04 11:15:07] 2025-06-04 15:15:03,437 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-06-04 11:15:07] 2025-06-04 15:15:03,438 | INFO     | [monitor] control thread has ended
[2025-06-04 11:15:07] 2025-06-04 15:15:07,461 | INFO     | all workflow threads have been joined
[2025-06-04 11:15:07] 2025-06-04 15:15:07,462 | INFO     | end of generic workflow (traces error code: 0)
[2025-06-04 11:15:07] 2025-06-04 15:15:07,462 | INFO     | traces error code: 0
[2025-06-04 11:15:07] 2025-06-04 15:15:07,462 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-06-04 11:15:07] 2025-06-04 15:15:07,585 [wrapper] ==== pilot stdout END ====
[2025-06-04 11:15:07] 2025-06-04 15:15:07,588 [wrapper] ==== wrapper stdout RESUME ====
[2025-06-04 11:15:07] 2025-06-04 15:15:07,590 [wrapper] pilotpid: 3058150
[2025-06-04 11:15:07] 2025-06-04 15:15:07,593 [wrapper] Pilot exit status: 0
[2025-06-04 11:15:07] 2025-06-04 15:15:07,601 [wrapper] pandaids: 6679691322
[2025-06-04 11:15:07] 2025-06-04 15:15:07,663 [wrapper] cleanup supervisor_pilot 3283983 3058151
[2025-06-04 11:15:07] 2025-06-04 15:15:07,666 [wrapper] Test setup, not cleaning
[2025-06-04 11:15:07] 2025-06-04 15:15:07,668 [wrapper] apfmon messages muted
[2025-06-04 11:15:07] 2025-06-04 15:15:07,671 [wrapper] ==== wrapper stdout END ====
[2025-06-04 11:15:07] 2025-06-04 15:15:07,673 [wrapper] ==== wrapper stderr END ====
[2025-06-04 11:15:07]  *** Error codes and diagnostics ***
[2025-06-04 11:15:07]     "exeErrorCode": 0,
[2025-06-04 11:15:07]     "exeErrorDiag": "",
[2025-06-04 11:15:07]     "pilotErrorCode": 0,
[2025-06-04 11:15:07]     "pilotErrorDiag": "",
[2025-06-04 11:15:07]  *** Listing of results directory ***
[2025-06-04 11:15:07] total 406652
[2025-06-04 11:15:07] -rw-r--r--. 1 boincer umatlas    495897 Jun  4 08:18 pilot3.tar.gz
[2025-06-04 11:15:07] -rw-r--r--. 1 boincer umatlas      5111 Jun  4 08:31 queuedata.json
[2025-06-04 11:15:07] -rwx------. 1 boincer umatlas     37140 Jun  4 08:33 runpilot2-wrapper.sh
[2025-06-04 11:15:07] -rw-r--r--. 1 boincer umatlas       100 Jun  4 10:04 wrapper_26015_x86_64-pc-linux-gnu
[2025-06-04 11:15:07] -rwxr-xr-x. 1 boincer umatlas      7986 Jun  4 10:04 run_atlas
[2025-06-04 11:15:07] -rw-r--r--. 1 boincer umatlas       105 Jun  4 10:04 job.xml
[2025-06-04 11:15:07] -rw-r--r--. 2 boincer umatlas 222514951 Jun  4 10:04 EVNT.44871834._001284.pool.root.1
[2025-06-04 11:15:07] -rw-r--r--. 2 boincer umatlas     15093 Jun  4 10:04 start_atlas.sh
[2025-06-04 11:15:07] drwxrwx--x. 2 boincer umatlas      4096 Jun  4 10:04 shared
[2025-06-04 11:15:07] -rw-r--r--. 2 boincer umatlas    508883 Jun  4 10:04 input.tar.gz
[2025-06-04 11:15:07] -rw-r--r--. 1 boincer umatlas         0 Jun  4 10:04 boinc_lockfile
[2025-06-04 11:15:07] -rw-r--r--. 1 boincer umatlas      2558 Jun  4 10:04 pandaJob.out
[2025-06-04 11:15:07] -rw-------. 1 boincer umatlas    986819 Jun  4 10:04 agis_schedconf.cvmfs.json
[2025-06-04 11:15:07] -rw-------. 1 boincer umatlas   1598969 Jun  4 10:04 agis_ddmendpoints.agis.ALL.json
[2025-06-04 11:15:07] drwx------. 4 boincer umatlas      4096 Jun  4 10:04 pilot3
[2025-06-04 11:15:07] -rw-r--r--. 1 boincer umatlas      6897 Jun  4 11:10 init_data.xml
[2025-06-04 11:15:07] -rw-r--r--. 1 boincer umatlas       530 Jun  4 11:14 boinc_task_state.xml
[2025-06-04 11:15:07] -rw-------. 1 boincer umatlas 188563459 Jun  4 11:14 HITS.44871837._102215.pool.root.1
[2025-06-04 11:15:07] -rw-------. 1 boincer umatlas        95 Jun  4 11:14 pilot_heartbeat.json
[2025-06-04 11:15:07] -rw-------. 1 boincer umatlas      1024 Jun  4 11:14 memory_monitor_summary.json
[2025-06-04 11:15:07] -rw-------. 1 boincer umatlas    323247 Jun  4 11:14 log.44871837._102215.job.log.tgz.1
[2025-06-04 11:15:07] -rw-------. 1 boincer umatlas      7686 Jun  4 11:14 heartbeat.json
[2025-06-04 11:15:07] -rw-r--r--. 1 boincer umatlas        27 Jun  4 11:15 wrapper_checkpoint.txt
[2025-06-04 11:15:07] -rw-r--r--. 1 boincer umatlas      8192 Jun  4 11:15 boinc_mmap_file
[2025-06-04 11:15:07] -rw-------. 1 boincer umatlas      4548 Jun  4 11:15 pilotlog.txt
[2025-06-04 11:15:07] -rw-------. 1 boincer umatlas    426829 Jun  4 11:15 log.44871837._102215.job.log.1
[2025-06-04 11:15:07] -rw-------. 1 boincer umatlas       357 Jun  4 11:15 output.list
[2025-06-04 11:15:07] -rw-r--r--. 1 boincer umatlas       620 Jun  4 11:15 runtime_log
[2025-06-04 11:15:07] -rw-------. 1 boincer umatlas    768000 Jun  4 11:15 result.tar.gz
[2025-06-04 11:15:07] -rw-r--r--. 1 boincer umatlas      8659 Jun  4 11:15 runtime_log.err
[2025-06-04 11:15:07] -rw-------. 1 boincer umatlas       650 Jun  4 11:15 KrFODmBU2g7nsSi4ap6QjLDmwznN0nGgGQJmUXzaDmoynKDmmQfZLo.diag
[2025-06-04 11:15:07] -rw-r--r--. 1 boincer umatlas     21201 Jun  4 11:15 stderr.txt
[2025-06-04 11:15:07] HITS file was successfully produced:
[2025-06-04 11:15:07] -rw-------. 1 boincer umatlas 188563459 Jun  4 11:14 shared/HITS.pool.root.1
[2025-06-04 11:15:07]  *** Contents of shared directory: ***
[2025-06-04 11:15:07] total 402724
[2025-06-04 11:15:07] -rw-r--r--. 2 boincer umatlas 222514951 Jun  4 10:04 ATLAS.root_0
[2025-06-04 11:15:07] -rw-r--r--. 2 boincer umatlas     15093 Jun  4 10:04 start_atlas.sh
[2025-06-04 11:15:07] -rw-r--r--. 2 boincer umatlas    508883 Jun  4 10:04 input.tar.gz
[2025-06-04 11:15:07] -rw-------. 1 boincer umatlas 188563459 Jun  4 11:14 HITS.pool.root.1
[2025-06-04 11:15:07] -rw-------. 1 boincer umatlas    768000 Jun  4 11:15 result.tar.gz
11:15:09 (3052422): run_atlas exited; CPU time 28818.752601
11:15:09 (3052422): called boinc_finish(0)

</stderr_txt>
]]>

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